A0A093H4M0_STRCA Loading...

Cortexin-1

AlphaFold DB (A0A6I9HTA9), UniProt , Accession A0A093H4M0, Species STRCA (Struthio camelus australis), Gene n/a, Length 84 aa.

Structure Viewer
Loading PAE data...
(Predicted Aligned Error values between residue pairs)
Error loading PAE data: please refresh the page.

Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M51.4Low55.8Low225 Ų225130.7 Ų130.7100%1.10870%0.701SS**  0126.80-98.477.5162.400107.5
2N56.2Low55.7Low155 Ų155131.4 Ų131.483%0.82970%0.704SS**  trans109.931.3165.6-56-25.2000121
3D55.6Low55.5Low151 Ų151127 Ų12781%0.80769%0.689SS**SBendtrans-119.8-0.6169.3-63.1-70.5000114.6
4A55.7Low55.1Low93 Ų93125.7 Ų125.777%0.76969%0.691SS**SBendtrans-98.6-13.2-171.800000115.5
5S56.3Low54.6Low95 Ų95123.8 Ų123.866%0.66469%0.69SS**SBendtrans-101.217-177.1-74.40000113.8D8 Y9S5-D8 WeakPolarHBondContact CA-OD1 3.24Å; S5-D8 VanDerWaalsContact O-OD1 3.12Å; S5-Y9 WeakPolarHBondContact O-CD1 3.47Å
6T56.6Low54.5Low62 Ų62125.9 Ų125.938%0.3870%0.698SS.*SBendtrans-100.2-15.3-172.4-160.90000114.4Y9T6-Y9 VanDerWaalsContact C-CE1 3.43Å; T6-Y9 VanDerWaalsContact O-CD1 3.29Å; T6-Y9 WeakPolarHBondContact O-CD1 3.06Å; T6-Y9 WeakPolarHBondContact O-CE1 3.4Å; T6-Y9 PolarHBondContact O-OH 2.72Å; T6-Y9 WeakPolarHBondContact OG1-CE1 3.36Å; T6-Y9 PolarHBondContact OG1-OH 2.78Å
7M59.8Low54.3Low161 Ų161125.8 Ų125.879%0.79370%0.702SS**SBendtrans-101.8-13.3-174.7-57.9-160.5104.800112.9
8D56.5Low53.5Low84 Ų84128.9 Ų128.945%0.44971%0.71SS.*Hα-helixtrans-82.6-23.8174.451.7-63.6000112.9S5 L12S5-D8 WeakPolarHBondContact CA-OD1 3.24Å; S5-D8 VanDerWaalsContact O-OD1 3.12Å; D8-L12 VanDerWaalsContact O-CD1 3.25Å; D8-L12 WeakPolarHBondContact O-CD1 3.05Å; D8-L12 PolarHBondContact O-N 3.42Å
9Y56.2Low53.2Low124 Ų124131 Ų13149%0.48671%0.713SS.*Hα-helixtrans-79.5-28.8177.568.7-114.6000114.2S5 T6 S13S5-Y9 WeakPolarHBondContact O-CD1 3.47Å; T6-Y9 VanDerWaalsContact C-CE1 3.43Å; T6-Y9 VanDerWaalsContact O-CD1 3.29Å; T6-Y9 WeakPolarHBondContact O-CD1 3.06Å; T6-Y9 WeakPolarHBondContact O-CE1 3.4Å; T6-Y9 PolarHBondContact O-OH 2.72Å; T6-Y9 WeakPolarHBondContact OG1-CE1 3.36Å; T6-Y9 PolarHBondContact OG1-OH 2.78Å; Y9-S13 PolarHBondContact O-N 2.73Å; Y9-S13 PolarHBondContact O-OG 3.32Å
10E54.1Low53Low139 Ų139129.1 Ų129.165%0.6571%0.708SS**Hα-helixtrans-75.5-30.5174.8-79.3-73.5101.400111.6S13E10-S13 PolarHBondContact O-N 2.66Å
11L55.3Low52.8Low149 Ų149127.9 Ų127.978%0.7872%0.715SS**Hα-helixtrans-83.7-22.1179.4-157.8134.9000112.9S13L11-S13 VanDerWaalsContact C-N 3.32Å
12L55.2Low52.7Low139 Ų139119.5 Ų119.573%0.72869%0.687SS**SBendtrans-87.12.3167.1-91.799.5000114D8 P14D8-L12 VanDerWaalsContact O-CD1 3.25Å; D8-L12 WeakPolarHBondContact O-CD1 3.05Å; D8-L12 PolarHBondContact O-N 3.42Å; L12-P14 WeakPolarHBondContact O-CD 3.04Å
13S52.9Low52.4Low74 Ų74117.1 Ų117.152%0.51769%0.688SS.*  trans-108.169.2171.4-63.80000111.5Y9 E10 L11 S15Y9-S13 PolarHBondContact O-N 2.73Å; Y9-S13 PolarHBondContact O-OG 3.32Å; E10-S13 PolarHBondContact O-N 2.66Å; L11-S13 VanDerWaalsContact C-N 3.32Å; S13-S15 PolarHBondContact O-N 3.03Å
14P50.3Low52.4Low109 Ų109113.6 Ų113.671%0.70868%0.68SS**  trans-67.891145.928.4-20.3000106L12 L16L12-P14 WeakPolarHBondContact O-CD 3.04Å; P14-L16 PolarHBondContact O-N 2.78Å; P14-L16 VanDerWaalsContact O-N 3.16Å
15S47.2Very low52.7Low97 Ų97112.1 Ų112.168%0.67867%0.674SS**  trans-28.4119144.745.70000110.3S13 V17S13-S15 PolarHBondContact O-N 3.03Å; S15-V17 PolarHBondContact O-N 3.46Å; S15-V17 VanDerWaalsContact O-N 3.14Å
16L53.4Low53.1Low158 Ų158112.7 Ų112.783%0.82767%0.668SS**SBend37.179114.7-175.2144.2000112.1P14P14-L16 PolarHBondContact O-N 2.78Å; P14-L16 VanDerWaalsContact O-N 3.16Å
17V49.9Very low54Low124 Ų124115.1 Ų115.175%0.75268%0.678SS**  -175.663.6129.4-168.60000106.8S15S15-V17 PolarHBondContact O-N 3.46Å; S15-V17 VanDerWaalsContact O-N 3.14Å
18E40Very low55Low181 Ų181111.2 Ų111.285%0.84667%0.671SS**  trans-113.669.4143-153.6167.8114.500104.9P20E18-P20 WeakPolarHBondContact O-CD 3.06Å; E18-P20 VanDerWaalsContact O-N 3.15Å
19H48.5Very low56.3Low169 Ų169114.8 Ų114.878%0.78269%0.685SS**  trans-56.1110.6135.5-92.380.5000102.2A21H19-A21 PolarHBondContact O-N 3.15Å
20P48.7Very low57.7Low93 Ų93113.1 Ų113.160%0.60468%0.682SS**  trans-51.1131.5164.724.2-31.2000103.8E18 G22E18-P20 WeakPolarHBondContact O-CD 3.06Å; E18-P20 VanDerWaalsContact O-N 3.15Å; P20-G22 PolarHBondContact O-N 3.3Å
21A49.7Very low59.2Low103 Ų103112.9 Ų112.985%0.85168%0.679SS**  trans-5960.7156.500000108H19 A23H19-A21 PolarHBondContact O-N 3.15Å; A21-A23 PolarHBondContact O-N 2.79Å
22G48.2Very low60.9Low50 Ų50110 Ų11052%0.51567%0.668SS.*  trans-92.339.3178.200000109.1P20 A24P20-G22 PolarHBondContact O-N 3.3Å; G22-A24 VanDerWaalsContact CA-N 3.33Å; G22-A24 PolarHBondContact O-N 3.27Å
23A50.8Low62.7Low105 Ų105107.6 Ų107.687%0.86866%0.658SS**  trans-72.116.2138.700000110.5A21 G25A21-A23 PolarHBondContact O-N 2.79Å; A23-G25 PolarHBondContact O-N 2.78Å; A23-G25 VanDerWaalsContact O-N 3.15Å
24A56Low64.5Low77 Ų77109 Ų10964%0.63666%0.655SS**SBendtrans-56.1112.1155.400000107.2G22 M26G22-A24 VanDerWaalsContact CA-N 3.33Å; G22-A24 PolarHBondContact O-N 3.27Å; A24-M26 PolarHBondContact O-N 3.32Å
25G60.8Low66.5Low62 Ų62106.6 Ų106.664%0.63964%0.644SS**  trans-42.3126.4-17100000111.6A23 D27A23-G25 PolarHBondContact O-N 2.78Å; A23-G25 VanDerWaalsContact O-N 3.15Å; G25-D27 PolarHBondContact O-N 2.79Å
26M64.7Low68.9Low107 Ų107108 Ų10853%0.52764%0.638SS.*  trans-50.1110.8178.1-152.4151.263.500108.6A24 Q30 K31A24-M26 PolarHBondContact O-N 3.32Å; M26-Q30 HydrophobicContact CG-CB 3.94Å; M26-Q30 HydrophobicContact CG-CG 3.65Å; M26-Q30 HydrophobicContact SD-CG 4.4Å; M26-K31 HydrophobicContact CE-CG 4.42Å
27D76.4Confident70.9Confident113 Ų113104.3 Ų104.360%0.60462%0.622SS**  trans-52.3146.4-177.3-70-62.4000109.4G25 E29 Q30 K31G25-D27 PolarHBondContact O-N 2.79Å; D27-E29 PolarHBondContact O-N 3.25Å; D27-Q30 WeakPolarHBondContact O-CA 3.46Å; D27-Q30 WeakPolarHBondContact O-CB 2.99Å; D27-Q30 PolarHBondContact O-N 2.74Å; D27-K31 PolarHBondContact O-N 3.03Å
28A80.6Confident73.1Confident78 Ų78103.1 Ų103.165%0.64561%0.611SS**Hα-helixtrans-53.4-34.4-177.900000111.7K31 T32A28-K31 PolarHBondContact O-N 3.41Å; A28-T32 WeakPolarHBondContact O-CG2 3.47Å; A28-T32 PolarHBondContact O-N 3.32Å; A28-T32 PolarHBondContact O-OG1 3.36Å
29E84.3Confident75.8Confident159 Ų159100.7 Ų100.774%0.74360%0.598SS**Hα-helixtrans-59.4-48.4172.4-56.7-99.5113.200112.1D27 K31 T32 V33D27-E29 PolarHBondContact O-N 3.25Å; E29-K31 VanDerWaalsContact C-N 3.33Å; E29-K31 PolarHBondContact O-N 2.64Å; E29-T32 PolarHBondContact O-N 3.32Å; E29-T32 PolarHBondContact O-OG1 2.9Å; E29-V33 VanDerWaalsContact O-CG2 3.29Å; E29-V33 WeakPolarHBondContact O-CG2 2.82Å; E29-V33 PolarHBondContact O-N 2.89Å; E29-V33 VanDerWaalsContact O-N 3.08Å
30Q84.6Confident78.1Confident90 Ų9096.3 Ų96.342%0.42158%0.579SS.*Hα-helixtrans-66.7-38.6178.1-175.7168.4-39.900110.6M26 D27 T32 V33 F34M26-Q30 HydrophobicContact CG-CB 3.94Å; M26-Q30 HydrophobicContact CG-CG 3.65Å; M26-Q30 HydrophobicContact SD-CG 4.4Å; D27-Q30 WeakPolarHBondContact O-CA 3.46Å; D27-Q30 WeakPolarHBondContact O-CB 2.99Å; D27-Q30 PolarHBondContact O-N 2.74Å; Q30-T32 PolarHBondContact O-N 3.36Å; Q30-V33 PolarHBondContact O-N 2.72Å; Q30-F34 HydrophobicContact CG-CD2 3.61Å; Q30-F34 HydrophobicContact CG-CE2 3.62Å; Q30-F34 VanDerWaalsContact O-CD2 3.31Å; Q30-F34 WeakPolarHBondContact O-CD2 3.49Å; Q30-F34 PolarHBondContact O-N 3.48Å
31K86.6Confident80.3Confident134 Ų13497.2 Ų97.258%0.58358%0.578SS**Hα-helixtrans-63.4-39.1178.2-160.8172.980.3173.40112.4M26 D27 A28 E29 A35M26-K31 HydrophobicContact CE-CG 4.42Å; D27-K31 PolarHBondContact O-N 3.03Å; A28-K31 PolarHBondContact O-N 3.41Å; E29-K31 VanDerWaalsContact C-N 3.33Å; E29-K31 PolarHBondContact O-N 2.64Å; K31-A35 VanDerWaalsContact O-CB 3.25Å; K31-A35 WeakPolarHBondContact O-CB 3.2Å; K31-A35 PolarHBondContact O-N 3.23Å
32T91Very high82.5Confident89 Ų8996.5 Ų96.555%0.54656%0.564SS.*Hα-helixtrans-70.4-39.417656.50000111.6A28 E29 Q30 A35 F36A28-T32 WeakPolarHBondContact O-CG2 3.47Å; A28-T32 PolarHBondContact O-N 3.32Å; A28-T32 PolarHBondContact O-OG1 3.36Å; E29-T32 PolarHBondContact O-N 3.32Å; E29-T32 PolarHBondContact O-OG1 2.9Å; Q30-T32 PolarHBondContact O-N 3.36Å; T32-A35 PolarHBondContact O-N 3.43Å; T32-F36 WeakPolarHBondContact O-CB 3.28Å; T32-F36 PolarHBondContact O-N 3.48Å
33V92.5Very high84.7Confident88 Ų8898.9 Ų98.953%0.53356%0.56SS.*Hα-helixtrans-60.9-49.9174.81730000110.5E29 Q30 A35 F36 V37E29-V33 VanDerWaalsContact O-CG2 3.29Å; E29-V33 WeakPolarHBondContact O-CG2 2.82Å; E29-V33 PolarHBondContact O-N 2.89Å; E29-V33 VanDerWaalsContact O-N 3.08Å; Q30-V33 PolarHBondContact O-N 2.72Å; V33-A35 VanDerWaalsContact C-N 3.34Å; V33-A35 PolarHBondContact O-N 3.31Å; V33-F36 PolarHBondContact O-N 3.33Å; V33-V37 HydrophobicContact CG1-CG2 4.3Å; V33-V37 WeakPolarHBondContact O-CB 3.32Å; V33-V37 VanDerWaalsContact O-CG2 3.24Å; V33-V37 WeakPolarHBondContact O-CG2 3.1Å; V33-V37 PolarHBondContact O-N 2.87Å
34F90.8Very high86.8Confident104 Ų10499.3 Ų99.346%0.45655%0.547SS..Hα-helixtrans-61.4-42.1176.2-88.6-81.7000112.1Q30 F36 V37 I38Q30-F34 HydrophobicContact CG-CD2 3.61Å; Q30-F34 HydrophobicContact CG-CE2 3.62Å; Q30-F34 VanDerWaalsContact O-CD2 3.31Å; Q30-F34 WeakPolarHBondContact O-CD2 3.49Å; Q30-F34 PolarHBondContact O-N 3.48Å; F34-F36 VanDerWaalsContact C-N 3.33Å; F34-F36 PolarHBondContact O-N 2.8Å; F34-V37 PolarHBondContact O-N 3.49Å; F34-I38 WeakPolarHBondContact O-CB 3.34Å; F34-I38 WeakPolarHBondContact O-CD1 3.01Å; F34-I38 WeakPolarHBondContact O-CG1 3.5Å; F34-I38 PolarHBondContact O-N 2.75Å
35A92.7Very high88.6Confident57 Ų5799.4 Ų99.447%0.47154%0.539SS..Hα-helixtrans-60.8-42.2175.500000111.8K31 T32 V33 F39K31-A35 VanDerWaalsContact O-CB 3.25Å; K31-A35 WeakPolarHBondContact O-CB 3.2Å; K31-A35 PolarHBondContact O-N 3.23Å; T32-A35 PolarHBondContact O-N 3.43Å; V33-A35 VanDerWaalsContact C-N 3.34Å; V33-A35 PolarHBondContact O-N 3.31Å; A35-F39 WeakPolarHBondContact O-CB 3.27Å; A35-F39 PolarHBondContact O-N 3.49Å
36F95.8Very high90.1Very high127 Ų127100.1 Ų100.156%0.55753%0.527SS*.Hα-helixtrans-68.5-42.3178-172-106.1000111.8T32 V33 F34 F39 L40T32-F36 WeakPolarHBondContact O-CB 3.28Å; T32-F36 PolarHBondContact O-N 3.48Å; V33-F36 PolarHBondContact O-N 3.33Å; F34-F36 VanDerWaalsContact C-N 3.33Å; F34-F36 PolarHBondContact O-N 2.8Å; F36-F39 PolarHBondContact O-N 2.96Å; F36-L40 HydrophobicContact CD1-CD1 3.76Å; F36-L40 HydrophobicContact CD1-CG 4.05Å; F36-L40 HydrophobicContact CE1-CD1 3.26Å; F36-L40 HydrophobicContact CE1-CD2 4.32Å; F36-L40 HydrophobicContact CE1-CG 3.77Å; F36-L40 HydrophobicContact CE2-CD2 4.32Å; F36-L40 HydrophobicContact CE2-CG 4.33Å; F36-L40 HydrophobicContact CG-CG 4.48Å; F36-L40 HydrophobicContact CZ-CD1 3.76Å; F36-L40 HydrophobicContact CZ-CD2 3.97Å; F36-L40 HydrophobicContact CZ-CG 3.91Å; F36-L40 WeakPolarHBondContact O-CB 3.27Å; F36-L40 VanDerWaalsContact O-CG 3.31Å; F36-L40 WeakPolarHBondContact O-CG 3.33Å; F36-L40 PolarHBondContact O-N 2.92Å
37V96.3Very high91.2Very high80 Ų8098.4 Ų98.449%0.48552%0.52SS..Hα-helixtrans-61.3-46.9175.5171.30000110.7V33 F34 L40 L41V33-V37 HydrophobicContact CG1-CG2 4.3Å; V33-V37 WeakPolarHBondContact O-CB 3.32Å; V33-V37 VanDerWaalsContact O-CG2 3.24Å; V33-V37 WeakPolarHBondContact O-CG2 3.1Å; V33-V37 PolarHBondContact O-N 2.87Å; F34-V37 PolarHBondContact O-N 3.49Å; V37-L40 PolarHBondContact O-N 3.16Å; V37-L41 WeakPolarHBondContact O-CB 3.14Å; V37-L41 PolarHBondContact O-N 3.49Å
38I96.1Very high91.7Very high100 Ų10096.9 Ų96.951%0.51351%0.51SS..Hα-helixtrans-63.5-44.5176.5-67.1165.7000110.4F34 L40 L41 V42F34-I38 WeakPolarHBondContact O-CB 3.34Å; F34-I38 WeakPolarHBondContact O-CD1 3.01Å; F34-I38 WeakPolarHBondContact O-CG1 3.5Å; F34-I38 PolarHBondContact O-N 2.75Å; I38-L40 PolarHBondContact O-N 3.14Å; I38-L41 WeakPolarHBondContact O-CB 3.11Å; I38-L41 PolarHBondContact O-N 3.44Å; I38-V42 HydrophobicContact CG2-CG2 4.42Å; I38-V42 WeakPolarHBondContact O-CG2 3.49Å; I38-V42 PolarHBondContact O-N 2.9Å
39F96.8Very high92.1Very high130 Ų13096.7 Ų96.757%0.5750%0.5SS*.Hα-helixtrans-59.8-46.7177.3178-94.7000111.6A35 F36 L41 V42 F43A35-F39 WeakPolarHBondContact O-CB 3.27Å; A35-F39 PolarHBondContact O-N 3.49Å; F36-F39 PolarHBondContact O-N 2.96Å; F39-L41 VanDerWaalsContact C-N 3.33Å; F39-L41 PolarHBondContact O-N 3.42Å; F39-V42 PolarHBondContact O-N 2.84Å; F39-F43 VanDerWaalsContact O-CB 3.25Å; F39-F43 WeakPolarHBondContact O-CB 3.38Å; F39-F43 PolarHBondContact O-N 2.82Å
40L96.1Very high92.1Very high76 Ų7695.9 Ų95.940%0.39849%0.491SS..Hα-helixtrans-63.4-38.9175.9-75-170.3000111.8F36 V37 I38 F43 L44F36-L40 HydrophobicContact CD1-CD1 3.76Å; F36-L40 HydrophobicContact CD1-CG 4.05Å; F36-L40 HydrophobicContact CE1-CD1 3.26Å; F36-L40 HydrophobicContact CE1-CD2 4.32Å; F36-L40 HydrophobicContact CE1-CG 3.77Å; F36-L40 HydrophobicContact CE2-CD2 4.32Å; F36-L40 HydrophobicContact CE2-CG 4.33Å; F36-L40 HydrophobicContact CG-CG 4.48Å; F36-L40 HydrophobicContact CZ-CD1 3.76Å; F36-L40 HydrophobicContact CZ-CD2 3.97Å; F36-L40 HydrophobicContact CZ-CG 3.91Å; F36-L40 WeakPolarHBondContact O-CB 3.27Å; F36-L40 VanDerWaalsContact O-CG 3.31Å; F36-L40 WeakPolarHBondContact O-CG 3.33Å; F36-L40 PolarHBondContact O-N 2.92Å; V37-L40 PolarHBondContact O-N 3.16Å; I38-L40 PolarHBondContact O-N 3.14Å; L40-F43 PolarHBondContact O-N 3.43Å; L40-L44 WeakPolarHBondContact O-CB 3.26Å; L40-L44 PolarHBondContact O-N 2.99Å
41L96.2Very high91.7Very high112 Ų11294.6 Ų94.659%0.58649%0.491SS*.Hα-helixtrans-63.7-46.7176.6-163.9100.8000110.9V37 I38 F39 L44 V45V37-L41 WeakPolarHBondContact O-CB 3.14Å; V37-L41 PolarHBondContact O-N 3.49Å; I38-L41 WeakPolarHBondContact O-CB 3.11Å; I38-L41 PolarHBondContact O-N 3.44Å; F39-L41 VanDerWaalsContact C-N 3.33Å; F39-L41 PolarHBondContact O-N 3.42Å; L41-L44 PolarHBondContact O-N 2.63Å; L41-V45 WeakPolarHBondContact O-CG2 3.25Å; L41-V45 PolarHBondContact O-N 3.45Å
42V96.3Very high91.1Very high89 Ų8993 Ų9354%0.53948%0.484SS..Hα-helixtrans-63.5-43.9176.11720000110.8I38 F39 L44 V45 M46I38-V42 HydrophobicContact CG2-CG2 4.42Å; I38-V42 WeakPolarHBondContact O-CG2 3.49Å; I38-V42 PolarHBondContact O-N 2.9Å; F39-V42 PolarHBondContact O-N 2.84Å; V42-L44 VanDerWaalsContact C-N 3.34Å; V42-V45 PolarHBondContact O-N 3.31Å; V42-M46 VanDerWaalsContact O-CB 3.28Å; V42-M46 WeakPolarHBondContact O-CB 3.49Å; V42-M46 PolarHBondContact O-N 3.4Å
43F94.5Very high90.3Very high99 Ų9997.7 Ų97.743%0.43449%0.492SS..Hα-helixtrans-62.9-41.9176.4-177.3-106.9000111.2F39 L40 M46 L47F39-F43 VanDerWaalsContact O-CB 3.25Å; F39-F43 WeakPolarHBondContact O-CB 3.38Å; F39-F43 PolarHBondContact O-N 2.82Å; L40-F43 PolarHBondContact O-N 3.43Å; F43-M46 PolarHBondContact O-N 3.32Å; F43-L47 HydrophobicContact CD1-CD1 3.74Å; F43-L47 HydrophobicContact CD1-CG 4.01Å; F43-L47 HydrophobicContact CD2-CG 4.38Å; F43-L47 HydrophobicContact CE1-CD1 3.15Å; F43-L47 HydrophobicContact CE1-CD2 4.35Å; F43-L47 HydrophobicContact CE1-CG 3.68Å; F43-L47 HydrophobicContact CE2-CD1 4.35Å; F43-L47 HydrophobicContact CE2-CD2 4.11Å; F43-L47 HydrophobicContact CE2-CG 4.04Å; F43-L47 HydrophobicContact CG-CG 4.37Å; F43-L47 HydrophobicContact CZ-CD1 3.51Å; F43-L47 HydrophobicContact CZ-CD2 3.86Å; F43-L47 HydrophobicContact CZ-CG 3.68Å; F43-L47 VanDerWaalsContact O-CB 3.26Å; F43-L47 WeakPolarHBondContact O-CB 3.22Å; F43-L47 VanDerWaalsContact O-CG 3.32Å; F43-L47 WeakPolarHBondContact O-CG 3.42Å; F43-L47 PolarHBondContact O-N 2.83Å
44L93.9Very high89Confident115 Ų11599.5 Ų99.560%0.60250%0.497SS*.Hα-helixtrans-62.8-43.4175.8-171.7160.6000110.7L40 L41 V42 M48L40-L44 WeakPolarHBondContact O-CB 3.26Å; L40-L44 PolarHBondContact O-N 2.99Å; L41-L44 PolarHBondContact O-N 2.63Å; V42-L44 VanDerWaalsContact C-N 3.34Å; L44-M48 WeakPolarHBondContact O-CA 3.35Å; L44-M48 WeakPolarHBondContact O-CB 3.26Å; L44-M48 PolarHBondContact O-N 2.94Å
45V94.2Very high87.6Confident78 Ų78101.3 Ų101.347%0.47351%0.511SS..Hα-helixtrans-66.7-41.3174.9173.10000111.4L41 V42 M48 V49L41-V45 WeakPolarHBondContact O-CG2 3.25Å; L41-V45 PolarHBondContact O-N 3.45Å; V42-V45 PolarHBondContact O-N 3.31Å; V45-M48 PolarHBondContact O-N 3.39Å; V45-V49 WeakPolarHBondContact O-CG2 3.23Å; V45-V49 PolarHBondContact O-N 2.78Å
46M91.3Very high85.9Confident78 Ų78104.9 Ų104.938%0.38452%0.521SS..Hα-helixtrans-63.9-46.7177.2-176.7-81.5-174.200111V42 F43 M48 V49 R50V42-M46 VanDerWaalsContact O-CB 3.28Å; V42-M46 WeakPolarHBondContact O-CB 3.49Å; V42-M46 PolarHBondContact O-N 3.4Å; F43-M46 PolarHBondContact O-N 3.32Å; M46-M48 VanDerWaalsContact C-N 3.34Å; M46-V49 PolarHBondContact O-N 3.02Å; M46-R50 HydrophobicContact CE-CG 3.71Å; M46-R50 VanDerWaalsContact CE-CZ 3.42Å; M46-R50 WeakPolarHBondContact O-CB 3.27Å; M46-R50 VanDerWaalsContact O-CG 3.27Å; M46-R50 WeakPolarHBondContact O-CG 2.91Å; M46-R50 PolarHBondContact O-N 3.43Å; M46-R50 HydrophobicContact SD-CG 3.7Å
47L87.6Confident83.9Confident70 Ų70102.3 Ų102.337%0.36651%0.513SS..Hα-helixtrans-62.3-42.6172.4-76.6-167.5000110.3F43 R50 C51F43-L47 HydrophobicContact CD1-CD1 3.74Å; F43-L47 HydrophobicContact CD1-CG 4.01Å; F43-L47 HydrophobicContact CD2-CG 4.38Å; F43-L47 HydrophobicContact CE1-CD1 3.15Å; F43-L47 HydrophobicContact CE1-CD2 4.35Å; F43-L47 HydrophobicContact CE1-CG 3.68Å; F43-L47 HydrophobicContact CE2-CD1 4.35Å; F43-L47 HydrophobicContact CE2-CD2 4.11Å; F43-L47 HydrophobicContact CE2-CG 4.04Å; F43-L47 HydrophobicContact CG-CG 4.37Å; F43-L47 HydrophobicContact CZ-CD1 3.51Å; F43-L47 HydrophobicContact CZ-CD2 3.86Å; F43-L47 HydrophobicContact CZ-CG 3.68Å; F43-L47 VanDerWaalsContact O-CB 3.26Å; F43-L47 WeakPolarHBondContact O-CB 3.22Å; F43-L47 VanDerWaalsContact O-CG 3.32Å; F43-L47 WeakPolarHBondContact O-CG 3.42Å; F43-L47 PolarHBondContact O-N 2.83Å; L47-R50 CarbonylContact O-C 3.24Å; L47-R50 PolarHBondContact O-N 3.37Å; L47-C51 WeakPolarHBondContact O-CA 3.32Å; L47-C51 WeakPolarHBondContact O-CB 3.48Å; L47-C51 PolarHBondContact O-N 3.15Å; L47-C51 PolarHBondContact O-SG 3.32Å
48M87.4Confident82.1Confident82 Ų82102.9 Ų102.940%0.40452%0.519SS..Hα-helixtrans-60-50.8175.6-177.7-95.5155.600109.7L44 V45 M46 R50 C51 F52L44-M48 WeakPolarHBondContact O-CA 3.35Å; L44-M48 WeakPolarHBondContact O-CB 3.26Å; L44-M48 PolarHBondContact O-N 2.94Å; V45-M48 PolarHBondContact O-N 3.39Å; M46-M48 VanDerWaalsContact C-N 3.34Å; M48-R50 VanDerWaalsContact C-N 3.34Å; M48-R50 PolarHBondContact O-N 3.26Å; M48-C51 PolarHBondContact O-N 3.4Å; M48-F52 HydrophobicContact CE-CB 4.36Å; M48-F52 HydrophobicContact CE-CD1 3.73Å; M48-F52 HydrophobicContact CE-CD2 3.31Å; M48-F52 HydrophobicContact CE-CE1 3.68Å; M48-F52 HydrophobicContact CE-CE2 3.2Å; M48-F52 HydrophobicContact CE-CG 3.53Å; M48-F52 HydrophobicContact CE-CZ 3.39Å; M48-F52 HydrophobicContact CG-CD2 3.64Å; M48-F52 HydrophobicContact CG-CE2 3.46Å; M48-F52 VanDerWaalsContact CG-CE2 3.46Å; M48-F52 HydrophobicContact CG-CZ 4.43Å; M48-F52 WeakPolarHBondContact O-CB 3.29Å; M48-F52 WeakPolarHBondContact O-CD2 3.4Å; M48-F52 WeakPolarHBondContact O-CG 3.04Å; M48-F52 PolarHBondContact O-N 2.63Å; M48-F52 HydrophobicContact SD-CD2 4.07Å; M48-F52 HydrophobicContact SD-CE2 4.12Å
49V88.5Confident79.9Confident73 Ų73108.7 Ų108.744%0.44254%0.536SS..Hα-helixtrans-59.9-41175.2173.70000112.2V45 M46 R53V45-V49 WeakPolarHBondContact O-CG2 3.23Å; V45-V49 PolarHBondContact O-N 2.78Å; M46-V49 PolarHBondContact O-N 3.02Å; V49-R53 HydrophobicContact CG1-CG 4.13Å; V49-R53 WeakPolarHBondContact O-CA 3.35Å; V49-R53 WeakPolarHBondContact O-CB 3.11Å; V49-R53 WeakPolarHBondContact O-CG 3.31Å; V49-R53 PolarHBondContact O-N 3.14Å
50R84.6Confident77.6Confident143 Ų143106.4 Ų106.454%0.5454%0.536SS..Hα-helixtrans-71.5-45.2179-73.9-68.3-17989.10.2112.4M46 L47 M48 F52 R53 I54M46-R50 HydrophobicContact CE-CG 3.71Å; M46-R50 VanDerWaalsContact CE-CZ 3.42Å; M46-R50 WeakPolarHBondContact O-CB 3.27Å; M46-R50 VanDerWaalsContact O-CG 3.27Å; M46-R50 WeakPolarHBondContact O-CG 2.91Å; M46-R50 PolarHBondContact O-N 3.43Å; M46-R50 HydrophobicContact SD-CG 3.7Å; L47-R50 CarbonylContact O-C 3.24Å; L47-R50 PolarHBondContact O-N 3.37Å; M48-R50 VanDerWaalsContact C-N 3.34Å; M48-R50 PolarHBondContact O-N 3.26Å; R50-F52 VanDerWaalsContact C-N 3.35Å; R50-R53 CarbonylContact O-C 3.48Å; R50-R53 VanDerWaalsContact O-C 3.24Å; R50-R53 WeakPolarHBondContact O-CA 3.31Å; R50-R53 PolarHBondContact O-N 3.24Å; R50-R53 VanDerWaalsContact O-N 3.15Å; R50-I54 HydrophobicContact CB-CD1 4.5Å; R50-I54 VanDerWaalsContact O-CB 3.26Å; R50-I54 WeakPolarHBondContact O-CB 3.35Å; R50-I54 WeakPolarHBondContact O-CD1 3.29Å; R50-I54 WeakPolarHBondContact O-CG1 3.47Å; R50-I54 PolarHBondContact O-N 3.43Å
51C75.6Confident75.2Confident62 Ų62112.5 Ų112.542%0.41955%0.553SS.*Hα-helixtrans-57.3-51.4173.6-72.20000108.6L47 M48 R53 I54 L55L47-C51 WeakPolarHBondContact O-CA 3.32Å; L47-C51 WeakPolarHBondContact O-CB 3.48Å; L47-C51 PolarHBondContact O-N 3.15Å; L47-C51 PolarHBondContact O-SG 3.32Å; M48-C51 PolarHBondContact O-N 3.4Å; C51-R53 PolarHBondContact O-N 2.9Å; C51-I54 CarbonylContact O-C 3.27Å; C51-I54 PolarHBondContact O-N 3.4Å; C51-L55 VanDerWaalsContact O-CB 3.27Å; C51-L55 WeakPolarHBondContact O-CB 3.01Å; C51-L55 PolarHBondContact O-N 3.46Å
52F74.8Confident72.6Confident100 Ų100115.8 Ų115.844%0.43957%0.568SS.*Hα-helixtrans-64.7-37174.9-79.5-106.4000111.6M48 R50 I54 L55 L56M48-F52 HydrophobicContact CE-CB 4.36Å; M48-F52 HydrophobicContact CE-CD1 3.73Å; M48-F52 HydrophobicContact CE-CD2 3.31Å; M48-F52 HydrophobicContact CE-CE1 3.68Å; M48-F52 HydrophobicContact CE-CE2 3.2Å; M48-F52 HydrophobicContact CE-CG 3.53Å; M48-F52 HydrophobicContact CE-CZ 3.39Å; M48-F52 HydrophobicContact CG-CD2 3.64Å; M48-F52 HydrophobicContact CG-CE2 3.46Å; M48-F52 VanDerWaalsContact CG-CE2 3.46Å; M48-F52 HydrophobicContact CG-CZ 4.43Å; M48-F52 WeakPolarHBondContact O-CB 3.29Å; M48-F52 WeakPolarHBondContact O-CD2 3.4Å; M48-F52 WeakPolarHBondContact O-CG 3.04Å; M48-F52 PolarHBondContact O-N 2.63Å; M48-F52 HydrophobicContact SD-CD2 4.07Å; M48-F52 HydrophobicContact SD-CE2 4.12Å; R50-F52 VanDerWaalsContact C-N 3.35Å; F52-I54 PolarHBondContact O-N 3.06Å; F52-L55 PolarHBondContact O-N 3.37Å; F52-L56 HydrophobicContact CB-CD1 4.03Å; F52-L56 HydrophobicContact CD1-CD1 3.69Å; F52-L56 HydrophobicContact CG-CD1 4.36Å; F52-L56 VanDerWaalsContact O-CA 3.24Å; F52-L56 WeakPolarHBondContact O-CA 3.11Å; F52-L56 WeakPolarHBondContact O-CB 3.24Å; F52-L56 PolarHBondContact O-N 2.95Å
53R74.3Confident70.2Confident188 Ų188117.1 Ų117.171%0.70958%0.578SS**Hα-helixtrans-75.2-0.4171.1-75.1-78.7-166.1142.13114.4V49 R50 C51 D57V49-R53 HydrophobicContact CG1-CG 4.13Å; V49-R53 WeakPolarHBondContact O-CA 3.35Å; V49-R53 WeakPolarHBondContact O-CB 3.11Å; V49-R53 WeakPolarHBondContact O-CG 3.31Å; V49-R53 PolarHBondContact O-N 3.14Å; R50-R53 CarbonylContact O-C 3.48Å; R50-R53 VanDerWaalsContact O-C 3.24Å; R50-R53 WeakPolarHBondContact O-CA 3.31Å; R50-R53 PolarHBondContact O-N 3.24Å; R50-R53 VanDerWaalsContact O-N 3.15Å; C51-R53 PolarHBondContact O-N 2.9Å; R53-D57 WeakPolarHBondContact O-CB 3.16Å
54I64.4Low67.9Low127 Ų127116.9 Ų116.965%0.65160%0.595SS**Hα-helixtrans-113.7-21.2173.3-70.5161.9000109.5R50 C51 F52 D57R50-I54 HydrophobicContact CB-CD1 4.5Å; R50-I54 VanDerWaalsContact O-CB 3.26Å; R50-I54 WeakPolarHBondContact O-CB 3.35Å; R50-I54 WeakPolarHBondContact O-CD1 3.29Å; R50-I54 WeakPolarHBondContact O-CG1 3.47Å; R50-I54 PolarHBondContact O-N 3.43Å; C51-I54 CarbonylContact O-C 3.27Å; C51-I54 PolarHBondContact O-N 3.4Å; F52-I54 PolarHBondContact O-N 3.06Å; I54-D57 CarbonylContact C-O 3.58Å; I54-D57 VanDerWaalsContact C-O 3.27Å
55L62.9Low65.8Low142 Ų142115.8 Ų115.874%0.74360%0.597SS**Hα-helixtrans-94.4-46.3175.5-118.4115.4000112C51 F52 P58C51-L55 VanDerWaalsContact O-CB 3.27Å; C51-L55 WeakPolarHBondContact O-CB 3.01Å; C51-L55 PolarHBondContact O-N 3.46Å; F52-L55 PolarHBondContact O-N 3.37Å; L55-P58 WeakPolarHBondContact O-CB 3.25Å
56L55.8Low63.7Low132 Ų132116.8 Ų116.869%0.69161%0.607SS**SBendtrans-86.6-13.4171.6-65.1156.5000112.5F52 P58F52-L56 HydrophobicContact CB-CD1 4.03Å; F52-L56 HydrophobicContact CD1-CD1 3.69Å; F52-L56 HydrophobicContact CG-CD1 4.36Å; F52-L56 VanDerWaalsContact O-CA 3.24Å; F52-L56 WeakPolarHBondContact O-CA 3.11Å; F52-L56 WeakPolarHBondContact O-CB 3.24Å; F52-L56 PolarHBondContact O-N 2.95Å; L56-P58 VanDerWaalsContact C-CD 3.41Å; L56-P58 WeakPolarHBondContact O-CD 3.07Å; L56-P58 WeakPolarHBondContact O-CG 3.47Å
57D54.8Low61.8Low72 Ų72124.3 Ų124.339%0.38563%0.632SS.*SBendtrans-84.392.7148.2-170.294000104.9R53 I54R53-D57 WeakPolarHBondContact O-CB 3.16Å; I54-D57 CarbonylContact C-O 3.58Å; I54-D57 VanDerWaalsContact C-O 3.27Å
58P57.1Low60Low93 Ų93125.1 Ų125.160%0.60464%0.639SS**  trans-97.5-3.3-160.9516.1000111.9L55 L56L55-P58 WeakPolarHBondContact O-CB 3.25Å; L56-P58 VanDerWaalsContact C-CD 3.41Å; L56-P58 WeakPolarHBondContact O-CD 3.07Å; L56-P58 WeakPolarHBondContact O-CG 3.47Å
59Y50.7Low58.3Low222 Ų222126 Ų12687%0.87165%0.646SS**SBendtrans-171.7-12.9-133.4-138.2-111.7000114.7
60S48.3Very low56.6Low81 Ų81131 Ų13157%0.56666%0.664SS**SBendtrans-87.5-35.2-171.6174.20000111.9
61R45.6Very low55.1Low204 Ų204131.8 Ų131.877%0.7767%0.672SS**SBendtrans-135.3-23.4-167.8-66.5-163.1-173.4-167.42.8121.4
62M42.1Very low54Low181 Ų181133.2 Ų133.289%0.89267%0.672SS**  trans-161.2141.3173.8-105.3112.5-150.700115.4
63P46.1Very low53Low117 Ų117131.1 Ų131.176%0.7668%0.679SS**  trans-67.2139.2176.531.3-33.2000109.5S65P63-S65 PolarHBondContact O-N 3.3Å
64A46.8Very low52.1Low94 Ų94127.5 Ų127.578%0.77767%0.673SS**SBendtrans-57.2128.5176.400000110.7
65S49.7Very low51.5Low92 Ų92127 Ų12764%0.64367%0.668SS**  trans63.5109.6171.669.90000116.9P63 W67P63-S65 PolarHBondContact O-N 3.3Å; S65-W67 PolarHBondContact O-N 2.81Å
66S49.2Very low51.2Low100 Ų100129.6 Ų129.670%0.69967%0.668SS**THydrogen-bonded Turntrans-70.842.9164.480.90000112.3
67W50.8Low51.2Low235 Ų235125.3 Ų125.389%0.8966%0.655SS**THydrogen-bonded Turntrans-83.1-2.6167.2-165.770.1000111.9S65S65-W67 PolarHBondContact O-N 2.81Å
68T50.5Low51.3Low87 Ų87127.9 Ų127.953%0.53467%0.665SS.*SBendtrans-103.4-14.3169.951.30000114H70 K71T68-H70 PolarHBondContact O-N 2.93Å; T68-H70 VanDerWaalsContact O-N 3.14Å; T68-K71 PolarHBondContact O-N 3.21Å
69D50.9Low51.2Low100 Ų100129.4 Ų129.454%0.53566%0.663SS.*Hα-helixtrans-64.2-24.8-174.5-166.2-92.6000113.3K71 E72D69-K71 VanDerWaalsContact C-N 3.33Å; D69-K71 PolarHBondContact O-N 3.08Å; D69-E72 WeakPolarHBondContact CA-OE1 3.25Å; D69-E72 PolarHBondContact N-OE1 2.85Å
70H54Low51.6Low178 Ų178125 Ų12582%0.82465%0.654SS**Hα-helixtrans-79.3-11175.7-1367.1000114.8T68T68-H70 PolarHBondContact O-N 2.93Å; T68-H70 VanDerWaalsContact O-N 3.14Å
71K52.1Low52.1Low161 Ų161130.6 Ų130.670%0.766%0.664SS**Hα-helixtrans-90.5-31.5172.3-79-171.576.977.30112.7T68 D69 E75T68-K71 PolarHBondContact O-N 3.21Å; D69-K71 VanDerWaalsContact C-N 3.33Å; D69-K71 PolarHBondContact O-N 3.08Å; K71-E75 VanDerWaalsContact O-CG 3.23Å; K71-E75 WeakPolarHBondContact O-CG 3.21Å
72E54Low52.8Low91 Ų91125 Ų12543%0.42566%0.662SS.*Hα-helixtrans-85-14.6-174.356.8-146.9149.400115.3D69D69-E72 WeakPolarHBondContact CA-OE1 3.25Å; D69-E72 PolarHBondContact N-OE1 2.85Å
73G53.3Low53.6Low57 Ų57124.1 Ų124.159%0.58866%0.66SS**THydrogen-bonded Turntrans-81.5-26.5169.400000114.7
74L54.8Low53.7Low112 Ų112127.9 Ų127.959%0.58668%0.68SS**THydrogen-bonded Turntrans-75.8-33.1178-16090.6000111.5R76 Q78L74-R76 VanDerWaalsContact C-N 3.32Å; L74-R76 PolarHBondContact O-N 3.05Å; L74-Q78 WeakPolarHBondContact O-CB 3.49Å; L74-Q78 PolarHBondContact O-N 2.84Å
75E53.2Low54.1Low115 Ų115129.6 Ų129.654%0.53768%0.675SS.*THydrogen-bonded Turntrans-85.90.7-174.2-48.6-118.8117.500113.2K71 F79K71-E75 VanDerWaalsContact O-CG 3.23Å; K71-E75 WeakPolarHBondContact O-CG 3.21Å; E75-F79 HydrophobicContact CB-CD2 4.49Å; E75-F79 HydrophobicContact CB-CE2 3.82Å; E75-F79 WeakPolarHBondContact O-CD2 3.47Å; E75-F79 VanDerWaalsContact O-CE2 3.27Å; E75-F79 WeakPolarHBondContact O-CE2 3.32Å
76R55.8Low54.3Low197 Ų197131.5 Ų131.574%0.74368%0.677SS**THydrogen-bonded Turntrans-112.3-7.4174.7-79.8-173169.889.2-1114.3L74L74-R76 VanDerWaalsContact C-N 3.32Å; L74-R76 PolarHBondContact O-N 3.05Å
77G55.7Low54.6Low42 Ų42133.3 Ų133.343%0.43368%0.675SS.*THydrogen-bonded Turntrans-107.4-17.5173.700000114.5Y81G77-Y81 VanDerWaalsContact O-CD2 3.29Å; G77-Y81 WeakPolarHBondContact O-CD2 3.29Å; G77-Y81 WeakPolarHBondContact O-CE2 3.43Å
78Q55.8Low54.8Low127 Ų127127.3 Ų127.359%0.59366%0.663SS**SBendtrans-91.2-24.8-176.5-164179.2-67.500113.6L74 D80L74-Q78 WeakPolarHBondContact O-CB 3.49Å; L74-Q78 PolarHBondContact O-N 2.84Å; Q78-D80 VanDerWaalsContact C-N 3.35Å; Q78-D80 PolarHBondContact O-N 3.46Å
79F56.5Low55.1Low125 Ų125129.8 Ų129.855%0.54867%0.671SS.*G310 helixtrans-78.5-17.4-175.3-71.8-95.6000113.6E75E75-F79 HydrophobicContact CB-CD2 4.49Å; E75-F79 HydrophobicContact CB-CE2 3.82Å; E75-F79 WeakPolarHBondContact O-CD2 3.47Å; E75-F79 VanDerWaalsContact O-CE2 3.27Å; E75-F79 WeakPolarHBondContact O-CE2 3.32Å
80D58.8Low55.4Low129 Ų129131.8 Ų131.869%0.6968%0.68SS**G310 helixtrans-83.7-7.2176.6-75-65.3000114.1Q78Q78-D80 VanDerWaalsContact C-N 3.35Å; Q78-D80 PolarHBondContact O-N 3.46Å
81Y57.6Low55.5Low198 Ų198128.5 Ų128.578%0.77667%0.67SS**G310 helixtrans-104.11.6177.9-66.5-78.2000114.3G77G77-Y81 VanDerWaalsContact O-CD2 3.29Å; G77-Y81 WeakPolarHBondContact O-CD2 3.29Å; G77-Y81 WeakPolarHBondContact O-CE2 3.43Å
82A61Low55.7Low87 Ų87126 Ų12672%0.71967%0.667SS**SBendtrans-103.71.6177.200000113.6
83L58.7Low55.9Low163 Ų163128.9 Ų128.985%0.85369%0.688SS**  trans-120.634.7-176.2-91.3174.1000113.7
84V49.1Very low56.1Low195 Ų195135.5 Ų135.5100%1.18270%0.697SS**  trans-143.40163.969.50000111.7

Retrieved 84 of 84 residues in 119.1 ms (Link to these results)