A0A060YIR5_ONCMY Loading...

Nuclear protein 1

AlphaFold DB (A0A673WBK2), UniProt , Accession A0A060YIR5, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene n/a, Length 75 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M37.1Very low53.3Low236 Ų236129.9 Ų129.9100%1.16369%0.693SS**  0113.50-83.767.4145.500108.3
2S44Very low54.7Low119 Ų119123.7 Ų123.783%0.83267%0.665SS**  trans-82.6107.5158.1146.90000104.3F4S2-F4 PolarHBondContact O-N 3.26Å; S2-F4 VanDerWaalsContact O-N 3.14Å
3S46.2Very low56.5Low99 Ų99120.1 Ų120.169%0.69265%0.65SS**  trans-68.6104.6172.546.80000107.1V5S3-V5 PolarHBondContact O-N 2.98Å
4F49.9Very low58.2Low138 Ų138123.5 Ų123.561%0.60565%0.65SS**  trans-67.2111.2167.5-179.3-102.7000106.9S2 D6 E30S2-F4 PolarHBondContact O-N 3.26Å; S2-F4 VanDerWaalsContact O-N 3.14Å; F4-D6 VanDerWaalsContact CE1-OD1 3.32Å; F4-D6 WeakPolarHBondContact CE1-OD1 3.47Å; F4-E30 WeakPolarHBondContact CD2-OE1 3.46Å; F4-E30 WeakPolarHBondContact CE2-OE1 3.37Å
5V55.9Low59.8Low76 Ų76122.9 Ų122.946%0.46164%0.641SS.*  trans-107.1106.1178.3-177.70000106S3 V7 V10S3-V5 PolarHBondContact O-N 2.98Å; V5-V7 WeakPolarHBondContact O-CG2 3.44Å; V5-V7 PolarHBondContact O-N 2.62Å; V5-V10 HydrophobicContact CG1-CG2 3.58Å
6D52.4Low61.1Low104 Ų104117.4 Ų117.456%0.55661%0.611SS**  trans-59.3103174.9-93.9-48.5000109.3F4 K8F4-D6 VanDerWaalsContact CE1-OD1 3.32Å; F4-D6 WeakPolarHBondContact CE1-OD1 3.47Å; D6-K8 PolarHBondContact O-N 2.96Å
7V55.9Low62.3Low62 Ų62117.9 Ų117.938%0.37661%0.609SS.*G310 helixtrans-62.7-6.6-173.4172.70000114V5 N9 E30V5-V7 WeakPolarHBondContact O-CG2 3.44Å; V5-V7 PolarHBondContact O-N 2.62Å; V7-N9 PolarHBondContact O-N 3.13Å; V7-E30 HydrophobicContact CB-CB 4.44Å; V7-E30 HydrophobicContact CG2-CB 3.58Å; V7-E30 HydrophobicContact CG2-CG 3.94Å
8K56.9Low63.7Low192 Ų192117.7 Ų117.784%0.83561%0.605SS**G310 helixtrans-66.8-19.1-179.3-66.2-174.6-179177.60114D6D6-K8 PolarHBondContact O-N 2.96Å
9N55.1Low64.8Low149 Ų149117.3 Ų117.380%0.79760%0.6SS**G310 helixtrans-13121.7-174.5-71.312.7000113.9V7 E11V7-N9 PolarHBondContact O-N 3.13Å; N9-E11 PolarHBondContact O-N 3.26Å
10V64.4Low65.8Low83 Ų83115.4 Ų115.450%0.50359%0.586SS.*  trans-88.7102.6176.9-1750000108.3V5V5-V10 HydrophobicContact CG1-CG2 3.58Å
11E68.3Low66.6Low171 Ų171113.8 Ų113.880%0.79958%0.579SS**PPolyproline II helixtrans-69.9133.1167.9-65.7-166.916900109N9 T13N9-E11 PolarHBondContact O-N 3.26Å; E11-T13 PolarHBondContact O-N 3.44Å
12P70.5Confident68.5Low55 Ų55111 Ų11136%0.35756%0.563SS.*PPolyproline II helixtrans-52.7136.2173.8-2735.8000111.1E16 E17 Y25P12-E16 HydrophobicContact CB-CB 4.4Å; P12-E17 HydrophobicContact CB-CG 3.86Å; P12-Y25 HydrophobicContact CB-CE1 3.86Å; P12-Y25 HydrophobicContact CG-CE1 3.75Å
13T78.3Confident70Confident77 Ų77114.2 Ų114.247%0.47256%0.558SS.*PPolyproline II helixtrans-70.5155.3171.360.90000110.1E11 F15 E16 E17E11-T13 PolarHBondContact O-N 3.44Å; T13-F15 PolarHBondContact O-N 3.24Å; T13-E16 PolarHBondContact N-OE2 3.49Å; T13-E16 PolarHBondContact O-N 3.01Å; T13-E16 VanDerWaalsContact OG1-CD 3.26Å; T13-E16 WeakPolarHBondContact OG1-CG 3.5Å; T13-E16 PolarHBondContact OG1-OE2 2.98Å; T13-E17 PolarHBondContact O-N 3.11Å
14Y80.1Confident71.6Confident168 Ų168113.2 Ų113.266%0.65954%0.542SS*.Hα-helixtrans-51.5-29.1176.1176.4-95.5000113.7Q18Y14-Q18 WeakPolarHBondContact O-CG 3.42Å; Y14-Q18 PolarHBondContact O-N 2.97Å; Y14-Q18 PolarHBondContact OH-NE2 3.18Å
15F82.3Confident72.8Confident115 Ų115110.1 Ų110.150%0.50453%0.527SS..Hα-helixtrans-68.2-49.3175179-96.5000111.8T13 E17 Q18 H19 Y20T13-F15 PolarHBondContact O-N 3.24Å; F15-E17 VanDerWaalsContact C-N 3.34Å; F15-E17 PolarHBondContact O-N 3.32Å; F15-Q18 PolarHBondContact O-N 3.27Å; F15-H19 AromaticContact CD2-CE1 3.97Å; F15-H19 AromaticContact CD2-ND1 3.87Å; F15-H19 AromaticContact CE2-CD2 3.97Å; F15-H19 AromaticContact CE2-CG 3.98Å; F15-H19 AromaticContact CE2-ND1 3.97Å; F15-H19 AromaticContact CE2-NE2 3.99Å; F15-H19 HydrophobicContact CZ-CB 4.41Å; F15-H19 WeakPolarHBondContact O-CB 3.46Å; F15-H19 PolarHBondContact O-N 2.85Å; F15-H19 VanDerWaalsContact O-N 3.1Å; F15-H19 PolarHBondContact O-ND1 2.73Å; F15-Y20 HydrophobicContact CE1-CE1 4.32Å
16E80.6Confident73.3Confident35 Ų35112.9 Ų112.916%0.16453%0.53CS..Hα-helixtrans-64.1-40-179.7-64.3163.1145.200110.5P12 T13 Q18 H19 Y20 Y25P12-E16 HydrophobicContact CB-CB 4.4Å; T13-E16 PolarHBondContact N-OE2 3.49Å; T13-E16 PolarHBondContact O-N 3.01Å; T13-E16 VanDerWaalsContact OG1-CD 3.26Å; T13-E16 WeakPolarHBondContact OG1-CG 3.5Å; T13-E16 PolarHBondContact OG1-OE2 2.98Å; E16-Q18 PolarHBondContact O-N 2.78Å; E16-H19 PolarHBondContact O-N 3.2Å; E16-Y20 HydrophobicContact CB-CD2 3.91Å; E16-Y20 HydrophobicContact CB-CE2 4.23Å; E16-Y20 HydrophobicContact CB-CG 4.42Å; E16-Y20 HydrophobicContact CG-CD2 3.92Å; E16-Y20 HydrophobicContact CG-CE2 3.71Å; E16-Y20 VanDerWaalsContact O-CB 3.28Å; E16-Y20 WeakPolarHBondContact O-CB 3.29Å; E16-Y20 PolarHBondContact O-N 3.31Å; E16-Y25 HydrophobicContact CB-CE1 4.41Å; E16-Y25 PolarHBondContact O-OH 3.12Å
17E81.2Confident74.1Confident125 Ų125112.8 Ų112.858%0.58453%0.53SS*.Hα-helixtrans-58.7-33.6176.1-70.7-169.3156.700113.9P12 T13 F15 Y25P12-E17 HydrophobicContact CB-CG 3.86Å; T13-E17 PolarHBondContact O-N 3.11Å; F15-E17 VanDerWaalsContact C-N 3.34Å; F15-E17 PolarHBondContact O-N 3.32Å; E17-Y25 VanDerWaalsContact CA-OH 3.22Å; E17-Y25 WeakPolarHBondContact CA-OH 3.31Å; E17-Y25 PolarHBondContact N-OH 3.02Å
18Q87.3Confident74.8Confident114 Ų114113.1 Ų113.153%0.53353%0.529SS..Hα-helixtrans-91.6-26.3-176.4-71.9-164.60.200114.4Y14 F15 E16Y14-Q18 WeakPolarHBondContact O-CG 3.42Å; Y14-Q18 PolarHBondContact O-N 2.97Å; Y14-Q18 PolarHBondContact OH-NE2 3.18Å; F15-Q18 PolarHBondContact O-N 3.27Å; E16-Q18 PolarHBondContact O-N 2.78Å
19H84.6Confident75.1Confident110 Ų110105.5 Ų105.551%0.50950%0.5SS..Hα-helixtrans-113.4-19.1-167.9-61.368000112.6F15 E16F15-H19 AromaticContact CD2-CE1 3.97Å; F15-H19 AromaticContact CD2-ND1 3.87Å; F15-H19 AromaticContact CE2-CD2 3.97Å; F15-H19 AromaticContact CE2-CG 3.98Å; F15-H19 AromaticContact CE2-ND1 3.97Å; F15-H19 AromaticContact CE2-NE2 3.99Å; F15-H19 HydrophobicContact CZ-CB 4.41Å; F15-H19 WeakPolarHBondContact O-CB 3.46Å; F15-H19 PolarHBondContact O-N 2.85Å; F15-H19 VanDerWaalsContact O-N 3.1Å; F15-H19 PolarHBondContact O-ND1 2.73Å; E16-H19 PolarHBondContact O-N 3.2Å
20Y84.6Confident75.2Confident80 Ų80100.5 Ų100.531%0.31447%0.472SS..  trans-100.4135.9-176.2-67.9-1.2000113F15 E16 E24 L28F15-Y20 HydrophobicContact CE1-CE1 4.32Å; E16-Y20 HydrophobicContact CB-CD2 3.91Å; E16-Y20 HydrophobicContact CB-CE2 4.23Å; E16-Y20 HydrophobicContact CB-CG 4.42Å; E16-Y20 HydrophobicContact CG-CD2 3.92Å; E16-Y20 HydrophobicContact CG-CE2 3.71Å; E16-Y20 VanDerWaalsContact O-CB 3.28Å; E16-Y20 WeakPolarHBondContact O-CB 3.29Å; E16-Y20 PolarHBondContact O-N 3.31Å; Y20-E24 WeakPolarHBondContact CA-OE2 3.34Å; Y20-E24 HydrophobicContact CD1-CB 4.31Å; Y20-E24 HydrophobicContact CD2-CB 4.17Å; Y20-E24 HydrophobicContact CG-CB 3.85Å; Y20-L28 HydrophobicContact CD2-CD1 3.95Å; Y20-L28 HydrophobicContact CE2-CD1 3.93Å; Y20-L28 HydrophobicContact CE2-CD2 4.21Å; Y20-L28 HydrophobicContact CE2-CG 4.37Å
21D83.5Confident74.9Confident82 Ų82105.4 Ų105.444%0.43949%0.486SS..  trans-84170.716874.515000112.1Y23 E24 Y25D21-Y23 PolarHBondContact O-N 3.06Å; D21-Y23 VanDerWaalsContact O-N 3.08Å; D21-Y23 WeakPolarHBondContact OD1-CA 3.36Å; D21-Y23 WeakPolarHBondContact OD1-CB 3.44Å; D21-Y23 PolarHBondContact OD1-N 3.5Å; D21-E24 PolarHBondContact N-OE2 3.35Å; D21-E24 PolarHBondContact O-N 2.94Å; D21-E24 VanDerWaalsContact O-N 3.12Å; D21-E24 WeakPolarHBondContact OD1-CG 3.24Å; D21-E24 PolarHBondContact OD1-N 2.78Å; D21-Y25 WeakPolarHBondContact O-CD2 3.38Å; D21-Y25 PolarHBondContact O-N 3.13Å
22E76.8Confident74.1Confident178 Ų178103.8 Ų103.883%0.83247%0.474SS*.Hα-helixtrans-55-27.5179-79.3-175.9174.500113.6
23Y75.7Confident73.4Confident185 Ų185105.4 Ų105.473%0.72548%0.483SS*.Hα-helixtrans-80-37.2179.5-76.1-82.8000112D21 Y25 Y26D21-Y23 PolarHBondContact O-N 3.06Å; D21-Y23 VanDerWaalsContact O-N 3.08Å; D21-Y23 WeakPolarHBondContact OD1-CA 3.36Å; D21-Y23 WeakPolarHBondContact OD1-CB 3.44Å; D21-Y23 PolarHBondContact OD1-N 3.5Å; Y23-Y25 VanDerWaalsContact C-N 3.27Å; Y23-Y25 PolarHBondContact O-N 3Å; Y23-Y26 VanDerWaalsContact O-CB 3.26Å; Y23-Y26 WeakPolarHBondContact O-CB 3.36Å; Y23-Y26 PolarHBondContact O-N 3.31Å; Y23-Y26 VanDerWaalsContact O-N 3.09Å
24E78.9Confident72.1Confident78 Ų78105 Ų10536%0.36448%0.482SS..Hα-helixtrans-63.9-34.2177.5-74.6163.7147.600111.4Y20 D21 Y26 N27Y20-E24 WeakPolarHBondContact CA-OE2 3.34Å; Y20-E24 HydrophobicContact CD1-CB 4.31Å; Y20-E24 HydrophobicContact CD2-CB 4.17Å; Y20-E24 HydrophobicContact CG-CB 3.85Å; D21-E24 PolarHBondContact N-OE2 3.35Å; D21-E24 PolarHBondContact O-N 2.94Å; D21-E24 VanDerWaalsContact O-N 3.12Å; D21-E24 WeakPolarHBondContact OD1-CG 3.24Å; D21-E24 PolarHBondContact OD1-N 2.78Å; E24-Y26 VanDerWaalsContact C-N 3.27Å; E24-Y26 PolarHBondContact O-N 2.93Å; E24-N27 WeakPolarHBondContact O-CB 3.35Å; E24-N27 PolarHBondContact O-N 3.08Å
25Y75Confident70.7Confident73 Ų7399.8 Ų99.829%0.28648%0.48SS..Hα-helixtrans-60.8-31.7171.5-79-72.1000114.1P12 E16 E17 D21 Y23 N27 L28P12-Y25 HydrophobicContact CB-CE1 3.86Å; P12-Y25 HydrophobicContact CG-CE1 3.75Å; E16-Y25 HydrophobicContact CB-CE1 4.41Å; E16-Y25 PolarHBondContact O-OH 3.12Å; E17-Y25 VanDerWaalsContact CA-OH 3.22Å; E17-Y25 WeakPolarHBondContact CA-OH 3.31Å; E17-Y25 PolarHBondContact N-OH 3.02Å; D21-Y25 WeakPolarHBondContact O-CD2 3.38Å; D21-Y25 PolarHBondContact O-N 3.13Å; Y23-Y25 VanDerWaalsContact C-N 3.27Å; Y23-Y25 PolarHBondContact O-N 3Å; Y25-N27 PolarHBondContact O-N 3.48Å; Y25-L28 HydrophobicContact CD1-CD1 4.04Å; Y25-L28 HydrophobicContact CE1-CD1 4.43Å; Y25-L28 PolarHBondContact O-N 2.59Å
26Y68.1Low69.4Low135 Ų13598.1 Ų98.153%0.52949%0.487SS..Hα-helixtrans-64.2-33.8179.6-163.6-102.5000112Y23 E24 L28 S29 Y32Y23-Y26 VanDerWaalsContact O-CB 3.26Å; Y23-Y26 WeakPolarHBondContact O-CB 3.36Å; Y23-Y26 PolarHBondContact O-N 3.31Å; Y23-Y26 VanDerWaalsContact O-N 3.09Å; E24-Y26 VanDerWaalsContact C-N 3.27Å; E24-Y26 PolarHBondContact O-N 2.93Å; Y26-L28 VanDerWaalsContact C-N 3.29Å; Y26-L28 PolarHBondContact O-N 3.47Å; Y26-S29 PolarHBondContact O-N 2.95Å; Y26-S29 PolarHBondContact O-OG 3.41Å; Y26-Y32 HydrophobicContact CD1-CD2 4.14Å; Y26-Y32 AromaticContact CD1-CE2 3.96Å; Y26-Y32 HydrophobicContact CD1-CE2 3.96Å; Y26-Y32 AromaticContact CE1-CD2 3.83Å; Y26-Y32 HydrophobicContact CE1-CD2 3.83Å; Y26-Y32 HydrophobicContact CE1-CE1 4.17Å; Y26-Y32 AromaticContact CE1-CE2 3.24Å; Y26-Y32 HydrophobicContact CE1-CE2 3.24Å; Y26-Y32 AromaticContact CE1-CZ 3.45Å; Y26-Y32 VanDerWaalsContact CE1-CZ 3.45Å; Y26-Y32 HydrophobicContact CE2-CE2 4.3Å; Y26-Y32 AromaticContact CZ-CE2 3.46Å; Y26-Y32 VanDerWaalsContact CZ-CE2 3.46Å; Y26-Y32 AromaticContact CZ-CZ 3.67Å; Y26-Y32 PolarHBondContact OH-OH 2.98Å
27N69.3Low68.2Low101 Ų10199.5 Ų99.554%0.5450%0.501SS..Hα-helixtrans-73.9-19.3-179.8-60.8-40.6000113.1E24 Y25 S29 T33E24-N27 WeakPolarHBondContact O-CB 3.35Å; E24-N27 PolarHBondContact O-N 3.08Å; Y25-N27 PolarHBondContact O-N 3.48Å; N27-S29 VanDerWaalsContact C-N 3.29Å; N27-T33 WeakPolarHBondContact O-CG2 3.26Å
28L68.9Low67.1Low70 Ų70105.3 Ų105.337%0.36652%0.517SS..THydrogen-bonded Turntrans-78.1-15.4175.8-62.8177.6000112.7Y20 Y25 Y26Y20-L28 HydrophobicContact CD2-CD1 3.95Å; Y20-L28 HydrophobicContact CE2-CD1 3.93Å; Y20-L28 HydrophobicContact CE2-CD2 4.21Å; Y20-L28 HydrophobicContact CE2-CG 4.37Å; Y25-L28 HydrophobicContact CD1-CD1 4.04Å; Y25-L28 HydrophobicContact CE1-CD1 4.43Å; Y25-L28 PolarHBondContact O-N 2.59Å; Y26-L28 VanDerWaalsContact C-N 3.29Å; Y26-L28 PolarHBondContact O-N 3.47Å
29S64.3Low65.9Low31 Ų31107.9 Ų107.922%0.21753%0.527CS..SBendtrans-73.1133.3-179.573.10000112.2Y26 N27 K31 Y32Y26-S29 PolarHBondContact O-N 2.95Å; Y26-S29 PolarHBondContact O-OG 3.41Å; N27-S29 VanDerWaalsContact C-N 3.29Å; S29-K31 PolarHBondContact O-N 3.07Å; S29-Y32 PolarHBondContact O-N 3Å; S29-Y32 WeakPolarHBondContact OG-CD2 3.46Å
30E57.8Low64.8Low44 Ų44105.9 Ų105.921%0.20654%0.536CS..Hα-helixtrans-53.9-27.7-173.9-130.4-175.6156.300113.8F4 V7 Y32 T33 C34F4-E30 WeakPolarHBondContact CD2-OE1 3.46Å; F4-E30 WeakPolarHBondContact CE2-OE1 3.37Å; V7-E30 HydrophobicContact CB-CB 4.44Å; V7-E30 HydrophobicContact CG2-CB 3.58Å; V7-E30 HydrophobicContact CG2-CG 3.94Å; E30-Y32 PolarHBondContact O-N 2.96Å; E30-Y32 VanDerWaalsContact O-N 3.16Å; E30-T33 WeakPolarHBondContact CA-OG1 3.28Å; E30-T33 PolarHBondContact O-N 3.49Å; E30-C34 HydrophobicContact CG-CB 4.35Å; E30-C34 WeakPolarHBondContact O-CB 3.43Å; E30-C34 PolarHBondContact O-N 3.09Å
31K56.2Low64.1Low186 Ų186108.1 Ų108.181%0.80954%0.544SS*.Hα-helixtrans-58.5-27.1179.7-79.3-175.4178.11780113.1S29S29-K31 PolarHBondContact O-N 3.07Å
32Y53.4Low63.8Low137 Ų137106.9 Ų106.954%0.53754%0.542SS..Hα-helixtrans-108.1-18.4-178.7-60.4-76.5000113.3Y26 S29 E30Y26-Y32 HydrophobicContact CD1-CD2 4.14Å; Y26-Y32 AromaticContact CD1-CE2 3.96Å; Y26-Y32 HydrophobicContact CD1-CE2 3.96Å; Y26-Y32 AromaticContact CE1-CD2 3.83Å; Y26-Y32 HydrophobicContact CE1-CD2 3.83Å; Y26-Y32 HydrophobicContact CE1-CE1 4.17Å; Y26-Y32 AromaticContact CE1-CE2 3.24Å; Y26-Y32 HydrophobicContact CE1-CE2 3.24Å; Y26-Y32 AromaticContact CE1-CZ 3.45Å; Y26-Y32 VanDerWaalsContact CE1-CZ 3.45Å; Y26-Y32 HydrophobicContact CE2-CE2 4.3Å; Y26-Y32 AromaticContact CZ-CE2 3.46Å; Y26-Y32 VanDerWaalsContact CZ-CE2 3.46Å; Y26-Y32 AromaticContact CZ-CZ 3.67Å; Y26-Y32 PolarHBondContact OH-OH 2.98Å; S29-Y32 PolarHBondContact O-N 3Å; S29-Y32 WeakPolarHBondContact OG-CD2 3.46Å; E30-Y32 PolarHBondContact O-N 2.96Å; E30-Y32 VanDerWaalsContact O-N 3.16Å
33T53.9Low63.6Low90 Ų90107.2 Ų107.255%0.55254%0.541SS*.Hα-helixtrans-92-24.2178.465.80000112.8N27 E30 G35N27-T33 WeakPolarHBondContact O-CG2 3.26Å; E30-T33 WeakPolarHBondContact CA-OG1 3.28Å; E30-T33 PolarHBondContact O-N 3.49Å; T33-G35 PolarHBondContact O-N 3.39Å
34C52.2Low63.6Low67 Ų67105.5 Ų105.545%0.45354%0.537SS..  trans-94.471.2-175.6-166.40000112.5E30 A36E30-C34 HydrophobicContact CG-CB 4.35Å; E30-C34 WeakPolarHBondContact O-CB 3.43Å; E30-C34 PolarHBondContact O-N 3.09Å; C34-A36 PolarHBondContact O-N 3.2Å
35G51.1Low63Low59 Ų59106.3 Ų106.361%0.60854%0.541SS*.  trans-71.358.4160.500000111.9T33 S37T33-G35 PolarHBondContact O-N 3.39Å; G35-S37 PolarHBondContact O-N 3.49Å
36A54.8Low62.8Low80 Ų80104.6 Ų104.666%0.66154%0.542SS*.THydrogen-bonded Turntrans-67.53.6-176.900000115.1C34 R38C34-A36 PolarHBondContact O-N 3.2Å; A36-R38 PolarHBondContact O-N 3.35Å
37S55.4Low63Low65 Ų65101.5 Ų101.546%0.45554%0.54SS..THydrogen-bonded Turntrans-86.295.4162.9-87.30000108.6G35 K39 G40G35-S37 PolarHBondContact O-N 3.49Å; S37-K39 CarbonylContact O-C 3.6Å; S37-K39 PolarHBondContact O-N 3.06Å; S37-G40 PolarHBondContact O-N 3.07Å
38R57.9Low63.2Low246 Ų246100.8 Ų100.893%0.92854%0.536SS*.THydrogen-bonded Turntrans-31.9109.2173.1-65.6-180-123.6-166.9-1.3109.9A36A36-R38 PolarHBondContact O-N 3.35Å
39K62.1Low63.4Low168 Ų168101.2 Ų101.273%0.7354%0.539SS*.THydrogen-bonded Turntrans98.722.4-176.6-148144.4-172.1168.50117.4S37 R41S37-K39 CarbonylContact O-C 3.6Å; S37-K39 PolarHBondContact O-N 3.06Å; K39-R41 WeakPolarHBondContact O-CG 3.19Å; K39-R41 PolarHBondContact O-N 2.96Å
40G60.9Low63.6Low69 Ų69103 Ų10371%0.71155%0.548SS*.THydrogen-bonded Turntrans6023.3160.900000115.2S37S37-G40 PolarHBondContact O-N 3.07Å
41R71.1Confident64.1Low126 Ų126106.8 Ų106.848%0.47557%0.57SS.*  trans-103.8139.4176.2-65.3176.3-147.7160.9-0.1109.2K39 E45K39-R41 WeakPolarHBondContact O-CG 3.19Å; K39-R41 PolarHBondContact O-N 2.96Å; R41-E45 WeakPolarHBondContact CA-OE2 3.21Å; R41-E45 HydrophobicContact CB-CB 4.23Å
42S75.3Confident64.8Low56 Ų56104.8 Ų104.839%0.39256%0.557SS.*  trans-63.4157.316666.50000110.9K44 E45 A46S42-K44 PolarHBondContact O-N 3.05Å; S42-E45 WeakPolarHBondContact CB-OE2 3.49Å; S42-E45 PolarHBondContact N-OE2 2.9Å; S42-E45 PolarHBondContact O-N 3.22Å; S42-E45 WeakPolarHBondContact OG-CB 3.49Å; S42-E45 WeakPolarHBondContact OG-CG 3.16Å; S42-E45 PolarHBondContact OG-N 2.86Å; S42-E45 VanDerWaalsContact OG-N 3.1Å; S42-E45 PolarHBondContact OG-OE2 2.8Å; S42-A46 PolarHBondContact O-N 3.1Å
43K73.3Confident65.5Low185 Ų185104.8 Ų104.880%0.80457%0.574SS**Hα-helixtrans-56-35174.8-69.7-178.5180175.20112A46 S47K43-A46 PolarHBondContact O-N 2.75Å; K43-S47 PolarHBondContact O-N 2.97Å; K43-S47 VanDerWaalsContact O-N 3.08Å
44K76.6Confident66Low150 Ų150104.7 Ų104.765%0.65257%0.57SS**Hα-helixtrans-67.9-48.6176.8-176177.9179.3-177.20111.9S42 A46 S47 D48S42-K44 PolarHBondContact O-N 3.05Å; K44-A46 PolarHBondContact O-N 3.29Å; K44-S47 PolarHBondContact O-N 3.14Å; K44-S47 VanDerWaalsContact O-N 3.14Å; K44-S47 PolarHBondContact O-OG 2.78Å; K44-D48 WeakPolarHBondContact O-CB 3.16Å; K44-D48 PolarHBondContact O-N 2.98Å
45E64.8Low67Low94 Ų94107.4 Ų107.444%0.43959%0.587SS.*Hα-helixtrans-61.4-36.4175.4-72.2165.6140.400111.8R41 S42 N49R41-E45 WeakPolarHBondContact CA-OE2 3.21Å; R41-E45 HydrophobicContact CB-CB 4.23Å; S42-E45 WeakPolarHBondContact CB-OE2 3.49Å; S42-E45 PolarHBondContact N-OE2 2.9Å; S42-E45 PolarHBondContact O-N 3.22Å; S42-E45 WeakPolarHBondContact OG-CB 3.49Å; S42-E45 WeakPolarHBondContact OG-CG 3.16Å; S42-E45 PolarHBondContact OG-N 2.86Å; S42-E45 VanDerWaalsContact OG-N 3.1Å; S42-E45 PolarHBondContact OG-OE2 2.8Å; E45-N49 VanDerWaalsContact O-CB 3.28Å; E45-N49 WeakPolarHBondContact O-CB 3.49Å; E45-N49 PolarHBondContact O-N 2.95Å; E45-N49 PolarHBondContact O-ND2 2.9Å
46A71.9Confident68Low37 Ų37106.5 Ų106.531%0.30658%0.578SS.*Hα-helixtrans-63.3-43.4174.700000112S42 K43 K44 T50S42-A46 PolarHBondContact O-N 3.1Å; K43-A46 PolarHBondContact O-N 2.75Å; K44-A46 PolarHBondContact O-N 3.29Å; A46-T50 VanDerWaalsContact O-CB 3.24Å; A46-T50 WeakPolarHBondContact O-CB 3.32Å; A46-T50 PolarHBondContact O-N 2.99Å; A46-T50 VanDerWaalsContact O-N 3.12Å; A46-T50 PolarHBondContact O-OG1 3.22Å
47S72.9Confident69.1Low71 Ų71103.2 Ų103.250%0.49755%0.552SS.*Hα-helixtrans-64.4-45.5176.457.70000111.9K43 K44 N49 T50K43-S47 PolarHBondContact O-N 2.97Å; K43-S47 VanDerWaalsContact O-N 3.08Å; K44-S47 PolarHBondContact O-N 3.14Å; K44-S47 VanDerWaalsContact O-N 3.14Å; K44-S47 PolarHBondContact O-OG 2.78Å; S47-N49 VanDerWaalsContact C-N 3.28Å; S47-N49 PolarHBondContact O-N 3.21Å; S47-T50 PolarHBondContact O-N 3.3Å; S47-T50 VanDerWaalsContact O-N 3.13Å
48D73.7Confident70.2Confident85 Ų85106.7 Ų106.746%0.45556%0.561SS.*Hα-helixtrans-72.7-24.8-172.1-61.8-6.9000112.4K44 R52K44-D48 WeakPolarHBondContact O-CB 3.16Å; K44-D48 PolarHBondContact O-N 2.98Å; D48-R52 PolarHBondContact O-NE 2.97Å; D48-R52 PolarHBondContact O-NH2 3.16Å
49N71.2Confident71.4Confident80 Ų80101.6 Ų101.643%0.42855%0.547SS..Hα-helixtrans-95.8-5.3175.1-68.9-83.4000113E45 S47 R52E45-N49 VanDerWaalsContact O-CB 3.28Å; E45-N49 WeakPolarHBondContact O-CB 3.49Å; E45-N49 PolarHBondContact O-N 2.95Å; E45-N49 PolarHBondContact O-ND2 2.9Å; S47-N49 VanDerWaalsContact C-N 3.28Å; S47-N49 PolarHBondContact O-N 3.21Å; N49-R52 PolarHBondContact OD1-NH1 3.02Å; N49-R52 PolarHBondContact OD1-NH2 2.83Å
50T69.9Low72.4Confident68 Ų68100.8 Ų100.842%0.41754%0.54SS..SBendtrans-87.9141.1175.3-65.50000110A46 S47 R52A46-T50 VanDerWaalsContact O-CB 3.24Å; A46-T50 WeakPolarHBondContact O-CB 3.32Å; A46-T50 PolarHBondContact O-N 2.99Å; A46-T50 VanDerWaalsContact O-N 3.12Å; A46-T50 PolarHBondContact O-OG1 3.22Å; S47-T50 PolarHBondContact O-N 3.3Å; S47-T50 VanDerWaalsContact O-N 3.13Å; T50-R52 PolarHBondContact O-N 2.79Å
51N67.3Low73.5Confident123 Ų123100.2 Ų100.266%0.65852%0.518SS*.SBendtrans62.926.6173-59.5-39.9000116.3K61N51-K61 PolarHBondContact OD1-NZ 3.14Å
52R70.3Confident74.2Confident144 Ų14498.2 Ų98.254%0.54352%0.516SS..  trans-61.7134.6172.8-73.5173.6177.3174.20.4111D48 N49 T50 N54D48-R52 PolarHBondContact O-NE 2.97Å; D48-R52 PolarHBondContact O-NH2 3.16Å; N49-R52 PolarHBondContact OD1-NH1 3.02Å; N49-R52 PolarHBondContact OD1-NH2 2.83Å; T50-R52 PolarHBondContact O-N 2.79Å; R52-N54 PolarHBondContact O-N 2.95Å
53P69.3Low74.8Confident137 Ų13799.2 Ų99.289%0.8952%0.519SS*.  trans-72.184.517530-32.9000108.9
54N64.9Low75.6Confident88 Ų8895.2 Ų95.247%0.47150%0.503SS..  trans-98.6130.9168.8-177-6.7000106.9R52 G56 G57R52-N54 PolarHBondContact O-N 2.95Å; N54-G56 PolarHBondContact O-N 3.34Å; N54-G57 WeakPolarHBondContact O-CA 3.37Å; N54-G57 PolarHBondContact O-N 2.95Å
55P72.4Confident76.2Confident124 Ų12493.8 Ų93.881%0.80550%0.497SS*.THydrogen-bonded Turntrans-50.4123.9169.420.4-32.5000110.2G57P55-G57 PolarHBondContact O-N 2.92Å
56G71.7Confident77.6Confident40 Ų4094.4 Ų94.441%0.41250%0.503SS..THydrogen-bonded Turntrans72.8-2.1-173.800000115.8N54 H58 R60N54-G56 PolarHBondContact O-N 3.34Å; G56-H58 VanDerWaalsContact C-N 3.35Å; G56-H58 PolarHBondContact O-N 2.92Å; G56-R60 WeakPolarHBondContact O-CB 3.44Å; G56-R60 PolarHBondContact O-N 3.09Å
57G77.6Confident78.6Confident12 Ų1297.3 Ų97.312%0.12451%0.511CS..Hα-helixtrans-67.8-32.9177.300000113.5N54 P55 K61N54-G57 WeakPolarHBondContact O-CA 3.37Å; N54-G57 PolarHBondContact O-N 2.95Å; P55-G57 PolarHBondContact O-N 2.92Å; G57-K61 VanDerWaalsContact O-CB 3.29Å; G57-K61 WeakPolarHBondContact O-CB 3.42Å; G57-K61 PolarHBondContact O-N 3.21Å
58H79.2Confident79.4Confident138 Ų13897.3 Ų97.364%0.63951%0.505SS*.Hα-helixtrans-64.6-48.9175.6-173.772.5000111.4G56 K61 L62G56-H58 VanDerWaalsContact C-N 3.35Å; G56-H58 PolarHBondContact O-N 2.92Å; H58-K61 PolarHBondContact O-N 3.26Å; H58-L62 PolarHBondContact O-N 3.36Å
59E82.3Confident80.4Confident138 Ų13897.8 Ų97.865%0.64551%0.511SS*.Hα-helixtrans-61.1-48.5177.6-65.2164.7-17500111.1K61 L62 V63E59-K61 VanDerWaalsContact C-N 3.29Å; E59-K61 PolarHBondContact O-N 3.34Å; E59-L62 WeakPolarHBondContact O-CB 3.36Å; E59-L62 PolarHBondContact O-N 3.45Å; E59-L62 VanDerWaalsContact O-N 3.13Å; E59-V63 WeakPolarHBondContact O-CG2 3.39Å; E59-V63 PolarHBondContact O-N 2.8Å
60R84.6Confident81.5Confident152 Ų15299 Ų9957%0.57451%0.514SS*.Hα-helixtrans-58.8-39.7176.4-174.5170.756.892.8-0.1112.5G56 V63 E64G56-R60 WeakPolarHBondContact O-CB 3.44Å; G56-R60 PolarHBondContact O-N 3.09Å; R60-V63 PolarHBondContact O-N 3.32Å; R60-E64 WeakPolarHBondContact O-CB 3.26Å; R60-E64 PolarHBondContact O-N 3.22Å
61K83.9Confident82.5Confident57 Ų57102.3 Ų102.325%0.24852%0.523CS..Hα-helixtrans-66.6-39.4176.6-178.5170.7-176.4168.50112.3N51 G57 H58 E59 K65N51-K61 PolarHBondContact OD1-NZ 3.14Å; G57-K61 VanDerWaalsContact O-CB 3.29Å; G57-K61 WeakPolarHBondContact O-CB 3.42Å; G57-K61 PolarHBondContact O-N 3.21Å; H58-K61 PolarHBondContact O-N 3.26Å; E59-K61 VanDerWaalsContact C-N 3.29Å; E59-K61 PolarHBondContact O-N 3.34Å; K61-K65 WeakPolarHBondContact O-CB 3.13Å; K61-K65 WeakPolarHBondContact O-CG 3.48Å; K61-K65 PolarHBondContact O-N 3.33Å
62L85.4Confident83.4Confident84 Ų84104.6 Ų104.644%0.4453%0.527SS..Hα-helixtrans-62.9-48.6174.9-76.4169.3000110.8H58 E59 E64 K65 L66H58-L62 PolarHBondContact O-N 3.36Å; E59-L62 WeakPolarHBondContact O-CB 3.36Å; E59-L62 PolarHBondContact O-N 3.45Å; E59-L62 VanDerWaalsContact O-N 3.13Å; L62-E64 PolarHBondContact O-N 3.21Å; L62-K65 PolarHBondContact O-N 3.43Å; L62-L66 PolarHBondContact O-N 3.21Å
63V88.8Confident84.2Confident76 Ų76101.8 Ų101.846%0.46154%0.535SS..Hα-helixtrans-58.3-47.4177.2173.50000111.2E59 R60 K65 L66 Q67E59-V63 WeakPolarHBondContact O-CG2 3.39Å; E59-V63 PolarHBondContact O-N 2.8Å; R60-V63 PolarHBondContact O-N 3.32Å; V63-K65 VanDerWaalsContact C-N 3.34Å; V63-K65 PolarHBondContact O-N 2.93Å; V63-L66 PolarHBondContact O-N 2.95Å; V63-Q67 HydrophobicContact CG1-CG 4.39Å; V63-Q67 WeakPolarHBondContact O-CG 3.16Å; V63-Q67 PolarHBondContact O-N 2.94Å
64E89.1Confident84.5Confident101 Ų101103.7 Ų103.747%0.47253%0.529SS..Hα-helixtrans-62.4-39.7179.1-174.6177.5-174.400112.1R60 L62 N68R60-E64 WeakPolarHBondContact O-CB 3.26Å; R60-E64 PolarHBondContact O-N 3.22Å; L62-E64 PolarHBondContact O-N 3.21Å; E64-N68 VanDerWaalsContact O-CB 3.31Å; E64-N68 WeakPolarHBondContact O-CB 3.13Å; E64-N68 PolarHBondContact O-N 3.12Å; E64-N68 PolarHBondContact O-ND2 3.41Å; E64-N68 VanDerWaalsContact O-ND2 3.07Å
65K89.9Confident84.5Confident120 Ų120106 Ų10652%0.52256%0.56SS.*Hα-helixtrans-64.1-44174.8-80.9-178.9171-173.10112.3K61 L62 V63 N68 T69K61-K65 WeakPolarHBondContact O-CB 3.13Å; K61-K65 WeakPolarHBondContact O-CG 3.48Å; K61-K65 PolarHBondContact O-N 3.33Å; L62-K65 PolarHBondContact O-N 3.43Å; V63-K65 VanDerWaalsContact C-N 3.34Å; V63-K65 PolarHBondContact O-N 2.93Å; K65-N68 PolarHBondContact O-N 3.08Å; K65-T69 WeakPolarHBondContact O-CB 3.22Å; K65-T69 PolarHBondContact O-N 3.31Å; K65-T69 PolarHBondContact O-OG1 3.49Å
66L93.4Very high85.1Confident108 Ų108105.2 Ų105.257%0.56555%0.548SS*.Hα-helixtrans-59.3-54.4176.8-84.5151.9000110.5L62 V63 N68 T69 E70L62-L66 PolarHBondContact O-N 3.21Å; V63-L66 PolarHBondContact O-N 2.95Å; L66-N68 VanDerWaalsContact C-N 3.33Å; L66-N68 PolarHBondContact O-N 2.82Å; L66-T69 WeakPolarHBondContact O-CB 3.46Å; L66-T69 PolarHBondContact O-N 2.79Å; L66-T69 VanDerWaalsContact O-N 3.11Å; L66-E70 PolarHBondContact O-N 2.77Å
67Q92.4Very high85.8Confident98 Ų98108.6 Ų108.646%0.45856%0.555SS.*Hα-helixtrans-58.5-41.5179.4-70.6178.9-11.500113V63 K71V63-Q67 HydrophobicContact CG1-CG 4.39Å; V63-Q67 WeakPolarHBondContact O-CG 3.16Å; V63-Q67 PolarHBondContact O-N 2.94Å; Q67-K71 WeakPolarHBondContact O-CB 3.37Å; Q67-K71 VanDerWaalsContact O-CG 3.26Å; Q67-K71 WeakPolarHBondContact O-CG 3.39Å; Q67-K71 PolarHBondContact O-N 3.02Å
68N91.2Very high86.3Confident71 Ų71113.9 Ų113.938%0.3858%0.579SS.*Hα-helixtrans-68.3-35.8178.4-75.3-30.2000112.4E64 K65 L66 K72E64-N68 VanDerWaalsContact O-CB 3.31Å; E64-N68 WeakPolarHBondContact O-CB 3.13Å; E64-N68 PolarHBondContact O-N 3.12Å; E64-N68 PolarHBondContact O-ND2 3.41Å; E64-N68 VanDerWaalsContact O-ND2 3.07Å; K65-N68 PolarHBondContact O-N 3.08Å; L66-N68 VanDerWaalsContact C-N 3.33Å; L66-N68 PolarHBondContact O-N 2.82Å; N68-K72 WeakPolarHBondContact O-CG 3.28Å; N68-K72 PolarHBondContact O-N 3.24Å; N68-K72 VanDerWaalsContact O-N 3.09Å
69T93.3Very high86.7Confident94 Ų94112.5 Ų112.558%0.57758%0.576SS**Hα-helixtrans-66.3-45.8176.1-54.50000110.4K65 L66 K71 K72 A73K65-T69 WeakPolarHBondContact O-CB 3.22Å; K65-T69 PolarHBondContact O-N 3.31Å; K65-T69 PolarHBondContact O-OG1 3.49Å; L66-T69 WeakPolarHBondContact O-CB 3.46Å; L66-T69 PolarHBondContact O-N 2.79Å; L66-T69 VanDerWaalsContact O-N 3.11Å; T69-K71 PolarHBondContact O-N 2.92Å; T69-K72 PolarHBondContact O-N 3.47Å; T69-A73 PolarHBondContact O-N 3.24Å
70E94Very high87Confident107 Ų107110.9 Ų110.950%0.557%0.571SS.*Hα-helixtrans-60.8-45175.6-71.2179.2-173.800112.6L66 K72 A73 K74L66-E70 PolarHBondContact O-N 2.77Å; E70-K72 VanDerWaalsContact C-N 3.29Å; E70-K72 PolarHBondContact O-N 3.42Å; E70-A73 PolarHBondContact O-N 3.1Å; E70-K74 WeakPolarHBondContact O-CG 3.49Å; E70-K74 PolarHBondContact O-N 2.82Å
71K92Very high87.1Confident137 Ų137108.2 Ų108.260%0.59657%0.571SS**Hα-helixtrans-60.3-39.4177.2-75.2172.5-175.8176.70112.1Q67 T69 K74 A75Q67-K71 WeakPolarHBondContact O-CB 3.37Å; Q67-K71 VanDerWaalsContact O-CG 3.26Å; Q67-K71 WeakPolarHBondContact O-CG 3.39Å; Q67-K71 PolarHBondContact O-N 3.02Å; T69-K71 PolarHBondContact O-N 2.92Å; K71-K74 PolarHBondContact O-N 2.87Å; K71-A75 PolarHBondContact O-N 2.99Å
72K86.3Confident87.4Confident170 Ų170111.9 Ų111.974%0.73959%0.594SS**Hα-helixtrans-70.8-32.7176.2-76.2-177178.5-170.20113.2N68 T69 E70 K74N68-K72 WeakPolarHBondContact O-CG 3.28Å; N68-K72 PolarHBondContact O-N 3.24Å; N68-K72 VanDerWaalsContact O-N 3.09Å; T69-K72 PolarHBondContact O-N 3.47Å; E70-K72 VanDerWaalsContact C-N 3.29Å; E70-K72 PolarHBondContact O-N 3.42Å; K72-K74 VanDerWaalsContact C-N 3.31Å
73A87.8Confident87.5Confident86 Ų86114 Ų11471%0.71161%0.606SS**Hα-helixtrans-74.2-23.8177.100000112.7T69 E70T69-A73 PolarHBondContact O-N 3.24Å; E70-A73 PolarHBondContact O-N 3.1Å
74K75.5Confident87.4Confident177 Ų177117.2 Ų117.277%0.7762%0.618SS**  trans-88-13.8177.7-71.3177.4-178.9178.20114.3E70 K71 K72E70-K74 WeakPolarHBondContact O-CG 3.49Å; E70-K74 PolarHBondContact O-N 2.82Å; K71-K74 PolarHBondContact O-N 2.87Å; K72-K74 VanDerWaalsContact C-N 3.31Å
75A64.3Low87.3Confident137 Ų137118.6 Ų118.6100%1.13263%0.632SS**  trans-98.40-179.700000110.4K71K71-A75 PolarHBondContact O-N 2.99Å

Retrieved 75 of 75 residues in 107.2 ms (Link to these results)