A0A087Y4U2_POEFO Loading...

Anaphase-promoting complex subunit 13

Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. The APC/C complex catalyzes assembly of branched 'Lys-11'-/'Lys-48'-linked branched ubiquitin chains on target proteins.

AlphaFold DB (A0A3P9MVP0), UniProt , Accession A0A087Y4U2, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 74 aa.

Structure Viewer
Loading PAE data...
(Predicted Aligned Error values between residue pairs)
Error loading PAE data: please refresh the page.

Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M73.1Confident88.1Confident176 Ų176139.2 Ų139.287%0.86770%0.703SS**  0116.30-116.7146.970.300105.9S3 E4M1-S3 PolarHBondContact O-N 3.01Å; M1-S3 VanDerWaalsContact O-N 3.1Å; M1-E4 PolarHBondContact O-N 2.71Å
2D83.9Confident88.4Confident177 Ų177134.4 Ų134.495%0.94768%0.68SS**THydrogen-bonded Turntrans-71.6-4.6-173.5-52.5-33.7000112.8
3S91.3Very high88.8Confident101 Ų101135.4 Ų135.471%0.70669%0.688SS**THydrogen-bonded Turntrans-83-10.9175.150.90000114.3M1M1-S3 PolarHBondContact O-N 3.01Å; M1-S3 VanDerWaalsContact O-N 3.1Å
4E88.5Confident89.3Confident144 Ų144134.4 Ų134.467%0.67368%0.684SS**SBendtrans-107.3131177-83.3-17988.900111.6M1M1-E4 PolarHBondContact O-N 2.71Å
5I87.7Confident89.7Confident139 Ų139127 Ų12771%0.71365%0.648SS**PPolyproline II helixtrans-83125.5175.5-130.6159.3000109.5R7I5-R7 HydrophobicContact CG2-CG 4.22Å; I5-R7 PolarHBondContact O-N 3.11Å
6Q88Confident90.1Very high196 Ų196125.3 Ų125.392%0.91664%0.641SS**PPolyproline II helixtrans-72118.7170.1-75.8-178.9-14.400108.7
7R87.9Confident90.4Very high186 Ų186124.4 Ų124.470%0.70264%0.638SS**PPolyproline II helixtrans-87.6142.5174.5-64.9-174.9173.685.8-1.9109.8I5 G9 L12I5-R7 HydrophobicContact CG2-CG 4.22Å; I5-R7 PolarHBondContact O-N 3.11Å; R7-G9 PolarHBondContact O-N 3.48Å; R7-L12 HydrophobicContact CB-CD1 4.04Å
8D92.8Very high90.8Very high99 Ų99121.4 Ų121.453%0.52964%0.635SS.*  trans-71.2113.2174.3-174.4-14.7000110R10 V11 L12D8-R10 PolarHBondContact O-N 3.27Å; D8-R10 WeakPolarHBondContact OD1-CB 3.22Å; D8-R10 PolarHBondContact OD1-N 2.73Å; D8-V11 HydrophobicContact CB-CB 4.2Å; D8-V11 HydrophobicContact CB-CG2 3.88Å; D8-V11 PolarHBondContact O-N 3.18Å; D8-V11 VanDerWaalsContact O-N 3.17Å; D8-L12 PolarHBondContact O-N 3.18Å
9G90.4Very high91Very high48 Ų48123.6 Ų123.650%0.49563%0.634SS.*Hα-helixtrans-60.5-30.5-179.800000113.5R7 L12 D13R7-G9 PolarHBondContact O-N 3.48Å; G9-L12 PolarHBondContact O-N 3.16Å; G9-D13 PolarHBondContact O-N 3.06Å
10R93.9Very high91.2Very high186 Ų186123.5 Ų123.570%0.70263%0.625SS**Hα-helixtrans-69.6-37.4177.3-176.5-179.7179.2-164.1-0.8111.5D8 L12 D13 L14D8-R10 PolarHBondContact O-N 3.27Å; D8-R10 WeakPolarHBondContact OD1-CB 3.22Å; D8-R10 PolarHBondContact OD1-N 2.73Å; R10-L12 VanDerWaalsContact C-N 3.32Å; R10-D13 PolarHBondContact O-N 3.13Å; R10-L14 HydrophobicContact CG-CD1 4.06Å; R10-L14 VanDerWaalsContact O-CG 3.29Å; R10-L14 WeakPolarHBondContact O-CG 3.48Å; R10-L14 PolarHBondContact O-N 3.11Å; R10-L14 VanDerWaalsContact O-N 3.13Å
11V92.1Very high91.5Very high79 Ų79124.9 Ų124.948%0.47963%0.63SS.*Hα-helixtrans-65.5-41175.4176.40000109.9D8 D13 L14 T15D8-V11 HydrophobicContact CB-CB 4.2Å; D8-V11 HydrophobicContact CB-CG2 3.88Å; D8-V11 PolarHBondContact O-N 3.18Å; D8-V11 VanDerWaalsContact O-N 3.17Å; V11-D13 VanDerWaalsContact C-N 3.33Å; V11-D13 PolarHBondContact O-N 3.21Å; V11-L14 PolarHBondContact O-N 3.48Å; V11-T15 PolarHBondContact O-N 3.11Å; V11-T15 PolarHBondContact O-OG1 3.39Å; V11-T15 VanDerWaalsContact O-OG1 3.04Å
12L91.4Very high92.6Very high82 Ų82121.8 Ų121.843%0.42962%0.617SS.*Hα-helixtrans-65.3-34.2175.9-63.7178.3000113.1R7 D8 G9 R10 R20R7-L12 HydrophobicContact CB-CD1 4.04Å; D8-L12 PolarHBondContact O-N 3.18Å; G9-L12 PolarHBondContact O-N 3.16Å; R10-L12 VanDerWaalsContact C-N 3.32Å; L12-R20 PolarHBondContact O-NH2 2.99Å
13D93.6Very high93.2Very high147 Ų147123.9 Ų123.979%0.78661%0.611SS**Hα-helixtrans-74.4-29.4178.9-165.444.9000112.8G9 R10 V11G9-D13 PolarHBondContact O-N 3.06Å; R10-D13 PolarHBondContact O-N 3.13Å; V11-D13 VanDerWaalsContact C-N 3.33Å; V11-D13 PolarHBondContact O-N 3.21Å
14L96.3Very high93.5Very high121 Ų121126.3 Ų126.363%0.63462%0.616SS**Hα-helixtrans-83.6-28.7-179.6-71.5171.5000114R10 V11R10-L14 HydrophobicContact CG-CD1 4.06Å; R10-L14 VanDerWaalsContact O-CG 3.29Å; R10-L14 WeakPolarHBondContact O-CG 3.48Å; R10-L14 PolarHBondContact O-N 3.11Å; R10-L14 VanDerWaalsContact O-N 3.13Å; V11-L14 PolarHBondContact O-N 3.48Å
15T94.3Very high93.8Very high24 Ų24123.9 Ų123.915%0.14761%0.612CS.*  trans-85.1120.3-178.8-52.30000110.3V11 W19 R20V11-T15 PolarHBondContact O-N 3.11Å; V11-T15 PolarHBondContact O-OG1 3.39Å; V11-T15 VanDerWaalsContact O-OG1 3.04Å; T15-W19 HydrophobicContact CG2-CB 4.07Å; T15-W19 HydrophobicContact CG2-CD2 3.88Å; T15-W19 HydrophobicContact CG2-CE3 3.59Å; T15-W19 HydrophobicContact CG2-CG 4.12Å; T15-W19 HydrophobicContact CG2-CZ3 4.26Å; T15-R20 HydrophobicContact CG2-CG 3.6Å; T15-R20 PolarHBondContact O-NH1 3.07Å; T15-R20 PolarHBondContact O-NH2 3.43Å
16D95.9Very high94.2Very high99 Ų99128.3 Ų128.353%0.52962%0.622SS.*  trans-80.9170.4171.667.314.6000112.2A18 W19 R20D16-A18 VanDerWaalsContact C-N 3.31Å; D16-A18 PolarHBondContact O-N 3.46Å; D16-A18 PolarHBondContact OD1-N 2.9Å; D16-W19 PolarHBondContact O-N 3.36Å; D16-W19 WeakPolarHBondContact OD1-CB 3.41Å; D16-W19 PolarHBondContact OD1-N 3.26Å; D16-R20 WeakPolarHBondContact O-CG 3.39Å; D16-R20 PolarHBondContact O-N 3.26Å; D16-R20 VanDerWaalsContact O-N 3.12Å
17D95.9Very high94.6Very high110 Ų110126.7 Ų126.759%0.58861%0.614SS**Hα-helixtrans-69.3-32-175.5-63.9-25.6000112.2W19 R20 E21D17-W19 PolarHBondContact O-N 3.3Å; D17-R20 PolarHBondContact O-N 3.22Å; D17-R20 IonicContact OD1-NH1 2.74Å; D17-R20 PolarHBondContact OD1-NH1 3.24Å; D17-E21 WeakPolarHBondContact O-CG 3.44Å; D17-E21 PolarHBondContact O-N 3.29Å
18A96.7Very high94.9Very high71 Ų71125.6 Ų125.659%0.58762%0.622SS**Hα-helixtrans-61.7-44.617600000111.6D16 E21 D22D16-A18 VanDerWaalsContact C-N 3.31Å; D16-A18 PolarHBondContact O-N 3.46Å; D16-A18 PolarHBondContact OD1-N 2.9Å; A18-E21 PolarHBondContact O-N 3.16Å; A18-D22 PolarHBondContact O-N 3.41Å
19W96.1Very high94.9Very high164 Ų164126.2 Ų126.262%0.62163%0.629SS**Hα-helixtrans-71.2-31.8177.5-173.820.4000112.6T15 D16 D17 E21 D22T15-W19 HydrophobicContact CG2-CB 4.07Å; T15-W19 HydrophobicContact CG2-CD2 3.88Å; T15-W19 HydrophobicContact CG2-CE3 3.59Å; T15-W19 HydrophobicContact CG2-CG 4.12Å; T15-W19 HydrophobicContact CG2-CZ3 4.26Å; D16-W19 PolarHBondContact O-N 3.36Å; D16-W19 WeakPolarHBondContact OD1-CB 3.41Å; D16-W19 PolarHBondContact OD1-N 3.26Å; D17-W19 PolarHBondContact O-N 3.3Å; W19-E21 VanDerWaalsContact C-N 3.28Å; W19-E21 PolarHBondContact O-N 2.96Å; W19-D22 PolarHBondContact O-N 3.08Å
20R94.3Very high95.2Very high120 Ų120129.4 Ų129.445%0.45364%0.644SS.*Hα-helixtrans-64-35173.6-74.9179176.2110.513.9113L12 T15 D16 D17L12-R20 PolarHBondContact O-NH2 2.99Å; T15-R20 HydrophobicContact CG2-CG 3.6Å; T15-R20 PolarHBondContact O-NH1 3.07Å; T15-R20 PolarHBondContact O-NH2 3.43Å; D16-R20 WeakPolarHBondContact O-CG 3.39Å; D16-R20 PolarHBondContact O-N 3.26Å; D16-R20 VanDerWaalsContact O-N 3.12Å; D17-R20 PolarHBondContact O-N 3.22Å; D17-R20 IonicContact OD1-NH1 2.74Å; D17-R20 PolarHBondContact OD1-NH1 3.24Å
21E97.1Very high95.1Very high154 Ų154125 Ų12572%0.7263%0.633SS**Hα-helixtrans-91.8-12.6-176.6-65.7-176.3139.600113D17 A18 W19D17-E21 WeakPolarHBondContact O-CG 3.44Å; D17-E21 PolarHBondContact O-N 3.29Å; A18-E21 PolarHBondContact O-N 3.16Å; W19-E21 VanDerWaalsContact C-N 3.28Å; W19-E21 PolarHBondContact O-N 2.96Å
22D96.9Very high95.2Very high111 Ų111125 Ų12559%0.59464%0.635SS**  trans-59.7139.9-178.8-17151.1000112.4A18 W19A18-D22 PolarHBondContact O-N 3.41Å; W19-D22 PolarHBondContact O-N 3.08Å
23R96.9Very high95.2Very high221 Ų221127.3 Ų127.383%0.83465%0.647SS**  trans-134.7132.5179.7-65.8-179.9-176.6-119.9-0.4108.9
24L96Very high95.1Very high152 Ų152122.9 Ų122.980%0.79663%0.628SS**PPolyproline II helixtrans-61.7142.3172.8-65.2176000110.4
25P96.2Very high94.9Very high93 Ų93121.6 Ų121.660%0.60462%0.618SS**PPolyproline II helixtrans-66.1159.9174.529.2-34.7000111.3E27P25-E27 PolarHBondContact O-N 3.11Å
26Y95.9Very high94.7Very high232 Ų232123.9 Ų123.991%0.9163%0.629SS**PPolyproline II helixtrans-80116.2166.5-66.2-79.3000108.6
27E95.9Very high94.4Very high161 Ų161122.5 Ų122.575%0.75263%0.626SS**PPolyproline II helixtrans-92.8142174.4-68.4-73.2113.500110P25P25-E27 PolarHBondContact O-N 3.11Å
28D95.3Very high94Very high163 Ų163121.5 Ų121.587%0.87262%0.617SS**PPolyproline II helixtrans-76.8148.2175.7-70.7-43.4000111.6
29V92.6Very high93Very high113 Ų113123 Ų12369%0.68563%0.63SS**PPolyproline II helixtrans-89.7136.5173.7-177.40000109.4I31V29-I31 HydrophobicContact CB-CD1 4.09Å; V29-I31 HydrophobicContact CG1-CD1 3.98Å; V29-I31 WeakPolarHBondContact O-CG1 3.36Å; V29-I31 PolarHBondContact O-N 3.33Å; V29-I31 VanDerWaalsContact O-N 3.16Å
30S95.1Very high91.6Very high114 Ų114123.8 Ų123.880%0.79764%0.64SS**  trans-67.5111.2172.359.20000110.6
31I93.3Very high90.1Very high93 Ų93121 Ų12148%0.47763%0.633SS.*  trans-100.8131179.3-49.3-56.9000110.1V29 L33 L36V29-I31 HydrophobicContact CB-CD1 4.09Å; V29-I31 HydrophobicContact CG1-CD1 3.98Å; V29-I31 WeakPolarHBondContact O-CG1 3.36Å; V29-I31 PolarHBondContact O-N 3.33Å; V29-I31 VanDerWaalsContact O-N 3.16Å; I31-L33 PolarHBondContact O-N 3.11Å; I31-L36 HydrophobicContact CG2-CD1 3.74Å; I31-L36 HydrophobicContact CG2-CD2 4.11Å; I31-L36 HydrophobicContact CG2-CG 4.07Å
32P94.1Very high88.3Confident79 Ų79121.7 Ų121.751%0.51364%0.641SS.*  trans-72.892.4173.130.3-33.8000109.9S34 E35P32-S34 PolarHBondContact O-N 3.28Å; P32-S34 VanDerWaalsContact O-N 3.08Å; P32-E35 HydrophobicContact CB-CB 4.46Å; P32-E35 HydrophobicContact CB-CG 4.02Å; P32-E35 HydrophobicContact CG-CB 4.22Å; P32-E35 HydrophobicContact CG-CG 4.05Å; P32-E35 WeakPolarHBondContact O-CB 3.49Å; P32-E35 PolarHBondContact O-N 2.63Å
33L90.8Very high86.4Confident131 Ų131124 Ų12469%0.68665%0.653SS**G310 helixtrans-56.3-28.7-175.7-62.7178.5000113.6I31 E35 L36I31-L33 PolarHBondContact O-N 3.11Å; L33-E35 PolarHBondContact O-N 2.61Å; L33-L36 HydrophobicContact CD2-CD1 3.92Å; L33-L36 WeakPolarHBondContact O-CB 3.3Å; L33-L36 PolarHBondContact O-N 3.42Å; L33-L36 VanDerWaalsContact O-N 3.09Å
34S92Very high84.5Confident55 Ų55117 Ų11739%0.38565%0.651SS.*G310 helixtrans-64.3-23.9176.760.70000113.9P32 S49 V50 K51P32-S34 PolarHBondContact O-N 3.28Å; P32-S34 VanDerWaalsContact O-N 3.08Å; S34-S49 WeakPolarHBondContact O-CB 3.4Å; S34-V50 PolarHBondContact O-N 3.16Å; S34-K51 WeakPolarHBondContact O-CB 3.37Å; S34-K51 PolarHBondContact O-N 2.84Å
35E91.7Very high82.9Confident93 Ų93112.5 Ų112.544%0.43564%0.641SS.*G310 helixtrans-91-3.1177.8-56.8-7116500111.6P32 L33 S49 K51P32-E35 HydrophobicContact CB-CB 4.46Å; P32-E35 HydrophobicContact CB-CG 4.02Å; P32-E35 HydrophobicContact CG-CB 4.22Å; P32-E35 HydrophobicContact CG-CG 4.05Å; P32-E35 WeakPolarHBondContact O-CB 3.49Å; P32-E35 PolarHBondContact O-N 2.63Å; L33-E35 PolarHBondContact O-N 2.61Å; E35-S49 VanDerWaalsContact C-CB 3.41Å; E35-S49 WeakPolarHBondContact O-CB 3.2Å; E35-K51 WeakPolarHBondContact OE1-CD 3.38Å; E35-K51 IonicContact OE1-NZ 2.61Å; E35-K51 PolarHBondContact OE1-NZ 3.46Å
36L90.8Very high81.5Confident73 Ų73110.3 Ų110.338%0.38263%0.627SS.*SBendtrans-93.9152174.5-58.8-176.1000110.6I31 L33 S49 V50I31-L36 HydrophobicContact CG2-CD1 3.74Å; I31-L36 HydrophobicContact CG2-CD2 4.11Å; I31-L36 HydrophobicContact CG2-CG 4.07Å; L33-L36 HydrophobicContact CD2-CD1 3.92Å; L33-L36 WeakPolarHBondContact O-CB 3.3Å; L33-L36 PolarHBondContact O-N 3.42Å; L33-L36 VanDerWaalsContact O-N 3.09Å; L36-S49 WeakPolarHBondContact O-CA 3.36Å; L36-V50 PolarHBondContact O-N 3.49Å; L36-V50 VanDerWaalsContact O-N 3.08Å
37P89.8Confident80.8Confident69 Ų69105.8 Ų105.845%0.44862%0.624SS.*PPolyproline II helixtrans-67.1156.1168.429.1-34.5000111.3E48P37-E48 WeakPolarHBondContact CA-O 3.04Å
38E86.4Confident80.4Confident89 Ų89100.1 Ų100.142%0.41660%0.597SS.*PPolyproline II helixtrans-61.9134.9175-68-17798.900111.5E40 Q41 V50 Q53E38-E40 VanDerWaalsContact C-N 3.32Å; E38-E40 PolarHBondContact O-N 3.29Å; E38-Q41 HydrophobicContact CB-CG 4.01Å; E38-Q41 PolarHBondContact OE2-NE2 2.74Å; E38-V50 HydrophobicContact CG-CG2 3.77Å; E38-Q53 PolarHBondContact OE2-NE2 2.97Å; E38-Q53 PolarHBondContact OE2-OE1 3.09Å
39A75.4Confident80.2Confident102 Ų10292.5 Ų92.584%0.84356%0.557SS**THydrogen-bonded Turntrans-70.5-25.3-177.500000113.9
40E67.1Low80.1Confident181 Ų18189.1 Ų89.185%0.84654%0.537SS*.THydrogen-bonded Turntrans-10127-167.3-61.2-92107.500113.1E38 D42E38-E40 VanDerWaalsContact C-N 3.32Å; E38-E40 PolarHBondContact O-N 3.29Å; E40-D42 VanDerWaalsContact C-N 3.32Å; E40-D42 PolarHBondContact O-N 2.94Å
41Q63.8Low80.1Confident63 Ų6387.5 Ų87.529%0.29452%0.515SS..  trans-78.482.7179.2-62-149.2-22.600111.8E38 N43E38-Q41 HydrophobicContact CB-CG 4.01Å; E38-Q41 PolarHBondContact OE2-NE2 2.74Å; Q41-N43 PolarHBondContact O-N 3.08Å; Q41-N43 VanDerWaalsContact O-N 3.16Å
42D59Low80.1Confident167 Ų16787.8 Ų87.889%0.89352%0.515SS*.THydrogen-bonded Turntrans-58.3-20.6173.7-171.237000112.7E40E40-D42 VanDerWaalsContact C-N 3.32Å; E40-D42 PolarHBondContact O-N 2.94Å
43N56.2Low79.9Confident160 Ų16087.9 Ų87.986%0.85651%0.508SS*.THydrogen-bonded Turntrans-113.253.5-174.2-155.844.8000114Q41Q41-N43 PolarHBondContact O-N 3.08Å; Q41-N43 VanDerWaalsContact O-N 3.16Å
44G57.1Low79.9Confident75 Ų7588.9 Ų88.977%0.77351%0.51SS*.THydrogen-bonded Turntrans65.666.3160.800000115.5
45G62.6Low80Confident57 Ų5793 Ų9359%0.58852%0.524SS*.  trans68.472141.400000117.8T47G45-T47 PolarHBondContact O-N 2.68Å
46S66.9Low80.1Confident46 Ų4693.7 Ų93.732%0.32253%0.526SS..  trans-68.6117.8148.7-164.50000108.2E48S46-E48 PolarHBondContact O-N 2.87Å; S46-E48 WeakPolarHBondContact OG-CB 3.04Å
47T80.5Confident80.2Confident138 Ų138101.2 Ų101.285%0.84755%0.549SS*.  trans-78.92.7171.158.30000112.4G45G45-T47 PolarHBondContact O-N 2.68Å
48E87.4Confident80.3Confident41 Ų41103.9 Ų103.919%0.19257%0.565CS.*SBendtrans-83.8141.3-175.5-171.6170.789.600110.9P37 S46 E52 Q53 K56P37-E48 WeakPolarHBondContact CA-O 3.04Å; S46-E48 PolarHBondContact O-N 2.87Å; S46-E48 WeakPolarHBondContact OG-CB 3.04Å; E48-E52 HydrophobicContact CG-CB 3.25Å; E48-E52 HydrophobicContact CG-CG 4.2Å; E48-Q53 VanDerWaalsContact OE1-CA 3.3Å; E48-Q53 WeakPolarHBondContact OE1-CA 3.33Å; E48-Q53 PolarHBondContact OE1-N 3.26Å; E48-K56 VanDerWaalsContact CD-CE 3.43Å; E48-K56 WeakPolarHBondContact OE1-CE 3.22Å; E48-K56 IonicContact OE1-NZ 2.98Å; E48-K56 PolarHBondContact OE1-NZ 3.37Å; E48-K56 WeakPolarHBondContact OE2-CE 3.4Å; E48-K56 IonicContact OE2-NZ 2.63Å; E48-K56 PolarHBondContact OE2-NZ 3.17Å
49S91.8Very high80.6Confident4 Ų4104.1 Ų104.13%0.02857%0.569CS.*  trans-69.7155.5175.966.80000112.2S34 E35 L36 K51 E52 Q53S34-S49 WeakPolarHBondContact O-CB 3.4Å; E35-S49 VanDerWaalsContact C-CB 3.41Å; E35-S49 WeakPolarHBondContact O-CB 3.2Å; L36-S49 WeakPolarHBondContact O-CA 3.36Å; S49-K51 PolarHBondContact O-N 3.41Å; S49-E52 WeakPolarHBondContact CB-OE2 3.48Å; S49-E52 PolarHBondContact N-OE2 3.12Å; S49-E52 PolarHBondContact O-N 3.47Å; S49-E52 VanDerWaalsContact O-N 3.11Å; S49-E52 WeakPolarHBondContact OG-CB 3.48Å; S49-E52 VanDerWaalsContact OG-CG 3.24Å; S49-E52 WeakPolarHBondContact OG-CG 3.24Å; S49-E52 PolarHBondContact OG-N 3.45Å; S49-E52 PolarHBondContact OG-OE2 3.36Å; S49-Q53 PolarHBondContact O-N 3.45Å; S49-Q53 VanDerWaalsContact O-N 3.11Å
50V90.8Very high81.4Confident42 Ų42105.4 Ų105.426%0.25556%0.561SS.*Hα-helixtrans-51.1-44.6174.41740000111.1S34 L36 E38 E52 Q53 E54S34-V50 PolarHBondContact O-N 3.16Å; L36-V50 PolarHBondContact O-N 3.49Å; L36-V50 VanDerWaalsContact O-N 3.08Å; E38-V50 HydrophobicContact CG-CG2 3.77Å; V50-E52 PolarHBondContact O-N 3.05Å; V50-Q53 WeakPolarHBondContact O-CB 3.49Å; V50-Q53 PolarHBondContact O-N 3.49Å; V50-E54 WeakPolarHBondContact O-CG 3.41Å; V50-E54 PolarHBondContact O-N 3.39Å
51K93.8Very high82.4Confident80 Ų8099.1 Ų99.135%0.34854%0.539SS..Hα-helixtrans-61.7-41.6-179.7177177.9164.9-171.20113.1S34 E35 S49 Q53 M55S34-K51 WeakPolarHBondContact O-CB 3.37Å; S34-K51 PolarHBondContact O-N 2.84Å; E35-K51 WeakPolarHBondContact OE1-CD 3.38Å; E35-K51 IonicContact OE1-NZ 2.61Å; E35-K51 PolarHBondContact OE1-NZ 3.46Å; S49-K51 PolarHBondContact O-N 3.41Å; K51-Q53 VanDerWaalsContact C-N 3.34Å; K51-M55 HydrophobicContact CD-CE 4.39Å; K51-M55 HydrophobicContact CG-CE 3.76Å; K51-M55 WeakPolarHBondContact O-CG 3.45Å; K51-M55 PolarHBondContact O-N 3.13Å
52E93.3Very high83.6Confident99 Ų99101 Ų10146%0.46355%0.551SS.*Hα-helixtrans-67.3-37.6178-75.6166.8123.300111.5E48 S49 V50 M55E48-E52 HydrophobicContact CG-CB 3.25Å; E48-E52 HydrophobicContact CG-CG 4.2Å; S49-E52 WeakPolarHBondContact CB-OE2 3.48Å; S49-E52 PolarHBondContact N-OE2 3.12Å; S49-E52 PolarHBondContact O-N 3.47Å; S49-E52 VanDerWaalsContact O-N 3.11Å; S49-E52 WeakPolarHBondContact OG-CB 3.48Å; S49-E52 VanDerWaalsContact OG-CG 3.24Å; S49-E52 WeakPolarHBondContact OG-CG 3.24Å; S49-E52 PolarHBondContact OG-N 3.45Å; S49-E52 PolarHBondContact OG-OE2 3.36Å; V50-E52 PolarHBondContact O-N 3.05Å; E52-M55 PolarHBondContact O-N 3.38Å
53Q90.2Very high84.9Confident80 Ų80100.4 Ų100.437%0.37454%0.543SS..Hα-helixtrans-64.5-42.3177.1-168.8-172.744.200111.9E38 E48 S49 V50 K51 M55 K56E38-Q53 PolarHBondContact OE2-NE2 2.97Å; E38-Q53 PolarHBondContact OE2-OE1 3.09Å; E48-Q53 VanDerWaalsContact OE1-CA 3.3Å; E48-Q53 WeakPolarHBondContact OE1-CA 3.33Å; E48-Q53 PolarHBondContact OE1-N 3.26Å; S49-Q53 PolarHBondContact O-N 3.45Å; S49-Q53 VanDerWaalsContact O-N 3.11Å; V50-Q53 WeakPolarHBondContact O-CB 3.49Å; V50-Q53 PolarHBondContact O-N 3.49Å; K51-Q53 VanDerWaalsContact C-N 3.34Å; Q53-M55 PolarHBondContact O-N 3.04Å; Q53-K56 WeakPolarHBondContact O-CB 3.41Å; Q53-K56 PolarHBondContact O-N 3.06Å; Q53-K56 VanDerWaalsContact O-N 3.11Å
54E91.4Very high86.3Confident153 Ų15395.9 Ų95.972%0.71552%0.524SS*.Hα-helixtrans-63.1-27176.6-71.4178.8160.800113.2V50 K56V50-E54 WeakPolarHBondContact O-CG 3.41Å; V50-E54 PolarHBondContact O-N 3.39Å; E54-K56 VanDerWaalsContact C-N 3.29Å
55M94.6Very high87.6Confident141 Ų14197.8 Ų97.870%0.69552%0.516SS*.THydrogen-bonded Turntrans-80.2-8.4177.5-68.8-178.3-173.600113.4K51 E52 Q53K51-M55 HydrophobicContact CD-CE 4.39Å; K51-M55 HydrophobicContact CG-CE 3.76Å; K51-M55 WeakPolarHBondContact O-CG 3.45Å; K51-M55 PolarHBondContact O-N 3.13Å; E52-M55 PolarHBondContact O-N 3.38Å; Q53-M55 PolarHBondContact O-N 3.04Å
56K93Very high88Confident108 Ų108102.6 Ų102.647%0.4752%0.523SS..SBendtrans-80133.8177.3-71.4176.8172.91680111.1E48 Q53 E54 T58E48-K56 VanDerWaalsContact CD-CE 3.43Å; E48-K56 WeakPolarHBondContact OE1-CE 3.22Å; E48-K56 IonicContact OE1-NZ 2.98Å; E48-K56 PolarHBondContact OE1-NZ 3.37Å; E48-K56 WeakPolarHBondContact OE2-CE 3.4Å; E48-K56 IonicContact OE2-NZ 2.63Å; E48-K56 PolarHBondContact OE2-NZ 3.17Å; Q53-K56 WeakPolarHBondContact O-CB 3.41Å; Q53-K56 PolarHBondContact O-N 3.06Å; Q53-K56 VanDerWaalsContact O-N 3.11Å; E54-K56 VanDerWaalsContact C-N 3.29Å; K56-T58 HydrophobicContact CB-CG2 4.25Å; K56-T58 PolarHBondContact O-N 3.45Å
57W94.4Very high87.8Confident230 Ų230108.5 Ų108.587%0.87155%0.545SS*.  trans-87.2103.6168.2-165.429.5000109.5
58T90.4Very high86.9Confident126 Ų126108.5 Ų108.577%0.77354%0.54SS*.  trans-96.5-8.6-176.555.20000113.5K56 L60K56-T58 HydrophobicContact CB-CG2 4.25Å; K56-T58 PolarHBondContact O-N 3.45Å; T58-L60 PolarHBondContact O-N 2.67Å
59D93.4Very high85.7Confident94 Ų94110.8 Ų110.850%0.50356%0.557SS.*  trans-81.2118.2178.6-178.238.7000111.4A61D59-A61 PolarHBondContact OD1-N 2.99Å
60L91.1Very high84.2Confident129 Ų129116 Ų11668%0.67559%0.591SS**  trans-1104.7178.9-170.955.1000112.4T58 L62T58-L60 PolarHBondContact O-N 2.67Å; L60-L62 HydrophobicContact CB-CD1 4.44Å; L60-L62 HydrophobicContact CB-CG 3.97Å; L60-L62 HydrophobicContact CD2-CD1 3.88Å; L60-L62 HydrophobicContact CD2-CD2 3.94Å; L60-L62 HydrophobicContact CD2-CG 3.91Å; L60-L62 HydrophobicContact CG-CD1 4.29Å; L60-L62 HydrophobicContact CG-CD2 3.85Å; L60-L62 HydrophobicContact CG-CG 3.78Å; L60-L62 PolarHBondContact O-N 2.98Å
61A89.7Confident82.8Confident48 Ų48119.5 Ų119.540%0.39762%0.617SS.*  trans52.822.9-179.300000115.2D59 Q63 S64D59-A61 PolarHBondContact OD1-N 2.99Å; A61-Q63 PolarHBondContact O-N 2.95Å; A61-Q63 VanDerWaalsContact O-N 3.11Å; A61-S64 WeakPolarHBondContact O-CB 3.36Å; A61-S64 PolarHBondContact O-N 3Å; A61-S64 VanDerWaalsContact O-N 3.13Å; A61-S64 PolarHBondContact O-OG 3.18Å
62L87.8Confident81.2Confident102 Ų102121.8 Ų121.853%0.53464%0.643SS.*THydrogen-bonded Turntrans-62.7-21.1-176.5-66.3-179.9000113.5L60 S64 L65L60-L62 HydrophobicContact CB-CD1 4.44Å; L60-L62 HydrophobicContact CB-CG 3.97Å; L60-L62 HydrophobicContact CD2-CD1 3.88Å; L60-L62 HydrophobicContact CD2-CD2 3.94Å; L60-L62 HydrophobicContact CD2-CG 3.91Å; L60-L62 HydrophobicContact CG-CD1 4.29Å; L60-L62 HydrophobicContact CG-CD2 3.85Å; L60-L62 HydrophobicContact CG-CG 3.78Å; L60-L62 PolarHBondContact O-N 2.98Å; L62-S64 PolarHBondContact O-N 3.35Å; L62-L65 HydrophobicContact CD2-CD1 3.78Å; L62-L65 WeakPolarHBondContact O-CB 3.29Å; L62-L65 PolarHBondContact O-N 3.17Å
63Q86.8Confident79.8Confident155 Ų155119.5 Ų119.572%0.72465%0.646SS**Hα-helixtrans-53.9-32.6173.862-173.955.400113A61 L65 H66A61-Q63 PolarHBondContact O-N 2.95Å; A61-Q63 VanDerWaalsContact O-N 3.11Å; Q63-L65 PolarHBondContact O-N 3.36Å; Q63-H66 PolarHBondContact O-N 3.29Å
64S85.4Confident77.4Confident66 Ų66125.4 Ų125.446%0.46270%0.696SS.*Hα-helixtrans-65.3-24.3179.362.80000113.5A61 L62 H66A61-S64 WeakPolarHBondContact O-CB 3.36Å; A61-S64 PolarHBondContact O-N 3Å; A61-S64 VanDerWaalsContact O-N 3.13Å; A61-S64 PolarHBondContact O-OG 3.18Å; L62-S64 PolarHBondContact O-N 3.35Å; S64-H66 VanDerWaalsContact C-N 3.35Å
65L84.8Confident76.7Confident114 Ų114124 Ų12460%0.59770%0.695SS**Hα-helixtrans-73.8-28.3178.7-63.9170.2000112L62 Q63L62-L65 HydrophobicContact CD2-CD1 3.78Å; L62-L65 WeakPolarHBondContact O-CB 3.29Å; L62-L65 PolarHBondContact O-N 3.17Å; Q63-L65 PolarHBondContact O-N 3.36Å
66H70.1Confident75.8Confident159 Ų159123.1 Ų123.174%0.73670%0.695SS**Hα-helixtrans-79-29.8-175-147.1-173.4000112.3Q63 S64 N68 T69Q63-H66 PolarHBondContact O-N 3.29Å; S64-H66 VanDerWaalsContact C-N 3.35Å; H66-N68 VanDerWaalsContact C-N 3.28Å; H66-N68 PolarHBondContact O-N 2.92Å; H66-T69 PolarHBondContact O-OG1 3.25Å; H66-T69 VanDerWaalsContact O-OG1 3.11Å
67E64Low74.8Confident169 Ų169123.9 Ų123.979%0.7971%0.708SS**Hα-helixtrans-73.3-20.8175.1-65.7177.2129.900112.8
68N60.4Low73.7Confident139 Ų139117.7 Ų117.774%0.74370%0.698SS**THydrogen-bonded Turntrans-982-174.6-148.224.5000113.6H66 P70H66-N68 VanDerWaalsContact C-N 3.28Å; H66-N68 PolarHBondContact O-N 2.92Å; N68-P70 WeakPolarHBondContact O-CD 3.43Å
69T61.8Low72.7Confident89 Ų89117.2 Ų117.255%0.54669%0.693SS.*SBendtrans-78.6110.4166.954.40000108.5H66 S71H66-T69 PolarHBondContact O-OG1 3.25Å; H66-T69 VanDerWaalsContact O-OG1 3.11Å; T69-S71 PolarHBondContact O-N 3.34Å; T69-S71 VanDerWaalsContact O-N 3.16Å
70P62Low71.3Confident113 Ų113118.7 Ų118.773%0.73471%0.706SS**  trans-58.4127.7172.224.4-31.8000107.8N68 S72N68-P70 WeakPolarHBondContact O-CD 3.43Å; P70-S72 PolarHBondContact O-N 3.1Å
71S59.6Low69.9Low115 Ų115118 Ų11880%0.80471%0.708SS**  trans-56.487.3163.9176.30000107.7T69 G73T69-S71 PolarHBondContact O-N 3.34Å; T69-S71 VanDerWaalsContact O-N 3.16Å; S71-G73 PolarHBondContact O-N 3.24Å
72S60.7Low68.3Low128 Ų128123.4 Ų123.490%0.89573%0.732SS**  trans-79.981.2173.4-146.60000105.6P70P70-S72 PolarHBondContact O-N 3.1Å
73G63.7Low66.7Low51 Ų51125.2 Ų125.253%0.52675%0.749SS.*  trans-169.673.7-172.200000112.9S71S71-G73 PolarHBondContact O-N 3.24Å
74S41.2Very low64.9Low204 Ų204122.5 Ų122.5100%1.42775%0.751SS**  trans177.60134.8-73.40000110.2

Retrieved 74 of 74 residues in 319.2 ms (Link to these results)