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Ragulator complex protein LAMTOR4

As part of the Ragulator complex it is involved in amino acid sensing and activation of mTORC1, a signaling complex promoting cell growth in response to growth factors, energy levels, and amino acids. Activated by amino acids through a mechanism involving the lysosomal V-ATPase, the Ragulator plays a dual role for the small GTPases Rag (RagA/RRAGA, RagB/RRAGB, RagC/RRAGC and/or RagD/RRAGD): it (1) acts as a guanine nucleotide exchange factor (GEF), activating the small GTPases Rag and (2) mediates recruitment of Rag GTPases to the lysosome membrane. Activated Ragulator and Rag GTPases function as a scaffold recruiting mTORC1 to lysosomes where it is in turn activated.

AlphaFold DB (G7P0C8), UniProt , Accession A0A096MQ77, Species PAPAN (Papio anubis, Olive baboon), Gene LAMTOR4, Length 99 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M42.8Very low78.8Confident246 Ų24692.7 Ų92.7100%1.21250%0.5SS*.  0111.70-74.9-162.8-10800107.7
2T51.4Low80Confident86 Ų8689.1 Ų89.153%0.52848%0.479SS..  trans-73.6126.2173.4340000109
3S75.2Confident81Confident56 Ų5688.9 Ų88.939%0.39249%0.486SS..  trans-73.3153.5178.974.60000110.4L5 T6 Q7S3-L5 PolarHBondContact O-N 3.27Å; S3-T6 PolarHBondContact N-OG1 2.99Å; S3-T6 PolarHBondContact O-N 2.75Å; S3-T6 PolarHBondContact O-OG1 2.89Å; S3-T6 PolarHBondContact OG-N 3.08Å; S3-T6 PolarHBondContact OG-OG1 2.88Å; S3-Q7 PolarHBondContact O-N 3.13Å
4A75.5Confident81.8Confident82 Ų8285.8 Ų85.868%0.67847%0.468SS*.Hα-helixtrans-55.6-26.3176.300000113.1G8A4-G8 PolarHBondContact O-N 3.41Å
5L79.9Confident82.7Confident84 Ų8483.1 Ų83.144%0.4445%0.451SS..Hα-helixtrans-68.9-42177.5-66.8159.2000112.1S3 G8S3-L5 PolarHBondContact O-N 3.27Å; L5-G8 PolarHBondContact O-N 3.44Å
6T85.4Confident83.6Confident8 Ų881.2 Ų81.25%0.04944%0.44CS..Hα-helixtrans-75.4-32.7-179.755.30000111.6S3 G8 L9 E10 Y18 A28S3-T6 PolarHBondContact N-OG1 2.99Å; S3-T6 PolarHBondContact O-N 2.75Å; S3-T6 PolarHBondContact O-OG1 2.89Å; S3-T6 PolarHBondContact OG-N 3.08Å; S3-T6 PolarHBondContact OG-OG1 2.88Å; T6-G8 PolarHBondContact O-N 3.14Å; T6-L9 PolarHBondContact O-N 3.37Å; T6-L9 VanDerWaalsContact O-N 3.08Å; T6-E10 WeakPolarHBondContact O-CG 3.11Å; T6-E10 PolarHBondContact O-N 3.1Å; T6-Y18 WeakPolarHBondContact CB-OH 3.42Å; T6-Y18 HydrophobicContact CG2-CE2 3.92Å; T6-A28 HydrophobicContact CG2-CB 3.61Å
7Q86.6Confident84.4Confident96 Ų9676.4 Ų76.445%0.44941%0.414SS..Hα-helixtrans-59.5-35172.3-69.9-179.7-3.400112.7S3 L9 R11S3-Q7 PolarHBondContact O-N 3.13Å; Q7-L9 VanDerWaalsContact C-N 3.33Å; Q7-R11 VanDerWaalsContact O-CG 3.25Å; Q7-R11 WeakPolarHBondContact O-CG 3.28Å; Q7-R11 PolarHBondContact O-N 2.94Å
8G91.3Very high85.1Confident43 Ų4372.7 Ų72.744%0.44339%0.393SS..Hα-helixtrans-65.1-36.9175.500000112.8A4 L5 T6A4-G8 PolarHBondContact O-N 3.41Å; L5-G8 PolarHBondContact O-N 3.44Å; T6-G8 PolarHBondContact O-N 3.14Å
9L93.5Very high85.7Confident18 Ų1868.9 Ų68.99%0.09437%0.373CS..Hα-helixtrans-74.5-38.4-179.4-57.6175.5000111.9T6 Q7 R11 I12 Y18 V20 F85 V87T6-L9 PolarHBondContact O-N 3.37Å; T6-L9 VanDerWaalsContact O-N 3.08Å; Q7-L9 VanDerWaalsContact C-N 3.33Å; L9-R11 PolarHBondContact O-N 3.31Å; L9-I12 HydrophobicContact CD2-CD1 4.11Å; L9-I12 WeakPolarHBondContact O-CB 3.27Å; L9-I12 WeakPolarHBondContact O-CG1 3.29Å; L9-I12 PolarHBondContact O-N 2.89Å; L9-Y18 HydrophobicContact CB-CD1 3.92Å; L9-Y18 HydrophobicContact CB-CD2 4.32Å; L9-Y18 HydrophobicContact CB-CE1 4.43Å; L9-Y18 HydrophobicContact CB-CG 3.86Å; L9-Y18 HydrophobicContact CD1-CD2 3.65Å; L9-Y18 HydrophobicContact CD1-CE2 4.27Å; L9-Y18 HydrophobicContact CD1-CG 3.91Å; L9-V20 HydrophobicContact CD1-CG2 3.58Å; L9-F85 HydrophobicContact CD1-CD1 4.34Å; L9-V87 HydrophobicContact CD2-CG2 3.83Å
10E92.2Very high86.2Confident85 Ų8565.9 Ų65.940%0.39736%0.357SS..Hα-helixtrans-65-25.3176.5-72.3171.6-167.500113T6 I12 Y18T6-E10 WeakPolarHBondContact O-CG 3.11Å; T6-E10 PolarHBondContact O-N 3.1Å; E10-I12 VanDerWaalsContact C-N 3.28Å; E10-I12 PolarHBondContact O-N 3.36Å; E10-Y18 HydrophobicContact CG-CD1 4.35Å; E10-Y18 HydrophobicContact CG-CE1 3.48Å; E10-Y18 VanDerWaalsContact CG-CE1 3.48Å; E10-Y18 PolarHBondContact OE1-OH 2.95Å
11R93.4Very high86.6Confident216 Ų21662.8 Ų62.882%0.81534%0.34SS*.THydrogen-bonded Turntrans-85-0.2179.2-69176.772.2179.64113.5Q7 L9 P13Q7-R11 VanDerWaalsContact O-CG 3.25Å; Q7-R11 WeakPolarHBondContact O-CG 3.28Å; Q7-R11 PolarHBondContact O-N 2.94Å; L9-R11 PolarHBondContact O-N 3.31Å; R11-P13 WeakPolarHBondContact O-CD 3.3Å
12I93.1Very high88.9Confident49 Ų4952.3 Ų52.325%0.25129%0.291SS..SBendtrans-73.4125.5179.5-65.9171.4000108.9L9 E10 D14 Q15 V87 R89L9-I12 HydrophobicContact CD2-CD1 4.11Å; L9-I12 WeakPolarHBondContact O-CB 3.27Å; L9-I12 WeakPolarHBondContact O-CG1 3.29Å; L9-I12 PolarHBondContact O-N 2.89Å; E10-I12 VanDerWaalsContact C-N 3.28Å; E10-I12 PolarHBondContact O-N 3.36Å; I12-D14 PolarHBondContact O-N 3.48Å; I12-Q15 HydrophobicContact CB-CB 4.14Å; I12-Q15 HydrophobicContact CG2-CB 4.37Å; I12-Q15 WeakPolarHBondContact O-CB 3.43Å; I12-Q15 PolarHBondContact O-N 3.43Å; I12-V87 HydrophobicContact CD1-CB 4.46Å; I12-V87 HydrophobicContact CD1-CG1 4.14Å; I12-V87 HydrophobicContact CD1-CG2 3.74Å; I12-V87 HydrophobicContact CG2-CG1 4.37Å; I12-R89 HydrophobicContact CG2-CG 4.3Å
13P92.6Very high90.5Very high87 Ų8756.7 Ų56.757%0.56531%0.305SS*.THydrogen-bonded Turntrans-58.6140.4177.7-24.333.8000111.9R11 Q15 R89R11-P13 WeakPolarHBondContact O-CD 3.3Å; P13-Q15 PolarHBondContact O-N 3.48Å; P13-R89 PolarHBondContact O-NE 2.83Å; P13-R89 PolarHBondContact O-NH2 3.02Å
14D92.7Very high90.6Very high45 Ų4556.5 Ų56.524%0.24131%0.312CS..THydrogen-bonded Turntrans59.921.1179.1-47.1-60000114.4I12 L16 R89 Q90 R92I12-D14 PolarHBondContact O-N 3.48Å; D14-L16 PolarHBondContact O-N 2.88Å; D14-R89 VanDerWaalsContact O-CA 3.25Å; D14-R89 WeakPolarHBondContact O-CA 3.42Å; D14-R89 IonicContact OD2-NH2 3.59Å; D14-Q90 HydrophobicContact CB-CB 4.26Å; D14-Q90 PolarHBondContact O-N 2.89Å; D14-R92 IonicContact OD1-CZ 2.7Å; D14-R92 IonicContact OD1-NE 2.83Å; D14-R92 PolarHBondContact OD1-NE 2.99Å; D14-R92 IonicContact OD1-NH2 3.06Å; D14-R92 PolarHBondContact OD1-NH2 2.93Å; D14-R92 WeakPolarHBondContact OD2-CD 3.25Å; D14-R92 IonicContact OD2-CZ 2.68Å; D14-R92 IonicContact OD2-NE 3.05Å; D14-R92 PolarHBondContact OD2-NE 3.09Å; D14-R92 IonicContact OD2-NH2 3.55Å
15Q94.8Very high91.2Very high45 Ų4555.3 Ų55.321%0.2130%0.302CS..EExtended strand (participates in β ladder)trans-68.8129.4172.5171.7-89.7-37.100109.9I12 P13 G17 V87 K88I12-Q15 HydrophobicContact CB-CB 4.14Å; I12-Q15 HydrophobicContact CG2-CB 4.37Å; I12-Q15 WeakPolarHBondContact O-CB 3.43Å; I12-Q15 PolarHBondContact O-N 3.43Å; P13-Q15 PolarHBondContact O-N 3.48Å; Q15-G17 VanDerWaalsContact NE2-C 3.34Å; Q15-V87 HydrophobicContact CB-CG1 4.12Å; Q15-V87 HydrophobicContact CG-CG1 3.76Å; Q15-K88 WeakPolarHBondContact CA-O 3.26Å
16L96.7Very high91.8Very high53 Ų5353.7 Ų53.728%0.27730%0.296SS..EExtended strand (participates in β ladder)trans-107-25.7178-57.7176.9000111.7D14 G31 D32 H73 K88 Q90D14-L16 PolarHBondContact O-N 2.88Å; L16-G31 WeakPolarHBondContact O-CA 3.45Å; L16-D32 PolarHBondContact O-N 3.43Å; L16-H73 HydrophobicContact CD1-CB 4.44Å; L16-K88 HydrophobicContact CB-CB 4.43Å; L16-K88 HydrophobicContact CB-CD 4.16Å; L16-K88 HydrophobicContact CB-CG 4.2Å; L16-K88 HydrophobicContact CD1-CD 4.43Å; L16-K88 HydrophobicContact CD1-CG 4.36Å; L16-K88 PolarHBondContact N-O 3.21Å; L16-Q90 HydrophobicContact CD1-CB 4.09Å; L16-Q90 HydrophobicContact CD2-CB 4.43Å; L16-Q90 HydrophobicContact CG-CB 4.37Å
17G97.1Very high92.1Very high0 Ų058 Ų580%032%0.318CS..EExtended strand (participates in β ladder)trans-168.2157.1177.600000110.8Q15 S30 K88Q15-G17 VanDerWaalsContact NE2-C 3.34Å; G17-S30 CarbonylContact C-O 3.54Å; G17-S30 WeakPolarHBondContact CA-O 3.35Å; G17-K88 PolarHBondContact O-N 3.39Å
18Y97.4Very high92.5Very high10 Ų1054.6 Ų54.64%0.03931%0.306CS..EExtended strand (participates in β ladder)trans-140.1159.1170.668.4-100.7000110.8T6 L9 E10 V20 A28 S29 S30 V86T6-Y18 WeakPolarHBondContact CB-OH 3.42Å; T6-Y18 HydrophobicContact CG2-CE2 3.92Å; L9-Y18 HydrophobicContact CB-CD1 3.92Å; L9-Y18 HydrophobicContact CB-CD2 4.32Å; L9-Y18 HydrophobicContact CB-CE1 4.43Å; L9-Y18 HydrophobicContact CB-CG 3.86Å; L9-Y18 HydrophobicContact CD1-CD2 3.65Å; L9-Y18 HydrophobicContact CD1-CE2 4.27Å; L9-Y18 HydrophobicContact CD1-CG 3.91Å; E10-Y18 HydrophobicContact CG-CD1 4.35Å; E10-Y18 HydrophobicContact CG-CE1 3.48Å; E10-Y18 VanDerWaalsContact CG-CE1 3.48Å; E10-Y18 PolarHBondContact OE1-OH 2.95Å; Y18-V20 HydrophobicContact CD2-CG2 4.42Å; Y18-A28 HydrophobicContact CE2-CB 4.35Å; Y18-S29 CarbonylContact O-C 3.57Å; Y18-S29 VanDerWaalsContact O-CA 3.27Å; Y18-S29 WeakPolarHBondContact O-CA 3.43Å; Y18-S30 VanDerWaalsContact CZ-CB 3.44Å; Y18-S30 PolarHBondContact N-O 2.81Å; Y18-S30 PolarHBondContact O-N 3.47Å; Y18-V86 CarbonylContact C-O 3.53Å; Y18-V86 WeakPolarHBondContact CA-O 3.47Å; Y18-V86 WeakPolarHBondContact CB-O 3.09Å
19L96.4Very high92.7Very high1 Ų153.7 Ų53.71%0.00529%0.293CS..EExtended strand (participates in β ladder)trans-148132.3179.7178126.5000108.9L21 V26 A28 L33 A40 V86L19-L21 HydrophobicContact CD1-CD2 4.41Å; L19-L21 HydrophobicContact CD2-CD1 3.68Å; L19-L21 HydrophobicContact CD2-CD2 3.47Å; L19-L21 VanDerWaalsContact CD2-CD2 3.47Å; L19-L21 HydrophobicContact CD2-CG 3.47Å; L19-L21 VanDerWaalsContact CD2-CG 3.47Å; L19-L21 HydrophobicContact CG-CD2 3.87Å; L19-L21 HydrophobicContact CG-CG 4.28Å; L19-V26 HydrophobicContact CD1-CG1 4.35Å; L19-V26 HydrophobicContact CD1-CG2 4.24Å; L19-A28 CarbonylContact C-O 3.59Å; L19-A28 WeakPolarHBondContact CA-O 3.35Å; L19-L33 HydrophobicContact CB-CB 4.2Å; L19-L33 HydrophobicContact CB-CD1 4.16Å; L19-A40 HydrophobicContact CD1-CB 4.12Å; L19-A40 HydrophobicContact CD2-CB 4.14Å; L19-V86 HydrophobicContact CB-CB 4.12Å; L19-V86 HydrophobicContact CD2-CB 4.3Å; L19-V86 HydrophobicContact CD2-CG2 3.89Å; L19-V86 PolarHBondContact N-O 3.43Å; L19-V86 WeakPolarHBondContact O-CB 3.45Å; L19-V86 PolarHBondContact O-N 3.3Å
20V95.7Very high92.8Very high8 Ų854.5 Ų54.55%0.04830%0.301CS..EExtended strand (participates in β ladder)trans-119.7121179.2-1760000107.8L9 Y18 L27 A28 V84 F85L9-V20 HydrophobicContact CD1-CG2 3.58Å; Y18-V20 HydrophobicContact CD2-CG2 4.42Å; V20-L27 HydrophobicContact CG1-CB 4.42Å; V20-L27 PolarHBondContact O-N 2.82Å; V20-A28 HydrophobicContact CB-CB 4.23Å; V20-A28 HydrophobicContact CG2-CB 4.3Å; V20-A28 PolarHBondContact N-O 2.82Å; V20-A28 PolarHBondContact O-N 3.17Å; V20-V84 WeakPolarHBondContact CA-O 3.38Å; V20-F85 HydrophobicContact CG1-CD1 4.27Å; V20-F85 HydrophobicContact CG1-CE1 4.06Å; V20-F85 HydrophobicContact CG2-CD1 4.11Å; V20-F85 HydrophobicContact CG2-CE1 4.39Å
21L94.2Very high93Very high1 Ų152.2 Ų52.21%0.00530%0.3CS..EExtended strand (participates in β ladder)trans-114149.5-179.1-51.3177.9000111.4L19 A25 V26 A40 S44 R83 V84L19-L21 HydrophobicContact CD1-CD2 4.41Å; L19-L21 HydrophobicContact CD2-CD1 3.68Å; L19-L21 HydrophobicContact CD2-CD2 3.47Å; L19-L21 VanDerWaalsContact CD2-CD2 3.47Å; L19-L21 HydrophobicContact CD2-CG 3.47Å; L19-L21 VanDerWaalsContact CD2-CG 3.47Å; L19-L21 HydrophobicContact CG-CD2 3.87Å; L19-L21 HydrophobicContact CG-CG 4.28Å; L21-A25 VanDerWaalsContact CA-O 3.26Å; L21-A25 WeakPolarHBondContact CA-O 3.3Å; L21-V26 HydrophobicContact CD2-CB 4.16Å; L21-V26 HydrophobicContact CD2-CG2 3.68Å; L21-A40 HydrophobicContact CD1-CB 4.07Å; L21-A40 WeakPolarHBondContact CD1-O 3.35Å; L21-A40 HydrophobicContact CD2-CB 3.74Å; L21-S44 VanDerWaalsContact CD1-OG 3.29Å; L21-S44 WeakPolarHBondContact CD1-OG 3.43Å; L21-R83 CarbonylContact O-C 3.52Å; L21-R83 VanDerWaalsContact O-CA 3.25Å; L21-R83 WeakPolarHBondContact O-CA 3.47Å; L21-V84 HydrophobicContact CB-CB 4.15Å; L21-V84 PolarHBondContact N-O 3.36Å; L21-V84 PolarHBondContact O-N 3.32Å
22S91.9Very high93.2Very high25 Ų2546.3 Ų46.318%0.17528%0.284CS..EExtended strand (participates in β ladder)trans-142128.3166.8-171.20000108.2G24 A25S22-G24 PolarHBondContact O-N 2.97Å; S22-G24 VanDerWaalsContact O-N 3.11Å; S22-A25 PolarHBondContact N-O 3.42Å; S22-A25 PolarHBondContact O-N 2.89Å
23E85.8Confident93.3Very high178 Ų17844.4 Ų44.483%0.83228%0.275SS*.THydrogen-bonded Turntrans52.634.3179-54.1-172.6126.200113.8A25E23-A25 VanDerWaalsContact C-N 3.27Å; E23-A25 PolarHBondContact O-N 3.48Å
24G75.9Confident93.5Very high53 Ų5346 Ų4655%0.54628%0.275SS..THydrogen-bonded Turntrans80.8-4.4-17900000115.2S22S22-G24 PolarHBondContact O-N 2.97Å; S22-G24 VanDerWaalsContact O-N 3.11Å
25A88.1Confident93.5Very high56 Ų5649.7 Ų49.746%0.46329%0.294SS..EExtended strand (participates in β ladder)trans-97.4145.5176.500000112.3L21 S22 E23 L27L21-A25 VanDerWaalsContact CA-O 3.26Å; L21-A25 WeakPolarHBondContact CA-O 3.3Å; S22-A25 PolarHBondContact N-O 3.42Å; S22-A25 PolarHBondContact O-N 2.89Å; E23-A25 VanDerWaalsContact C-N 3.27Å; E23-A25 PolarHBondContact O-N 3.48Å; A25-L27 PolarHBondContact O-N 3.34Å
26V92.5Very high93.4Very high50 Ų5050.2 Ų50.230%0.30330%0.299SS..EExtended strand (participates in β ladder)trans-76.2116.1175-176.60000109.8L19 L21 A40L19-V26 HydrophobicContact CD1-CG1 4.35Å; L19-V26 HydrophobicContact CD1-CG2 4.24Å; L21-V26 HydrophobicContact CD2-CB 4.16Å; L21-V26 HydrophobicContact CD2-CG2 3.68Å; V26-A40 HydrophobicContact CG2-CB 3.77Å
27L92.6Very high93.2Very high98 Ų9854.9 Ų54.951%0.51332%0.319SS..EExtended strand (participates in β ladder)trans-90.2-36.5175-65.6-173.1000112.6V20 A25V20-L27 HydrophobicContact CG1-CB 4.42Å; V20-L27 PolarHBondContact O-N 2.82Å; A25-L27 PolarHBondContact O-N 3.34Å
28A94.4Very high93Very high25 Ų2562.7 Ų62.721%0.20736%0.356CS..EExtended strand (participates in β ladder)trans-154.4144.5177.500000109.5T6 Y18 L19 V20T6-A28 HydrophobicContact CG2-CB 3.61Å; Y18-A28 HydrophobicContact CE2-CB 4.35Å; L19-A28 CarbonylContact C-O 3.59Å; L19-A28 WeakPolarHBondContact CA-O 3.35Å; V20-A28 HydrophobicContact CB-CB 4.23Å; V20-A28 HydrophobicContact CG2-CB 4.3Å; V20-A28 PolarHBondContact N-O 2.82Å; V20-A28 PolarHBondContact O-N 3.17Å
29S95.2Very high92.8Very high24 Ų2463.2 Ų63.217%0.16836%0.362CS..EExtended strand (participates in β ladder)trans-149.1157.8175.263.80000110.4Y18 L33 N35Y18-S29 CarbonylContact O-C 3.57Å; Y18-S29 VanDerWaalsContact O-CA 3.27Å; Y18-S29 WeakPolarHBondContact O-CA 3.43Å; S29-L33 WeakPolarHBondContact CB-O 3.48Å; S29-N35 PolarHBondContact OG-N 3.15Å
30S96.5Very high92.7Very high36 Ų3663.3 Ų63.325%0.25236%0.362SS..EExtended strand (participates in β ladder)trans-163.1159.6177.9-170.40000111.6G17 Y18 L33G17-S30 CarbonylContact C-O 3.54Å; G17-S30 WeakPolarHBondContact CA-O 3.35Å; Y18-S30 VanDerWaalsContact CZ-CB 3.44Å; Y18-S30 PolarHBondContact N-O 2.81Å; Y18-S30 PolarHBondContact O-N 3.47Å; S30-L33 PolarHBondContact O-N 3.49Å
31G96.3Very high92.7Very high37 Ų3766.6 Ų66.638%0.38139%0.386SS..EExtended strand (participates in β ladder)trans63.6-139176.700000111.6L16 L33 E34L16-G31 WeakPolarHBondContact O-CA 3.45Å; G31-L33 PolarHBondContact O-N 3.02Å; G31-E34 VanDerWaalsContact O-CB 3.25Å; G31-E34 WeakPolarHBondContact O-CB 3.39Å; G31-E34 PolarHBondContact O-N 2.98Å
32D96.8Very high92.7Very high91 Ų9169.1 Ų69.149%0.48741%0.407SS..THydrogen-bonded Turntrans-60.7-13.4-179-73.73.3000114.9L16 K88L16-D32 PolarHBondContact O-N 3.43Å; D32-K88 HydrophobicContact CB-CD 3.76Å; D32-K88 WeakPolarHBondContact OD2-CE 3.45Å; D32-K88 IonicContact OD2-NZ 3.85Å; D32-K88 PolarHBondContact OD2-NZ 3.03Å
33L95.9Very high92.9Very high9 Ų968.4 Ų68.45%0.04740%0.401CS..THydrogen-bonded Turntrans-108.89.1179.3-61.9178.3000112.3L19 S29 S30 G31 N35 D36 A39 L75 V86 K88L19-L33 HydrophobicContact CB-CB 4.2Å; L19-L33 HydrophobicContact CB-CD1 4.16Å; S29-L33 WeakPolarHBondContact CB-O 3.48Å; S30-L33 PolarHBondContact O-N 3.49Å; G31-L33 PolarHBondContact O-N 3.02Å; L33-N35 PolarHBondContact O-N 3.35Å; L33-D36 PolarHBondContact O-N 3.01Å; L33-A39 HydrophobicContact CD2-CB 4.42Å; L33-L75 HydrophobicContact CD1-CD2 4.36Å; L33-V86 HydrophobicContact CD1-CG1 3.88Å; L33-K88 HydrophobicContact CD1-CB 4.08Å; L33-K88 HydrophobicContact CG-CB 4.36Å
34E96.4Very high93.2Very high121 Ų12161.4 Ų61.457%0.56537%0.372SS*.THydrogen-bonded Turntrans-63.1121.6-179.4-173.3173-172.600111.2G31 D36G31-E34 VanDerWaalsContact O-CB 3.25Å; G31-E34 WeakPolarHBondContact O-CB 3.39Å; G31-E34 PolarHBondContact O-N 2.98Å; E34-D36 PolarHBondContact O-N 2.66Å; E34-D36 VanDerWaalsContact O-N 3.09Å
35N92.1Very high94.1Very high123 Ų12365.4 Ų65.466%0.65838%0.376SS*.THydrogen-bonded Turntrans54.522.6-177.9-55-50.3000114.9S29 L33 E37S29-N35 PolarHBondContact OG-N 3.15Å; L33-N35 PolarHBondContact O-N 3.35Å; N35-E37 PolarHBondContact O-N 2.89Å
36D93.9Very high94.3Very high56 Ų5666.1 Ų66.130%0.29937%0.372SS..  trans-81.780.9176.9-168.3-16.1000111L33 E34 Q38 A39 A40L33-D36 PolarHBondContact O-N 3.01Å; E34-D36 PolarHBondContact O-N 2.66Å; E34-D36 VanDerWaalsContact O-N 3.09Å; D36-Q38 PolarHBondContact O-N 2.85Å; D36-Q38 PolarHBondContact OD1-N 2.88Å; D36-A39 HydrophobicContact CB-CB 4.08Å; D36-A39 PolarHBondContact O-N 2.92Å; D36-A39 WeakPolarHBondContact OD1-CB 3.37Å; D36-A39 PolarHBondContact OD1-N 2.85Å; D36-A39 WeakPolarHBondContact OD2-CB 3.35Å; D36-A40 PolarHBondContact O-N 2.94Å
37E92.1Very high94.3Very high151 Ų15164.2 Ų64.271%0.70636%0.36SS*.Hα-helixtrans-65.1-27.8177.9-65.5-171.5166.300112.7N35 A40 S41N35-E37 PolarHBondContact O-N 2.89Å; E37-A40 WeakPolarHBondContact O-CB 3.28Å; E37-A40 PolarHBondContact O-N 2.83Å; E37-S41 WeakPolarHBondContact O-CB 3.3Å; E37-S41 PolarHBondContact O-N 2.94Å
38Q93.8Very high94.1Very high164 Ų16463.6 Ų63.677%0.76637%0.365SS*.Hα-helixtrans-68.6-46.6178.3-171178.815.600110.3D36 A40 S41 A42D36-Q38 PolarHBondContact O-N 2.85Å; D36-Q38 PolarHBondContact OD1-N 2.88Å; Q38-A40 VanDerWaalsContact C-N 3.32Å; Q38-A40 PolarHBondContact O-N 2.88Å; Q38-S41 PolarHBondContact O-N 2.99Å; Q38-A42 PolarHBondContact O-N 3.45Å
39A93.3Very high93.9Very high20 Ų2066 Ų6617%0.16538%0.376CS..Hα-helixtrans-62.7-39.8172.900000111.7L33 D36 S41 A42 I43L33-A39 HydrophobicContact CD2-CB 4.42Å; D36-A39 HydrophobicContact CB-CB 4.08Å; D36-A39 PolarHBondContact O-N 2.92Å; D36-A39 WeakPolarHBondContact OD1-CB 3.37Å; D36-A39 PolarHBondContact OD1-N 2.85Å; D36-A39 WeakPolarHBondContact OD2-CB 3.35Å; A39-S41 VanDerWaalsContact C-N 3.35Å; A39-S41 PolarHBondContact O-N 2.91Å; A39-A42 PolarHBondContact O-N 2.95Å; A39-I43 WeakPolarHBondContact O-CB 3.38Å; A39-I43 VanDerWaalsContact O-CG1 3.27Å; A39-I43 WeakPolarHBondContact O-CG1 3.26Å; A39-I43 PolarHBondContact O-N 3.36Å
40A94.2Very high93.6Very high3 Ų366 Ų663%0.02538%0.378CS..Hα-helixtrans-57.3-46.8175.400000112.6L19 L21 V26 D36 E37 Q38 S44L19-A40 HydrophobicContact CD1-CB 4.12Å; L19-A40 HydrophobicContact CD2-CB 4.14Å; L21-A40 HydrophobicContact CD1-CB 4.07Å; L21-A40 WeakPolarHBondContact CD1-O 3.35Å; L21-A40 HydrophobicContact CD2-CB 3.74Å; V26-A40 HydrophobicContact CG2-CB 3.77Å; D36-A40 PolarHBondContact O-N 2.94Å; E37-A40 WeakPolarHBondContact O-CB 3.28Å; E37-A40 PolarHBondContact O-N 2.83Å; Q38-A40 VanDerWaalsContact C-N 3.32Å; Q38-A40 PolarHBondContact O-N 2.88Å; A40-S44 WeakPolarHBondContact O-CB 3.29Å; A40-S44 PolarHBondContact O-N 2.93Å; A40-S44 PolarHBondContact O-OG 3.11Å
41S94.4Very high93Very high77 Ų7766.1 Ų66.154%0.53838%0.379SS..Hα-helixtrans-63-51.1178-174.80000111.3E37 Q38 A39 I43 S44 E45E37-S41 WeakPolarHBondContact O-CB 3.3Å; E37-S41 PolarHBondContact O-N 2.94Å; Q38-S41 PolarHBondContact O-N 2.99Å; A39-S41 VanDerWaalsContact C-N 3.35Å; A39-S41 PolarHBondContact O-N 2.91Å; S41-I43 VanDerWaalsContact C-N 3.34Å; S41-I43 PolarHBondContact O-N 3.42Å; S41-S44 WeakPolarHBondContact O-CB 3.27Å; S41-S44 PolarHBondContact O-N 3.03Å; S41-S44 VanDerWaalsContact O-N 3.15Å; S41-E45 PolarHBondContact O-N 3.19Å
42A95.2Very high92.2Very high55 Ų5567.2 Ų67.246%0.45539%0.389SS..Hα-helixtrans-60.5-41.3-179.800000112.6Q38 A39 E45 L46Q38-A42 PolarHBondContact O-N 3.45Å; A39-A42 PolarHBondContact O-N 2.95Å; A42-E45 PolarHBondContact O-N 3.24Å; A42-L46 WeakPolarHBondContact O-CB 3.46Å; A42-L46 PolarHBondContact O-N 2.78Å
43I94.9Very high91.1Very high9 Ų969.1 Ų69.15%0.04639%0.394CS..Hα-helixtrans-68.6-38.8177.3-69.1177.9000111.3A39 S41 E45 L46 V47 L75 V77 V84 V86A39-I43 WeakPolarHBondContact O-CB 3.38Å; A39-I43 VanDerWaalsContact O-CG1 3.27Å; A39-I43 WeakPolarHBondContact O-CG1 3.26Å; A39-I43 PolarHBondContact O-N 3.36Å; S41-I43 VanDerWaalsContact C-N 3.34Å; S41-I43 PolarHBondContact O-N 3.42Å; I43-E45 VanDerWaalsContact C-N 3.32Å; I43-E45 PolarHBondContact O-N 2.78Å; I43-L46 PolarHBondContact O-N 3.38Å; I43-V47 HydrophobicContact CG2-CG2 4.15Å; I43-V47 WeakPolarHBondContact O-CB 3.41Å; I43-V47 VanDerWaalsContact O-CG2 3.3Å; I43-V47 WeakPolarHBondContact O-CG2 3.25Å; I43-V47 PolarHBondContact O-N 2.87Å; I43-L75 HydrophobicContact CD1-CD1 4.34Å; I43-V77 HydrophobicContact CG2-CG1 3.95Å; I43-V77 HydrophobicContact CG2-CG2 4.1Å; I43-V84 HydrophobicContact CG2-CG1 4.22Å; I43-V86 HydrophobicContact CD1-CB 4.19Å; I43-V86 HydrophobicContact CD1-CG1 3.47Å; I43-V86 VanDerWaalsContact CD1-CG1 3.47Å; I43-V86 HydrophobicContact CD1-CG2 3.69Å; I43-V86 HydrophobicContact CG2-CG2 3.78Å
44S93.2Very high89.5Confident31 Ų3175.3 Ų75.322%0.21742%0.417CS..Hα-helixtrans-61.3-43.7177.3-62.20000111.2L21 A40 S41 V47 S48L21-S44 VanDerWaalsContact CD1-OG 3.29Å; L21-S44 WeakPolarHBondContact CD1-OG 3.43Å; A40-S44 WeakPolarHBondContact O-CB 3.29Å; A40-S44 PolarHBondContact O-N 2.93Å; A40-S44 PolarHBondContact O-OG 3.11Å; S41-S44 WeakPolarHBondContact O-CB 3.27Å; S41-S44 PolarHBondContact O-N 3.03Å; S41-S44 VanDerWaalsContact O-N 3.15Å; S44-V47 PolarHBondContact O-N 3.17Å; S44-S48 VanDerWaalsContact O-CB 3.3Å; S44-S48 WeakPolarHBondContact O-CB 3.45Å; S44-S48 PolarHBondContact O-N 3.37Å
45E93.7Very high87.8Confident137 Ų13776.6 Ų76.664%0.6443%0.427SS*.Hα-helixtrans-65.8-42.8177.1-163.7174.5-153.300111.9S41 A42 I43 S48 T49S41-E45 PolarHBondContact O-N 3.19Å; A42-E45 PolarHBondContact O-N 3.24Å; I43-E45 VanDerWaalsContact C-N 3.32Å; I43-E45 PolarHBondContact O-N 2.78Å; E45-S48 PolarHBondContact O-N 3.26Å; E45-T49 VanDerWaalsContact O-CB 3.29Å; E45-T49 WeakPolarHBondContact O-CB 3.47Å; E45-T49 PolarHBondContact O-N 2.76Å; E45-T49 PolarHBondContact O-OG1 2.8Å
46L93.3Very high86.3Confident71 Ų7178.5 Ų78.537%0.37243%0.431SS..Hα-helixtrans-60-47.4175.5-178.367.1000112A42 I43 T49 A50 L66 V68A42-L46 WeakPolarHBondContact O-CB 3.46Å; A42-L46 PolarHBondContact O-N 2.78Å; I43-L46 PolarHBondContact O-N 3.38Å; L46-T49 PolarHBondContact O-N 3.11Å; L46-A50 VanDerWaalsContact O-CB 3.28Å; L46-A50 WeakPolarHBondContact O-CB 3.43Å; L46-A50 PolarHBondContact O-N 2.86Å; L46-L66 HydrophobicContact CD2-CD1 4.26Å; L46-L66 HydrophobicContact CD2-CD2 3.76Å; L46-L66 HydrophobicContact CG-CD1 4.09Å; L46-L66 HydrophobicContact CG-CD2 4.48Å; L46-V68 HydrophobicContact CD2-CG2 3.71Å
47V91.3Very high84.6Confident10 Ų1085.3 Ų85.36%0.06146%0.461CS..Hα-helixtrans-65.8-44.8179169.60000111I43 S44 T49 A50 C51 V77 V79 V84I43-V47 HydrophobicContact CG2-CG2 4.15Å; I43-V47 WeakPolarHBondContact O-CB 3.41Å; I43-V47 VanDerWaalsContact O-CG2 3.3Å; I43-V47 WeakPolarHBondContact O-CG2 3.25Å; I43-V47 PolarHBondContact O-N 2.87Å; S44-V47 PolarHBondContact O-N 3.17Å; V47-T49 VanDerWaalsContact C-N 3.3Å; V47-T49 PolarHBondContact O-N 3.18Å; V47-A50 PolarHBondContact O-N 2.91Å; V47-C51 VanDerWaalsContact O-CB 3.27Å; V47-C51 WeakPolarHBondContact O-CB 3.25Å; V47-C51 PolarHBondContact O-N 2.96Å; V47-C51 PolarHBondContact O-SG 2.8Å; V47-V77 HydrophobicContact CG2-CG1 3.56Å; V47-V79 HydrophobicContact CG1-CG2 3.48Å; V47-V79 VanDerWaalsContact CG1-CG2 3.48Å; V47-V84 HydrophobicContact CG1-CG2 4.46Å; V47-V84 HydrophobicContact CG2-CG1 4.16Å
48S89.9Confident83.1Confident86 Ų8680 Ų8060%0.60145%0.446SS*.Hα-helixtrans-57-47.6177.2-177.20000110.9S44 E45 C51 G52S44-S48 VanDerWaalsContact O-CB 3.3Å; S44-S48 WeakPolarHBondContact O-CB 3.45Å; S44-S48 PolarHBondContact O-N 3.37Å; E45-S48 PolarHBondContact O-N 3.26Å; S48-C51 PolarHBondContact O-N 2.84Å; S48-G52 PolarHBondContact O-N 3.39Å
49T90.1Very high81.5Confident74 Ų7480.7 Ų80.745%0.45445%0.452SS..Hα-helixtrans-62.1-51.8177.8-60.60000111.3E45 L46 V47 C51 G52 F53E45-T49 VanDerWaalsContact O-CB 3.29Å; E45-T49 WeakPolarHBondContact O-CB 3.47Å; E45-T49 PolarHBondContact O-N 2.76Å; E45-T49 PolarHBondContact O-OG1 2.8Å; L46-T49 PolarHBondContact O-N 3.11Å; V47-T49 VanDerWaalsContact C-N 3.3Å; V47-T49 PolarHBondContact O-N 3.18Å; T49-C51 VanDerWaalsContact C-N 3.33Å; T49-C51 PolarHBondContact O-N 2.86Å; T49-G52 PolarHBondContact O-N 2.85Å; T49-G52 VanDerWaalsContact O-N 3.1Å; T49-F53 HydrophobicContact CG2-CD2 3.96Å; T49-F53 HydrophobicContact CG2-CE2 3.49Å; T49-F53 VanDerWaalsContact CG2-CE2 3.49Å; T49-F53 WeakPolarHBondContact O-CD2 3.32Å; T49-F53 PolarHBondContact O-N 2.82Å; T49-F53 VanDerWaalsContact O-N 3.14Å
50A88.1Confident80.2Confident24 Ų2486.5 Ų86.520%0.19848%0.48CS..Hα-helixtrans-62.5-37.2-17900000113L46 V47 F53 F63 L66L46-A50 VanDerWaalsContact O-CB 3.28Å; L46-A50 WeakPolarHBondContact O-CB 3.43Å; L46-A50 PolarHBondContact O-N 2.86Å; V47-A50 PolarHBondContact O-N 2.91Å; A50-F53 PolarHBondContact O-N 2.83Å; A50-F63 HydrophobicContact CB-CE1 3.65Å; A50-F63 HydrophobicContact CB-CZ 3.89Å; A50-L66 HydrophobicContact CB-CD1 3.88Å
51C83.3Confident78.8Confident40 Ų4090.7 Ų90.727%0.2751%0.505SS..Hα-helixtrans-72.1-30.6174.8-72.90000112.6V47 S48 T49 F53V47-C51 VanDerWaalsContact O-CB 3.27Å; V47-C51 WeakPolarHBondContact O-CB 3.25Å; V47-C51 PolarHBondContact O-N 2.96Å; V47-C51 PolarHBondContact O-SG 2.8Å; S48-C51 PolarHBondContact O-N 2.84Å; T49-C51 VanDerWaalsContact C-N 3.33Å; T49-C51 PolarHBondContact O-N 2.86Å; C51-F53 VanDerWaalsContact C-N 3.29Å
52G81.1Confident77.8Confident59 Ų5990 Ų9061%0.60850%0.499SS*.Hα-helixtrans-67.4-27.7173.300000113.2S48 T49 R54S48-G52 PolarHBondContact O-N 3.39Å; T49-G52 PolarHBondContact O-N 2.85Å; T49-G52 VanDerWaalsContact O-N 3.1Å; G52-R54 PolarHBondContact O-N 3.04Å
53F72.1Confident77.2Confident132 Ų13289.9 Ų89.958%0.57949%0.488SS*.  trans-7587.4175.7-79.8-70.8000112.3T49 A50 C51 L55T49-F53 HydrophobicContact CG2-CD2 3.96Å; T49-F53 HydrophobicContact CG2-CE2 3.49Å; T49-F53 VanDerWaalsContact CG2-CE2 3.49Å; T49-F53 WeakPolarHBondContact O-CD2 3.32Å; T49-F53 PolarHBondContact O-N 2.82Å; T49-F53 VanDerWaalsContact O-N 3.14Å; A50-F53 PolarHBondContact O-N 2.83Å; C51-F53 VanDerWaalsContact C-N 3.29Å; F53-L55 VanDerWaalsContact C-N 3.34Å; F53-L55 PolarHBondContact O-N 3.5Å; F53-L55 VanDerWaalsContact O-N 3.08Å
54R64.1Low77Confident139 Ų13998.8 Ų98.853%0.52553%0.527SS..  trans-82.177.5169.4-61-153.9-173.7-114-0.2111.2G52 H56 G58 M59G52-R54 PolarHBondContact O-N 3.04Å; R54-H56 PolarHBondContact O-N 2.87Å; R54-G58 PolarHBondContact NH1-O 3.27Å; R54-M59 PolarHBondContact NH1-O 3.39Å
55L60.5Low77Confident148 Ų148104.8 Ų104.878%0.77555%0.545SS*.SBendtrans-57.9-29.7173.5-82.7159000112.8F53F53-L55 VanDerWaalsContact C-N 3.34Å; F53-L55 PolarHBondContact O-N 3.5Å; F53-L55 VanDerWaalsContact O-N 3.08Å
56H59.3Low77Confident162 Ų16299.7 Ų99.775%0.7552%0.521SS*.SBendtrans-118.1139.5171.9-63.5-70.2000108.9R54 G58R54-H56 PolarHBondContact O-N 2.87Å; H56-G58 PolarHBondContact O-N 3.42Å
57H58.2Low77.1Confident199 Ų19999 Ų9992%0.92152%0.523SS*.SBendtrans-68.728-176.3-61.814.9000114.1
58G60.8Low77.4Confident39 Ų39100.7 Ų100.740%0.40253%0.533SS..  trans-93152.4-178.800000113.2R54 H56 N60R54-G58 PolarHBondContact NH1-O 3.27Å; H56-G58 PolarHBondContact O-N 3.42Å; G58-N60 VanDerWaalsContact C-N 3.29Å; G58-N60 PolarHBondContact O-N 3.39Å
59M60.5Low77.7Confident179 Ų179101.5 Ų101.588%0.88253%0.534SS*.SBendtrans-71.8-18.2179.9-66.4177.763.300113.9R54R54-M59 PolarHBondContact NH1-O 3.39Å
60N65.5Low77.9Confident143 Ų143102.6 Ų102.677%0.76553%0.533SS*.SBendtrans-83.4153.8-176.8-74.5-23.1000113.7G58G58-N60 VanDerWaalsContact C-N 3.29Å; G58-N60 PolarHBondContact O-N 3.39Å
61V66.4Low78.1Confident90 Ų90104.6 Ų104.655%0.54556%0.556SS.*  trans-57.8131.6172.4-178.40000108.9F63V61-F63 PolarHBondContact O-N 3.41Å; V61-F63 VanDerWaalsContact O-N 3.13Å
62P72.4Confident78.6Confident64 Ų64108.9 Ų108.942%0.41657%0.572SS.*SBendtrans-70.2-11.3-168.622.8-30.2000114.5
63F83.2Confident79.3Confident52 Ų52108.2 Ų108.223%0.22855%0.553CS.*  trans-144.4153-178.456.7-91.2000112.1A50 V61 L66A50-F63 HydrophobicContact CB-CE1 3.65Å; A50-F63 HydrophobicContact CB-CZ 3.89Å; V61-F63 PolarHBondContact O-N 3.41Å; V61-F63 VanDerWaalsContact O-N 3.13Å; F63-L66 HydrophobicContact CD2-CB 4.25Å; F63-L66 HydrophobicContact CE2-CB 4.01Å; F63-L66 HydrophobicContact CZ-CD1 4.44Å
64K89.4Confident80.4Confident196 Ų196102.8 Ų102.885%0.85253%0.53SS*.SBendtrans-89-26.9171.7-65.8-175.8-179.7179.60113T78K64-T78 WeakPolarHBondContact O-CG2 3.47Å
65R93.3Very high82Confident157 Ų15797.2 Ų97.259%0.59251%0.511SS*.  trans-153.7135.9-177.8-174.2170.767.1-158.7-1.8109.8V77R65-V77 CarbonylContact C-O 3.6Å; R65-V77 WeakPolarHBondContact CA-O 3.27Å
66L93.9Very high83.8Confident29 Ų2991.8 Ų91.815%0.15248%0.482CS..EExtended strand (participates in β ladder)trans-103.1136.6170.2-173.8159.2000107.9L46 A50 F63 V68 V77L46-L66 HydrophobicContact CD2-CD1 4.26Å; L46-L66 HydrophobicContact CD2-CD2 3.76Å; L46-L66 HydrophobicContact CG-CD1 4.09Å; L46-L66 HydrophobicContact CG-CD2 4.48Å; A50-L66 HydrophobicContact CB-CD1 3.88Å; F63-L66 HydrophobicContact CD2-CB 4.25Å; F63-L66 HydrophobicContact CE2-CB 4.01Å; F63-L66 HydrophobicContact CZ-CD1 4.44Å; L66-V68 HydrophobicContact CD2-CG2 3.59Å; L66-V77 HydrophobicContact CB-CB 4.3Å; L66-V77 PolarHBondContact N-O 3.19Å; L66-V77 PolarHBondContact O-N 3.02Å
67S95.8Very high85.5Confident58 Ų5884.1 Ų84.141%0.40645%0.447SS..EExtended strand (participates in β ladder)trans-128119.1179-550000109.9L75 L76S67-L75 CarbonylContact C-O 3.58Å; S67-L75 WeakPolarHBondContact CA-O 3.21Å; S67-L76 VanDerWaalsContact OG-CD2 3.26Å; S67-L76 WeakPolarHBondContact OG-CD2 3.5Å
68V96.4Very high87.2Confident44 Ų4477 Ų7727%0.26742%0.417SS..EExtended strand (participates in β ladder)trans-100.1105.4172.1-170.90000107.5L46 L66 F70 T74 L75L46-V68 HydrophobicContact CD2-CG2 3.71Å; L66-V68 HydrophobicContact CD2-CG2 3.59Å; V68-F70 HydrophobicContact CB-CE2 4.16Å; V68-F70 HydrophobicContact CG1-CD2 4.36Å; V68-F70 HydrophobicContact CG1-CE1 4.43Å; V68-F70 HydrophobicContact CG1-CE2 3.58Å; V68-F70 HydrophobicContact CG1-CZ 3.63Å; V68-T74 CarbonylContact O-C 3.59Å; V68-T74 WeakPolarHBondContact O-CA 3.33Å; V68-L75 HydrophobicContact CB-CB 4.27Å; V68-L75 PolarHBondContact N-O 3.01Å; V68-L75 PolarHBondContact O-N 2.68Å
69V96.2Very high88.7Confident104 Ų10477.8 Ų77.863%0.6342%0.415SS*.EExtended strand (participates in β ladder)trans-95.8112-173.3-176.20000109.2T74V69-T74 HydrophobicContact CG2-CG2 3.98Å
70F94.4Very high90.1Very high96 Ų9673 Ų7342%0.42140%0.398SS..  trans-93.8179.7169-58.9-87.4000109.7V68 H73 L75 N91V68-F70 HydrophobicContact CB-CE2 4.16Å; V68-F70 HydrophobicContact CG1-CD2 4.36Å; V68-F70 HydrophobicContact CG1-CE1 4.43Å; V68-F70 HydrophobicContact CG1-CE2 3.58Å; V68-F70 HydrophobicContact CG1-CZ 3.63Å; F70-H73 CarbonylContact C-O 3.59Å; F70-H73 WeakPolarHBondContact CA-O 3.21Å; F70-H73 VanDerWaalsContact CB-O 3.32Å; F70-H73 WeakPolarHBondContact CB-O 3.38Å; F70-H73 AromaticContact CD2-CD2 3.67Å; F70-H73 AromaticContact CD2-CE1 3.92Å; F70-H73 AromaticContact CD2-NE2 3.3Å; F70-H73 VanDerWaalsContact CD2-NE2 3.3Å; F70-H73 WeakPolarHBondContact CD2-NE2 3.38Å; F70-H73 AromaticContact CE2-NE2 3.83Å; F70-H73 AromaticContact CG-CE1 3.95Å; F70-H73 AromaticContact CG-NE2 3.8Å; F70-H73 PolarHBondContact N-O 3.25Å; F70-L75 HydrophobicContact CE2-CD1 3.9Å; F70-L75 HydrophobicContact CE2-CG 4.04Å; F70-N91 PolarHBondContact O-ND2 2.94Å
71G92.9Very high91.1Very high66 Ų6669.6 Ų69.668%0.6840%0.397SS*.SBendtrans-58.8-56.5177.400000112.6N91G71-N91 PolarHBondContact O-ND2 3.44Å
72E93.5Very high92.1Very high131 Ų13172.8 Ų72.861%0.61241%0.406SS*.SBendtrans-94.4-19.6-172.2-59.1-52.7124.500114.5Q90 N91E72-Q90 VanDerWaalsContact O-CD 3.31Å; E72-Q90 PolarHBondContact O-NE2 3.3Å; E72-N91 WeakPolarHBondContact O-CB 3.27Å; E72-N91 PolarHBondContact O-N 3.49Å
73H95.4Very high93.1Very high44 Ų4474.6 Ų74.620%0.20441%0.405CS..EExtended strand (participates in β ladder)trans-147.6165.6-174.767.7-87.3000112.2L16 F70 K88 R89 N91L16-H73 HydrophobicContact CD1-CB 4.44Å; F70-H73 CarbonylContact C-O 3.59Å; F70-H73 WeakPolarHBondContact CA-O 3.21Å; F70-H73 VanDerWaalsContact CB-O 3.32Å; F70-H73 WeakPolarHBondContact CB-O 3.38Å; F70-H73 AromaticContact CD2-CD2 3.67Å; F70-H73 AromaticContact CD2-CE1 3.92Å; F70-H73 AromaticContact CD2-NE2 3.3Å; F70-H73 VanDerWaalsContact CD2-NE2 3.3Å; F70-H73 WeakPolarHBondContact CD2-NE2 3.38Å; F70-H73 AromaticContact CE2-NE2 3.83Å; F70-H73 AromaticContact CG-CE1 3.95Å; F70-H73 AromaticContact CG-NE2 3.8Å; F70-H73 PolarHBondContact N-O 3.25Å; H73-K88 HydrophobicContact CB-CG 4.29Å; H73-K88 WeakPolarHBondContact CD2-CE 3.45Å; H73-K88 VanDerWaalsContact CG-CE 3.48Å; H73-R89 CarbonylContact C-O 3.59Å; H73-R89 WeakPolarHBondContact CA-O 3.48Å; H73-R89 VanDerWaalsContact CB-O 3.27Å; H73-R89 WeakPolarHBondContact CB-O 3.46Å; H73-N91 WeakPolarHBondContact CA-OD1 3.25Å; H73-N91 PolarHBondContact N-ND2 3.05Å; H73-N91 PolarHBondContact O-ND2 2.7Å
74T96.8Very high93.6Very high18 Ų1873 Ų7311%0.1140%0.4CS..EExtended strand (participates in β ladder)trans-128.3134.7174.7-65.40000109.7V68 V69 L76 K88 R89 N91V68-T74 CarbonylContact O-C 3.59Å; V68-T74 WeakPolarHBondContact O-CA 3.33Å; V69-T74 HydrophobicContact CG2-CG2 3.98Å; T74-L76 HydrophobicContact CG2-CD2 3.72Å; T74-L76 HydrophobicContact CG2-CG 4.13Å; T74-K88 WeakPolarHBondContact O-CA 3.45Å; T74-R89 PolarHBondContact N-O 3.05Å; T74-R89 PolarHBondContact O-N 3.25Å; T74-N91 WeakPolarHBondContact CB-OD1 3.38Å; T74-N91 PolarHBondContact N-OD1 3.44Å; T74-N91 PolarHBondContact OG1-OD1 2.83Å
75L97.6Very high93.9Very high22 Ų2265.6 Ų65.612%0.11537%0.367CS..EExtended strand (participates in β ladder)trans-90.3118.3165.4-60.6176.8000109.1L33 I43 S67 V68 F70 V86 K88L33-L75 HydrophobicContact CD1-CD2 4.36Å; I43-L75 HydrophobicContact CD1-CD1 4.34Å; S67-L75 CarbonylContact C-O 3.58Å; S67-L75 WeakPolarHBondContact CA-O 3.21Å; V68-L75 HydrophobicContact CB-CB 4.27Å; V68-L75 PolarHBondContact N-O 3.01Å; V68-L75 PolarHBondContact O-N 2.68Å; F70-L75 HydrophobicContact CE2-CD1 3.9Å; F70-L75 HydrophobicContact CE2-CG 4.04Å; L75-V86 HydrophobicContact CD2-CG1 4.46Å; L75-K88 HydrophobicContact CD2-CB 3.68Å; L75-K88 HydrophobicContact CD2-CD 4.48Å; L75-K88 HydrophobicContact CD2-CG 3.84Å
76L96.9Very high94.1Very high34 Ų3458.1 Ų58.118%0.17834%0.339CS..EExtended strand (participates in β ladder)trans-101.7121.9175.8-61.4173.3000108.8S67 T74 V86 V87 R89S67-L76 VanDerWaalsContact OG-CD2 3.26Å; S67-L76 WeakPolarHBondContact OG-CD2 3.5Å; T74-L76 HydrophobicContact CG2-CD2 3.72Å; T74-L76 HydrophobicContact CG2-CG 4.13Å; L76-V86 CarbonylContact O-C 3.58Å; L76-V86 WeakPolarHBondContact O-CA 3.46Å; L76-V87 PolarHBondContact N-O 3.49Å; L76-V87 PolarHBondContact O-N 3.48Å; L76-R89 HydrophobicContact CD1-CG 4.18Å
77V96.3Very high94.3Very high1 Ų157.1 Ų57.11%0.00633%0.334CS..EExtended strand (participates in β ladder)trans-122.7131.1-175.3-171.70000110.7I43 V47 R65 L66 V84 F85 V86I43-V77 HydrophobicContact CG2-CG1 3.95Å; I43-V77 HydrophobicContact CG2-CG2 4.1Å; V47-V77 HydrophobicContact CG2-CG1 3.56Å; R65-V77 CarbonylContact C-O 3.6Å; R65-V77 WeakPolarHBondContact CA-O 3.27Å; L66-V77 HydrophobicContact CB-CB 4.3Å; L66-V77 PolarHBondContact N-O 3.19Å; L66-V77 PolarHBondContact O-N 3.02Å; V77-V84 HydrophobicContact CG1-CG1 3.58Å; V77-F85 CarbonylContact C-O 3.59Å; V77-F85 VanDerWaalsContact CA-O 3.28Å; V77-F85 WeakPolarHBondContact CA-O 3.46Å; V77-V86 HydrophobicContact CG1-CG2 4.33Å; V77-V86 HydrophobicContact CG2-CG1 4.32Å; V77-V86 HydrophobicContact CG2-CG2 4.25Å
78T94.2Very high94.4Very high49 Ų4956 Ų5630%0.30132%0.322SS..EExtended strand (participates in β ladder)trans-137.4142.4176.2-62.20000109.9K64 F85K64-T78 WeakPolarHBondContact O-CG2 3.47Å; T78-F85 PolarHBondContact N-O 3.08Å; T78-F85 PolarHBondContact O-N 3.05Å
79V91.4Very high94.4Very high57 Ų5757.6 Ų57.635%0.34532%0.323SS..EExtended strand (participates in β ladder)trans-104.6129172.4-172.70000109V47 R83 V84V47-V79 HydrophobicContact CG1-CG2 3.48Å; V47-V79 VanDerWaalsContact CG1-CG2 3.48Å; V79-R83 WeakPolarHBondContact CA-O 3.22Å; V79-V84 HydrophobicContact CG2-CG2 4.3Å
80S89.6Confident94.4Very high77 Ų7756.3 Ų56.354%0.53831%0.31SS..EExtended strand (participates in β ladder)trans-138.8122.4173.5-179.80000110Q82 R83S80-Q82 PolarHBondContact O-N 3.22Å; S80-R83 PolarHBondContact N-O 3.26Å; S80-R83 PolarHBondContact O-N 3.49Å
81G87.6Confident94.2Very high72 Ų7254 Ų5474%0.74230%0.303SS*.THydrogen-bonded Turntrans60.2-129.1-16600000110.3
82Q87.8Confident93.6Very high157 Ų15759.2 Ų59.273%0.73430%0.302SS*.THydrogen-bonded Turntrans-98.515176.5-66.1176.3-14.200113S80S80-Q82 PolarHBondContact O-N 3.22Å
83R92.6Very high92.2Very high102 Ų10256.3 Ų56.339%0.38531%0.307SS..EExtended strand (participates in β ladder)trans-113.3138-175.3-63.7179.3-173.3172.40.6111.7L21 V79 S80 F85L21-R83 CarbonylContact O-C 3.52Å; L21-R83 VanDerWaalsContact O-CA 3.25Å; L21-R83 WeakPolarHBondContact O-CA 3.47Å; V79-R83 WeakPolarHBondContact CA-O 3.22Å; S80-R83 PolarHBondContact N-O 3.26Å; S80-R83 PolarHBondContact O-N 3.49Å; R83-F85 HydrophobicContact CB-CD2 4.4Å; R83-F85 HydrophobicContact CB-CE2 3.62Å; R83-F85 HydrophobicContact CB-CZ 3.89Å
84V94.3Very high90.4Very high20 Ų2066 Ų6612%0.12134%0.342CS..EExtended strand (participates in β ladder)trans-100.1128.8171.5-174.40000108.1V20 L21 I43 V47 V77 V79 V86V20-V84 WeakPolarHBondContact CA-O 3.38Å; L21-V84 HydrophobicContact CB-CB 4.15Å; L21-V84 PolarHBondContact N-O 3.36Å; L21-V84 PolarHBondContact O-N 3.32Å; I43-V84 HydrophobicContact CG2-CG1 4.22Å; V47-V84 HydrophobicContact CG1-CG2 4.46Å; V47-V84 HydrophobicContact CG2-CG1 4.16Å; V77-V84 HydrophobicContact CG1-CG1 3.58Å; V79-V84 HydrophobicContact CG2-CG2 4.3Å; V84-V86 HydrophobicContact CG1-CG2 4.24Å
85F95.8Very high88.4Confident39 Ų3973.2 Ų73.217%0.17137%0.374CS..EExtended strand (participates in β ladder)trans-112.1126.6177.9-62.6-93000108.8L9 V20 V77 T78 R83L9-F85 HydrophobicContact CD1-CD1 4.34Å; V20-F85 HydrophobicContact CG1-CD1 4.27Å; V20-F85 HydrophobicContact CG1-CE1 4.06Å; V20-F85 HydrophobicContact CG2-CD1 4.11Å; V20-F85 HydrophobicContact CG2-CE1 4.39Å; V77-F85 CarbonylContact C-O 3.59Å; V77-F85 VanDerWaalsContact CA-O 3.28Å; V77-F85 WeakPolarHBondContact CA-O 3.46Å; T78-F85 PolarHBondContact N-O 3.08Å; T78-F85 PolarHBondContact O-N 3.05Å; R83-F85 HydrophobicContact CB-CD2 4.4Å; R83-F85 HydrophobicContact CB-CE2 3.62Å; R83-F85 HydrophobicContact CB-CZ 3.89Å
86V97.1Very high86.7Confident0 Ų077.6 Ų77.60%040%0.404CS..EExtended strand (participates in β ladder)trans-123.3133.9-180-175.30000108.7Y18 L19 L33 I43 L75 L76 V77 V84Y18-V86 CarbonylContact C-O 3.53Å; Y18-V86 WeakPolarHBondContact CA-O 3.47Å; Y18-V86 WeakPolarHBondContact CB-O 3.09Å; L19-V86 HydrophobicContact CB-CB 4.12Å; L19-V86 HydrophobicContact CD2-CB 4.3Å; L19-V86 HydrophobicContact CD2-CG2 3.89Å; L19-V86 PolarHBondContact N-O 3.43Å; L19-V86 WeakPolarHBondContact O-CB 3.45Å; L19-V86 PolarHBondContact O-N 3.3Å; L33-V86 HydrophobicContact CD1-CG1 3.88Å; I43-V86 HydrophobicContact CD1-CB 4.19Å; I43-V86 HydrophobicContact CD1-CG1 3.47Å; I43-V86 VanDerWaalsContact CD1-CG1 3.47Å; I43-V86 HydrophobicContact CD1-CG2 3.69Å; I43-V86 HydrophobicContact CG2-CG2 3.78Å; L75-V86 HydrophobicContact CD2-CG1 4.46Å; L76-V86 CarbonylContact O-C 3.58Å; L76-V86 WeakPolarHBondContact O-CA 3.46Å; V77-V86 HydrophobicContact CG1-CG2 4.33Å; V77-V86 HydrophobicContact CG2-CG1 4.32Å; V77-V86 HydrophobicContact CG2-CG2 4.25Å; V84-V86 HydrophobicContact CG1-CG2 4.24Å
87V97.6Very high85.3Confident9 Ų983.1 Ų83.16%0.05543%0.432CS..EExtended strand (participates in β ladder)trans-132.6124.8171.5-174.40000108.9L9 I12 Q15 L76 R89L9-V87 HydrophobicContact CD2-CG2 3.83Å; I12-V87 HydrophobicContact CD1-CB 4.46Å; I12-V87 HydrophobicContact CD1-CG1 4.14Å; I12-V87 HydrophobicContact CD1-CG2 3.74Å; I12-V87 HydrophobicContact CG2-CG1 4.37Å; Q15-V87 HydrophobicContact CB-CG1 4.12Å; Q15-V87 HydrophobicContact CG-CG1 3.76Å; L76-V87 PolarHBondContact N-O 3.49Å; L76-V87 PolarHBondContact O-N 3.48Å; V87-R89 HydrophobicContact CG1-CG 3.85Å
88K97.8Very high83.6Confident35 Ų3590.7 Ų90.715%0.15247%0.473CS..EExtended strand (participates in β ladder)trans-85.1122.7166.9-171.4-177.6-175.4-1730108.2Q15 L16 G17 D32 L33 H73 T74 L75Q15-K88 WeakPolarHBondContact CA-O 3.26Å; L16-K88 HydrophobicContact CB-CB 4.43Å; L16-K88 HydrophobicContact CB-CD 4.16Å; L16-K88 HydrophobicContact CB-CG 4.2Å; L16-K88 HydrophobicContact CD1-CD 4.43Å; L16-K88 HydrophobicContact CD1-CG 4.36Å; L16-K88 PolarHBondContact N-O 3.21Å; G17-K88 PolarHBondContact O-N 3.39Å; D32-K88 HydrophobicContact CB-CD 3.76Å; D32-K88 WeakPolarHBondContact OD2-CE 3.45Å; D32-K88 IonicContact OD2-NZ 3.85Å; D32-K88 PolarHBondContact OD2-NZ 3.03Å; L33-K88 HydrophobicContact CD1-CB 4.08Å; L33-K88 HydrophobicContact CG-CB 4.36Å; H73-K88 HydrophobicContact CB-CG 4.29Å; H73-K88 WeakPolarHBondContact CD2-CE 3.45Å; H73-K88 VanDerWaalsContact CG-CE 3.48Å; T74-K88 WeakPolarHBondContact O-CA 3.45Å; L75-K88 HydrophobicContact CD2-CB 3.68Å; L75-K88 HydrophobicContact CD2-CD 4.48Å; L75-K88 HydrophobicContact CD2-CG 3.84Å
89R96.5Very high81.7Confident77 Ų7798.3 Ų98.329%0.29152%0.518SS..EExtended strand (participates in β ladder)trans-120.5142.3175-65.3-173.971.6-151-5.3110.9I12 P13 D14 H73 T74 L76 V87I12-R89 HydrophobicContact CG2-CG 4.3Å; P13-R89 PolarHBondContact O-NE 2.83Å; P13-R89 PolarHBondContact O-NH2 3.02Å; D14-R89 VanDerWaalsContact O-CA 3.25Å; D14-R89 WeakPolarHBondContact O-CA 3.42Å; D14-R89 IonicContact OD2-NH2 3.59Å; H73-R89 CarbonylContact C-O 3.59Å; H73-R89 WeakPolarHBondContact CA-O 3.48Å; H73-R89 VanDerWaalsContact CB-O 3.27Å; H73-R89 WeakPolarHBondContact CB-O 3.46Å; T74-R89 PolarHBondContact N-O 3.05Å; T74-R89 PolarHBondContact O-N 3.25Å; L76-R89 HydrophobicContact CD1-CG 4.18Å; V87-R89 HydrophobicContact CG1-CG 3.85Å
90Q95.5Very high81.2Confident76 Ų76100.4 Ų100.436%0.35553%0.527SS..EExtended strand (participates in β ladder)trans-62135.6168.9-171.668.717.800109.4D14 L16 E72 R92D14-Q90 HydrophobicContact CB-CB 4.26Å; D14-Q90 PolarHBondContact O-N 2.89Å; L16-Q90 HydrophobicContact CD1-CB 4.09Å; L16-Q90 HydrophobicContact CD2-CB 4.43Å; L16-Q90 HydrophobicContact CG-CB 4.37Å; E72-Q90 VanDerWaalsContact O-CD 3.31Å; E72-Q90 PolarHBondContact O-NE2 3.3Å; Q90-R92 PolarHBondContact O-N 2.98Å
91N92.1Very high80.8Confident49 Ų49101.6 Ų101.626%0.26253%0.526SS..  trans-73.3107.7169.3-69.3-13.6000107.8F70 G71 E72 H73 T74F70-N91 PolarHBondContact O-ND2 2.94Å; G71-N91 PolarHBondContact O-ND2 3.44Å; E72-N91 WeakPolarHBondContact O-CB 3.27Å; E72-N91 PolarHBondContact O-N 3.49Å; H73-N91 WeakPolarHBondContact CA-OD1 3.25Å; H73-N91 PolarHBondContact N-ND2 3.05Å; H73-N91 PolarHBondContact O-ND2 2.7Å; T74-N91 WeakPolarHBondContact CB-OD1 3.38Å; T74-N91 PolarHBondContact N-OD1 3.44Å; T74-N91 PolarHBondContact OG1-OD1 2.83Å
92R78.8Confident80.4Confident175 Ų175103.2 Ų103.266%0.6651%0.514SS*.  trans-78.9135.5162.4-70.1-170174-163.81.7108.4D14 Q90 R94D14-R92 IonicContact OD1-CZ 2.7Å; D14-R92 IonicContact OD1-NE 2.83Å; D14-R92 PolarHBondContact OD1-NE 2.99Å; D14-R92 IonicContact OD1-NH2 3.06Å; D14-R92 PolarHBondContact OD1-NH2 2.93Å; D14-R92 WeakPolarHBondContact OD2-CD 3.25Å; D14-R92 IonicContact OD2-CZ 2.68Å; D14-R92 IonicContact OD2-NE 3.05Å; D14-R92 PolarHBondContact OD2-NE 3.09Å; D14-R92 IonicContact OD2-NH2 3.55Å; Q90-R92 PolarHBondContact O-N 2.98Å; R92-R94 PolarHBondContact O-N 3.34Å; R92-R94 VanDerWaalsContact O-N 3.11Å
93G65.3Low80Confident70 Ų70100.1 Ų100.172%0.72250%0.501SS*.  trans-51.412115800000106.8E95G93-E95 PolarHBondContact O-N 3.28Å
94R56.9Low79.2Confident248 Ų24899.9 Ų99.994%0.93651%0.509SS*.  trans-7081.2176.3-77-174.9177.4-173.70.3107.6R92R92-R94 PolarHBondContact O-N 3.34Å; R92-R94 VanDerWaalsContact O-N 3.11Å
95E55.3Low78.2Confident168 Ų168105.3 Ų105.379%0.78554%0.535SS*.  trans-68.3135.4156.6-70.4-176.3171.400107G93 I97G93-E95 PolarHBondContact O-N 3.28Å; E95-I97 PolarHBondContact O-N 2.9Å
96P60.6Low76.9Confident114 Ų114110 Ų11074%0.7456%0.561SS**  trans-52.3129.4173.5-20.430.3000109D98P96-D98 PolarHBondContact O-N 2.98Å
97I67.4Low75.4Confident151 Ų151118.5 Ų118.577%0.77460%0.604SS**  trans-76.7108.5166.2-55.4171000104.4E95 V99E95-I97 PolarHBondContact O-N 2.9Å; I97-V99 PolarHBondContact O-N 2.99Å
98D60.9Low73.5Confident160 Ų160127.6 Ų127.686%0.85665%0.649SS**  trans-59.8119.1169.1-77.4-31.9000108P96P96-D98 PolarHBondContact O-N 2.98Å
99V55.4Low71.3Confident208 Ų208136 Ų136100%1.26170%0.695SS**  trans-106.20177.2-85.70000110.8I97I97-V99 PolarHBondContact O-N 2.99Å

Retrieved 99 of 99 residues in 17.8 ms (Link to these results)