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U6 snRNA-associated Sm-like protein LSm5

Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

AlphaFold DB (P62322), UniProt , Accession A0A090N8Y5, Species HUMAN (Homo sapiens, Human), Gene LSM5, Length 91 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M53Low62.2Low248 Ų248130.3 Ų130.3100%1.22279%0.792SS**  01150-71.2-170-165.600107.3
2A50.2Low64.1Low98 Ų98125 Ų12581%0.8176%0.755SS**  trans-76.5127.1175.800000108.7N4A2-N4 PolarHBondContact O-N 3.03Å
3A59Low66.2Low100 Ų100123.5 Ų123.583%0.82674%0.74SS**  trans-68.4116.817400000108.7A5A3-A5 PolarHBondContact O-N 3.29Å
4N55.8Low68Low153 Ų153121.9 Ų121.982%0.81873%0.734SS**  trans-62106.8166.3-82.9-14.2000107.6A2 T6A2-N4 PolarHBondContact O-N 3.03Å; N4-T6 PolarHBondContact O-N 3.19Å
5A61.3Low69.7Low88 Ų88119.7 Ų119.773%0.72772%0.716SS**  trans-61.8104.5165.300000107.1A3 T7A3-A5 PolarHBondContact O-N 3.29Å; A5-T7 VanDerWaalsContact C-N 3.26Å; A5-T7 PolarHBondContact O-N 2.86Å
6T63.5Low71.1Confident134 Ų134117.9 Ų117.982%0.82270%0.698SS**  trans-63.792.3168.347.30000107.4N4 N8N4-T6 PolarHBondContact O-N 3.19Å; T6-N8 PolarHBondContact O-N 2.88Å; T6-N8 VanDerWaalsContact O-N 3.17Å
7T62.2Low72.3Confident118 Ų118115.8 Ų115.872%0.72468%0.682SS**  trans-57.5117166.251.30000106.8A5 P9A5-T7 VanDerWaalsContact C-N 3.26Å; A5-T7 PolarHBondContact O-N 2.86Å; T7-P9 WeakPolarHBondContact O-CD 3.1Å
8N69Low73.6Confident126 Ų126110.1 Ų110.167%0.67465%0.649SS**  trans-62.8109.4172.9-177.64.5000107.8T6 S10T6-N8 PolarHBondContact O-N 2.88Å; T6-N8 VanDerWaalsContact O-N 3.17Å; N8-S10 VanDerWaalsContact CG-OG 3.25Å; N8-S10 PolarHBondContact ND2-OG 2.93Å; N8-S10 PolarHBondContact O-N 2.83Å; N8-S10 WeakPolarHBondContact OD1-CB 3.31Å; N8-S10 PolarHBondContact OD1-N 3.17Å; N8-S10 PolarHBondContact OD1-OG 3.4Å
9P63.2Low74.8Confident113 Ų113109.3 Ų109.373%0.73464%0.641SS**  trans-76.80.4-175.633.7-33.9000112T7 Q11T7-P9 WeakPolarHBondContact O-CD 3.1Å; P9-Q11 PolarHBondContact O-N 2.98Å
10S69.2Low75.8Confident71 Ų71110.6 Ų110.650%0.49764%0.638SS.*  trans-68.596.3-176.971.10000110.8N8 L12N8-S10 VanDerWaalsContact CG-OG 3.25Å; N8-S10 PolarHBondContact ND2-OG 2.93Å; N8-S10 PolarHBondContact O-N 2.83Å; N8-S10 WeakPolarHBondContact OD1-CB 3.31Å; N8-S10 PolarHBondContact OD1-N 3.17Å; N8-S10 PolarHBondContact OD1-OG 3.4Å; S10-L12 PolarHBondContact O-N 3.08Å
11Q77.5Confident76.7Confident184 Ų184105.7 Ų105.786%0.8661%0.611SS**  trans-80.623.4166.3-65.7-177.8-28.300111.8P9 L13P9-Q11 PolarHBondContact O-N 2.98Å; Q11-L13 PolarHBondContact O-N 3.4Å
12L85.6Confident78.8Confident67 Ų6797.2 Ų97.235%0.35157%0.57SS.*  trans-65.9123.8-172.5-139.493000109.6S10 E16 L17 K20S10-L12 PolarHBondContact O-N 3.08Å; L12-E16 HydrophobicContact CD2-CB 4.39Å; L12-E16 HydrophobicContact CG-CB 4.12Å; L12-L17 HydrophobicContact CD2-CB 3.79Å; L12-L17 HydrophobicContact CD2-CD1 3.82Å; L12-L17 HydrophobicContact CD2-CG 4.4Å; L12-K20 VanDerWaalsContact CD1-NZ 3.3Å; L12-K20 HydrophobicContact CD2-CD 4.18Å
13L90.7Very high81.1Confident105 Ų10595.2 Ų95.255%0.5556%0.559SS.*  trans-73.9149.8175.6-62.7175000109.7Q11 L15 E16 L17Q11-L13 PolarHBondContact O-N 3.4Å; L13-L15 VanDerWaalsContact C-N 3.26Å; L13-L15 PolarHBondContact O-N 3.37Å; L13-E16 HydrophobicContact CB-CB 4.34Å; L13-E16 HydrophobicContact CB-CG 3.95Å; L13-E16 PolarHBondContact N-OE2 2.91Å; L13-E16 WeakPolarHBondContact O-CA 3.33Å; L13-E16 WeakPolarHBondContact O-CB 3.46Å; L13-E16 PolarHBondContact O-N 3.14Å; L13-L17 PolarHBondContact O-N 3.36Å
14P91.5Very high82.9Confident102 Ų10293.3 Ų93.366%0.66254%0.539SS*.Hα-helixtrans-53.7-41.8179.5-29.236000113.5L17 V18P14-L17 WeakPolarHBondContact O-CB 3.38Å; P14-L17 PolarHBondContact O-N 3.37Å; P14-L17 VanDerWaalsContact O-N 3.17Å; P14-V18 WeakPolarHBondContact O-CG2 3.45Å; P14-V18 PolarHBondContact O-N 3.21Å
15L93.5Very high84.9Confident89 Ų8990.2 Ų90.247%0.46652%0.516SS..Hα-helixtrans-68.9-33.4177.4-62.7-179.7000112.6L13 L17 V18 D19 F43 V47L13-L15 VanDerWaalsContact C-N 3.26Å; L13-L15 PolarHBondContact O-N 3.37Å; L15-L17 VanDerWaalsContact C-N 3.27Å; L15-L17 PolarHBondContact O-N 3.33Å; L15-V18 PolarHBondContact O-N 3.01Å; L15-D19 WeakPolarHBondContact O-CB 3.35Å; L15-D19 PolarHBondContact O-N 3Å; L15-F43 HydrophobicContact CD2-CE2 4.1Å; L15-V47 HydrophobicContact CD2-CG2 4.21Å
16E92.8Very high86.7Confident90 Ų9086 Ų8642%0.42148%0.481SS..Hα-helixtrans-66-32.3172-66.6173.5176.500111.5L12 L13 K20L12-E16 HydrophobicContact CD2-CB 4.39Å; L12-E16 HydrophobicContact CG-CB 4.12Å; L13-E16 HydrophobicContact CB-CB 4.34Å; L13-E16 HydrophobicContact CB-CG 3.95Å; L13-E16 PolarHBondContact N-OE2 2.91Å; L13-E16 WeakPolarHBondContact O-CA 3.33Å; L13-E16 WeakPolarHBondContact O-CB 3.46Å; L13-E16 PolarHBondContact O-N 3.14Å; E16-K20 WeakPolarHBondContact O-CG 3.36Å; E16-K20 PolarHBondContact O-N 3.26Å
17L91.8Very high88.3Confident83 Ų8380.4 Ų80.444%0.43545%0.446SS..Hα-helixtrans-67.5-43.4173.6-172.858.9000111.2L12 L13 P14 L15 K20 C21 P84L12-L17 HydrophobicContact CD2-CB 3.79Å; L12-L17 HydrophobicContact CD2-CD1 3.82Å; L12-L17 HydrophobicContact CD2-CG 4.4Å; L13-L17 PolarHBondContact O-N 3.36Å; P14-L17 WeakPolarHBondContact O-CB 3.38Å; P14-L17 PolarHBondContact O-N 3.37Å; P14-L17 VanDerWaalsContact O-N 3.17Å; L15-L17 VanDerWaalsContact C-N 3.27Å; L15-L17 PolarHBondContact O-N 3.33Å; L17-K20 PolarHBondContact O-N 3.24Å; L17-C21 PolarHBondContact O-N 3.2Å; L17-C21 PolarHBondContact O-SG 2.72Å; L17-P84 HydrophobicContact CG-CG 4.44Å
18V94.6Very high90Very high13 Ų1374.8 Ų74.88%0.07941%0.411CS..Hα-helixtrans-66.4-40.6178.8179.20000111.1P14 L15 K20 C21 L40 F43 M49 L82P14-V18 WeakPolarHBondContact O-CG2 3.45Å; P14-V18 PolarHBondContact O-N 3.21Å; L15-V18 PolarHBondContact O-N 3.01Å; V18-K20 VanDerWaalsContact C-N 3.29Å; V18-K20 PolarHBondContact O-N 3.06Å; V18-C21 WeakPolarHBondContact O-CA 3.46Å; V18-C21 VanDerWaalsContact O-CB 3.26Å; V18-C21 WeakPolarHBondContact O-CB 3.44Å; V18-C21 PolarHBondContact O-N 2.72Å; V18-L40 HydrophobicContact CG1-CD2 4.01Å; V18-F43 HydrophobicContact CB-CE1 4.33Å; V18-F43 HydrophobicContact CB-CZ 4.27Å; V18-F43 HydrophobicContact CG1-CD1 3.74Å; V18-F43 HydrophobicContact CG1-CD2 4.18Å; V18-F43 HydrophobicContact CG1-CE1 3.82Å; V18-F43 HydrophobicContact CG1-CE2 4.27Å; V18-F43 HydrophobicContact CG1-CG 3.94Å; V18-F43 HydrophobicContact CG1-CZ 4.09Å; V18-M49 HydrophobicContact CG1-CE 3.94Å; V18-L82 HydrophobicContact CG2-CD1 3.63Å
19D96.1Very high91.3Very high95 Ų9570.2 Ų70.251%0.50839%0.388SS..Hα-helixtrans-56.8-42.5173.6-175.173000112.1L15 C21 I22 F43L15-D19 WeakPolarHBondContact O-CB 3.35Å; L15-D19 PolarHBondContact O-N 3Å; D19-C21 PolarHBondContact O-N 2.84Å; D19-C21 VanDerWaalsContact O-N 3.14Å; D19-I22 WeakPolarHBondContact O-CB 3.26Å; D19-I22 VanDerWaalsContact O-CG1 3.3Å; D19-I22 WeakPolarHBondContact O-CG1 3.46Å; D19-I22 PolarHBondContact O-N 2.97Å; D19-I22 VanDerWaalsContact O-N 3.08Å; D19-F43 HydrophobicContact CB-CE1 4.17Å; D19-F43 HydrophobicContact CB-CZ 4.33Å
20K94.8Very high92.8Very high134 Ų13465.7 Ų65.758%0.58336%0.357SS*.THydrogen-bonded Turntrans-65.2-15.4173.9-72.3-178.8-177.3-171.40114.5L12 E16 L17 V18 I22L12-K20 VanDerWaalsContact CD1-NZ 3.3Å; L12-K20 HydrophobicContact CD2-CD 4.18Å; E16-K20 WeakPolarHBondContact O-CG 3.36Å; E16-K20 PolarHBondContact O-N 3.26Å; L17-K20 PolarHBondContact O-N 3.24Å; V18-K20 VanDerWaalsContact C-N 3.29Å; V18-K20 PolarHBondContact O-N 3.06Å; K20-I22 VanDerWaalsContact C-N 3.35Å
21C95.7Very high93.9Very high8 Ų868 Ų685%0.05436%0.358CS..THydrogen-bonded Turntrans-85.2-8.3176.3-59.20000112.8L17 V18 D19 G23 S24 I26 L40 P84L17-C21 PolarHBondContact O-N 3.2Å; L17-C21 PolarHBondContact O-SG 2.72Å; V18-C21 WeakPolarHBondContact O-CA 3.46Å; V18-C21 VanDerWaalsContact O-CB 3.26Å; V18-C21 WeakPolarHBondContact O-CB 3.44Å; V18-C21 PolarHBondContact O-N 2.72Å; D19-C21 PolarHBondContact O-N 2.84Å; D19-C21 VanDerWaalsContact O-N 3.14Å; C21-G23 PolarHBondContact O-N 3.32Å; C21-S24 WeakPolarHBondContact O-CA 3.4Å; C21-S24 WeakPolarHBondContact O-CB 3.39Å; C21-S24 PolarHBondContact O-N 2.88Å; C21-I26 HydrophobicContact CB-CD1 4.25Å; C21-L40 HydrophobicContact CB-CD2 3.97Å; C21-P84 VanDerWaalsContact SG-CB 3.57Å; C21-P84 VanDerWaalsContact SG-CG 3.55Å
22I97.5Very high94.4Very high71 Ų7164.3 Ų64.336%0.36435%0.353SS..THydrogen-bonded Turntrans-60.3133177-63.5171.4000109.6D19 K20 S24 L40 F43D19-I22 WeakPolarHBondContact O-CB 3.26Å; D19-I22 VanDerWaalsContact O-CG1 3.3Å; D19-I22 WeakPolarHBondContact O-CG1 3.46Å; D19-I22 PolarHBondContact O-N 2.97Å; D19-I22 VanDerWaalsContact O-N 3.08Å; K20-I22 VanDerWaalsContact C-N 3.35Å; I22-S24 PolarHBondContact O-N 3.01Å; I22-L40 CarbonylContact C-O 3.57Å; I22-L40 WeakPolarHBondContact CA-O 3.36Å; I22-L40 HydrophobicContact CG1-CD2 4.02Å; I22-L40 HydrophobicContact CG1-CG 4.24Å; I22-F43 HydrophobicContact CD1-CD1 4.33Å; I22-F43 HydrophobicContact CD1-CE1 4.17Å
23G97.7Very high94.6Very high56 Ų5665.9 Ų65.958%0.57736%0.362SS*.THydrogen-bonded Turntrans76.71.2-173.100000114.6C21 L40C21-G23 PolarHBondContact O-N 3.32Å; G23-L40 PolarHBondContact N-O 3.28Å
24S97.8Very high94.8Very high59 Ų5964.2 Ų64.241%0.41335%0.35SS..SBendtrans-113.5158.9179.8-59.80000112C21 I22 T39 L40C21-S24 WeakPolarHBondContact O-CA 3.4Å; C21-S24 WeakPolarHBondContact O-CB 3.39Å; C21-S24 PolarHBondContact O-N 2.88Å; I22-S24 PolarHBondContact O-N 3.01Å; S24-T39 WeakPolarHBondContact O-CA 3.43Å; S24-L40 PolarHBondContact O-N 2.9Å
25R97.4Very high95Very high88 Ų8861.6 Ų61.633%0.33233%0.329SS..EExtended strand (participates in β ladder)trans-61.9135.6171-154.593.3-164157.611.8109.5V37 G38 D53 G85R25-V37 HydrophobicContact CG-CG1 4.05Å; R25-V37 PolarHBondContact NH2-O 3.23Å; R25-G38 CarbonylContact C-O 3.56Å; R25-G38 WeakPolarHBondContact CA-O 3.41Å; R25-D53 PolarHBondContact NH2-O 2.84Å; R25-G85 VanDerWaalsContact O-CA 3.31Å; R25-G85 WeakPolarHBondContact O-CA 2.92Å; R25-G85 PolarHBondContact O-N 3.32Å
26I97.8Very high95.2Very high1 Ų157.8 Ų57.81%0.00531%0.309CS..EExtended strand (participates in β ladder)trans-134.1139.4172.1-165.8166.3000109.3C21 I28 V37 G38 L40 L51 L82C21-I26 HydrophobicContact CB-CD1 4.25Å; I26-I28 HydrophobicContact CG1-CG1 4.27Å; I26-I28 HydrophobicContact CG2-CD1 4.1Å; I26-I28 HydrophobicContact CG2-CG1 4.04Å; I26-V37 WeakPolarHBondContact O-CA 3.26Å; I26-G38 PolarHBondContact N-O 2.77Å; I26-G38 PolarHBondContact O-N 2.94Å; I26-G38 VanDerWaalsContact O-N 3.13Å; I26-L40 HydrophobicContact CG2-CB 4.09Å; I26-L51 HydrophobicContact CG2-CD2 3.6Å; I26-L82 HydrophobicContact CD1-CB 4.2Å; I26-L82 HydrophobicContact CD1-CD2 4Å
27H97.7Very high95.4Very high16 Ų1653.7 Ų53.77%0.07429%0.29CS..EExtended strand (participates in β ladder)trans-103.6125169.1172.7-148000109.1E35 I36 V37 V83H27-E35 IonicContact CE1-OE2 2.92Å; H27-E35 PolarHBondContact CE1-OE2 3.35Å; H27-E35 WeakPolarHBondContact NE2-CB 3.42Å; H27-E35 IonicContact NE2-OE2 2.88Å; H27-E35 PolarHBondContact NE2-OE2 2.86Å; H27-I36 CarbonylContact C-O 3.57Å; H27-I36 WeakPolarHBondContact CA-O 3.28Å; H27-V37 HydrophobicContact CB-CG2 3.93Å; H27-V83 HydrophobicContact CB-CB 4.11Å; H27-V83 PolarHBondContact N-O 2.82Å; H27-V83 PolarHBondContact O-N 3.26Å
28I97.4Very high95.7Very high0 Ų049.7 Ų49.70%027%0.269CS..EExtended strand (participates in β ladder)trans-117.4118.6-174.8-51.7179000108.4I26 M30 E35 I36 M49 L51 L74 I79 M81 L82I26-I28 HydrophobicContact CG1-CG1 4.27Å; I26-I28 HydrophobicContact CG2-CD1 4.1Å; I26-I28 HydrophobicContact CG2-CG1 4.04Å; I28-M30 HydrophobicContact CG2-SD 3.86Å; I28-E35 CarbonylContact O-C 3.59Å; I28-E35 WeakPolarHBondContact O-CA 3.45Å; I28-I36 HydrophobicContact CB-CB 4.37Å; I28-I36 PolarHBondContact N-O 3.15Å; I28-I36 PolarHBondContact O-N 2.76Å; I28-M49 HydrophobicContact CD1-SD 3.54Å; I28-M49 VanDerWaalsContact CD1-SD 3.54Å; I28-L51 HydrophobicContact CD1-CD1 3.55Å; I28-L51 HydrophobicContact CD1-CD2 4.13Å; I28-L51 HydrophobicContact CD1-CG 4.41Å; I28-L74 HydrophobicContact CB-CD2 4.43Å; I28-L74 HydrophobicContact CD1-CD2 3.58Å; I28-L74 HydrophobicContact CG2-CD2 3.86Å; I28-I79 HydrophobicContact CG2-CB 4.46Å; I28-I79 HydrophobicContact CG2-CD1 4.18Å; I28-I79 HydrophobicContact CG2-CG1 3.92Å; I28-I79 HydrophobicContact CG2-CG2 3.96Å; I28-M81 WeakPolarHBondContact CA-O 3.46Å; I28-L82 HydrophobicContact CB-CD2 4.2Å; I28-L82 HydrophobicContact CD1-CD2 4.17Å; I28-L82 HydrophobicContact CG1-CD2 3.69Å; I28-L82 HydrophobicContact CG2-CD2 3.87Å
29V96.6Very high95.9Very high29 Ų2950 Ų5018%0.17627%0.271CS..EExtended strand (participates in β ladder)trans-93121.9172.7-174.90000107.8E35 T80 M81V29-E35 HydrophobicContact CB-CG 4.44Å; V29-E35 HydrophobicContact CG1-CG 4.18Å; V29-E35 HydrophobicContact CG2-CG 4.21Å; V29-T80 WeakPolarHBondContact O-CA 3.47Å; V29-T80 WeakPolarHBondContact O-CB 3.43Å; V29-T80 PolarHBondContact O-N 3.04Å; V29-M81 HydrophobicContact CB-CB 4.15Å; V29-M81 HydrophobicContact CG2-CB 4.38Å; V29-M81 HydrophobicContact CG2-CE 3.73Å; V29-M81 PolarHBondContact N-O 3.13Å; V29-M81 PolarHBondContact O-N 3.23Å; V29-M81 VanDerWaalsContact O-N 3.15Å
30M95.5Very high96Very high18 Ų1845.5 Ų45.59%0.08925%0.247CC..EExtended strand (participates in β ladder)trans-86.9172.6-179.7-57.4-64.6-71.900111.1I28 K34 I36 L74 N78 I79 T80I28-M30 HydrophobicContact CG2-SD 3.86Å; M30-K34 HydrophobicContact CB-CB 4.06Å; M30-K34 VanDerWaalsContact CB-O 3.24Å; M30-K34 WeakPolarHBondContact CB-O 3.3Å; M30-K34 HydrophobicContact CG-CB 4.18Å; M30-K34 PolarHBondContact N-O 3.04Å; M30-I36 HydrophobicContact CG-CD1 4.06Å; M30-I36 HydrophobicContact CG-CG1 4.39Å; M30-I36 HydrophobicContact SD-CD1 4.16Å; M30-L74 HydrophobicContact CE-CD1 3.48Å; M30-L74 VanDerWaalsContact CE-CD1 3.48Å; M30-L74 HydrophobicContact CE-CD2 4.37Å; M30-L74 HydrophobicContact CE-CG 4.02Å; M30-L74 HydrophobicContact SD-CD1 3.8Å; M30-L74 HydrophobicContact SD-CD2 3.77Å; M30-L74 HydrophobicContact SD-CG 4.09Å; M30-N78 CarbonylContact C-O 3.57Å; M30-N78 VanDerWaalsContact C-O 3.31Å; M30-N78 WeakPolarHBondContact CA-O 3.47Å; M30-N78 HydrophobicContact CE-CB 3.44Å; M30-N78 VanDerWaalsContact CE-CB 3.44Å; M30-I79 HydrophobicContact SD-CG1 4.03Å; M30-T80 PolarHBondContact O-OG1 3.13Å
31K91.8Very high96.2Very high119 Ų11942.3 Ų42.352%0.51724%0.236SC..SBendtrans-69.5136.6158.8-66.5179.8-176.9166.60106.8N77 N78 T80K31-N77 VanDerWaalsContact CE-O 3.25Å; K31-N77 WeakPolarHBondContact CE-O 3.4Å; K31-N77 PolarHBondContact NZ-O 3.44Å; K31-N78 PolarHBondContact N-O 2.84Å; K31-T80 PolarHBondContact N-OG1 2.67Å
32S87.4Confident96.3Very high107 Ų10742.8 Ų42.875%0.74824%0.242SC*.SBendtrans77.6-165.4-171.1-48.10000113.7K34S32-K34 PolarHBondContact O-N 3.05Å
33D90.1Very high96.3Very high101 Ų10142.1 Ų42.154%0.5424%0.237SC..SBendtrans-82.333.2-168.2-65.6-51.6000113.9E58 I59D33-E58 CarbonylContact O-C 3.31Å; D33-E58 WeakPolarHBondContact O-CA 3.47Å; D33-I59 HydrophobicContact CB-CB 3.94Å; D33-I59 WeakPolarHBondContact CB-O 3.09Å; D33-I59 PolarHBondContact O-N 2.9Å
34K94.6Very high96.3Very high70 Ų7042.4 Ų42.430%0.30423%0.225SC..EExtended strand (participates in β ladder)trans-122134.3-175.8-68.8-174.6-178.5-124.60112.6M30 S32 E56 F57 E58M30-K34 HydrophobicContact CB-CB 4.06Å; M30-K34 VanDerWaalsContact CB-O 3.24Å; M30-K34 WeakPolarHBondContact CB-O 3.3Å; M30-K34 HydrophobicContact CG-CB 4.18Å; M30-K34 PolarHBondContact N-O 3.04Å; S32-K34 PolarHBondContact O-N 3.05Å; K34-E56 WeakPolarHBondContact CD-OE1 3.4Å; K34-E56 IonicContact NZ-OE1 2.77Å; K34-E56 PolarHBondContact NZ-OE1 2.92Å; K34-F57 CarbonylContact C-O 3.56Å; K34-F57 WeakPolarHBondContact CA-O 3.5Å; K34-E58 WeakPolarHBondContact CE-OE1 3.36Å; K34-E58 HydrophobicContact CG-CB 4.27Å; K34-E58 HydrophobicContact CG-CG 4.08Å; K34-E58 IonicContact NZ-OE1 2.92Å; K34-E58 PolarHBondContact NZ-OE1 3.1Å; K34-E58 IonicContact NZ-OE2 3.75Å
35E96.8Very high96.1Very high46 Ų4646.7 Ų46.722%0.21524%0.243CC..EExtended strand (participates in β ladder)trans-131.1139.3174.8-74.2178.4-125.300108.9H27 I28 V29 F57 P89H27-E35 IonicContact CE1-OE2 2.92Å; H27-E35 PolarHBondContact CE1-OE2 3.35Å; H27-E35 WeakPolarHBondContact NE2-CB 3.42Å; H27-E35 IonicContact NE2-OE2 2.88Å; H27-E35 PolarHBondContact NE2-OE2 2.86Å; I28-E35 CarbonylContact O-C 3.59Å; I28-E35 WeakPolarHBondContact O-CA 3.45Å; V29-E35 HydrophobicContact CB-CG 4.44Å; V29-E35 HydrophobicContact CG1-CG 4.18Å; V29-E35 HydrophobicContact CG2-CG 4.21Å; E35-F57 HydrophobicContact CB-CB 4.26Å; E35-F57 HydrophobicContact CB-CD2 4.44Å; E35-F57 PolarHBondContact N-O 3.12Å; E35-F57 PolarHBondContact O-N 2.74Å; E35-P89 WeakPolarHBondContact OE2-CD 3.25Å; E35-P89 VanDerWaalsContact OE2-CG 3.3Å; E35-P89 WeakPolarHBondContact OE2-CG 3.26Å
36I97.3Very high96Very high9 Ų949.8 Ų49.85%0.04626%0.259CS..EExtended strand (participates in β ladder)trans-130.1129-172.5-62.4174.9000108.9H27 I28 M30 L51 V54 T55 E56 I72 L74H27-I36 CarbonylContact C-O 3.57Å; H27-I36 WeakPolarHBondContact CA-O 3.28Å; I28-I36 HydrophobicContact CB-CB 4.37Å; I28-I36 PolarHBondContact N-O 3.15Å; I28-I36 PolarHBondContact O-N 2.76Å; M30-I36 HydrophobicContact CG-CD1 4.06Å; M30-I36 HydrophobicContact CG-CG1 4.39Å; M30-I36 HydrophobicContact SD-CD1 4.16Å; I36-L51 HydrophobicContact CG2-CD1 4.02Å; I36-V54 HydrophobicContact CG2-CG1 3.59Å; I36-T55 WeakPolarHBondContact CA-O 3.49Å; I36-E56 HydrophobicContact CG1-CG 4.4Å; I36-I72 HydrophobicContact CD1-CD1 4.13Å; I36-I72 HydrophobicContact CG2-CD1 4.11Å; I36-L74 HydrophobicContact CD1-CD1 3.39Å; I36-L74 HydrophobicContact CD1-CD2 4.2Å; I36-L74 HydrophobicContact CD1-CG 4.43Å
37V97.9Very high95.9Very high4 Ų451.3 Ų51.32%0.02427%0.269CS..EExtended strand (participates in β ladder)trans-123.2117.1177.4177.20000109.4R25 I26 H27 V54 T55 F57 G88R25-V37 HydrophobicContact CG-CG1 4.05Å; R25-V37 PolarHBondContact NH2-O 3.23Å; I26-V37 WeakPolarHBondContact O-CA 3.26Å; H27-V37 HydrophobicContact CB-CG2 3.93Å; V37-V54 CarbonylContact O-C 3.54Å; V37-V54 WeakPolarHBondContact O-CA 3.3Å; V37-T55 PolarHBondContact N-O 2.88Å; V37-T55 PolarHBondContact O-N 2.81Å; V37-F57 HydrophobicContact CB-CE2 4.2Å; V37-F57 HydrophobicContact CG2-CD2 4.36Å; V37-F57 HydrophobicContact CG2-CE2 3.74Å; V37-G88 VanDerWaalsContact CG2-CA 3.43Å
38G97.9Very high95.9Very high0 Ų052.3 Ų52.30%028%0.275CS..EExtended strand (participates in β ladder)trans-154178-178.600000111.9R25 I26 E52R25-G38 CarbonylContact C-O 3.56Å; R25-G38 WeakPolarHBondContact CA-O 3.41Å; I26-G38 PolarHBondContact N-O 2.77Å; I26-G38 PolarHBondContact O-N 2.94Å; I26-G38 VanDerWaalsContact O-N 3.13Å; G38-E52 WeakPolarHBondContact CA-O 3.36Å
39T98.3Very high95.9Very high20 Ų2052.3 Ų52.312%0.12328%0.275CS..EExtended strand (participates in β ladder)trans-90.8123.8171.1-580000108.7S24 L41 L51 E52S24-T39 WeakPolarHBondContact O-CA 3.43Å; T39-L41 PolarHBondContact O-N 3.14Å; T39-L51 VanDerWaalsContact O-CA 3.28Å; T39-L51 WeakPolarHBondContact O-CA 3.35Å; T39-E52 HydrophobicContact CG2-CG 4.34Å; T39-E52 PolarHBondContact N-O 2.8Å; T39-E52 PolarHBondContact O-N 3.3Å
40L98.4Very high96Very high0 Ų053.4 Ų53.40%028%0.282CS..EExtended strand (participates in β ladder)trans-72.4117.9179.9-179.763.7000110.6V18 C21 I22 G23 S24 I26 G42 M49 L51V18-L40 HydrophobicContact CG1-CD2 4.01Å; C21-L40 HydrophobicContact CB-CD2 3.97Å; I22-L40 CarbonylContact C-O 3.57Å; I22-L40 WeakPolarHBondContact CA-O 3.36Å; I22-L40 HydrophobicContact CG1-CD2 4.02Å; I22-L40 HydrophobicContact CG1-CG 4.24Å; G23-L40 PolarHBondContact N-O 3.28Å; S24-L40 PolarHBondContact O-N 2.9Å; I26-L40 HydrophobicContact CG2-CB 4.09Å; L40-G42 WeakPolarHBondContact CD1-O 3.48Å; L40-M49 HydrophobicContact CD1-CB 3.95Å; L40-M49 HydrophobicContact CD1-CG 4.11Å; L40-M49 HydrophobicContact CD1-SD 3.94Å; L40-L51 HydrophobicContact CB-CD2 4.2Å; L40-L51 HydrophobicContact CD1-CD2 4.15Å
41L98.3Very high96.1Very high66 Ų6652.6 Ų52.635%0.34628%0.277SS..EExtended strand (participates in β ladder)trans-89.3-31.9175-69.6-177.4000112.5T39 V50 E52T39-L41 PolarHBondContact O-N 3.14Å; L41-V50 HydrophobicContact CB-CB 4.2Å; L41-V50 HydrophobicContact CB-CG1 4.12Å; L41-V50 WeakPolarHBondContact CB-O 3.36Å; L41-V50 HydrophobicContact CD1-CG1 3.99Å; L41-V50 PolarHBondContact N-O 3.07Å; L41-E52 HydrophobicContact CD1-CB 3.92Å; L41-E52 HydrophobicContact CD1-CG 4.1Å; L41-E52 VanDerWaalsContact CD2-CD 3.46Å; L41-E52 HydrophobicContact CD2-CG 3.95Å; L41-E52 HydrophobicContact CG-CB 4.26Å; L41-E52 HydrophobicContact CG-CG 3.96Å
42G98Very high96.4Very high19 Ų1950.3 Ų50.320%0.19627%0.268CS..EExtended strand (participates in β ladder)trans172.9168.9178.900000111.7L40 M49 V50L40-G42 WeakPolarHBondContact CD1-O 3.48Å; G42-M49 WeakPolarHBondContact O-CA 3.45Å; G42-V50 PolarHBondContact O-N 2.82Å
43F98Very high96.9Very high56 Ų5650 Ų5025%0.24626%0.258CS..EExtended strand (participates in β ladder)trans-146.3166177.570.9-74.5000110.9L15 V18 D19 I22 N48 M49L15-F43 HydrophobicContact CD2-CE2 4.1Å; V18-F43 HydrophobicContact CB-CE1 4.33Å; V18-F43 HydrophobicContact CB-CZ 4.27Å; V18-F43 HydrophobicContact CG1-CD1 3.74Å; V18-F43 HydrophobicContact CG1-CD2 4.18Å; V18-F43 HydrophobicContact CG1-CE1 3.82Å; V18-F43 HydrophobicContact CG1-CE2 4.27Å; V18-F43 HydrophobicContact CG1-CG 3.94Å; V18-F43 HydrophobicContact CG1-CZ 4.09Å; D19-F43 HydrophobicContact CB-CE1 4.17Å; D19-F43 HydrophobicContact CB-CZ 4.33Å; I22-F43 HydrophobicContact CD1-CD1 4.33Å; I22-F43 HydrophobicContact CD1-CE1 4.17Å; F43-N48 CarbonylContact C-O 3.57Å; F43-N48 WeakPolarHBondContact CA-O 3.46Å; F43-N48 WeakPolarHBondContact CB-O 3.25Å; F43-M49 HydrophobicContact CB-CG 4.06Å
44D96.5Very high97.3Very high62 Ų6245.2 Ų45.233%0.33223%0.233SC..  trans-111.3-179.7175.372.25.3000112.7F46 V47 N48D44-F46 PolarHBondContact O-N 3.45Å; D44-F46 VanDerWaalsContact O-N 3.1Å; D44-F46 WeakPolarHBondContact OD1-CA 3.44Å; D44-F46 PolarHBondContact OD1-N 2.98Å; D44-V47 PolarHBondContact O-N 3.17Å; D44-V47 PolarHBondContact OD1-N 2.99Å; D44-N48 PolarHBondContact N-O 2.83Å; D44-N48 VanDerWaalsContact N-O 3.12Å; D44-N48 WeakPolarHBondContact OD1-CB 3.47Å; D44-N48 PolarHBondContact OD1-N 3.22Å; D44-N48 PolarHBondContact OD1-ND2 2.78Å; D44-N48 PolarHBondContact OD2-ND2 2.94Å
45D94.4Very high97.4Very high149 Ų14942.2 Ų42.280%0.79722%0.22SC*.THydrogen-bonded Turntrans-61.1-19.5179.5-66.5-25.3000113.9
46F94.9Very high97.4Very high153 Ų15341.6 Ų41.667%0.67122%0.218SC*.THydrogen-bonded Turntrans-95.45.2176.4-58.1-75.8000112.5D44 N48D44-F46 PolarHBondContact O-N 3.45Å; D44-F46 VanDerWaalsContact O-N 3.1Å; D44-F46 WeakPolarHBondContact OD1-CA 3.44Å; D44-F46 PolarHBondContact OD1-N 2.98Å; F46-N48 PolarHBondContact O-N 2.97Å
47V95.5Very high97.3Very high33 Ų3341.9 Ų41.920%0.222%0.219CC..  trans62.127.9-178.4-161.60000111.7L15 D44 M49 G76 I79 L82L15-V47 HydrophobicContact CD2-CG2 4.21Å; D44-V47 PolarHBondContact O-N 3.17Å; D44-V47 PolarHBondContact OD1-N 2.99Å; V47-M49 HydrophobicContact CG1-CE 3.42Å; V47-M49 VanDerWaalsContact CG1-CE 3.42Å; V47-G76 WeakPolarHBondContact O-CA 3.38Å; V47-I79 HydrophobicContact CG1-CD1 4.24Å; V47-I79 WeakPolarHBondContact O-CD1 3.45Å; V47-L82 HydrophobicContact CG1-CD1 4.32Å
48N97.3Very high97.2Very high38 Ų3843.9 Ų43.920%0.20323%0.228CC..  trans-68.9135.6161.5-58.1-56.6000107.9F43 D44 F46 L74 N75 G76F43-N48 CarbonylContact C-O 3.57Å; F43-N48 WeakPolarHBondContact CA-O 3.46Å; F43-N48 WeakPolarHBondContact CB-O 3.25Å; D44-N48 PolarHBondContact N-O 2.83Å; D44-N48 VanDerWaalsContact N-O 3.12Å; D44-N48 WeakPolarHBondContact OD1-CB 3.47Å; D44-N48 PolarHBondContact OD1-N 3.22Å; D44-N48 PolarHBondContact OD1-ND2 2.78Å; D44-N48 PolarHBondContact OD2-ND2 2.94Å; F46-N48 PolarHBondContact O-N 2.97Å; N48-L74 CarbonylContact C-O 3.57Å; N48-L74 WeakPolarHBondContact CA-O 3.41Å; N48-L74 WeakPolarHBondContact CB-O 3.43Å; N48-N75 WeakPolarHBondContact OD1-CA 3.35Å; N48-G76 PolarHBondContact OD1-N 2.67Å
49M98Very high96.9Very high0 Ų048.6 Ų48.60%025%0.252CS..EExtended strand (participates in β ladder)trans-122.8137.8-170.9-59.8-169.1171.400112V18 I28 L40 G42 F43 V47 L51 L73 L74 I79 L82V18-M49 HydrophobicContact CG1-CE 3.94Å; I28-M49 HydrophobicContact CD1-SD 3.54Å; I28-M49 VanDerWaalsContact CD1-SD 3.54Å; L40-M49 HydrophobicContact CD1-CB 3.95Å; L40-M49 HydrophobicContact CD1-CG 4.11Å; L40-M49 HydrophobicContact CD1-SD 3.94Å; G42-M49 WeakPolarHBondContact O-CA 3.45Å; F43-M49 HydrophobicContact CB-CG 4.06Å; V47-M49 HydrophobicContact CG1-CE 3.42Å; V47-M49 VanDerWaalsContact CG1-CE 3.42Å; M49-L51 HydrophobicContact CB-CG 4.43Å; M49-L73 CarbonylContact O-C 3.56Å; M49-L73 WeakPolarHBondContact O-CA 3.47Å; M49-L74 HydrophobicContact CB-CB 4.25Å; M49-L74 PolarHBondContact N-O 3.07Å; M49-L74 PolarHBondContact O-N 3.07Å; M49-I79 HydrophobicContact CE-CD1 4.12Å; M49-I79 HydrophobicContact CG-CD1 4.23Å; M49-I79 HydrophobicContact SD-CD1 4.1Å; M49-L82 HydrophobicContact CE-CD1 3.41Å; M49-L82 VanDerWaalsContact CE-CD1 3.41Å; M49-L82 HydrophobicContact CE-CD2 3.47Å; M49-L82 VanDerWaalsContact CE-CD2 3.47Å; M49-L82 HydrophobicContact CE-CG 4.08Å; M49-L82 HydrophobicContact SD-CD2 3.99Å
50V98.3Very high96.5Very high52 Ų5249.3 Ų49.332%0.31526%0.256SS..EExtended strand (participates in β ladder)trans-97126165.8-174.20000107.7L41 G42 Q71 I72 L73L41-V50 HydrophobicContact CB-CB 4.2Å; L41-V50 HydrophobicContact CB-CG1 4.12Å; L41-V50 WeakPolarHBondContact CB-O 3.36Å; L41-V50 HydrophobicContact CD1-CG1 3.99Å; L41-V50 PolarHBondContact N-O 3.07Å; G42-V50 PolarHBondContact O-N 2.82Å; V50-Q71 HydrophobicContact CG1-CG 4.26Å; V50-I72 WeakPolarHBondContact CA-O 3.2Å; V50-L73 HydrophobicContact CG2-CD1 3.99Å
51L98.5Very high96.2Very high0 Ų055.5 Ų55.50%030%0.296CS..EExtended strand (participates in β ladder)trans-127.3146.6-179.4-61.7153.1000110.1I26 I28 I36 T39 L40 M49 V54 Q71 I72 L74I26-L51 HydrophobicContact CG2-CD2 3.6Å; I28-L51 HydrophobicContact CD1-CD1 3.55Å; I28-L51 HydrophobicContact CD1-CD2 4.13Å; I28-L51 HydrophobicContact CD1-CG 4.41Å; I36-L51 HydrophobicContact CG2-CD1 4.02Å; T39-L51 VanDerWaalsContact O-CA 3.28Å; T39-L51 WeakPolarHBondContact O-CA 3.35Å; L40-L51 HydrophobicContact CB-CD2 4.2Å; L40-L51 HydrophobicContact CD1-CD2 4.15Å; M49-L51 HydrophobicContact CB-CG 4.43Å; L51-V54 HydrophobicContact CB-CG2 3.62Å; L51-Q71 CarbonylContact O-C 3.58Å; L51-Q71 VanDerWaalsContact O-CA 3.25Å; L51-Q71 WeakPolarHBondContact O-CA 3.49Å; L51-Q71 WeakPolarHBondContact O-CG 3.49Å; L51-I72 HydrophobicContact CB-CG1 4.11Å; L51-I72 HydrophobicContact CD1-CD1 4.06Å; L51-I72 HydrophobicContact CD1-CG1 4.17Å; L51-I72 PolarHBondContact N-O 2.8Å; L51-I72 VanDerWaalsContact N-O 3.07Å; L51-I72 PolarHBondContact O-N 3.15Å; L51-L74 HydrophobicContact CD1-CB 4.43Å; L51-L74 HydrophobicContact CD1-CD2 4.16Å
52E98.3Very high95.9Very high71 Ų7160.2 Ų60.233%0.33232%0.317SS..EExtended strand (participates in β ladder)trans-118.6166.8169.467.4-177.8-17700112.2G38 T39 L41 V54 D70G38-E52 WeakPolarHBondContact CA-O 3.36Å; T39-E52 HydrophobicContact CG2-CG 4.34Å; T39-E52 PolarHBondContact N-O 2.8Å; T39-E52 PolarHBondContact O-N 3.3Å; L41-E52 HydrophobicContact CD1-CB 3.92Å; L41-E52 HydrophobicContact CD1-CG 4.1Å; L41-E52 VanDerWaalsContact CD2-CD 3.46Å; L41-E52 HydrophobicContact CD2-CG 3.95Å; L41-E52 HydrophobicContact CG-CB 4.26Å; L41-E52 HydrophobicContact CG-CG 3.96Å; E52-V54 VanDerWaalsContact C-N 3.3Å; E52-V54 PolarHBondContact O-N 2.91Å; E52-D70 CarbonylContact C-O 3.55Å; E52-D70 VanDerWaalsContact CA-O 3.26Å; E52-D70 WeakPolarHBondContact CA-O 3.12Å
53D97.7Very high95.5Very high100 Ų10060.9 Ų60.954%0.53532%0.324SS..EExtended strand (participates in β ladder)trans51.347.8-179.3-67.7-36.2000112.7R25 D70R25-D53 PolarHBondContact NH2-O 2.84Å; D53-D70 PolarHBondContact N-O 3.02Å
54V97.9Very high95.1Very high1 Ų162.2 Ų62.21%0.00633%0.327CS..EExtended strand (participates in β ladder)trans-84139.7-164.4179.40000111.8I36 V37 L51 E52 K68 L69 I72I36-V54 HydrophobicContact CG2-CG1 3.59Å; V37-V54 CarbonylContact O-C 3.54Å; V37-V54 WeakPolarHBondContact O-CA 3.3Å; L51-V54 HydrophobicContact CB-CG2 3.62Å; E52-V54 VanDerWaalsContact C-N 3.3Å; E52-V54 PolarHBondContact O-N 2.91Å; V54-K68 WeakPolarHBondContact O-CA 3.45Å; V54-L69 HydrophobicContact CB-CB 4.22Å; V54-L69 WeakPolarHBondContact CB-O 3.45Å; V54-L69 PolarHBondContact N-O 2.76Å; V54-L69 PolarHBondContact O-N 2.96Å; V54-I72 HydrophobicContact CB-CG2 4.5Å; V54-I72 HydrophobicContact CG1-CD1 4.13Å; V54-I72 HydrophobicContact CG1-CG2 4.46Å; V54-I72 HydrophobicContact CG2-CG1 4.13Å; V54-I72 HydrophobicContact CG2-CG2 4.33Å
55T97.4Very high95Very high7 Ų766.3 Ų66.34%0.04334%0.338CS..EExtended strand (participates in β ladder)trans-120.2113.9166.5-460000108.7I36 V37 F57 I66 T67 K68I36-T55 WeakPolarHBondContact CA-O 3.49Å; V37-T55 PolarHBondContact N-O 2.88Å; V37-T55 PolarHBondContact O-N 2.81Å; T55-F57 HydrophobicContact CG2-CD1 4.36Å; T55-F57 HydrophobicContact CG2-CE1 3.71Å; T55-F57 HydrophobicContact CG2-CE2 3.86Å; T55-F57 HydrophobicContact CG2-CZ 3.45Å; T55-F57 VanDerWaalsContact CG2-CZ 3.45Å; T55-I66 HydrophobicContact CG2-CG2 3.64Å; T55-T67 CarbonylContact C-O 3.59Å; T55-T67 WeakPolarHBondContact CA-O 3.33Å; T55-K68 HydrophobicContact CG2-CD 3.99Å; T55-K68 WeakPolarHBondContact OG1-CD 3.24Å; T55-K68 WeakPolarHBondContact OG1-CE 3.18Å; T55-K68 PolarHBondContact OG1-NZ 3.31Å
56E96.3Very high95.1Very high33 Ų3363.1 Ų63.115%0.15432%0.32CS..EExtended strand (participates in β ladder)trans-93131.6171.5-177.9-174.7-16700108.9K34 I36 I66 T67K34-E56 WeakPolarHBondContact CD-OE1 3.4Å; K34-E56 IonicContact NZ-OE1 2.77Å; K34-E56 PolarHBondContact NZ-OE1 2.92Å; I36-E56 HydrophobicContact CG1-CG 4.4Å; E56-I66 WeakPolarHBondContact O-CA 3.33Å; E56-T67 PolarHBondContact N-O 2.79Å; E56-T67 PolarHBondContact O-N 2.83Å
57F96Very high95.1Very high16 Ų1657.5 Ų57.57%0.0730%0.298CS..EExtended strand (participates in β ladder)trans-113.4120.7171.3-55.1-76.2000108.1K34 E35 V37 T55 R64 R65 I66 P89K34-F57 CarbonylContact C-O 3.56Å; K34-F57 WeakPolarHBondContact CA-O 3.5Å; E35-F57 HydrophobicContact CB-CB 4.26Å; E35-F57 HydrophobicContact CB-CD2 4.44Å; E35-F57 PolarHBondContact N-O 3.12Å; E35-F57 PolarHBondContact O-N 2.74Å; V37-F57 HydrophobicContact CB-CE2 4.2Å; V37-F57 HydrophobicContact CG2-CD2 4.36Å; V37-F57 HydrophobicContact CG2-CE2 3.74Å; T55-F57 HydrophobicContact CG2-CD1 4.36Å; T55-F57 HydrophobicContact CG2-CE1 3.71Å; T55-F57 HydrophobicContact CG2-CE2 3.86Å; T55-F57 HydrophobicContact CG2-CZ 3.45Å; T55-F57 VanDerWaalsContact CG2-CZ 3.45Å; F57-R64 VanDerWaalsContact CD1-CZ 3.47Å; F57-R65 WeakPolarHBondContact CA-O 3.43Å; F57-I66 HydrophobicContact CD1-CB 4.46Å; F57-I66 HydrophobicContact CD1-CD1 4.16Å; F57-I66 HydrophobicContact CD1-CG1 3.91Å; F57-I66 HydrophobicContact CD1-CG2 4.07Å; F57-I66 HydrophobicContact CE1-CD1 4.02Å; F57-I66 HydrophobicContact CE1-CG1 4.21Å; F57-I66 HydrophobicContact CE1-CG2 3.93Å; F57-P89 HydrophobicContact CB-CG 4.49Å; F57-P89 HydrophobicContact CD2-CG 4.42Å; F57-P89 HydrophobicContact CG-CG 4.4Å
58E95Very high95.2Very high46 Ų4663.1 Ų63.122%0.21532%0.32CS..EExtended strand (participates in β ladder)trans-122.5124179.5-179.2175.8-143.300108.8D33 K34 T60 R64 R65D33-E58 CarbonylContact O-C 3.31Å; D33-E58 WeakPolarHBondContact O-CA 3.47Å; K34-E58 WeakPolarHBondContact CE-OE1 3.36Å; K34-E58 HydrophobicContact CG-CB 4.27Å; K34-E58 HydrophobicContact CG-CG 4.08Å; K34-E58 IonicContact NZ-OE1 2.92Å; K34-E58 PolarHBondContact NZ-OE1 3.1Å; K34-E58 IonicContact NZ-OE2 3.75Å; E58-T60 HydrophobicContact CG-CG2 3.91Å; E58-T60 PolarHBondContact O-N 2.9Å; E58-R64 CarbonylContact O-C 3.52Å; E58-R64 WeakPolarHBondContact O-CA 3.48Å; E58-R65 HydrophobicContact CB-CB 4.39Å; E58-R65 PolarHBondContact N-O 3.32Å; E58-R65 PolarHBondContact O-N 2.96Å
59I91.5Very high95.2Very high98 Ų9864.5 Ų64.550%0.50333%0.327SS..EExtended strand (participates in β ladder)trans-83.9114.8171.9-51.6169.2000107.3D33D33-I59 HydrophobicContact CB-CB 3.94Å; D33-I59 WeakPolarHBondContact CB-O 3.09Å; D33-I59 PolarHBondContact O-N 2.9Å
60T91.1Very high95.2Very high35 Ų3571.4 Ų71.422%0.21536%0.364CS..EExtended strand (participates in β ladder)trans-110.2162176.666.40000109.6E58 E62 G63 R65E58-T60 HydrophobicContact CG-CG2 3.91Å; E58-T60 PolarHBondContact O-N 2.9Å; T60-E62 PolarHBondContact O-N 3.48Å; T60-E62 VanDerWaalsContact O-N 3.11Å; T60-E62 PolarHBondContact OG1-OE2 2.9Å; T60-G63 WeakPolarHBondContact CA-O 3.36Å; T60-G63 PolarHBondContact N-O 2.76Å; T60-G63 PolarHBondContact O-N 2.85Å; T60-G63 PolarHBondContact OG1-N 2.79Å; T60-G63 PolarHBondContact OG1-O 2.9Å; T60-R65 HydrophobicContact CG2-CB 4.28Å
61P91.2Very high95.2Very high130 Ų13074.9 Ų74.984%0.84438%0.377SS*.THydrogen-bonded Turntrans-54.5-27.2172.8-26.336000113.8
62E91.4Very high95.2Very high166 Ų16676.4 Ų76.478%0.77638%0.384SS*.THydrogen-bonded Turntrans-84.1-8178.3-59.373.8-15700113.7T60T60-E62 PolarHBondContact O-N 3.48Å; T60-E62 VanDerWaalsContact O-N 3.11Å; T60-E62 PolarHBondContact OG1-OE2 2.9Å
63G90Very high95.2Very high33 Ų3379.5 Ų79.534%0.3440%0.402SS..EExtended strand (participates in β ladder)trans126.6-164.6-177.300000113.3T60T60-G63 WeakPolarHBondContact CA-O 3.36Å; T60-G63 PolarHBondContact N-O 2.76Å; T60-G63 PolarHBondContact O-N 2.85Å; T60-G63 PolarHBondContact OG1-N 2.79Å; T60-G63 PolarHBondContact OG1-O 2.9Å
64R90.9Very high95.1Very high83 Ų8375.4 Ų75.431%0.31338%0.38SS..EExtended strand (participates in β ladder)trans-84.1118.4179.8-175.4173.1171.7-169.3-3.8110.6F57 E58 I66 P89 E90F57-R64 VanDerWaalsContact CD1-CZ 3.47Å; E58-R64 CarbonylContact O-C 3.52Å; E58-R64 WeakPolarHBondContact O-CA 3.48Å; R64-I66 HydrophobicContact CG-CG1 4.44Å; R64-P89 PolarHBondContact NH1-O 2.77Å; R64-P89 PolarHBondContact NH2-O 2.86Å; R64-E90 PolarHBondContact NH1-O 2.94Å
65R94Very high95Very high149 Ų14979 Ų7956%0.56240%0.399SS*.EExtended strand (participates in β ladder)trans-91.2131.9170.8-177.5178.5178.5170.60.7109.5F57 E58 T60F57-R65 WeakPolarHBondContact CA-O 3.43Å; E58-R65 HydrophobicContact CB-CB 4.39Å; E58-R65 PolarHBondContact N-O 3.32Å; E58-R65 PolarHBondContact O-N 2.96Å; T60-R65 HydrophobicContact CG2-CB 4.28Å
66I95.2Very high94.9Very high82 Ų8279.2 Ų79.242%0.42140%0.403SS..EExtended strand (participates in β ladder)trans-115.1122.7177.1-49.3-175.1000108.5T55 E56 F57 R64T55-I66 HydrophobicContact CG2-CG2 3.64Å; E56-I66 WeakPolarHBondContact O-CA 3.33Å; F57-I66 HydrophobicContact CD1-CB 4.46Å; F57-I66 HydrophobicContact CD1-CD1 4.16Å; F57-I66 HydrophobicContact CD1-CG1 3.91Å; F57-I66 HydrophobicContact CD1-CG2 4.07Å; F57-I66 HydrophobicContact CE1-CD1 4.02Å; F57-I66 HydrophobicContact CE1-CG1 4.21Å; F57-I66 HydrophobicContact CE1-CG2 3.93Å; R64-I66 HydrophobicContact CG-CG1 4.44Å
67T96.4Very high94.9Very high35 Ų3582.9 Ų82.922%0.21542%0.424CS..EExtended strand (participates in β ladder)trans-120.8132.8178.1-52.50000109.5T55 E56 L69T55-T67 CarbonylContact C-O 3.59Å; T55-T67 WeakPolarHBondContact CA-O 3.33Å; E56-T67 PolarHBondContact N-O 2.79Å; E56-T67 PolarHBondContact O-N 2.83Å; T67-L69 HydrophobicContact CG2-CD2 4.05Å; T67-L69 HydrophobicContact CG2-CG 4.14Å
68K97.2Very high94.8Very high151 Ų15185.9 Ų85.966%0.65744%0.441SS*.EExtended strand (participates in β ladder)trans-101.3134.2173.1-65.9-71.7-175.4171.60109.2V54 T55V54-K68 WeakPolarHBondContact O-CA 3.45Å; T55-K68 HydrophobicContact CG2-CD 3.99Å; T55-K68 WeakPolarHBondContact OG1-CD 3.24Å; T55-K68 WeakPolarHBondContact OG1-CE 3.18Å; T55-K68 PolarHBondContact OG1-NZ 3.31Å
69L97.8Very high94.9Very high67 Ų6785 Ų8535%0.35144%0.437SS..EExtended strand (participates in β ladder)trans-136.6140.1-178.9-59.6168.6000108.9V54 T67 I72V54-L69 HydrophobicContact CB-CB 4.22Å; V54-L69 WeakPolarHBondContact CB-O 3.45Å; V54-L69 PolarHBondContact N-O 2.76Å; V54-L69 PolarHBondContact O-N 2.96Å; T67-L69 HydrophobicContact CG2-CD2 4.05Å; T67-L69 HydrophobicContact CG2-CG 4.14Å; L69-I72 HydrophobicContact CB-CG2 3.93Å; L69-I72 HydrophobicContact CD1-CG2 3.57Å; L69-I72 HydrophobicContact CG-CG2 4.38Å
70D97.8Very high95.1Very high145 Ų14584.7 Ų84.778%0.77544%0.44SS*.EExtended strand (participates in β ladder)trans-70.4-45.3-177.8-62-19.7000111.4E52 D53E52-D70 CarbonylContact C-O 3.55Å; E52-D70 VanDerWaalsContact CA-O 3.26Å; E52-D70 WeakPolarHBondContact CA-O 3.12Å; D53-D70 PolarHBondContact N-O 3.02Å
71Q97.8Very high95.4Very high125 Ų12587.9 Ų87.958%0.58445%0.454SS*.EExtended strand (participates in β ladder)trans-151143.5179.2-171175.563.800111V50 L51V50-Q71 HydrophobicContact CG1-CG 4.26Å; L51-Q71 CarbonylContact O-C 3.58Å; L51-Q71 VanDerWaalsContact O-CA 3.25Å; L51-Q71 WeakPolarHBondContact O-CA 3.49Å; L51-Q71 WeakPolarHBondContact O-CG 3.49Å
72I98.1Very high95.6Very high31 Ų3183.8 Ų83.816%0.15943%0.425CS..EExtended strand (participates in β ladder)trans-135.1157.3173.676.4172.2000111.8I36 V50 L51 V54 L69 L74I36-I72 HydrophobicContact CD1-CD1 4.13Å; I36-I72 HydrophobicContact CG2-CD1 4.11Å; V50-I72 WeakPolarHBondContact CA-O 3.2Å; L51-I72 HydrophobicContact CB-CG1 4.11Å; L51-I72 HydrophobicContact CD1-CD1 4.06Å; L51-I72 HydrophobicContact CD1-CG1 4.17Å; L51-I72 PolarHBondContact N-O 2.8Å; L51-I72 VanDerWaalsContact N-O 3.07Å; L51-I72 PolarHBondContact O-N 3.15Å; V54-I72 HydrophobicContact CB-CG2 4.5Å; V54-I72 HydrophobicContact CG1-CD1 4.13Å; V54-I72 HydrophobicContact CG1-CG2 4.46Å; V54-I72 HydrophobicContact CG2-CG1 4.13Å; V54-I72 HydrophobicContact CG2-CG2 4.33Å; L69-I72 HydrophobicContact CB-CG2 3.93Å; L69-I72 HydrophobicContact CD1-CG2 3.57Å; L69-I72 HydrophobicContact CG-CG2 4.38Å; I72-L74 HydrophobicContact CD1-CB 4.32Å; I72-L74 HydrophobicContact CD1-CD1 4.2Å
73L97.8Very high95.9Very high136 Ų13678.2 Ų78.271%0.71240%0.402SS*.EExtended strand (participates in β ladder)trans-105.6120.9158.2176.665.4000108.3M49 V50M49-L73 CarbonylContact O-C 3.56Å; M49-L73 WeakPolarHBondContact O-CA 3.47Å; V50-L73 HydrophobicContact CG2-CD1 3.99Å
74L96.5Very high96.2Very high14 Ų1479.8 Ų79.87%0.07341%0.406CS..EExtended strand (participates in β ladder)trans-101.9133.9-178.3-168.665.3000110.9I28 M30 I36 N48 M49 L51 I72 I79I28-L74 HydrophobicContact CB-CD2 4.43Å; I28-L74 HydrophobicContact CD1-CD2 3.58Å; I28-L74 HydrophobicContact CG2-CD2 3.86Å; M30-L74 HydrophobicContact CE-CD1 3.48Å; M30-L74 VanDerWaalsContact CE-CD1 3.48Å; M30-L74 HydrophobicContact CE-CD2 4.37Å; M30-L74 HydrophobicContact CE-CG 4.02Å; M30-L74 HydrophobicContact SD-CD1 3.8Å; M30-L74 HydrophobicContact SD-CD2 3.77Å; M30-L74 HydrophobicContact SD-CG 4.09Å; I36-L74 HydrophobicContact CD1-CD1 3.39Å; I36-L74 HydrophobicContact CD1-CD2 4.2Å; I36-L74 HydrophobicContact CD1-CG 4.43Å; N48-L74 CarbonylContact C-O 3.57Å; N48-L74 WeakPolarHBondContact CA-O 3.41Å; N48-L74 WeakPolarHBondContact CB-O 3.43Å; M49-L74 HydrophobicContact CB-CB 4.25Å; M49-L74 PolarHBondContact N-O 3.07Å; M49-L74 PolarHBondContact O-N 3.07Å; L51-L74 HydrophobicContact CD1-CB 4.43Å; L51-L74 HydrophobicContact CD1-CD2 4.16Å; I72-L74 HydrophobicContact CD1-CB 4.32Å; I72-L74 HydrophobicContact CD1-CD1 4.2Å; L74-I79 HydrophobicContact CD2-CD1 3.98Å; L74-I79 HydrophobicContact CD2-CG1 4.14Å
75N95.6Very high96.4Very high76 Ų7678.3 Ų78.341%0.40642%0.417SS..  trans-81119.4177-172.7-39.4000111.1N48 N77 N78N48-N75 WeakPolarHBondContact OD1-CA 3.35Å; N75-N77 VanDerWaalsContact C-N 3.26Å; N75-N77 PolarHBondContact O-N 3.11Å; N75-N77 VanDerWaalsContact OD1-CB 3.26Å; N75-N77 WeakPolarHBondContact OD1-CB 3.38Å; N75-N77 PolarHBondContact OD1-N 3.4Å; N75-N78 PolarHBondContact O-N 2.83Å
76G95.9Very high96.3Very high12 Ų1271.9 Ų71.912%0.12440%0.396CS..G310 helixtrans-62.7-26.7-177.300000114.5V47 N48 N78 I79V47-G76 WeakPolarHBondContact O-CA 3.38Å; N48-G76 PolarHBondContact OD1-N 2.67Å; G76-N78 PolarHBondContact O-N 2.95Å; G76-N78 VanDerWaalsContact O-N 3.13Å; G76-I79 PolarHBondContact O-N 2.92Å
77N95.7Very high96.2Very high110 Ų11076.4 Ų76.459%0.58842%0.416SS*.G310 helixtrans-63.5-23.3178.9-70.2-35000113.2K31 N75K31-N77 VanDerWaalsContact CE-O 3.25Å; K31-N77 WeakPolarHBondContact CE-O 3.4Å; K31-N77 PolarHBondContact NZ-O 3.44Å; N75-N77 VanDerWaalsContact C-N 3.26Å; N75-N77 PolarHBondContact O-N 3.11Å; N75-N77 VanDerWaalsContact OD1-CB 3.26Å; N75-N77 WeakPolarHBondContact OD1-CB 3.38Å; N75-N77 PolarHBondContact OD1-N 3.4Å
78N94.9Very high95.9Very high80 Ų8075.7 Ų75.743%0.42842%0.416SS..G310 helixtrans-98.65.3-180-67-28.8000112.6M30 K31 N75 G76M30-N78 CarbonylContact C-O 3.57Å; M30-N78 VanDerWaalsContact C-O 3.31Å; M30-N78 WeakPolarHBondContact CA-O 3.47Å; M30-N78 HydrophobicContact CE-CB 3.44Å; M30-N78 VanDerWaalsContact CE-CB 3.44Å; K31-N78 PolarHBondContact N-O 2.84Å; N75-N78 PolarHBondContact O-N 2.83Å; G76-N78 PolarHBondContact O-N 2.95Å; G76-N78 VanDerWaalsContact O-N 3.13Å
79I96.3Very high95.5Very high27 Ų2770.4 Ų70.414%0.13840%0.397CS..EExtended strand (participates in β ladder)trans-82132.2176.6-62.8178.2000109.3I28 M30 V47 M49 L74 G76 L82I28-I79 HydrophobicContact CG2-CB 4.46Å; I28-I79 HydrophobicContact CG2-CD1 4.18Å; I28-I79 HydrophobicContact CG2-CG1 3.92Å; I28-I79 HydrophobicContact CG2-CG2 3.96Å; M30-I79 HydrophobicContact SD-CG1 4.03Å; V47-I79 HydrophobicContact CG1-CD1 4.24Å; V47-I79 WeakPolarHBondContact O-CD1 3.45Å; M49-I79 HydrophobicContact CE-CD1 4.12Å; M49-I79 HydrophobicContact CG-CD1 4.23Å; M49-I79 HydrophobicContact SD-CD1 4.1Å; L74-I79 HydrophobicContact CD2-CD1 3.98Å; L74-I79 HydrophobicContact CD2-CG1 4.14Å; G76-I79 PolarHBondContact O-N 2.92Å; I79-L82 HydrophobicContact CD1-CD2 4.44Å; I79-L82 HydrophobicContact CG2-CD2 3.84Å; I79-L82 HydrophobicContact CG2-CG 4.01Å
80T96.4Very high94.5Very high92 Ų9276.2 Ų76.256%0.56442%0.422SS*.EExtended strand (participates in β ladder)trans-102.8-44.9174.8-57.60000111V29 M30 K31V29-T80 WeakPolarHBondContact O-CA 3.47Å; V29-T80 WeakPolarHBondContact O-CB 3.43Å; V29-T80 PolarHBondContact O-N 3.04Å; M30-T80 PolarHBondContact O-OG1 3.13Å; K31-T80 PolarHBondContact N-OG1 2.67Å
81M95.9Very high92.7Very high101 Ų10177.4 Ų77.450%0.49843%0.434SS..EExtended strand (participates in β ladder)trans-148.9147.2-177-174.5172.561.600111.3I28 V29 V83I28-M81 WeakPolarHBondContact CA-O 3.46Å; V29-M81 HydrophobicContact CB-CB 4.15Å; V29-M81 HydrophobicContact CG2-CB 4.38Å; V29-M81 HydrophobicContact CG2-CE 3.73Å; V29-M81 PolarHBondContact N-O 3.13Å; V29-M81 PolarHBondContact O-N 3.23Å; V29-M81 VanDerWaalsContact O-N 3.15Å; M81-V83 HydrophobicContact CE-CG2 3.83Å; M81-V83 HydrophobicContact CG-CG2 4.16Å; M81-V83 HydrophobicContact SD-CG2 4.27Å
82L96.7Very high92.4Very high45 Ų4575 Ų7524%0.23643%0.427CS..EExtended strand (participates in β ladder)trans-118.7127.4174.6-63.5172.5000108.9V18 I26 I28 V47 M49 I79V18-L82 HydrophobicContact CG2-CD1 3.63Å; I26-L82 HydrophobicContact CD1-CB 4.2Å; I26-L82 HydrophobicContact CD1-CD2 4Å; I28-L82 HydrophobicContact CB-CD2 4.2Å; I28-L82 HydrophobicContact CD1-CD2 4.17Å; I28-L82 HydrophobicContact CG1-CD2 3.69Å; I28-L82 HydrophobicContact CG2-CD2 3.87Å; V47-L82 HydrophobicContact CG1-CD1 4.32Å; M49-L82 HydrophobicContact CE-CD1 3.41Å; M49-L82 VanDerWaalsContact CE-CD1 3.41Å; M49-L82 HydrophobicContact CE-CD2 3.47Å; M49-L82 VanDerWaalsContact CE-CD2 3.47Å; M49-L82 HydrophobicContact CE-CG 4.08Å; M49-L82 HydrophobicContact SD-CD2 3.99Å; I79-L82 HydrophobicContact CD1-CD2 4.44Å; I79-L82 HydrophobicContact CG2-CD2 3.84Å; I79-L82 HydrophobicContact CG2-CG 4.01Å
83V96.7Very high92.1Very high48 Ų4877.3 Ų77.329%0.29144%0.441SS..EExtended strand (participates in β ladder)trans-121.197.8-179.4-175.90000108.5H27 M81 G85 G86H27-V83 HydrophobicContact CB-CB 4.11Å; H27-V83 PolarHBondContact N-O 2.82Å; H27-V83 PolarHBondContact O-N 3.26Å; M81-V83 HydrophobicContact CE-CG2 3.83Å; M81-V83 HydrophobicContact CG-CG2 4.16Å; M81-V83 HydrophobicContact SD-CG2 4.27Å; V83-G85 PolarHBondContact O-N 2.94Å; V83-G86 PolarHBondContact O-N 3.02Å; V83-G86 VanDerWaalsContact O-N 3.15Å
84P95.8Very high91.8Very high67 Ų6774.1 Ų74.144%0.43543%0.426SS..EExtended strand (participates in β ladder)trans-56.3129.4175.1-25.835.7000111.4L17 C21 G86L17-P84 HydrophobicContact CG-CG 4.44Å; C21-P84 VanDerWaalsContact SG-CB 3.57Å; C21-P84 VanDerWaalsContact SG-CG 3.55Å; P84-G86 PolarHBondContact O-N 3.25Å
85G94.7Very high91.5Very high52 Ų5277.6 Ų77.654%0.53645%0.446SS..THydrogen-bonded Turntrans70.84.8-179.700000115.4R25 V83R25-G85 VanDerWaalsContact O-CA 3.31Å; R25-G85 WeakPolarHBondContact O-CA 2.92Å; R25-G85 PolarHBondContact O-N 3.32Å; V83-G85 PolarHBondContact O-N 2.94Å
86G93.4Very high91.3Very high13 Ų1377.7 Ų77.713%0.13445%0.449CS..  trans-68143.7179.400000112.8V83 P84V83-G86 PolarHBondContact O-N 3.02Å; V83-G86 VanDerWaalsContact O-N 3.15Å; P84-G86 PolarHBondContact O-N 3.25Å
87E92Very high91Very high177 Ų17782.1 Ų82.183%0.82747%0.471SS*.  trans-97.1-0.8-178.7-60.9-17216100113.4
88G90.3Very high90.6Very high21 Ų2180.1 Ų80.122%0.21646%0.462CS..  trans91-172.4-17400000112.6V37V37-G88 VanDerWaalsContact CG2-CA 3.43Å
89P88.9Confident90.3Very high40 Ų4080.1 Ų80.126%0.2647%0.465SS..SBendtrans-68.2139.5175.46.50.2000110.2E35 F57 R64 V91E35-P89 WeakPolarHBondContact OE2-CD 3.25Å; E35-P89 VanDerWaalsContact OE2-CG 3.3Å; E35-P89 WeakPolarHBondContact OE2-CG 3.26Å; F57-P89 HydrophobicContact CB-CG 4.49Å; F57-P89 HydrophobicContact CD2-CG 4.42Å; F57-P89 HydrophobicContact CG-CG 4.4Å; R64-P89 PolarHBondContact NH1-O 2.77Å; R64-P89 PolarHBondContact NH2-O 2.86Å; P89-V91 PolarHBondContact O-N 2.73Å
90E77.5Confident89.8Confident189 Ų18984.5 Ų84.588%0.88349%0.492SS*.  trans-50.8132169.8-65.4-176.7176.100109.2R64R64-E90 PolarHBondContact NH1-O 2.94Å
91V59.4Low89.2Confident169 Ų16983.8 Ų83.8100%1.02449%0.485SS*.  trans-81.60177.8-178.30000109.5P89P89-V91 PolarHBondContact O-N 2.73Å

Retrieved 91 of 91 residues in 17 ms (Link to these results)