A0A087Y618_POEFO Loading...

Ubiquinol-cytochrome c reductase complex assembly factor 5

AlphaFold DB (A0A3B3W2N7), UniProt , Accession A0A087Y618, Species POEFO (Poecilia formosa, Amazon molly), Gene n/a, Length 81 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M42.2Very low59.3Low212 Ų212140.3 Ų140.3100%1.04469%0.687SS**  089.50-172.2170.8169.700108.3H3M1-H3 PolarHBondContact O-N 2.69Å
2F51.8Low59.5Low199 Ų199136.6 Ų136.687%0.87367%0.671SS**  trans-70.3112.3-179.4-78.7-84.4000108.9R4F2-R4 PolarHBondContact O-N 3.38Å
3H53.8Low59.9Low169 Ų169132.7 Ų132.778%0.78267%0.666SS**  trans-64.785.1171.1-73.486.8000108.4M1 S5M1-H3 PolarHBondContact O-N 2.69Å; H3-S5 PolarHBondContact O-N 3.28Å
4R59.1Low60.4Low193 Ų193132.9 Ų132.973%0.72867%0.668SS**  trans-68.697.3175.7-78.6-158.7-171.7-172.29.4108F2 K6F2-R4 PolarHBondContact O-N 3.38Å; R4-K6 PolarHBondContact O-N 3.3Å; R4-K6 VanDerWaalsContact O-N 3.09Å
5S59.8Low60.2Low63 Ų63128.5 Ų128.544%0.44165%0.651SS.*  trans-55.8114.7177.5-161.40000110H3 T7 I8 K9H3-S5 PolarHBondContact O-N 3.28Å; S5-T7 PolarHBondContact O-N 3.43Å; S5-I8 PolarHBondContact O-N 2.94Å; S5-I8 VanDerWaalsContact O-N 3.1Å; S5-K9 PolarHBondContact O-N 3.14Å
6K62.7Low59.8Low187 Ų187128 Ų12881%0.81366%0.659SS**Hα-helixtrans-59-30.6-174.6-65.7-178.1-178179.70111.6R4 I8 K9 G10R4-K6 PolarHBondContact O-N 3.3Å; R4-K6 VanDerWaalsContact O-N 3.09Å; K6-I8 PolarHBondContact O-N 3.03Å; K6-K9 WeakPolarHBondContact O-CB 3.47Å; K6-K9 PolarHBondContact O-N 3.39Å; K6-G10 PolarHBondContact O-N 3.47Å
7T64.8Low59.5Low114 Ų114122 Ų12270%0.69964%0.636SS**Hα-helixtrans-60.1-43.7176.5-38.70000112S5 K9 G10 L11S5-T7 PolarHBondContact O-N 3.43Å; T7-K9 VanDerWaalsContact C-N 3.31Å; T7-K9 PolarHBondContact O-N 3.3Å; T7-G10 PolarHBondContact O-N 3.05Å; T7-L11 PolarHBondContact O-N 2.93Å
8I62.6Low59.4Low110 Ų110124.3 Ų124.356%0.56464%0.64SS**Hα-helixtrans-66.8-38.3178.2-52.8177.9000109.7S5 K6 L12S5-I8 PolarHBondContact O-N 2.94Å; S5-I8 VanDerWaalsContact O-N 3.1Å; K6-I8 PolarHBondContact O-N 3.03Å; I8-L12 WeakPolarHBondContact O-CB 3.19Å; I8-L12 PolarHBondContact O-N 3.48Å
9K63.6Low59.2Low132 Ų132128.3 Ų128.357%0.57466%0.656SS**Hα-helixtrans-65.4-37.5176.4-123.9-174.4-179.2-167.20112.5S5 K6 T7 L12 S13S5-K9 PolarHBondContact O-N 3.14Å; K6-K9 WeakPolarHBondContact O-CB 3.47Å; K6-K9 PolarHBondContact O-N 3.39Å; T7-K9 VanDerWaalsContact C-N 3.31Å; T7-K9 PolarHBondContact O-N 3.3Å; K9-L12 CarbonylContact O-C 3.47Å; K9-L12 PolarHBondContact O-N 3.29Å; K9-S13 WeakPolarHBondContact O-CB 3.45Å; K9-S13 PolarHBondContact O-N 2.94Å
10G66.7Low59.1Low35 Ų35134.1 Ų134.136%0.36167%0.669SS.*Hα-helixtrans-66.2-47.8176.200000112K6 T7 L12 S13 I14K6-G10 PolarHBondContact O-N 3.47Å; T7-G10 PolarHBondContact O-N 3.05Å; G10-L12 VanDerWaalsContact C-N 3.3Å; G10-L12 PolarHBondContact O-N 3.46Å; G10-S13 WeakPolarHBondContact CA-OG 3.49Å; G10-S13 PolarHBondContact O-N 3.19Å; G10-S13 PolarHBondContact O-OG 3.4Å; G10-I14 PolarHBondContact O-N 3.09Å
11L65.5Low59.1Low129 Ų129131.9 Ų131.968%0.67566%0.659SS**Hα-helixtrans-61.9-39174.4-152.175.1000111.5T7 S13 I14T7-L11 PolarHBondContact O-N 2.93Å; L11-S13 PolarHBondContact O-N 3.1Å; L11-I14 WeakPolarHBondContact O-CG2 3.39Å; L11-I14 PolarHBondContact O-N 2.94Å
12L61.8Low60.3Low96 Ų96124.5 Ų124.550%0.50364%0.637SS.*THydrogen-bonded Turntrans-73.5-3.2172-116.371.8000114.6I8 K9 G10 R25I8-L12 WeakPolarHBondContact O-CB 3.19Å; I8-L12 PolarHBondContact O-N 3.48Å; K9-L12 CarbonylContact O-C 3.47Å; K9-L12 PolarHBondContact O-N 3.29Å; G10-L12 VanDerWaalsContact C-N 3.3Å; G10-L12 PolarHBondContact O-N 3.46Å; L12-R25 VanDerWaalsContact O-CZ 3.32Å; L12-R25 PolarHBondContact O-NH1 3.2Å; L12-R25 VanDerWaalsContact O-NH1 3.14Å; L12-R25 PolarHBondContact O-NH2 3.05Å
13S64.1Low60.8Low86 Ų86119.5 Ų119.560%0.60163%0.633SS**THydrogen-bonded Turntrans-100.5-16.3173.865.10000113.2K9 G10 L11 V15K9-S13 WeakPolarHBondContact O-CB 3.45Å; K9-S13 PolarHBondContact O-N 2.94Å; G10-S13 WeakPolarHBondContact CA-OG 3.49Å; G10-S13 PolarHBondContact O-N 3.19Å; G10-S13 PolarHBondContact O-OG 3.4Å; L11-S13 PolarHBondContact O-N 3.1Å; S13-V15 PolarHBondContact O-N 2.77Å
14I67.1Low61.5Low136 Ų136119.1 Ų119.170%0.69763%0.626SS**SBendtrans-73.2-12.7-178.3-135.5158.2000113.2G10 L11 P16G10-I14 PolarHBondContact O-N 3.09Å; L11-I14 WeakPolarHBondContact O-CG2 3.39Å; L11-I14 PolarHBondContact O-N 2.94Å; I14-P16 WeakPolarHBondContact O-CD 3.34Å
15V58.3Low62Low67 Ų67111.9 Ų111.941%0.40660%0.598SS.*SBendtrans-91105.2177.3-153.60000108.7S13 G17 R25S13-V15 PolarHBondContact O-N 2.77Å; V15-G17 PolarHBondContact O-N 2.86Å; V15-R25 VanDerWaalsContact CG2-NH2 3.25Å
16P52.8Low62.5Low120 Ų120115 Ų11578%0.77960%0.604SS**THydrogen-bonded Turntrans-68126.5174.329.9-32.8000108I14I14-P16 WeakPolarHBondContact O-CD 3.34Å
17G55.4Low63.3Low26 Ų26111 Ų11127%0.26859%0.591SS.*THydrogen-bonded Turntrans142.1-3.6-175.700000115.4V15 Q19 R20 L21V15-G17 PolarHBondContact O-N 2.86Å; G17-Q19 PolarHBondContact O-N 3.21Å; G17-R20 PolarHBondContact O-N 2.64Å; G17-L21 WeakPolarHBondContact O-CB 3.5Å; G17-L21 PolarHBondContact O-N 2.98Å
18K56.8Low64Low164 Ų164108.7 Ų108.771%0.71358%0.578SS**THydrogen-bonded Turntrans-55.1-20.4176.4-158.7166.5-178.4-80.90114
19Q55.3Low64.9Low200 Ų200107.5 Ų107.594%0.93557%0.572SS**THydrogen-bonded Turntrans-101.6-23.5-177.6-145.5174.639.400114.5G17G17-Q19 PolarHBondContact O-N 3.21Å
20R57.6Low66Low243 Ų243108 Ų10892%0.91757%0.574SS**THydrogen-bonded Turntrans-112.6-26.2178.3-74.1-157.9-165175.55.8114.9G17G17-R20 PolarHBondContact O-N 2.64Å
21L59.3Low66.9Low88 Ų88114.5 Ų114.546%0.46159%0.593SS.*  trans-104.15.7-172.9-65.8173.7000113.9G17 A23 Y24 R25G17-L21 WeakPolarHBondContact O-CB 3.5Å; G17-L21 PolarHBondContact O-N 2.98Å; L21-A23 PolarHBondContact O-N 3.19Å; L21-A23 VanDerWaalsContact O-N 3.16Å; L21-Y24 CarbonylContact O-C 3.35Å; L21-Y24 WeakPolarHBondContact O-CA 3.18Å; L21-Y24 PolarHBondContact O-N 3.25Å; L21-R25 PolarHBondContact O-N 2.99Å
22G66.8Low68.1Low57 Ų57112.2 Ų112.259%0.58859%0.587SS**G310 helixtrans20.6-104.8167.500000116.2
23A64Low69.5Low95 Ų95112 Ų11279%0.78559%0.585SS**G310 helixtrans-75.9-21.9179.600000114.7L21 R25L21-A23 PolarHBondContact O-N 3.19Å; L21-A23 VanDerWaalsContact O-N 3.16Å; A23-R25 VanDerWaalsContact C-N 3.31Å; A23-R25 PolarHBondContact O-N 2.94Å
24Y66.9Low70.7Confident161 Ų161109.5 Ų109.563%0.63157%0.573SS**G310 helixtrans-89.310.9-178.7-88.2-83.7000114.1L21 F26 L27L21-Y24 CarbonylContact O-C 3.35Å; L21-Y24 WeakPolarHBondContact O-CA 3.18Å; L21-Y24 PolarHBondContact O-N 3.25Å; Y24-F26 PolarHBondContact O-N 3.31Å; Y24-L27 HydrophobicContact CD1-CB 3.96Å; Y24-L27 HydrophobicContact CD1-CD1 4.09Å; Y24-L27 HydrophobicContact CD1-CD2 3.81Å; Y24-L27 HydrophobicContact CD1-CG 4.16Å; Y24-L27 HydrophobicContact CE1-CD1 4.24Å; Y24-L27 HydrophobicContact CE1-CD2 4.35Å; Y24-L27 WeakPolarHBondContact O-CB 3.46Å; Y24-L27 PolarHBondContact O-N 3.01Å
25R69.9Low71.9Confident40 Ų40104.8 Ų104.815%0.15156%0.558CS.*G310 helixtrans-56.7-25.3179.4-173.7174.7176.11628.1113.9L12 V15 L21 A23L12-R25 VanDerWaalsContact O-CZ 3.32Å; L12-R25 PolarHBondContact O-NH1 3.2Å; L12-R25 VanDerWaalsContact O-NH1 3.14Å; L12-R25 PolarHBondContact O-NH2 3.05Å; V15-R25 VanDerWaalsContact CG2-NH2 3.25Å; L21-R25 PolarHBondContact O-N 2.99Å; A23-R25 VanDerWaalsContact C-N 3.31Å; A23-R25 PolarHBondContact O-N 2.94Å
26F70.7Confident73.4Confident129 Ų129105.1 Ų105.157%0.56656%0.561SS**G310 helixtrans-86.2-15.1178.4-58.5-78000113.5Y24 I29 F30Y24-F26 PolarHBondContact O-N 3.31Å; F26-I29 HydrophobicContact CD1-CD1 4.24Å; F26-I29 CarbonylContact O-C 3.6Å; F26-I29 WeakPolarHBondContact O-CA 3.36Å; F26-I29 WeakPolarHBondContact O-CB 3.45Å; F26-I29 PolarHBondContact O-N 2.79Å; F26-F30 HydrophobicContact CB-CD2 3.73Å; F26-F30 HydrophobicContact CB-CE2 3.56Å; F26-F30 HydrophobicContact CG-CE2 4.47Å; F26-F30 WeakPolarHBondContact O-CD2 3.35Å; F26-F30 PolarHBondContact O-N 2.82Å
27L80.1Confident75Confident102 Ų102104.9 Ų104.953%0.53455%0.55SS.*Hα-helixtrans-55.3-49.7-178.3-168.971.9000113.9Y24 I29 F30 F31Y24-L27 HydrophobicContact CD1-CB 3.96Å; Y24-L27 HydrophobicContact CD1-CD1 4.09Å; Y24-L27 HydrophobicContact CD1-CD2 3.81Å; Y24-L27 HydrophobicContact CD1-CG 4.16Å; Y24-L27 HydrophobicContact CE1-CD1 4.24Å; Y24-L27 HydrophobicContact CE1-CD2 4.35Å; Y24-L27 WeakPolarHBondContact O-CB 3.46Å; Y24-L27 PolarHBondContact O-N 3.01Å; L27-I29 PolarHBondContact O-N 3.16Å; L27-F30 PolarHBondContact O-N 3.05Å; L27-F31 PolarHBondContact O-N 2.75Å
28P79Confident76.3Confident66 Ų66110 Ų11043%0.42957%0.567SS.*Hα-helixtrans-64.6-29.6176.524.9-34.4000112.3C32P28-C32 WeakPolarHBondContact O-CB 3.11Å; P28-C32 PolarHBondContact O-N 3.47Å; P28-C32 PolarHBondContact O-SG 3.45Å
29I82.1Confident77.7Confident86 Ų86109.6 Ų109.644%0.44156%0.561SS.*Hα-helixtrans-70.4-45.8177.8-56173.1000110F26 L27 F31 C32 I33F26-I29 HydrophobicContact CD1-CD1 4.24Å; F26-I29 CarbonylContact O-C 3.6Å; F26-I29 WeakPolarHBondContact O-CA 3.36Å; F26-I29 WeakPolarHBondContact O-CB 3.45Å; F26-I29 PolarHBondContact O-N 2.79Å; L27-I29 PolarHBondContact O-N 3.16Å; I29-F31 VanDerWaalsContact C-N 3.3Å; I29-F31 PolarHBondContact O-N 3.41Å; I29-C32 PolarHBondContact O-N 2.82Å; I29-I33 HydrophobicContact CG2-CD1 3.76Å; I29-I33 HydrophobicContact CG2-CG1 4.4Å; I29-I33 WeakPolarHBondContact O-CB 3.14Å; I29-I33 VanDerWaalsContact O-CG1 3.25Å; I29-I33 WeakPolarHBondContact O-CG1 3.24Å; I29-I33 PolarHBondContact O-N 3.45Å
30F85.3Confident79Confident142 Ų142103.1 Ų103.162%0.62353%0.532SS*.Hα-helixtrans-62.4-37.3175.4-79.5-71.6000112.1F26 L27 I33 G34F26-F30 HydrophobicContact CB-CD2 3.73Å; F26-F30 HydrophobicContact CB-CE2 3.56Å; F26-F30 HydrophobicContact CG-CE2 4.47Å; F26-F30 WeakPolarHBondContact O-CD2 3.35Å; F26-F30 PolarHBondContact O-N 2.82Å; L27-F30 PolarHBondContact O-N 3.05Å; F30-I33 PolarHBondContact O-N 2.86Å; F30-G34 PolarHBondContact O-N 2.84Å
31F87.1Confident79.9Confident171 Ų17198.1 Ų98.175%0.7552%0.521SS*.Hα-helixtrans-66-46.1175.4-169.2-97.3000111.9L27 I29 G34 G35L27-F31 PolarHBondContact O-N 2.75Å; I29-F31 VanDerWaalsContact C-N 3.3Å; I29-F31 PolarHBondContact O-N 3.41Å; F31-G34 PolarHBondContact O-N 2.83Å; F31-G35 PolarHBondContact O-N 2.87Å
32C89.9Confident80.4Confident82 Ų82100.2 Ų100.255%0.55453%0.532SS*.Hα-helixtrans-62.4-43174.9-69.80000112P28 I29 G35 V36P28-C32 WeakPolarHBondContact O-CB 3.11Å; P28-C32 PolarHBondContact O-N 3.47Å; P28-C32 PolarHBondContact O-SG 3.45Å; I29-C32 PolarHBondContact O-N 2.82Å; C32-G35 PolarHBondContact O-N 3.49Å; C32-V36 VanDerWaalsContact O-CB 3.3Å; C32-V36 WeakPolarHBondContact O-CB 3.3Å; C32-V36 WeakPolarHBondContact O-CG2 3.38Å; C32-V36 PolarHBondContact O-N 3.44Å
33I90.9Very high80.6Confident90 Ų90101.2 Ų101.246%0.46252%0.523SS..Hα-helixtrans-64.3-42176.8-68.6168.3000110.8I29 F30 V36 M37I29-I33 HydrophobicContact CG2-CD1 3.76Å; I29-I33 HydrophobicContact CG2-CG1 4.4Å; I29-I33 WeakPolarHBondContact O-CB 3.14Å; I29-I33 VanDerWaalsContact O-CG1 3.25Å; I29-I33 WeakPolarHBondContact O-CG1 3.24Å; I29-I33 PolarHBondContact O-N 3.45Å; F30-I33 PolarHBondContact O-N 2.86Å; I33-V36 PolarHBondContact O-N 2.97Å; I33-M37 WeakPolarHBondContact O-CB 3.12Å; I33-M37 WeakPolarHBondContact O-CG 3.17Å; I33-M37 PolarHBondContact O-N 3.34Å
34G90.3Very high80.4Confident34 Ų34101.1 Ų101.135%0.35151%0.513SS..Hα-helixtrans-61.5-48.6175.500000112.1F30 F31 V36 M37 E38F30-G34 PolarHBondContact O-N 2.84Å; F31-G34 PolarHBondContact O-N 2.83Å; G34-V36 VanDerWaalsContact C-N 3.35Å; G34-V36 PolarHBondContact O-N 3.32Å; G34-M37 WeakPolarHBondContact O-CB 3.25Å; G34-M37 PolarHBondContact O-N 3.47Å; G34-M37 VanDerWaalsContact O-N 3.16Å; G34-E38 PolarHBondContact O-N 3.14Å
35G91.8Very high79.8Confident37 Ų37101.7 Ų101.738%0.38151%0.514SS..Hα-helixtrans-64.5-36.8176.500000113.1F31 C32 W39F31-G35 PolarHBondContact O-N 2.87Å; C32-G35 PolarHBondContact O-N 3.49Å; G35-W39 WeakPolarHBondContact O-CB 3.18Å; G35-W39 PolarHBondContact O-N 3.33Å
36V90.2Very high79Confident75 Ų75106.7 Ų106.746%0.45554%0.542SS..Hα-helixtrans-66.9-39.4172.5168.50000110.8C32 I33 G34 W39 I40C32-V36 VanDerWaalsContact O-CB 3.3Å; C32-V36 WeakPolarHBondContact O-CB 3.3Å; C32-V36 WeakPolarHBondContact O-CG2 3.38Å; C32-V36 PolarHBondContact O-N 3.44Å; I33-V36 PolarHBondContact O-N 2.97Å; G34-V36 VanDerWaalsContact C-N 3.35Å; G34-V36 PolarHBondContact O-N 3.32Å; V36-W39 PolarHBondContact O-N 3.25Å; V36-I40 HydrophobicContact CG1-CD1 3.61Å; V36-I40 HydrophobicContact CG1-CG1 4.16Å; V36-I40 VanDerWaalsContact O-CB 3.24Å; V36-I40 WeakPolarHBondContact O-CB 3.42Å; V36-I40 WeakPolarHBondContact O-CG1 3.23Å; V36-I40 PolarHBondContact O-N 2.86Å
37M85Confident78.1Confident115 Ų115102.5 Ų102.557%0.56754%0.535SS*.Hα-helixtrans-62.8-46174.7-81.6-65.1-170.300111.8I33 G34 I40 M41I33-M37 WeakPolarHBondContact O-CB 3.12Å; I33-M37 WeakPolarHBondContact O-CG 3.17Å; I33-M37 PolarHBondContact O-N 3.34Å; G34-M37 WeakPolarHBondContact O-CB 3.25Å; G34-M37 PolarHBondContact O-N 3.47Å; G34-M37 VanDerWaalsContact O-N 3.16Å; M37-I40 PolarHBondContact O-N 3.2Å; M37-M41 VanDerWaalsContact O-CG 3.3Å; M37-M41 WeakPolarHBondContact O-CG 3.46Å; M37-M41 PolarHBondContact O-N 2.97Å
38E83.8Confident76.6Confident134 Ų134104.3 Ų104.363%0.62654%0.541SS*.Hα-helixtrans-65.4-41.2174.8-68.1-154.910300112.1G34 I40 M41 I42G34-E38 PolarHBondContact O-N 3.14Å; E38-I40 VanDerWaalsContact C-N 3.34Å; E38-I40 PolarHBondContact O-N 2.73Å; E38-M41 WeakPolarHBondContact O-CB 3.15Å; E38-M41 PolarHBondContact O-N 3.32Å; E38-M41 VanDerWaalsContact O-N 3.12Å; E38-I42 WeakPolarHBondContact O-CG1 3.37Å; E38-I42 PolarHBondContact O-N 3.4Å
39W86.1Confident75.4Confident154 Ų154107.7 Ų107.758%0.58355%0.551SS**Hα-helixtrans-64-38.8175.8-179.376.6000111.9G35 V36 I42 N43G35-W39 WeakPolarHBondContact O-CB 3.18Å; G35-W39 PolarHBondContact O-N 3.33Å; V36-W39 PolarHBondContact O-N 3.25Å; W39-I42 PolarHBondContact O-N 3.47Å; W39-N43 HydrophobicContact CD2-CB 4.28Å; W39-N43 HydrophobicContact CZ2-CB 4.2Å; W39-N43 WeakPolarHBondContact O-CB 3.27Å; W39-N43 PolarHBondContact O-N 3.5Å
40I81.2Confident74.1Confident64 Ų64107.4 Ų107.433%0.32855%0.553SS.*Hα-helixtrans-62.8-44.9170.4-74.8169.4000109.1V36 M37 E38 I42 N43 V44V36-I40 HydrophobicContact CG1-CD1 3.61Å; V36-I40 HydrophobicContact CG1-CG1 4.16Å; V36-I40 VanDerWaalsContact O-CB 3.24Å; V36-I40 WeakPolarHBondContact O-CB 3.42Å; V36-I40 WeakPolarHBondContact O-CG1 3.23Å; V36-I40 PolarHBondContact O-N 2.86Å; M37-I40 PolarHBondContact O-N 3.2Å; E38-I40 VanDerWaalsContact C-N 3.34Å; E38-I40 PolarHBondContact O-N 2.73Å; I40-I42 PolarHBondContact O-N 3.12Å; I40-N43 PolarHBondContact O-N 2.82Å; I40-V44 HydrophobicContact CG2-CB 3.69Å; I40-V44 HydrophobicContact CG2-CG1 3.61Å; I40-V44 HydrophobicContact CG2-CG2 4.21Å; I40-V44 WeakPolarHBondContact O-CA 3.16Å; I40-V44 WeakPolarHBondContact O-CB 3.12Å; I40-V44 WeakPolarHBondContact O-CG1 2.94Å; I40-V44 PolarHBondContact O-N 3.37Å
41M77.1Confident72.5Confident139 Ų139106 Ų10669%0.68555%0.547SS*.Hα-helixtrans-58.8-33.5175.9-70.7172.365.500112.9M37 E38M37-M41 VanDerWaalsContact O-CG 3.3Å; M37-M41 WeakPolarHBondContact O-CG 3.46Å; M37-M41 PolarHBondContact O-N 2.97Å; E38-M41 WeakPolarHBondContact O-CB 3.15Å; E38-M41 PolarHBondContact O-N 3.32Å; E38-M41 VanDerWaalsContact O-N 3.12Å
42I70.6Confident70.8Confident132 Ų132107.5 Ų107.568%0.67755%0.549SS*.Hα-helixtrans-81.9-40.3177.6-64.2163.3000112.3E38 W39 I40 R45E38-I42 WeakPolarHBondContact O-CG1 3.37Å; E38-I42 PolarHBondContact O-N 3.4Å; W39-I42 PolarHBondContact O-N 3.47Å; I40-I42 PolarHBondContact O-N 3.12Å; I42-R45 VanDerWaalsContact O-CB 3.27Å; I42-R45 WeakPolarHBondContact O-CB 3.45Å
43N69.5Low69.2Low77 Ų77106.9 Ų106.941%0.41254%0.54SS..Hα-helixtrans-91.5-42.5-173.7-167.5-89.2000112.5W39 I40 R45 I46W39-N43 HydrophobicContact CD2-CB 4.28Å; W39-N43 HydrophobicContact CZ2-CB 4.2Å; W39-N43 WeakPolarHBondContact O-CB 3.27Å; W39-N43 PolarHBondContact O-N 3.5Å; I40-N43 PolarHBondContact O-N 2.82Å; N43-R45 PolarHBondContact O-N 2.67Å; N43-R45 VanDerWaalsContact O-N 3.14Å; N43-I46 WeakPolarHBondContact O-CB 3.42Å; N43-I46 WeakPolarHBondContact O-CD1 3.28Å; N43-I46 VanDerWaalsContact O-CG1 3.23Å; N43-I46 WeakPolarHBondContact O-CG1 3.46Å; N43-I46 PolarHBondContact O-N 2.86Å
44V61.2Low67.6Low93 Ų93106.6 Ų106.656%0.56454%0.543SS*.SBendtrans-69.92.1168.9114.40000112.7I40 I46 G47I40-V44 HydrophobicContact CG2-CB 3.69Å; I40-V44 HydrophobicContact CG2-CG1 3.61Å; I40-V44 HydrophobicContact CG2-CG2 4.21Å; I40-V44 WeakPolarHBondContact O-CA 3.16Å; I40-V44 WeakPolarHBondContact O-CB 3.12Å; I40-V44 WeakPolarHBondContact O-CG1 2.94Å; I40-V44 PolarHBondContact O-N 3.37Å; V44-I46 PolarHBondContact O-N 3.16Å; V44-G47 PolarHBondContact O-N 2.89Å
45R54.9Low65.8Low174 Ų174113.5 Ų113.566%0.65756%0.559SS**THydrogen-bonded Turntrans-65.829.5156.8-148.3165.8177-172.5-4.4113.4I42 N43 E49I42-R45 VanDerWaalsContact O-CB 3.27Å; I42-R45 WeakPolarHBondContact O-CB 3.45Å; N43-R45 PolarHBondContact O-N 2.67Å; N43-R45 VanDerWaalsContact O-N 3.14Å; R45-E49 VanDerWaalsContact CG-OE2 3.28Å; R45-E49 WeakPolarHBondContact CG-OE2 3.3Å; R45-E49 IonicContact CZ-OE2 3.78Å; R45-E49 IonicContact NE-OE2 2.89Å; R45-E49 PolarHBondContact NE-OE2 2.94Å; R45-E49 IonicContact NH2-OE2 3.78Å
46I51.5Low64.1Low145 Ų145120.4 Ų120.474%0.74457%0.574SS**THydrogen-bonded Turntrans-109.80.8178.2-79.3169.1000111.2N43 V44N43-I46 WeakPolarHBondContact O-CB 3.42Å; N43-I46 WeakPolarHBondContact O-CD1 3.28Å; N43-I46 VanDerWaalsContact O-CG1 3.23Å; N43-I46 WeakPolarHBondContact O-CG1 3.46Å; N43-I46 PolarHBondContact O-N 2.86Å; V44-I46 PolarHBondContact O-N 3.16Å
47G52.3Low62.4Low41 Ų41125.3 Ų125.342%0.42358%0.584SS.*THydrogen-bonded Turntrans-164.9-2.2-178.800000122.3V44V44-G47 PolarHBondContact O-N 2.89Å
48H49.5Very low61.1Low140 Ų140127.3 Ų127.365%0.64859%0.589SS**SBendtrans-121.912.8-176.6-131.4-82.6000116F51H48-F51 AromaticContact CD2-CD2 3.54Å; H48-F51 AromaticContact CD2-CE2 3.3Å; H48-F51 WeakPolarHBondContact CD2-CE2 3.44Å; H48-F51 AromaticContact CE1-CD2 3.44Å; H48-F51 VanDerWaalsContact CE1-CD2 3.44Å; H48-F51 WeakPolarHBondContact CE1-CD2 3.3Å; H48-F51 AromaticContact CE1-CE2 3.58Å; H48-F51 AromaticContact CG-CD2 3.82Å; H48-F51 AromaticContact ND1-CD2 3.75Å; H48-F51 AromaticContact NE2-CD2 3.32Å; H48-F51 VanDerWaalsContact NE2-CD2 3.32Å; H48-F51 WeakPolarHBondContact NE2-CD2 3.32Å; H48-F51 AromaticContact NE2-CE2 2.96Å; H48-F51 WeakPolarHBondContact NE2-CE2 3.28Å; H48-F51 AromaticContact NE2-CZ 3.73Å
49E53Low59.7Low137 Ų137128 Ų12864%0.6459%0.59SS**SBendtrans-92.4-7.2154.1-58.2-175.290.400111.1R45R45-E49 VanDerWaalsContact CG-OE2 3.28Å; R45-E49 WeakPolarHBondContact CG-OE2 3.3Å; R45-E49 IonicContact CZ-OE2 3.78Å; R45-E49 IonicContact NE-OE2 2.89Å; R45-E49 PolarHBondContact NE-OE2 2.94Å; R45-E49 IonicContact NH2-OE2 3.78Å
50T55.7Low58.1Low79 Ų79123.6 Ų123.649%0.48558%0.584SS.*  trans-107.115.6-174.8-49.50000113.2Y52 D53T50-Y52 PolarHBondContact O-N 2.98Å; T50-D53 HydrophobicContact CG2-CB 3.35Å; T50-D53 VanDerWaalsContact O-CB 3.28Å; T50-D53 WeakPolarHBondContact O-CB 3.19Å; T50-D53 PolarHBondContact O-N 3.13Å
51F50.5Low57Low114 Ų114126.7 Ų126.750%0.560%0.596SS.*Hα-helixtrans-64-14163.4-101.5-94.1000112.8H48 D53 Y55H48-F51 AromaticContact CD2-CD2 3.54Å; H48-F51 AromaticContact CD2-CE2 3.3Å; H48-F51 WeakPolarHBondContact CD2-CE2 3.44Å; H48-F51 AromaticContact CE1-CD2 3.44Å; H48-F51 VanDerWaalsContact CE1-CD2 3.44Å; H48-F51 WeakPolarHBondContact CE1-CD2 3.3Å; H48-F51 AromaticContact CE1-CE2 3.58Å; H48-F51 AromaticContact CG-CD2 3.82Å; H48-F51 AromaticContact ND1-CD2 3.75Å; H48-F51 AromaticContact NE2-CD2 3.32Å; H48-F51 VanDerWaalsContact NE2-CD2 3.32Å; H48-F51 WeakPolarHBondContact NE2-CD2 3.32Å; H48-F51 AromaticContact NE2-CE2 2.96Å; H48-F51 WeakPolarHBondContact NE2-CE2 3.28Å; H48-F51 AromaticContact NE2-CZ 3.73Å; F51-D53 PolarHBondContact O-N 3.27Å; F51-Y55 WeakPolarHBondContact O-CB 2.96Å; F51-Y55 PolarHBondContact O-N 2.88Å; F51-Y55 VanDerWaalsContact O-N 3.13Å
52Y52.6Low56.1Low202 Ų202129.7 Ų129.779%0.79260%0.6SS**Hα-helixtrans-63-31.4164.5-136.5-87.5000112.2T50 R56T50-Y52 PolarHBondContact O-N 2.98Å; Y52-R56 WeakPolarHBondContact O-CB 3.46Å; Y52-R56 PolarHBondContact O-N 3.44Å
53D55.6Low55.4Low69 Ų69128.7 Ų128.737%0.36959%0.593SS.*Hα-helixtrans-77.1-41.4-179.3-148.4-94.3000111.4T50 F51 Y55 R56 R57T50-D53 HydrophobicContact CG2-CB 3.35Å; T50-D53 VanDerWaalsContact O-CB 3.28Å; T50-D53 WeakPolarHBondContact O-CB 3.19Å; T50-D53 PolarHBondContact O-N 3.13Å; F51-D53 PolarHBondContact O-N 3.27Å; D53-Y55 VanDerWaalsContact C-N 3.33Å; D53-Y55 PolarHBondContact O-N 2.96Å; D53-R56 PolarHBondContact O-N 3.47Å; D53-R57 WeakPolarHBondContact O-CG 3.45Å; D53-R57 PolarHBondContact O-N 3.26Å; D53-R57 IonicContact OD1-NE 3.62Å
54V57.2Low54.7Low84 Ų84132.2 Ų132.251%0.50960%0.601SS.*Hα-helixtrans-65.5-37.3175.8-176.90000111.1
55Y53.6Low54.5Low178 Ų178133.6 Ų133.670%0.69860%0.602SS**Hα-helixtrans-72-36.3175-158-93.7000112.5F51 D53F51-Y55 WeakPolarHBondContact O-CB 2.96Å; F51-Y55 PolarHBondContact O-N 2.88Å; F51-Y55 VanDerWaalsContact O-N 3.13Å; D53-Y55 VanDerWaalsContact C-N 3.33Å; D53-Y55 PolarHBondContact O-N 2.96Å
56R54.4Low54.7Low182 Ų182131 Ų13169%0.68760%0.597SS**Hα-helixtrans-66.5-37.7176.5-174.5177.8172.2-175.5-2.1112.4Y52 D53 K59 S60Y52-R56 WeakPolarHBondContact O-CB 3.46Å; Y52-R56 PolarHBondContact O-N 3.44Å; D53-R56 PolarHBondContact O-N 3.47Å; R56-K59 PolarHBondContact O-N 3.2Å; R56-S60 PolarHBondContact O-N 3.4Å
57R56.2Low55Low179 Ų179131.2 Ų131.268%0.67559%0.592SS**Hα-helixtrans-62.3-44.3178.4-74.4-165-176.8-141.91.8112.9D53 K59 S60D53-R57 WeakPolarHBondContact O-CG 3.45Å; D53-R57 PolarHBondContact O-N 3.26Å; D53-R57 IonicContact OD1-NE 3.62Å; R57-K59 VanDerWaalsContact C-N 3.27Å; R57-K59 PolarHBondContact O-N 3.28Å; R57-S60 PolarHBondContact O-N 3.31Å
58K56.6Low55.3Low156 Ų156134.2 Ų134.268%0.67860%0.598SS**Hα-helixtrans-67.5-21.5178.4-84.2-172.4178.2-175.80114.6
59K55.2Low55.6Low148 Ų148132 Ų13264%0.64359%0.594SS**Hα-helixtrans-80.3-30.6177.7-136.6177-172.6-177.80112.3R56 R57R56-K59 PolarHBondContact O-N 3.2Å; R57-K59 VanDerWaalsContact C-N 3.27Å; R57-K59 PolarHBondContact O-N 3.28Å
60S52.7Low55.8Low63 Ų63130.4 Ų130.444%0.44159%0.59SS.*Hα-helixtrans-71-37.7177.3-163.60000112.3R56 R57 R62 Q63 Y64R56-S60 PolarHBondContact O-N 3.4Å; R57-S60 PolarHBondContact O-N 3.31Å; S60-R62 VanDerWaalsContact C-N 3.31Å; S60-R62 PolarHBondContact O-N 3.28Å; S60-Q63 PolarHBondContact O-N 3.05Å; S60-Y64 WeakPolarHBondContact O-CD2 3.28Å; S60-Y64 PolarHBondContact O-N 3.27Å; S60-Y64 VanDerWaalsContact O-N 3.16Å
61E58Low55.8Low128 Ų128128.7 Ų128.760%0.59859%0.588SS**Hα-helixtrans-63.4-35.8179.5-71.417796.200112.5Q65E61-Q65 WeakPolarHBondContact O-CG 3.46Å; E61-Q65 PolarHBondContact O-N 3.16Å
62R57.4Low56Low202 Ų202127.5 Ų127.576%0.76259%0.591SS**Hα-helixtrans-71.9-31.6178.2-72-178.6174.1166-2.6113.5S60S60-R62 VanDerWaalsContact C-N 3.31Å; S60-R62 PolarHBondContact O-N 3.28Å
63Q56Low56.1Low111 Ų111124 Ų12452%0.51959%0.586SS.*Hα-helixtrans-76.3-31.7177.5-71.1-81.714.500112.5S60 K67S60-Q63 PolarHBondContact O-N 3.05Å; Q63-K67 PolarHBondContact O-N 3.29Å
64Y54.4Low56.1Low151 Ų151126.1 Ų126.159%0.59260%0.601SS**Hα-helixtrans-72.7-38.2175.8-93.5-94.4000112.5S60 Q66 K67 I68S60-Y64 WeakPolarHBondContact O-CD2 3.28Å; S60-Y64 PolarHBondContact O-N 3.27Å; S60-Y64 VanDerWaalsContact O-N 3.16Å; Y64-Q66 VanDerWaalsContact C-N 3.31Å; Y64-Q66 PolarHBondContact O-N 3.33Å; Y64-K67 PolarHBondContact O-N 3.42Å; Y64-I68 VanDerWaalsContact O-CG1 3.28Å; Y64-I68 WeakPolarHBondContact O-CG1 3.34Å; Y64-I68 PolarHBondContact O-N 3.38Å
65Q58.2Low56Low123 Ų123129.4 Ų129.458%0.57562%0.615SS**Hα-helixtrans-66.5-31.9177.7-69.3-66.3-5.600113E61 T69E61-Q65 WeakPolarHBondContact O-CG 3.46Å; E61-Q65 PolarHBondContact O-N 3.16Å; Q65-T69 WeakPolarHBondContact O-CB 3.4Å; Q65-T69 PolarHBondContact O-N 3.14Å; Q65-T69 VanDerWaalsContact O-N 3.1Å; Q65-T69 PolarHBondContact O-OG1 3.08Å
66Q57.8Low56Low119 Ų119127.4 Ų127.456%0.55662%0.616SS**Hα-helixtrans-68.7-46.8173.1-72-176.6-18.100111.5Y64 I68 T69 D70Y64-Q66 VanDerWaalsContact C-N 3.31Å; Y64-Q66 PolarHBondContact O-N 3.33Å; Q66-I68 VanDerWaalsContact C-N 3.29Å; Q66-I68 PolarHBondContact O-N 2.81Å; Q66-T69 PolarHBondContact O-N 3.1Å; Q66-T69 VanDerWaalsContact O-N 3.14Å; Q66-D70 PolarHBondContact O-N 3.34Å; Q66-D70 VanDerWaalsContact O-OD2 3.11Å
67K57.2Low56.1Low149 Ų149127.1 Ų127.165%0.64862%0.623SS**Hα-helixtrans-63.3-30.9178.1-73.7172.7177.1-75.50114Q63 Y64 G71Q63-K67 PolarHBondContact O-N 3.29Å; Y64-K67 PolarHBondContact O-N 3.42Å; K67-G71 PolarHBondContact O-N 2.92Å; K67-G71 VanDerWaalsContact O-N 3.08Å
68I58.6Low55.9Low104 Ų104127.7 Ų127.753%0.53363%0.633SS.*Hα-helixtrans-81.4-26177.1-62.6165.6000111.6Y64 Q66 P72Y64-I68 VanDerWaalsContact O-CG1 3.28Å; Y64-I68 WeakPolarHBondContact O-CG1 3.34Å; Y64-I68 PolarHBondContact O-N 3.38Å; Q66-I68 VanDerWaalsContact C-N 3.29Å; Q66-I68 PolarHBondContact O-N 2.81Å; I68-P72 VanDerWaalsContact O-CD 3.23Å; I68-P72 WeakPolarHBondContact O-CD 3.23Å
69T57Low55.6Low94 Ų94123.6 Ų123.658%0.57763%0.634SS**Hα-helixtrans-81-34.5175.7-59.80000111.9Q65 Q66 P72Q65-T69 WeakPolarHBondContact O-CB 3.4Å; Q65-T69 PolarHBondContact O-N 3.14Å; Q65-T69 VanDerWaalsContact O-N 3.1Å; Q65-T69 PolarHBondContact O-OG1 3.08Å; Q66-T69 PolarHBondContact O-N 3.1Å; Q66-T69 VanDerWaalsContact O-N 3.14Å; T69-P72 VanDerWaalsContact O-CD 3.26Å; T69-P72 WeakPolarHBondContact O-CD 3.26Å
70D57.9Low55Low104 Ų104121 Ų12156%0.55664%0.641SS**Hα-helixtrans-82.9-19.2174.4-76.6-79.4000113.5Q66Q66-D70 PolarHBondContact O-N 3.34Å; Q66-D70 VanDerWaalsContact O-OD2 3.11Å
71G55.7Low54.4Low42 Ų42131.4 Ų131.443%0.43368%0.678SS.*THydrogen-bonded Turntrans-67.4-27.7-178.900000118K67K67-G71 PolarHBondContact O-N 2.92Å; K67-G71 VanDerWaalsContact O-N 3.08Å
72P52.7Low54.2Low89 Ų89131.6 Ų131.658%0.57868%0.682SS**THydrogen-bonded Turntrans-84.6-13.3177.4-7.426.1000112.9I68 T69I68-P72 VanDerWaalsContact O-CD 3.23Å; I68-P72 WeakPolarHBondContact O-CD 3.23Å; T69-P72 VanDerWaalsContact O-CD 3.26Å; T69-P72 WeakPolarHBondContact O-CD 3.26Å
73L56.2Low54Low129 Ų129127.8 Ų127.868%0.67568%0.678SS**SBendtrans-87.6-12-173.3-68.1173.7000114.2
74V54.8Low53.9Low113 Ų113128.8 Ų128.869%0.68569%0.687SS**SBendtrans-96.7-17.2-177.7178.70000113.3
75L56.2Low53.9Low153 Ų153127.5 Ų127.580%0.80169%0.692SS**SBendtrans-88.5-12.3179.4-65.2178.5000114.3
76D52.8Low53.6Low136 Ų136127.8 Ų127.873%0.72770%0.699SS**SBendtrans-86.5-27.2-179.9-160.8-114.1000113H78D76-H78 PolarHBondContact O-N 3.44Å
77Q56.1Low53.3Low176 Ų176128.3 Ų128.382%0.82271%0.709SS**THydrogen-bonded Turntrans-84.7-1.7-176.9-94.6-159.77.800116.1
78H51.8Low53Low192 Ų192126.9 Ų126.989%0.88971%0.713SS**THydrogen-bonded Turntrans-117.222.7178.6-105.731.9000113.4D76D76-H78 PolarHBondContact O-N 3.44Å
79G50.3Low52.6Low69 Ų69128.6 Ų128.671%0.71173%0.727SS**SBendtrans-129.21.818000000116.4
80A42.2Very low52.2Low94 Ų94131.5 Ų131.578%0.77774%0.74SS**  trans-107.4100.6175.500000110.1
81K40.3Very low51.7Low281 Ų281134 Ų134100%1.22276%0.756SS**  trans-57.80158-99.9-177169.2-176.10111.1

Retrieved 81 of 81 residues in 60.4 ms (Link to these results)