A0A024RB15_HUMAN Loading...

60S ribosomal protein L41

AlphaFold DB (Q5RFG9), UniProt , Accession A0A024RB15, Species HUMAN (Homo sapiens, Human), Gene RPL41, Length 25 aa.

						>A0A024RB15_HUMAN|A0A024RB15|RPL41
MRAKWRKKRMRRLKRKRRKMRQRSK
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	66.2	Low	91.6	Very high	200 Å²	200	147.3 Å²	147.3	99%	0.985	64%	0.641	S	S	*	*				0	131.6	0	-80.4	-163.6	-122	0	0	110.5	A3	M1-A3 PolarHBondContact O-N 3.31Å
2	R	84.2	Confident	92.2	Very high	188 Å²	188	148.8 Å²	148.8	71%	0.709	64%	0.64	S	S	*	*			trans	-53.1	123.8	177.7	-137.6	172.9	179.3	170.4	-1.1	110.4	K4 W5 R6	R2-K4 PolarHBondContact O-N 3.15Å; R2-W5 WeakPolarHBondContact O-CB 3.48Å; R2-W5 HydrophobicContact CB-CG 4.28Å; R2-W5 PolarHBondContact O-N 3.27Å; R2-R6 PolarHBondContact O-N 3.03Å
3	A	90.8	Very high	92.6	Very high	82 Å²	82	143.2 Å²	143.2	68%	0.678	62%	0.622	S	S	*	*	H	α-helix	trans	-51.8	-35.1	-176.1	0	0	0	0	0	113.3	M1 W5 R6 K7	M1-A3 PolarHBondContact O-N 3.31Å; A3-W5 VanDerWaalsContact C-N 3.34Å; A3-W5 PolarHBondContact O-N 3.23Å; A3-R6 PolarHBondContact O-N 2.95Å; A3-K7 PolarHBondContact O-N 3.28Å
4	K	93.9	Very high	93	Very high	164 Å²	164	142.6 Å²	142.6	71%	0.713	62%	0.619	S	S	*	*	H	α-helix	trans	-55.2	-43.9	173.6	-169.5	176.4	-176	176.5	0	112.7	R2 K7 K8	R2-K4 PolarHBondContact O-N 3.15Å; K4-K7 PolarHBondContact O-N 3.09Å; K4-K8 PolarHBondContact O-N 3Å
5	W	93.4	Very high	93.4	Very high	147 Å²	147	145.7 Å²	145.7	56%	0.557	63%	0.625	S	S	*	*	H	α-helix	trans	-70.1	-39.6	179.1	-62.8	126.9	0	0	0	111.8	R2 A3 K7 K8 R9	R2-W5 WeakPolarHBondContact O-CB 3.48Å; R2-W5 HydrophobicContact CB-CG 4.28Å; R2-W5 PolarHBondContact O-N 3.27Å; A3-W5 VanDerWaalsContact C-N 3.34Å; A3-W5 PolarHBondContact O-N 3.23Å; W5-K7 PolarHBondContact O-N 3.34Å; W5-K8 HydrophobicContact CE3-CD 4.22Å; W5-K8 HydrophobicContact CZ3-CD 4.11Å; W5-K8 PolarHBondContact O-N 3.32Å; W5-R9 PolarHBondContact O-N 3.34Å
6	R	95.3	Very high	93.7	Very high	183 Å²	183	146 Å²	146	69%	0.691	63%	0.627	S	S	*	*	H	α-helix	trans	-60.5	-45.2	173.9	-165.1	176.1	-177.5	-175.2	-1.1	110.9	R2 A3 K8 R9 M10	R2-R6 PolarHBondContact O-N 3.03Å; A3-R6 PolarHBondContact O-N 2.95Å; R6-K8 PolarHBondContact O-N 3.04Å; R6-R9 PolarHBondContact O-N 2.94Å; R6-M10 WeakPolarHBondContact O-CG 3.49Å; R6-M10 PolarHBondContact O-N 3.08Å
7	K	96.4	Very high	93.9	Very high	131 Å²	131	147.9 Å²	147.9	57%	0.57	63%	0.63	S	S	*	*	H	α-helix	trans	-61.6	-41.9	175.4	-166.9	172.5	-174.6	172.8	0	112	A3 K4 W5 M10 R11	A3-K7 PolarHBondContact O-N 3.28Å; K4-K7 PolarHBondContact O-N 3.09Å; W5-K7 PolarHBondContact O-N 3.34Å; K7-M10 PolarHBondContact O-N 3.38Å; K7-R11 WeakPolarHBondContact O-CG 3.43Å; K7-R11 PolarHBondContact O-N 3Å
8	K	96.6	Very high	94.2	Very high	100 Å²	100	149.7 Å²	149.7	44%	0.435	63%	0.633	S	S	.	*	H	α-helix	trans	-64.2	-43.3	176.2	-167.1	173.3	-177.1	176.5	0	111.9	K4 W5 R6 R11 R12	K4-K8 PolarHBondContact O-N 3Å; W5-K8 HydrophobicContact CE3-CD 4.22Å; W5-K8 HydrophobicContact CZ3-CD 4.11Å; W5-K8 PolarHBondContact O-N 3.32Å; R6-K8 PolarHBondContact O-N 3.04Å; K8-R11 PolarHBondContact O-N 3.43Å; K8-R12 PolarHBondContact O-N 2.97Å
9	R	96.8	Very high	94.4	Very high	169 Å²	169	149.4 Å²	149.4	64%	0.638	63%	0.632	S	S	*	*	H	α-helix	trans	-60.9	-46	175.6	-171.1	176	-179.9	174.5	2.4	111.4	W5 R6 R11 R12 L13	W5-R9 PolarHBondContact O-N 3.34Å; R6-R9 PolarHBondContact O-N 2.94Å; R9-R11 PolarHBondContact O-N 3.22Å; R9-R12 PolarHBondContact O-N 3.3Å; R9-L13 PolarHBondContact O-N 3.32Å
10	M	96.7	Very high	94.6	Very high	99 Å²	99	147.8 Å²	147.8	49%	0.488	63%	0.629	S	S	.	*	H	α-helix	trans	-63.1	-39.7	176.5	-68.8	-57.3	-72.8	0	0	112.7	R6 K7 R12 L13 K14	R6-M10 WeakPolarHBondContact O-CG 3.49Å; R6-M10 PolarHBondContact O-N 3.08Å; K7-M10 PolarHBondContact O-N 3.38Å; M10-R12 PolarHBondContact O-N 3.05Å; M10-L13 PolarHBondContact O-N 3.34Å; M10-L13 HydrophobicContact SD-CD1 4.14Å; M10-K14 WeakPolarHBondContact O-CG 3.4Å; M10-K14 PolarHBondContact O-N 3.39Å
11	R	97.7	Very high	94.7	Very high	157 Å²	157	149.6 Å²	149.6	59%	0.592	63%	0.633	S	S	*	*	H	α-helix	trans	-61	-42.5	173.8	-77.1	179.4	176	-179.5	-2.4	112.1	K7 K8 R9 K14 R15	K7-R11 WeakPolarHBondContact O-CG 3.43Å; K7-R11 PolarHBondContact O-N 3Å; K8-R11 PolarHBondContact O-N 3.43Å; R9-R11 PolarHBondContact O-N 3.22Å; R11-K14 PolarHBondContact O-N 3.4Å; R11-R15 WeakPolarHBondContact O-CG 3.49Å; R11-R15 PolarHBondContact O-N 3.22Å
12	R	97.9	Very high	96.2	Very high	165 Å²	165	146.8 Å²	146.8	62%	0.623	62%	0.617	S	S	*	*	H	α-helix	trans	-62.9	-43.6	175.7	-72.1	-179.4	174.7	177.1	-3.2	111.9	K8 R9 M10 R15 K16	K8-R12 PolarHBondContact O-N 2.97Å; R9-R12 PolarHBondContact O-N 3.3Å; M10-R12 PolarHBondContact O-N 3.05Å; R12-R15 PolarHBondContact O-N 3.47Å; R12-K16 PolarHBondContact O-N 3.01Å
13	L	98.1	Very high	96.8	Very high	77 Å²	77	148.2 Å²	148.2	40%	0.403	62%	0.623	S	S	.	*	H	α-helix	trans	-60.9	-48.1	175.8	-81.1	166.6	0	0	0	112.2	R9 M10 R15 K16 R17	R9-L13 PolarHBondContact O-N 3.32Å; M10-L13 PolarHBondContact O-N 3.34Å; M10-L13 HydrophobicContact SD-CD1 4.14Å; L13-R15 VanDerWaalsContact C-N 3.31Å; L13-R15 PolarHBondContact O-N 3.46Å; L13-K16 PolarHBondContact O-N 3.39Å; L13-R17 PolarHBondContact O-N 2.86Å
14	K	98.2	Very high	97	Very high	134 Å²	134	149.4 Å²	149.4	58%	0.583	63%	0.626	S	S	*	*	H	α-helix	trans	-59.4	-40.5	176.6	-72.8	-172.4	178.5	-171.1	0	111.9	M10 R11 R17 R18	M10-K14 WeakPolarHBondContact O-CG 3.4Å; M10-K14 PolarHBondContact O-N 3.39Å; R11-K14 PolarHBondContact O-N 3.4Å; K14-R17 PolarHBondContact O-N 3.01Å; K14-R18 WeakPolarHBondContact O-CG 3.43Å; K14-R18 PolarHBondContact O-N 3.49Å
15	R	98.4	Very high	96.8	Very high	189 Å²	189	151.7 Å²	151.7	71%	0.713	64%	0.636	S	S	*	*	H	α-helix	trans	-62.8	-44.3	175.3	-78	-176.3	177.6	-178.7	-2	112.6	R11 R12 L13 R18 K19	R11-R15 WeakPolarHBondContact O-CG 3.49Å; R11-R15 PolarHBondContact O-N 3.22Å; R12-R15 PolarHBondContact O-N 3.47Å; L13-R15 VanDerWaalsContact C-N 3.31Å; L13-R15 PolarHBondContact O-N 3.46Å; R15-R18 PolarHBondContact O-N 2.96Å; R15-K19 PolarHBondContact O-N 2.95Å; R15-K19 VanDerWaalsContact O-N 3.08Å
16	K	98.2	Very high	96.9	Very high	151 Å²	151	152 Å²	152	66%	0.657	64%	0.64	S	S	*	*	H	α-helix	trans	-59.4	-47.9	175.2	-77.4	-170.3	173.9	-169.9	0	111.5	R12 L13 R18 K19 M20	R12-K16 PolarHBondContact O-N 3.01Å; L13-K16 PolarHBondContact O-N 3.39Å; K16-R18 VanDerWaalsContact C-N 3.34Å; K16-R18 PolarHBondContact O-N 2.98Å; K16-K19 PolarHBondContact O-N 3.44Å; K16-M20 PolarHBondContact O-N 2.93Å; K16-M20 WeakPolarHBondContact O-CG 3.35Å
17	R	98.3	Very high	97	Very high	178 Å²	178	150.3 Å²	150.3	67%	0.672	64%	0.638	S	S	*	*	H	α-helix	trans	-60.2	-40.5	177.3	-70.8	-176.2	-177.9	176.8	-0.2	112.7	L13 K14 M20 R21	L13-R17 PolarHBondContact O-N 2.86Å; K14-R17 PolarHBondContact O-N 3.01Å; R17-M20 HydrophobicContact CG-CE 4.42Å; R17-M20 PolarHBondContact O-N 3.25Å; R17-R21 WeakPolarHBondContact O-CB 3.47Å; R17-R21 PolarHBondContact O-N 3.31Å
18	R	98	Very high	97.1	Very high	181 Å²	181	151.4 Å²	151.4	68%	0.683	64%	0.641	S	S	*	*	H	α-helix	trans	-61.2	-45.4	175.1	-76.4	-178.3	-177.5	179.3	-1.9	112.1	K14 R15 K16 R21 Q22	K14-R18 WeakPolarHBondContact O-CG 3.43Å; K14-R18 PolarHBondContact O-N 3.49Å; R15-R18 PolarHBondContact O-N 2.96Å; K16-R18 VanDerWaalsContact C-N 3.34Å; K16-R18 PolarHBondContact O-N 2.98Å; R18-R21 PolarHBondContact O-N 2.89Å; R18-Q22 WeakPolarHBondContact O-CG 3.4Å; R18-Q22 PolarHBondContact O-N 3.46Å
19	K	98.1	Very high	97.1	Very high	143 Å²	143	154.4 Å²	154.4	62%	0.622	65%	0.653	S	S	*	*	H	α-helix	trans	-61.6	-43.3	176.2	-74.5	-172	173.2	-167.3	0	112.4	R15 K16 Q22 R23	R15-K19 PolarHBondContact O-N 2.95Å; R15-K19 VanDerWaalsContact O-N 3.08Å; K16-K19 PolarHBondContact O-N 3.44Å; K19-Q22 PolarHBondContact O-N 3.25Å; K19-R23 PolarHBondContact O-N 3.05Å; K19-R23 VanDerWaalsContact O-N 3.15Å
20	M	98.1	Very high	97.1	Very high	117 Å²	117	153.5 Å²	153.5	58%	0.576	65%	0.654	S	S	*	*	H	α-helix	trans	-62.9	-46	176.3	-65.9	-168.6	-51.1	0	0	111.2	K16 R17 Q22 R23 S24	K16-M20 PolarHBondContact O-N 2.93Å; K16-M20 WeakPolarHBondContact O-CG 3.35Å; R17-M20 HydrophobicContact CG-CE 4.42Å; R17-M20 PolarHBondContact O-N 3.25Å; M20-Q22 PolarHBondContact O-N 3.44Å; M20-R23 PolarHBondContact O-N 3.48Å; M20-S24 PolarHBondContact O-N 2.96Å; M20-S24 VanDerWaalsContact O-N 3.09Å; M20-S24 PolarHBondContact O-OG 3.35Å
21	R	97.8	Very high	97.1	Very high	186 Å²	186	157.1 Å²	157.1	70%	0.702	67%	0.666	S	S	*	*	H	α-helix	trans	-62.2	-31.2	177.2	-167.8	174.7	-174.5	-176.1	1.6	113.1	R17 R18 K25	R17-R21 WeakPolarHBondContact O-CB 3.47Å; R17-R21 PolarHBondContact O-N 3.31Å; R18-R21 PolarHBondContact O-N 2.89Å; R21-K25 PolarHBondContact O-N 3.26Å
22	Q	97.4	Very high	97.1	Very high	141 Å²	141	157.1 Å²	157.1	66%	0.659	67%	0.671	S	S	*	*	H	α-helix	trans	-71.8	-27.4	173.4	-79.3	177.2	-29.4	0	0	113.3	R18 K19 M20 K25	R18-Q22 WeakPolarHBondContact O-CG 3.4Å; R18-Q22 PolarHBondContact O-N 3.46Å; K19-Q22 PolarHBondContact O-N 3.25Å; M20-Q22 PolarHBondContact O-N 3.44Å; Q22-K25 VanDerWaalsContact O-OXT 3.1Å
23	R	97.1	Very high	97	Very high	218 Å²	218	156.5 Å²	156.5	82%	0.823	68%	0.675	S	S	*	*	H	α-helix	trans	-80.6	-27.6	175.6	-71.1	179	175.5	-175.3	-5.7	112.9	K19 M20	K19-R23 PolarHBondContact O-N 3.05Å; K19-R23 VanDerWaalsContact O-N 3.15Å; M20-R23 PolarHBondContact O-N 3.48Å
24	S	95	Very high	96.9	Very high	108 Å²	108	163.2 Å²	163.2	76%	0.755	70%	0.697	S	S	*	*			trans	-83.9	-14.1	176.7	-55.3	0	0	0	0	113.3	M20	M20-S24 PolarHBondContact O-N 2.96Å; M20-S24 VanDerWaalsContact O-N 3.09Å; M20-S24 PolarHBondContact O-OG 3.35Å
25	K	88.9	Confident	96.8	Very high	212 Å²	212	165.8 Å²	165.8	92%	0.922	71%	0.708	S	S	*	*			trans	-88.6	0	166.7	-78.9	-170.4	171.3	-159.6	0	108.3	R21 Q22	R21-K25 PolarHBondContact O-N 3.26Å; Q22-K25 VanDerWaalsContact O-OXT 3.1Å

Retrieved 25 of 25 residues in 72.5 ms (Link to these results)

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