A0A060X1L8_ONCMY Loading...

Rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma

Participates in processes of transmission and amplification of the visual signal. cGMP-PDEs are the effector molecules in G-protein-mediated phototransduction in vertebrate rods and cones.

AlphaFold DB (A0A4W5JWV7), UniProt , Accession A0A060X1L8, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene LOC110538323, Length 87 aa.

						>A0A060X1L8_ONCMY|A0A060X1L8|LOC110538323
MNTAPPAGSALATPAGTAGPTTPKKGPPKFKQRQTRTFKSKAPKPGQKGFGDDIPGMEGLGTDIAVVCPWEAYGDMELSDLAKYGII
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	60.8	Low	58.3	Low	245 Å²	245	131.8 Å²	131.8	100%	1.207	86%	0.859	S	S	*	*				0	109.8	0	-71.5	171.5	-178.5	0	0	108.3
2	N	60.5	Low	57.5	Low	167 Å²	167	128.3 Å²	128.3	89%	0.893	85%	0.848	S	S	*	*			trans	-160.7	127.4	144.8	-133.3	-35	0	0	0	108.5
3	T	67.6	Low	57.3	Low	129 Å²	129	128.9 Å²	128.9	79%	0.791	85%	0.848	S	S	*	*			trans	-116.1	124.3	-165	40.8	0	0	0	0	109.4
4	A	59	Low	56.7	Low	94 Å²	94	128.8 Å²	128.8	78%	0.777	85%	0.846	S	S	*	*			trans	-156.5	112.5	154.5	0	0	0	0	0	109.7
5	P	60.6	Low	56.7	Low	114 Å²	114	127.1 Å²	127.1	74%	0.74	85%	0.847	S	S	*	*			trans	-77.1	141.2	162.2	30.9	-29.6	0	0	0	109.4	A7	P5-A7 PolarHBondContact O-N 3.16Å; P5-A7 VanDerWaalsContact O-N 3.16Å
6	P	65.6	Low	56.2	Low	137 Å²	137	123.5 Å²	123.5	89%	0.89	84%	0.839	S	S	*	*			trans	-68	115.3	172.1	27.7	-31.5	0	0	0	109.1
7	A	56.6	Low	55.7	Low	107 Å²	107	124.2 Å²	124.2	88%	0.884	84%	0.838	S	S	*	*			trans	-94	137	171.7	0	0	0	0	0	110.4	P5	P5-A7 PolarHBondContact O-N 3.16Å; P5-A7 VanDerWaalsContact O-N 3.16Å
8	G	51	Low	55.7	Low	68 Å²	68	122.5 Å²	122.5	70%	0.701	83%	0.834	S	S	*	*			trans	144.4	67.8	168.4	0	0	0	0	0	112.4
9	S	50.4	Low	55.6	Low	115 Å²	115	118.5 Å²	118.5	80%	0.804	82%	0.816	S	S	*	*				68.4	91.3	98.2	-68.9	0	0	0	0	114.3	L11	S9-L11 PolarHBondContact O-N 3.25Å
10	A	55.2	Low	55.2	Low	107 Å²	107	119.7 Å²	119.7	88%	0.884	82%	0.821	S	S	*	*			trans	-73	102.6	164.1	0	0	0	0	0	109.3
11	L	53.8	Low	55.3	Low	167 Å²	167	120 Å²	120	87%	0.874	82%	0.819	S	S	*	*			trans	-82.3	122.5	161.3	-114.2	97.6	0	0	0	108.7	S9	S9-L11 PolarHBondContact O-N 3.25Å
12	A	48.5	Very low	55.4	Low	89 Å²	89	113.1 Å²	113.1	74%	0.736	79%	0.791	S	S	*	*			trans	65.6	96.7	167.6	0	0	0	0	0	117.6	P14	A12-P14 WeakPolarHBondContact O-CD 3.34Å
13	T	55.5	Low	55.4	Low	137 Å²	137	111.6 Å²	111.6	84%	0.84	79%	0.79	S	S	*	*			trans	-66.1	116.9	153	28.1	0	0	0	0	109.6	A15	T13-A15 PolarHBondContact O-N 3.18Å
14	P	48.9	Very low	55.3	Low	127 Å²	127	114.1 Å²	114.1	83%	0.825	79%	0.79	S	S	*	*			trans	-68.8	117.1	163.3	27	-28.4	0	0	0	107.5	A12 G16	A12-P14 WeakPolarHBondContact O-CD 3.34Å; P14-G16 VanDerWaalsContact C-N 3.27Å; P14-G16 PolarHBondContact O-N 2.84Å
15	A	56.1	Low	55.5	Low	104 Å²	104	119.3 Å²	119.3	86%	0.86	80%	0.795	S	S	*	*			trans	-65.7	86.6	175.2	0	0	0	0	0	109.8	T13	T13-A15 PolarHBondContact O-N 3.18Å
16	G	49.2	Very low	55.8	Low	69 Å²	69	116.4 Å²	116.4	71%	0.711	79%	0.785	S	S	*	*			trans	-125	72.5	167.3	0	0	0	0	0	108.1	P14 A18	P14-G16 VanDerWaalsContact C-N 3.27Å; P14-G16 PolarHBondContact O-N 2.84Å; G16-A18 PolarHBondContact O-N 2.95Å
17	T	47.7	Very low	56.3	Low	136 Å²	136	115.6 Å²	115.6	83%	0.834	78%	0.78	S	S	*	*			trans	-40.8	123.8	176.4	-52.9	0	0	0	0	110.8	G19	T17-G19 PolarHBondContact O-N 3.26Å
18	A	56.4	Low	57.2	Low	93 Å²	93	116.5 Å²	116.5	77%	0.769	78%	0.777	S	S	*	*			trans	-39.2	105	171.3	0	0	0	0	0	111.4	G16	G16-A18 PolarHBondContact O-N 2.95Å
19	G	52.9	Low	58.2	Low	46 Å²	46	122.5 Å²	122.5	47%	0.474	78%	0.784	S	S	.	*			trans	-64.7	162.1	159.3	0	0	0	0	0	109.7	T17 T21	T17-G19 PolarHBondContact O-N 3.26Å; G19-T21 PolarHBondContact O-N 2.82Å
20	P	47.6	Very low	59.3	Low	142 Å²	142	126.3 Å²	126.3	92%	0.922	79%	0.786	S	S	*	*			trans	-64	98.4	-176.6	25.6	-32.6	0	0	0	110.5	T22	P20-T22 PolarHBondContact O-N 3.26Å
21	T	58.1	Low	60.2	Low	127 Å²	127	130.1 Å²	130.1	78%	0.779	78%	0.783	S	S	*	*			trans	-80.6	113.3	171.3	59.1	0	0	0	0	107.9	G19	G19-T21 PolarHBondContact O-N 2.82Å
22	T	63.1	Low	61.1	Low	100 Å²	100	130.8 Å²	130.8	61%	0.613	78%	0.781	S	S	*	*			trans	-59.4	146.8	166.5	53.3	0	0	0	0	109.1	P20 K24	P20-T22 PolarHBondContact O-N 3.26Å; T22-K24 PolarHBondContact O-N 3.46Å
23	P	59.8	Low	62.4	Low	135 Å²	135	137.9 Å²	137.9	88%	0.877	79%	0.789	S	S	*	*			trans	-70.6	82.1	-177.2	28	-32.9	0	0	0	109.5	K25	P23-K25 PolarHBondContact O-N 2.79Å
24	K	64.5	Low	62.8	Low	183 Å²	183	139.9 Å²	139.9	80%	0.796	79%	0.789	S	S	*	*			trans	-74.4	115.4	166.9	-76	-178.1	178.7	166.8	0	106.1	T22 G26	T22-K24 PolarHBondContact O-N 3.46Å; K24-G26 PolarHBondContact O-N 3.42Å
25	K	64.5	Low	63.4	Low	203 Å²	203	139.8 Å²	139.8	88%	0.883	79%	0.787	S	S	*	*			trans	-15.5	116.1	171.8	-163.8	174.3	-169.8	174.9	0	110.6	P23	P23-K25 PolarHBondContact O-N 2.79Å
26	G	67.3	Low	63.8	Low	52 Å²	52	146 Å²	146	54%	0.536	79%	0.788	S	S	.	*			trans	-49.7	165.4	178	0	0	0	0	0	112	K24	K24-G26 PolarHBondContact O-N 3.42Å
27	P	74.5	Confident	64.6	Low	121 Å²	121	148.2 Å²	148.2	79%	0.786	79%	0.787	S	S	*	*	S	Bend	trans	-41.6	130.9	-169.4	-29.6	33.2	0	0	0	111.8	K29	P27-K29 PolarHBondContact O-N 3.49Å; P27-K29 VanDerWaalsContact O-N 3.09Å
28	P	75.4	Confident	64.9	Low	126 Å²	126	150.5 Å²	150.5	82%	0.818	79%	0.786	S	S	*	*			trans	-50.2	123.6	-175.8	-26.3	32.9	0	0	0	110.2	F30	P28-F30 PolarHBondContact O-N 2.87Å
29	K	73.3	Confident	65.2	Low	193 Å²	193	155.5 Å²	155.5	84%	0.839	79%	0.791	S	S	*	*			trans	-58	116.4	174.9	-101.4	168.4	175.3	163.4	0	108.2	P27 K31	P27-K29 PolarHBondContact O-N 3.49Å; P27-K29 VanDerWaalsContact O-N 3.09Å; K29-K31 PolarHBondContact O-N 3.23Å
30	F	73.5	Confident	65.4	Low	196 Å²	196	157 Å²	157	86%	0.86	79%	0.794	S	S	*	*			trans	-57.7	111.3	176.1	-176.6	-103.6	0	0	0	108.7	P28	P28-F30 PolarHBondContact O-N 2.87Å
31	K	73.4	Confident	65.8	Low	187 Å²	187	160.2 Å²	160.2	81%	0.813	79%	0.794	S	S	*	*			trans	-96.7	117.6	172.9	-73.2	-177.6	-179.9	-177	0	107.4	K29 R33	K29-K31 PolarHBondContact O-N 3.23Å; K31-R33 PolarHBondContact O-N 3.38Å; K31-R33 VanDerWaalsContact O-N 3.12Å
32	Q	72.8	Confident	65.6	Low	180 Å²	180	158.6 Å²	158.6	84%	0.841	79%	0.793	S	S	*	*			trans	-59.5	115.2	171.7	-175.1	175.7	-2.8	0	0	108.9
33	R	75.2	Confident	65.1	Low	238 Å²	238	158.8 Å²	158.8	90%	0.898	80%	0.796	S	S	*	*	P	Polyproline II helix	trans	-70.2	132	178.9	-178.8	178	-102.5	-159.6	-3.9	109	K31	K31-R33 PolarHBondContact O-N 3.38Å; K31-R33 VanDerWaalsContact O-N 3.12Å
34	Q	64.6	Low	64.7	Low	179 Å²	179	160.9 Å²	160.9	84%	0.836	79%	0.791	S	S	*	*	P	Polyproline II helix	trans	-67.2	133.6	175	-163.9	175.2	25.5	0	0	110.1
35	T	62.3	Low	64.2	Low	126 Å²	126	158.7 Å²	158.7	77%	0.773	80%	0.795	S	S	*	*	P	Polyproline II helix	trans	-69.2	129.3	179.3	-174.2	0	0	0	0	110.8
36	R	64.5	Low	63.8	Low	234 Å²	234	153.1 Å²	153.1	88%	0.883	80%	0.796	S	S	*	*			trans	-102.6	113.3	171.8	-68.8	178.8	71.6	-147.5	3.7	107.4	F38	R36-F38 PolarHBondContact O-N 3.21Å
37	T	64.5	Low	63.2	Low	115 Å²	115	157.9 Å²	157.9	71%	0.706	80%	0.804	S	S	*	*			trans	-66.9	121.2	174.7	18.4	0	0	0	0	110.2	K39	T37-K39 PolarHBondContact O-N 3.29Å; T37-K39 VanDerWaalsContact O-N 3.1Å
38	F	55.9	Low	62.4	Low	185 Å²	185	162.5 Å²	162.5	81%	0.811	81%	0.812	S	S	*	*			trans	-69.1	102.7	177.8	-176.3	-110.2	0	0	0	109.3	R36 S40	R36-F38 PolarHBondContact O-N 3.21Å; F38-S40 WeakPolarHBondContact CE1-OG 3.4Å
39	K	61.6	Low	61.4	Low	197 Å²	197	158.8 Å²	158.8	86%	0.857	80%	0.796	S	S	*	*			trans	-92.7	93.4	176.3	-75.5	169	176.5	170.9	0	108.8	T37	T37-K39 PolarHBondContact O-N 3.29Å; T37-K39 VanDerWaalsContact O-N 3.1Å
40	S	57.3	Low	60.5	Low	79 Å²	79	154.6 Å²	154.6	55%	0.552	78%	0.778	S	S	*	*			trans	-124.3	140.5	168.7	65.8	0	0	0	0	111.9	F38	F38-S40 WeakPolarHBondContact CE1-OG 3.4Å
41	K	55.9	Low	59.3	Low	209 Å²	209	148.9 Å²	148.9	91%	0.909	78%	0.775	S	S	*	*	P	Polyproline II helix	trans	-70.7	163.5	172.8	-116.5	177.1	-179.9	176.7	0	111.4
42	A	53.4	Low	58.4	Low	92 Å²	92	147.1 Å²	147.1	76%	0.76	77%	0.774	S	S	*	*	P	Polyproline II helix	trans	-59.9	139.6	-172.7	0	0	0	0	0	114.4
43	P	52	Low	57.6	Low	104 Å²	104	144.9 Å²	144.9	68%	0.675	77%	0.768	S	S	*	*	P	Polyproline II helix	trans	-74.4	159.4	177.6	29	-31.9	0	0	0	112.7
44	K	52.3	Low	56.2	Low	179 Å²	179	137.2 Å²	137.2	78%	0.778	74%	0.744	S	S	*	*	P	Polyproline II helix	trans	-85	158.3	-176.3	-76.8	178.8	-178.9	167.1	0	112.9	G46	K44-G46 PolarHBondContact O-N 3.43Å
45	P	53.4	Low	55.9	Low	137 Å²	137	134.1 Å²	134.1	89%	0.89	74%	0.74	S	S	*	*	T	Hydrogen-bonded Turn	trans	-70.8	129.9	-166.3	-12.3	27.7	0	0	0	112.2
46	G	55.9	Low	55.7	Low	87 Å²	87	131.6 Å²	131.6	90%	0.897	74%	0.739	S	S	*	*	T	Hydrogen-bonded Turn	trans	110.7	-9.6	178.5	0	0	0	0	0	115.1	K44 K48	K44-G46 PolarHBondContact O-N 3.43Å; G46-K48 PolarHBondContact O-N 3.44Å
47	Q	54.7	Low	55	Low	151 Å²	151	125.1 Å²	125.1	71%	0.706	72%	0.719	S	S	*	*			trans	-78.7	104.9	167.1	-171.6	169.8	-30.3	0	0	108.4	G49	Q47-G49 PolarHBondContact O-N 2.87Å
48	K	58.3	Low	54.5	Low	219 Å²	219	125.3 Å²	125.3	95%	0.952	71%	0.712	S	S	*	*			trans	-70.8	75.4	171.5	-167.6	176.8	-177.8	-176.4	0	108.7	G46	G46-K48 PolarHBondContact O-N 3.44Å
49	G	53.9	Low	54.3	Low	47 Å²	47	118.2 Å²	118.2	49%	0.485	69%	0.692	S	S	.	*			trans	-98.5	142.1	171.8	0	0	0	0	0	110.5	Q47	Q47-G49 PolarHBondContact O-N 2.87Å
50	F	55.4	Low	53.8	Low	106 Å²	106	112 Å²	112	47%	0.465	67%	0.668	S	S	.	*			trans	29.3	83.9	171.5	-69.4	-66.3	0	0	0	117.8	D52 E58 G59 G61	F50-D52 PolarHBondContact O-N 3.48Å; F50-E58 WeakPolarHBondContact CD1-O 3.29Å; F50-E58 WeakPolarHBondContact CD2-O 3.37Å; F50-E58 WeakPolarHBondContact CE1-O 3.42Å; F50-E58 WeakPolarHBondContact CE2-O 2.95Å; F50-E58 VanDerWaalsContact CG-C 3.41Å; F50-E58 WeakPolarHBondContact CG-O 3.12Å; F50-G59 VanDerWaalsContact CD1-N 3.32Å; F50-G59 WeakPolarHBondContact CE1-O 3.11Å; F50-G59 WeakPolarHBondContact CZ-O 3.38Å; F50-G61 VanDerWaalsContact CE1-N 3.27Å
51	G	48.8	Very low	53.2	Low	76 Å²	76	110.3 Å²	110.3	78%	0.784	66%	0.662	S	S	*	*			trans	-67.4	113.5	162.3	0	0	0	0	0	110.6
52	D	53.3	Low	53	Low	149 Å²	149	106.5 Å²	106.5	80%	0.797	66%	0.657	S	S	*	*	S	Bend	trans	45.4	104.3	155.8	-91.1	-84.5	0	0	0	119.7	F50	F50-D52 PolarHBondContact O-N 3.48Å
53	D	56.8	Low	52.8	Low	134 Å²	134	107.1 Å²	107.1	72%	0.717	65%	0.647	S	S	*	*				87.2	53	129.4	-134.2	-7.7	0	0	0	118.4
54	I	46.2	Very low	52.7	Low	76 Å²	76	106.2 Å²	106.2	39%	0.39	64%	0.636	S	S	.	*			trans	-133.4	105.4	155.5	-53.2	-176.8	0	0	0	111.4	G56 M57 E58	I54-G56 PolarHBondContact O-N 3.42Å; I54-M57 HydrophobicContact CB-CB 3.68Å; I54-M57 HydrophobicContact CD1-CB 3.89Å; I54-M57 HydrophobicContact CD1-CE 3.8Å; I54-M57 HydrophobicContact CG1-CB 4.34Å; I54-M57 HydrophobicContact CG2-CB 3.41Å; I54-M57 VanDerWaalsContact CG2-CB 3.41Å; I54-M57 PolarHBondContact O-N 2.7Å; I54-E58 PolarHBondContact O-N 3.2Å; I54-E58 VanDerWaalsContact O-N 3.09Å
55	P	57.7	Low	52.4	Low	115 Å²	115	102 Å²	102	75%	0.747	63%	0.634	S	S	*	*	T	Hydrogen-bonded Turn	trans	-59	99.2	158.4	-13.7	27.8	0	0	0	108.7	E58	P55-E58 VanDerWaalsContact CA-OE1 3.29Å; P55-E58 WeakPolarHBondContact CA-OE1 3.18Å
56	G	57.8	Low	52.3	Low	73 Å²	73	100.7 Å²	100.7	75%	0.753	62%	0.624	S	S	*	*	T	Hydrogen-bonded Turn	trans	112.2	-2.4	-175.3	0	0	0	0	0	116.3	I54 E58	I54-G56 PolarHBondContact O-N 3.42Å; G56-E58 PolarHBondContact N-OE1 3.26Å
57	M	50.9	Low	52.3	Low	97 Å²	97	100.4 Å²	100.4	48%	0.478	61%	0.605	S	S	.	*	T	Hydrogen-bonded Turn	trans	-153.8	22.3	179	-149.8	143.9	64.6	0	0	115.2	I54 G59 L60	I54-M57 HydrophobicContact CB-CB 3.68Å; I54-M57 HydrophobicContact CD1-CB 3.89Å; I54-M57 HydrophobicContact CD1-CE 3.8Å; I54-M57 HydrophobicContact CG1-CB 4.34Å; I54-M57 HydrophobicContact CG2-CB 3.41Å; I54-M57 VanDerWaalsContact CG2-CB 3.41Å; I54-M57 PolarHBondContact O-N 2.7Å; M57-G59 PolarHBondContact O-N 3.09Å; M57-L60 HydrophobicContact CG-CB 4.3Å; M57-L60 HydrophobicContact CG-CD1 3.27Å; M57-L60 HydrophobicContact CG-CD2 4.39Å; M57-L60 HydrophobicContact CG-CG 3.44Å; M57-L60 VanDerWaalsContact CG-CG 3.44Å; M57-L60 HydrophobicContact SD-CD1 3.38Å; M57-L60 WeakPolarHBondContact SD-CD1 3.09Å; M57-L60 HydrophobicContact SD-CG 4.25Å
58	E	52.5	Low	52	Low	119 Å²	119	94.5 Å²	94.5	56%	0.556	58%	0.579	S	S	*	*	T	Hydrogen-bonded Turn	trans	-70.9	41.2	167.7	52.9	-141.1	129.3	0	0	113	F50 I54 P55 G56	F50-E58 WeakPolarHBondContact CD1-O 3.29Å; F50-E58 WeakPolarHBondContact CD2-O 3.37Å; F50-E58 WeakPolarHBondContact CE1-O 3.42Å; F50-E58 WeakPolarHBondContact CE2-O 2.95Å; F50-E58 VanDerWaalsContact CG-C 3.41Å; F50-E58 WeakPolarHBondContact CG-O 3.12Å; I54-E58 PolarHBondContact O-N 3.2Å; I54-E58 VanDerWaalsContact O-N 3.09Å; P55-E58 VanDerWaalsContact CA-OE1 3.29Å; P55-E58 WeakPolarHBondContact CA-OE1 3.18Å; G56-E58 PolarHBondContact N-OE1 3.26Å
59	G	52.1	Low	51.5	Low	37 Å²	37	87.7 Å²	87.7	38%	0.381	56%	0.557	S	S	.	*	T	Hydrogen-bonded Turn	trans	-137.7	-12.1	-175.2	0	0	0	0	0	114.3	F50 M57	F50-G59 VanDerWaalsContact CD1-N 3.32Å; F50-G59 WeakPolarHBondContact CE1-O 3.11Å; F50-G59 WeakPolarHBondContact CZ-O 3.38Å; M57-G59 PolarHBondContact O-N 3.09Å
60	L	50.5	Low	51.2	Low	67 Å²	67	94.3 Å²	94.3	35%	0.351	57%	0.568	S	S	.	*			trans	-112.5	61.2	-174	-40.9	-168	0	0	0	111.7	M57 T62 I64	M57-L60 HydrophobicContact CG-CB 4.3Å; M57-L60 HydrophobicContact CG-CD1 3.27Å; M57-L60 HydrophobicContact CG-CD2 4.39Å; M57-L60 HydrophobicContact CG-CG 3.44Å; M57-L60 VanDerWaalsContact CG-CG 3.44Å; M57-L60 HydrophobicContact SD-CD1 3.38Å; M57-L60 WeakPolarHBondContact SD-CD1 3.09Å; M57-L60 HydrophobicContact SD-CG 4.25Å; L60-T62 PolarHBondContact O-N 3.27Å; L60-I64 HydrophobicContact CB-CB 3.72Å; L60-I64 HydrophobicContact CB-CD1 4.22Å; L60-I64 HydrophobicContact CB-CG1 4.31Å; L60-I64 HydrophobicContact CD1-CB 3.72Å; L60-I64 HydrophobicContact CD1-CG2 3.7Å; L60-I64 HydrophobicContact CD2-CB 3.51Å; L60-I64 HydrophobicContact CD2-CD1 3.09Å; L60-I64 HydrophobicContact CD2-CG1 3.79Å; L60-I64 HydrophobicContact CD2-CG2 3.61Å; L60-I64 HydrophobicContact CG-CB 3.75Å; L60-I64 HydrophobicContact CG-CD1 4.07Å; L60-I64 HydrophobicContact CG-CG1 4.4Å; L60-I64 HydrophobicContact CG-CG2 4.1Å
61	G	46.4	Very low	50.9	Low	43 Å²	43	95.8 Å²	95.8	44%	0.443	58%	0.576	S	S	.	*	S	Bend	trans	-65.7	105.5	174.7	0	0	0	0	0	106.3	F50 D63	F50-G61 VanDerWaalsContact CE1-N 3.27Å; G61-D63 PolarHBondContact O-N 3.26Å
62	T	51.8	Low	51	Low	128 Å²	128	95.2 Å²	95.2	79%	0.785	56%	0.564	S	S	*	*	S	Bend	trans	54.6	-12.3	174.1	54.3	0	0	0	0	119	L60	L60-T62 PolarHBondContact O-N 3.27Å
63	D	49	Very low	50.7	Low	105 Å²	105	97 Å²	97	56%	0.561	56%	0.561	S	S	*	*	S	Bend	trans	-120.1	-9.7	-164	-85.7	-5.8	0	0	0	117	G61 V66 V67	G61-D63 PolarHBondContact O-N 3.26Å; D63-V66 PolarHBondContact O-N 3.4Å; D63-V67 PolarHBondContact O-N 3.01Å; D63-V67 VanDerWaalsContact O-N 3.12Å
64	I	48.4	Very low	50.4	Low	85 Å²	85	93.2 Å²	93.2	44%	0.436	55%	0.554	S	S	.	*	T	Hydrogen-bonded Turn	trans	-96.2	-6.7	-179.1	-60.6	164	0	0	0	113.4	L60	L60-I64 HydrophobicContact CB-CB 3.72Å; L60-I64 HydrophobicContact CB-CD1 4.22Å; L60-I64 HydrophobicContact CB-CG1 4.31Å; L60-I64 HydrophobicContact CD1-CB 3.72Å; L60-I64 HydrophobicContact CD1-CG2 3.7Å; L60-I64 HydrophobicContact CD2-CB 3.51Å; L60-I64 HydrophobicContact CD2-CD1 3.09Å; L60-I64 HydrophobicContact CD2-CG1 3.79Å; L60-I64 HydrophobicContact CD2-CG2 3.61Å; L60-I64 HydrophobicContact CG-CB 3.75Å; L60-I64 HydrophobicContact CG-CD1 4.07Å; L60-I64 HydrophobicContact CG-CG1 4.4Å; L60-I64 HydrophobicContact CG-CG2 4.1Å
65	A	46.5	Very low	50.8	Low	91 Å²	91	97.1 Å²	97.1	75%	0.752	58%	0.576	S	S	*	*	T	Hydrogen-bonded Turn	trans	-87.5	-13	159.7	0	0	0	0	0	112.9
66	V	51.7	Low	50.5	Low	109 Å²	109	96 Å²	96	66%	0.661	56%	0.562	S	S	*	*	T	Hydrogen-bonded Turn	trans	-102	-25.3	-176.5	-176.6	0	0	0	0	112.1	D63	D63-V66 PolarHBondContact O-N 3.4Å
67	V	56.1	Low	50.4	Low	82 Å²	82	99.4 Å²	99.4	50%	0.497	56%	0.558	S	S	.	*	S	Bend	trans	-113	84.5	165.7	-172.4	0	0	0	0	108.4	D63 P69 A72	D63-V67 PolarHBondContact O-N 3.01Å; D63-V67 VanDerWaalsContact O-N 3.12Å; V67-P69 WeakPolarHBondContact O-CD 3.44Å; V67-P69 VanDerWaalsContact O-N 3.11Å; V67-A72 HydrophobicContact CG1-CB 4.03Å
68	C	48.5	Very low	50.7	Low	26 Å²	26	101.2 Å²	101.2	18%	0.176	57%	0.569	C	S	.	*			trans	-53.5	113.2	160.1	-83.3	0	0	0	0	107.9	W70 E71 A72	C68-W70 HydrophobicContact CB-CD2 4.46Å; C68-W70 HydrophobicContact CB-CG 4.49Å; C68-W70 HydrophobicContact CB-CZ2 4.34Å; C68-W70 PolarHBondContact O-N 3.37Å; C68-W70 VanDerWaalsContact O-N 3.17Å; C68-E71 HydrophobicContact CB-CB 3.25Å; C68-E71 HydrophobicContact CB-CG 4.22Å; C68-E71 VanDerWaalsContact CB-OE2 3.29Å; C68-E71 WeakPolarHBondContact CB-OE2 3.42Å; C68-E71 WeakPolarHBondContact O-CA 2.99Å; C68-E71 WeakPolarHBondContact O-CB 2.87Å; C68-E71 PolarHBondContact O-N 2.8Å; C68-E71 PolarHBondContact SG-OE2 3.48Å; C68-A72 PolarHBondContact O-N 3.17Å
69	P	46.8	Very low	51	Low	76 Å²	76	99.4 Å²	99.4	49%	0.494	57%	0.569	S	S	.	*	T	Hydrogen-bonded Turn	trans	-64.6	-24.7	-175.4	-21.7	33.9	0	0	0	112.5	V67	V67-P69 WeakPolarHBondContact O-CD 3.44Å; V67-P69 VanDerWaalsContact O-N 3.11Å
70	W	47.6	Very low	51.6	Low	187 Å²	187	100.2 Å²	100.2	71%	0.708	57%	0.565	S	S	*	*	T	Hydrogen-bonded Turn	trans	-81.7	-10.7	170.1	54.7	72.8	0	0	0	113.9	C68 G74	C68-W70 HydrophobicContact CB-CD2 4.46Å; C68-W70 HydrophobicContact CB-CG 4.49Å; C68-W70 HydrophobicContact CB-CZ2 4.34Å; C68-W70 PolarHBondContact O-N 3.37Å; C68-W70 VanDerWaalsContact O-N 3.17Å; W70-G74 WeakPolarHBondContact O-CA 3.4Å; W70-G74 PolarHBondContact O-N 3.27Å
71	E	50.2	Low	52.2	Low	136 Å²	136	99.5 Å²	99.5	64%	0.636	56%	0.561	S	S	*	*	T	Hydrogen-bonded Turn	trans	-97.2	-30.6	179.4	-157.3	170.9	133.9	0	0	110.2	C68 Y73 G74	C68-E71 HydrophobicContact CB-CB 3.25Å; C68-E71 HydrophobicContact CB-CG 4.22Å; C68-E71 VanDerWaalsContact CB-OE2 3.29Å; C68-E71 WeakPolarHBondContact CB-OE2 3.42Å; C68-E71 WeakPolarHBondContact O-CA 2.99Å; C68-E71 WeakPolarHBondContact O-CB 2.87Å; C68-E71 PolarHBondContact O-N 2.8Å; C68-E71 PolarHBondContact SG-OE2 3.48Å; E71-Y73 PolarHBondContact O-N 3.12Å; E71-G74 PolarHBondContact O-N 3.01Å
72	A	49.6	Very low	52.8	Low	65 Å²	65	100.4 Å²	100.4	54%	0.537	56%	0.564	S	S	.	*	T	Hydrogen-bonded Turn	trans	-71.8	-12.9	168.4	0	0	0	0	0	114	V67 C68	V67-A72 HydrophobicContact CG1-CB 4.03Å; C68-A72 PolarHBondContact O-N 3.17Å
73	Y	48.2	Very low	53.2	Low	186 Å²	186	101.9 Å²	101.9	73%	0.729	56%	0.56	S	S	*	*	T	Hydrogen-bonded Turn	trans	-127.8	8.2	170.4	-70.9	-82.1	0	0	0	113.2	E71	E71-Y73 PolarHBondContact O-N 3.12Å
74	G	49.8	Very low	53.9	Low	55 Å²	55	105 Å²	105	57%	0.567	57%	0.565	S	S	*	*	T	Hydrogen-bonded Turn	trans	-84.2	-14.5	-178.1	0	0	0	0	0	114	W70 E71 M76	W70-G74 WeakPolarHBondContact O-CA 3.4Å; W70-G74 PolarHBondContact O-N 3.27Å; E71-G74 PolarHBondContact O-N 3.01Å; G74-M76 VanDerWaalsContact C-N 3.35Å
75	D	54	Low	54.3	Low	158 Å²	158	103.7 Å²	103.7	85%	0.845	57%	0.573	S	S	*	*	T	Hydrogen-bonded Turn	trans	-94.4	7.6	173.1	-160	61.9	0	0	0	112.5
76	M	51.6	Low	55.1	Low	91 Å²	91	105.4 Å²	105.4	45%	0.448	57%	0.568	S	S	.	*	S	Bend	trans	-95.4	98.1	162.9	-154.8	171.1	158	0	0	106.3	G74 L78 D80 L81	G74-M76 VanDerWaalsContact C-N 3.35Å; M76-L78 PolarHBondContact O-N 3.02Å; M76-D80 HydrophobicContact CE-CB 4.28Å; M76-L81 HydrophobicContact CB-CD1 4.49Å; M76-L81 HydrophobicContact CE-CD1 4.47Å; M76-L81 HydrophobicContact CG-CD1 4.31Å
77	E	55.8	Low	55.2	Low	145 Å²	145	107.3 Å²	107.3	68%	0.678	57%	0.573	S	S	*	*			trans	-43.3	130.1	-176.8	-67.9	-169.8	106.7	0	0	110.3	S79 D80	E77-S79 PolarHBondContact O-N 2.94Å; E77-D80 PolarHBondContact O-N 3.09Å
78	L	57.3	Low	55.2	Low	135 Å²	135	108.6 Å²	108.6	71%	0.707	58%	0.577	S	S	*	*	H	α-helix	trans	-47.3	-26.9	175.9	-143.3	71.5	0	0	0	112.5	M76 D80 L81 A82 I87	M76-L78 PolarHBondContact O-N 3.02Å; L78-D80 VanDerWaalsContact C-N 3.32Å; L78-D80 PolarHBondContact O-N 2.93Å; L78-L81 PolarHBondContact O-N 2.91Å; L78-A82 PolarHBondContact O-N 2.7Å; L78-I87 HydrophobicContact CD1-CD1 4.48Å; L78-I87 HydrophobicContact CG-CD1 4.09Å
79	S	60.2	Low	55.5	Low	81 Å²	81	112.9 Å²	112.9	57%	0.566	60%	0.598	S	S	*	*	H	α-helix	trans	-53.6	-37.3	171.1	-53.2	0	0	0	0	114.7	E77 K83	E77-S79 PolarHBondContact O-N 2.94Å; S79-K83 PolarHBondContact O-N 2.84Å
80	D	64.5	Low	56	Low	54 Å²	54	114.9 Å²	114.9	29%	0.289	60%	0.604	S	S	.	*	H	α-helix	trans	-84	-31.9	-176	-135.9	33.8	0	0	0	111.5	M76 E77 L78 K83 Y84	M76-D80 HydrophobicContact CE-CB 4.28Å; E77-D80 PolarHBondContact O-N 3.09Å; L78-D80 VanDerWaalsContact C-N 3.32Å; L78-D80 PolarHBondContact O-N 2.93Å; D80-K83 WeakPolarHBondContact O-CB 3.29Å; D80-K83 PolarHBondContact O-N 3.34Å; D80-K83 WeakPolarHBondContact OD1-CD 3.06Å; D80-K83 IonicContact OD1-NZ 3.62Å; D80-Y84 WeakPolarHBondContact O-CD2 2.97Å
81	L	61.8	Low	56.5	Low	51 Å²	51	110.7 Å²	110.7	27%	0.267	60%	0.598	S	S	.	*	H	α-helix	trans	-67.9	-35.7	172.3	-82.3	76.4	0	0	0	112.3	M76 L78 K83 Y84 G85 I86 I87	M76-L81 HydrophobicContact CB-CD1 4.49Å; M76-L81 HydrophobicContact CE-CD1 4.47Å; M76-L81 HydrophobicContact CG-CD1 4.31Å; L78-L81 PolarHBondContact O-N 2.91Å; L81-K83 PolarHBondContact O-N 3.29Å; L81-Y84 PolarHBondContact O-N 2.79Å; L81-G85 PolarHBondContact O-N 3.49Å; L81-I86 PolarHBondContact O-N 3.33Å; L81-I87 HydrophobicContact CB-CD1 3.82Å; L81-I87 HydrophobicContact CB-CG1 3.98Å
82	A	60.1	Low	56.9	Low	62 Å²	62	109.1 Å²	109.1	51%	0.512	60%	0.595	S	S	.	*	H	α-helix	trans	-63.3	-30.6	173.4	0	0	0	0	0	112.2	L78 Y84 G85 I87	L78-A82 PolarHBondContact O-N 2.7Å; A82-Y84 VanDerWaalsContact C-N 3.29Å; A82-Y84 PolarHBondContact O-N 3.12Å; A82-G85 PolarHBondContact O-N 3.3Å; A82-I87 HydrophobicContact CB-CD1 4.46Å
83	K	59.7	Low	57.4	Low	160 Å²	160	112.1 Å²	112.1	70%	0.696	60%	0.599	S	S	*	*	H	α-helix	trans	-65.1	-32.4	177.1	-130.7	171.5	-166.1	158.8	0	112.9	S79 D80 L81	S79-K83 PolarHBondContact O-N 2.84Å; D80-K83 WeakPolarHBondContact O-CB 3.29Å; D80-K83 PolarHBondContact O-N 3.34Å; D80-K83 WeakPolarHBondContact OD1-CD 3.06Å; D80-K83 IonicContact OD1-NZ 3.62Å; L81-K83 PolarHBondContact O-N 3.29Å
84	Y	62.9	Low	58	Low	169 Å²	169	106.8 Å²	106.8	66%	0.663	59%	0.59	S	S	*	*	T	Hydrogen-bonded Turn	trans	-97.7	0.6	178.4	-64.5	-72.1	0	0	0	113.5	D80 L81 A82 I86	D80-Y84 WeakPolarHBondContact O-CD2 2.97Å; L81-Y84 PolarHBondContact O-N 2.79Å; A82-Y84 VanDerWaalsContact C-N 3.29Å; A82-Y84 PolarHBondContact O-N 3.12Å; Y84-I86 PolarHBondContact O-N 3.1Å
85	G	56.6	Low	58.7	Low	59 Å²	59	110.8 Å²	110.8	61%	0.608	59%	0.591	S	S	*	*	T	Hydrogen-bonded Turn	trans	63.1	26.3	176.8	0	0	0	0	0	114.3	L81 A82 I87	L81-G85 PolarHBondContact O-N 3.49Å; A82-G85 PolarHBondContact O-N 3.3Å; G85-I87 VanDerWaalsContact C-N 3.31Å
86	I	64.1	Low	59	Low	127 Å²	127	106.8 Å²	106.8	65%	0.651	57%	0.57	S	S	*	*			trans	-79.3	-22	178.8	-61.1	171.9	0	0	0	110.6	L81 Y84	L81-I86 PolarHBondContact O-N 3.33Å; Y84-I86 PolarHBondContact O-N 3.1Å
87	I	53.9	Low	59.7	Low	148 Å²	148	108.3 Å²	108.3	76%	0.759	58%	0.581	S	S	*	*			trans	-119.1	0	170.5	47.5	174.9	0	0	0	110.6	L78 L81 A82 G85	L78-I87 HydrophobicContact CD1-CD1 4.48Å; L78-I87 HydrophobicContact CG-CD1 4.09Å; L81-I87 HydrophobicContact CB-CD1 3.82Å; L81-I87 HydrophobicContact CB-CG1 3.98Å; A82-I87 HydrophobicContact CB-CD1 4.46Å; G85-I87 VanDerWaalsContact C-N 3.31Å

Retrieved 87 of 87 residues in 120.2 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).