A0A5K4EC89_SCHMA Loading...

Cytochrome c-like protein; Putative cytochrome c

Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.

AlphaFold DB (A0A3Q0KE61), UniProt , Accession A0A5K4EC89, Species SCHMA (Schistosoma mansoni, Blood fluke), Gene n/a, Length 73 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M47.6Very low83.9Confident231 Ų231112.8 Ų112.8100%1.13864%0.639SS**  0114.10-89.364.7117.900108.7
2G70.2Confident84.9Confident72 Ų72114.3 Ų114.374%0.74263%0.633SS**PPolyproline II helixtrans-85.2148.8167.600000110.1
3F76Confident85.8Confident166 Ų166116.2 Ų116.273%0.72863%0.631SS**PPolyproline II helixtrans-83.8134.1167.1-65.5-84.9000108.1
4S85.5Confident86.6Confident107 Ų107113.3 Ų113.375%0.74861%0.614SS**PPolyproline II helixtrans-75.9163.8169.261.40000110.4
5E86.6Confident87.2Confident127 Ų127109.2 Ų109.259%0.59359%0.588SS**PPolyproline II helixtrans-59.4141.5172-159.9168142.700111.2
6G87.8Confident87.8Confident53 Ų53107.7 Ų107.755%0.54658%0.584SS.*  trans-106.2157.7-177.400000112.3I8G6-I8 PolarHBondContact O-N 2.81Å
7D93.6Very high88.3Confident77 Ų77109.2 Ų109.241%0.41259%0.586SS.*  trans-76.5113.1173178.7-33.9000110.1E9 K10 G11D7-E9 PolarHBondContact O-N 2.94Å; D7-E9 PolarHBondContact OD1-N 3.38Å; D7-E9 VanDerWaalsContact OD1-N 3.09Å; D7-K10 HydrophobicContact CB-CB 4.02Å; D7-K10 HydrophobicContact CB-CD 4.01Å; D7-K10 HydrophobicContact CB-CG 4.2Å; D7-K10 PolarHBondContact O-N 3.09Å; D7-K10 PolarHBondContact OD1-N 2.91Å; D7-K10 WeakPolarHBondContact OD2-CD 3.4Å; D7-K10 WeakPolarHBondContact OD2-CE 3.33Å; D7-K10 WeakPolarHBondContact OD2-CG 3.2Å; D7-K10 IonicContact OD2-NZ 2.81Å; D7-K10 PolarHBondContact OD2-NZ 3.1Å; D7-G11 PolarHBondContact O-N 3.44Å
8I92.5Very high88.8Confident133 Ų133114 Ų11468%0.68260%0.595SS**Hα-helixtrans-61.8-41.7-174.9-64.4176.2000111.6G6 G11 K12G6-I8 PolarHBondContact O-N 2.81Å; I8-G11 PolarHBondContact O-N 2.84Å; I8-K12 WeakPolarHBondContact O-CB 3.13Å; I8-K12 PolarHBondContact O-N 3.45Å
9E94.5Very high89.2Confident109 Ų109110.3 Ų110.351%0.50958%0.579SS.*Hα-helixtrans-70.3-39.3-177.8-77.4-60.311700111.5D7 K12 K13D7-E9 PolarHBondContact O-N 2.94Å; D7-E9 PolarHBondContact OD1-N 3.38Å; D7-E9 VanDerWaalsContact OD1-N 3.09Å; E9-K12 PolarHBondContact O-N 3.37Å; E9-K13 WeakPolarHBondContact O-CG 3.43Å; E9-K13 PolarHBondContact O-N 3.25Å; E9-K13 VanDerWaalsContact O-N 3.1Å
10K94.9Very high89.6Confident131 Ų131106.5 Ų106.557%0.5756%0.562SS**Hα-helixtrans-65.2-41.5170.2-71178.8-169.1133.90111.4D7 K12 K13 L14D7-K10 HydrophobicContact CB-CB 4.02Å; D7-K10 HydrophobicContact CB-CD 4.01Å; D7-K10 HydrophobicContact CB-CG 4.2Å; D7-K10 PolarHBondContact O-N 3.09Å; D7-K10 PolarHBondContact OD1-N 2.91Å; D7-K10 WeakPolarHBondContact OD2-CD 3.4Å; D7-K10 WeakPolarHBondContact OD2-CE 3.33Å; D7-K10 WeakPolarHBondContact OD2-CG 3.2Å; D7-K10 IonicContact OD2-NZ 2.81Å; D7-K10 PolarHBondContact OD2-NZ 3.1Å; K10-K12 VanDerWaalsContact C-N 3.33Å; K10-K12 PolarHBondContact O-N 3.25Å; K10-K13 PolarHBondContact O-N 3.4Å; K10-L14 WeakPolarHBondContact O-CB 3.47Å; K10-L14 WeakPolarHBondContact O-CG 3.3Å; K10-L14 PolarHBondContact O-N 3.43Å
11G93.6Very high89.9Confident35 Ų35108.6 Ų108.636%0.36157%0.569SS.*Hα-helixtrans-57.9-44.9176.200000112.2D7 I8 L14 F15D7-G11 PolarHBondContact O-N 3.44Å; I8-G11 PolarHBondContact O-N 2.84Å; G11-L14 PolarHBondContact O-N 3.48Å; G11-F15 WeakPolarHBondContact O-CB 3.47Å; G11-F15 PolarHBondContact O-N 2.87Å
12K95.5Very high92.3Very high131 Ų13199.9 Ų99.957%0.5753%0.53SS*.Hα-helixtrans-60.3-48.2174.9-176.5179178.1-177.90111.8I8 E9 K10 L14 F15 V16I8-K12 WeakPolarHBondContact O-CB 3.13Å; I8-K12 PolarHBondContact O-N 3.45Å; E9-K12 PolarHBondContact O-N 3.37Å; K10-K12 VanDerWaalsContact C-N 3.33Å; K10-K12 PolarHBondContact O-N 3.25Å; K12-L14 PolarHBondContact O-N 2.84Å; K12-F15 PolarHBondContact O-N 3.5Å; K12-V16 WeakPolarHBondContact O-CG2 3.48Å; K12-V16 PolarHBondContact O-N 2.68Å
13K96.7Very high93.6Very high138 Ų13898.8 Ų98.860%0.651%0.505SS*.Hα-helixtrans-59.1-46177.1-73175.2-177.8176.10111.7E9 K10 F15 V16 Q17E9-K13 WeakPolarHBondContact O-CG 3.43Å; E9-K13 PolarHBondContact O-N 3.25Å; E9-K13 VanDerWaalsContact O-N 3.1Å; K10-K13 PolarHBondContact O-N 3.4Å; K13-F15 VanDerWaalsContact C-N 3.35Å; K13-F15 PolarHBondContact O-N 3.44Å; K13-V16 PolarHBondContact O-N 3.35Å; K13-Q17 WeakPolarHBondContact O-CB 3.39Å; K13-Q17 VanDerWaalsContact O-CG 3.3Å; K13-Q17 WeakPolarHBondContact O-CG 3.42Å; K13-Q17 PolarHBondContact O-N 2.87Å
14L96.6Very high94.6Very high76 Ų7691.9 Ų91.940%0.39848%0.477SS..Hα-helixtrans-62.9-41.1177.4-72171.7000112K10 G11 K12 Q17 R18K10-L14 WeakPolarHBondContact O-CB 3.47Å; K10-L14 WeakPolarHBondContact O-CG 3.3Å; K10-L14 PolarHBondContact O-N 3.43Å; G11-L14 PolarHBondContact O-N 3.48Å; K12-L14 PolarHBondContact O-N 2.84Å; L14-Q17 PolarHBondContact O-N 2.86Å; L14-R18 WeakPolarHBondContact O-CB 3.44Å; L14-R18 PolarHBondContact O-N 3.25Å
15F96.3Very high95.1Very high52 Ų5290.3 Ų90.323%0.22846%0.462CS..Hα-helixtrans-61.8-46.5177.3-172.7-86.1000111.3G11 K12 K13 Q17 R18 C19 S20 H23 V25 L37G11-F15 WeakPolarHBondContact O-CB 3.47Å; G11-F15 PolarHBondContact O-N 2.87Å; K12-F15 PolarHBondContact O-N 3.5Å; K13-F15 VanDerWaalsContact C-N 3.35Å; K13-F15 PolarHBondContact O-N 3.44Å; F15-Q17 VanDerWaalsContact C-N 3.33Å; F15-Q17 PolarHBondContact O-N 3.48Å; F15-R18 PolarHBondContact O-N 2.87Å; F15-C19 HydrophobicContact CD1-CB 4.3Å; F15-C19 HydrophobicContact CD2-CB 3.52Å; F15-C19 HydrophobicContact CE1-CB 4.27Å; F15-C19 HydrophobicContact CE2-CB 3.49Å; F15-C19 VanDerWaalsContact CE2-CB 3.49Å; F15-C19 HydrophobicContact CG-CB 3.93Å; F15-C19 HydrophobicContact CZ-CB 3.87Å; F15-C19 CarbonylContact O-C 3.56Å; F15-C19 WeakPolarHBondContact O-CA 3.34Å; F15-C19 WeakPolarHBondContact O-CB 3.34Å; F15-C19 PolarHBondContact O-N 3Å; F15-S20 PolarHBondContact O-N 3.32Å; F15-H23 HydrophobicContact CZ-CB 4.12Å; F15-V25 HydrophobicContact CE1-CG1 3.95Å; F15-V25 HydrophobicContact CE2-CG1 3.75Å; F15-V25 HydrophobicContact CZ-CG1 3.4Å; F15-V25 VanDerWaalsContact CZ-CG1 3.4Å; F15-L37 HydrophobicContact CE2-CD1 4.01Å; F15-L37 HydrophobicContact CZ-CD1 4.4Å
16V96.2Very high95.5Very high85 Ų8590.8 Ų90.852%0.51547%0.465SS..Hα-helixtrans-59-47.4176.7174.20000110.4K12 K13 S20K12-V16 WeakPolarHBondContact O-CG2 3.48Å; K12-V16 PolarHBondContact O-N 2.68Å; K13-V16 PolarHBondContact O-N 3.35Å; V16-S20 PolarHBondContact O-OG 3.01Å
17Q97.3Very high95.8Very high133 Ų13397.3 Ų97.362%0.62148%0.478SS*.Hα-helixtrans-70-34.9-176.3-71.9175.3-21.600114.1K13 L14 F15K13-Q17 WeakPolarHBondContact O-CB 3.39Å; K13-Q17 VanDerWaalsContact O-CG 3.3Å; K13-Q17 WeakPolarHBondContact O-CG 3.42Å; K13-Q17 PolarHBondContact O-N 2.87Å; L14-Q17 PolarHBondContact O-N 2.86Å; F15-Q17 VanDerWaalsContact C-N 3.33Å; F15-Q17 PolarHBondContact O-N 3.48Å
18R96.7Very high95.7Very high196 Ų19697.5 Ų97.574%0.7450%0.498SS*.Hα-helixtrans-117.3-22.6-166.4-58-175.3178.9-173.3-0.9114.9L14 F15L14-R18 WeakPolarHBondContact O-CB 3.44Å; L14-R18 PolarHBondContact O-N 3.25Å; F15-R18 PolarHBondContact O-N 2.87Å
19C97Very high95.9Very high44 Ų4492 Ų9230%0.29748%0.475SS..THydrogen-bonded Turntrans-119.8-35-169.1-50.70000112.6F15 Q21 C22 H23F15-C19 HydrophobicContact CD1-CB 4.3Å; F15-C19 HydrophobicContact CD2-CB 3.52Å; F15-C19 HydrophobicContact CE1-CB 4.27Å; F15-C19 HydrophobicContact CE2-CB 3.49Å; F15-C19 VanDerWaalsContact CE2-CB 3.49Å; F15-C19 HydrophobicContact CG-CB 3.93Å; F15-C19 HydrophobicContact CZ-CB 3.87Å; F15-C19 CarbonylContact O-C 3.56Å; F15-C19 WeakPolarHBondContact O-CA 3.34Å; F15-C19 WeakPolarHBondContact O-CB 3.34Å; F15-C19 PolarHBondContact O-N 3Å; C19-Q21 PolarHBondContact O-N 3.15Å; C19-Q21 VanDerWaalsContact O-N 3.15Å; C19-C22 PolarHBondContact O-N 3.35Å; C19-H23 PolarHBondContact O-N 3.27Å
20S96Very high96Very high34 Ų3491.3 Ų91.324%0.23848%0.48CS..THydrogen-bonded Turntrans-65.8-20.7-168.176.90000114.8F15 V16 C22 K32F15-S20 PolarHBondContact O-N 3.32Å; V16-S20 PolarHBondContact O-OG 3.01Å; S20-C22 VanDerWaalsContact C-N 3.27Å; S20-C22 PolarHBondContact O-N 2.93Å; S20-K32 PolarHBondContact O-NZ 2.87Å
21Q97Very high96.1Very high151 Ų15188.2 Ų88.271%0.70647%0.467SS*.THydrogen-bonded Turntrans-64.2-36.5174.3-63.3-174.723.300111.1C19 K32C19-Q21 PolarHBondContact O-N 3.15Å; C19-Q21 VanDerWaalsContact O-N 3.15Å; Q21-K32 WeakPolarHBondContact O-CD 3.06Å
22C97.7Very high96.2Very high48 Ų4891.5 Ų91.532%0.32447%0.471SS..THydrogen-bonded Turntrans-105.2-20.6-176.6-600000113.6C19 S20 K32 V33 G34C19-C22 PolarHBondContact O-N 3.35Å; S20-C22 VanDerWaalsContact C-N 3.27Å; S20-C22 PolarHBondContact O-N 2.93Å; C22-K32 WeakPolarHBondContact O-CB 3.49Å; C22-V33 HydrophobicContact CB-CB 4.25Å; C22-G34 CarbonylContact O-C 3.58Å; C22-G34 VanDerWaalsContact O-CA 3.3Å; C22-G34 WeakPolarHBondContact O-CA 3.45Å; C22-G34 PolarHBondContact O-N 3.03Å
23H97.8Very high96.2Very high49 Ų4990.8 Ų90.823%0.22748%0.478CS..  trans-130.3153.8-170.5-65.3-77.4000113.6F15 C19 P35 L37F15-H23 HydrophobicContact CZ-CB 4.12Å; C19-H23 PolarHBondContact O-N 3.27Å; H23-P35 PolarHBondContact ND1-O 2.87Å; H23-L37 HydrophobicContact CB-CD1 3.69Å; H23-L37 HydrophobicContact CB-CG 3.95Å
24T96.9Very high96.2Very high21 Ų2184.5 Ų84.513%0.12945%0.452CS..  trans-118.3157.7168.357.20000109.4P30 K32 N36 L37T24-P30 HydrophobicContact CG2-CG 4.32Å; T24-P30 WeakPolarHBondContact CG2-O 3.37Å; T24-P30 PolarHBondContact OG1-O 2.95Å; T24-K32 HydrophobicContact CG2-CD 4.36Å; T24-K32 HydrophobicContact CG2-CG 4.25Å; T24-N36 VanDerWaalsContact OG1-CG 3.31Å; T24-N36 PolarHBondContact OG1-ND2 3.44Å; T24-L37 PolarHBondContact O-N 3.45Å
25V95.4Very high96.1Very high73 Ų7381.6 Ų81.644%0.44244%0.438SS..  trans-121.6-11.8179.6-65.90000113.6F15 L37 S38F15-V25 HydrophobicContact CE1-CG1 3.95Å; F15-V25 HydrophobicContact CE2-CG1 3.75Å; F15-V25 HydrophobicContact CZ-CG1 3.4Å; F15-V25 VanDerWaalsContact CZ-CG1 3.4Å; V25-L37 HydrophobicContact CG1-CB 4.33Å; V25-S38 WeakPolarHBondContact O-CB 3.41Å
26E94.9Very high96.1Very high137 Ų13779.6 Ų79.664%0.6443%0.43SS*.SBendtrans-69.3137.1-179.6-60.7-52.4138.800111.6G28 G29 N36E26-G28 PolarHBondContact O-N 2.77Å; E26-G29 PolarHBondContact O-N 3.14Å; E26-N36 PolarHBondContact O-ND2 2.66Å
27K93.8Very high96.1Very high190 Ų19077.3 Ų77.383%0.82641%0.414SS*.THydrogen-bonded Turntrans-62.8122.7177.2-173.9-180179-176.70109.8G29 S38K27-G29 PolarHBondContact O-N 3.44Å; K27-S38 WeakPolarHBondContact CA-OG 3.36Å
28G93.2Very high95.9Very high82 Ų8272.7 Ų72.785%0.84540%0.397SS*.THydrogen-bonded Turntrans77.13.6-175.900000114.6E26E26-G28 PolarHBondContact O-N 2.77Å
29G95.5Very high95.5Very high18 Ų1866 Ų6619%0.18639%0.389CS..PPolyproline II helixtrans-66.4163.4174.800000113.2E26 K27 N36E26-G29 PolarHBondContact O-N 3.14Å; K27-G29 PolarHBondContact O-N 3.44Å; G29-N36 VanDerWaalsContact C-ND2 3.26Å; G29-N36 WeakPolarHBondContact CA-ND2 3.47Å; G29-N36 PolarHBondContact N-ND2 3.47Å; G29-N36 PolarHBondContact O-ND2 3.33Å
30P96Very high95.2Very high94 Ų9465.6 Ų65.661%0.6138%0.383SS*.PPolyproline II helixtrans-69.6152.8-176.230-35.8000112T24T24-P30 HydrophobicContact CG2-CG 4.32Å; T24-P30 WeakPolarHBondContact CG2-O 3.37Å; T24-P30 PolarHBondContact OG1-O 2.95Å
31H97Very high94.9Very high65 Ų6569.3 Ų69.330%0.30140%0.395SS..PPolyproline II helixtrans-71.7152.1158.2-55.4-36.1000109.9N36 P49 Y51H31-N36 WeakPolarHBondContact ND1-CB 3.42Å; H31-N36 PolarHBondContact ND1-N 2.78Å; H31-P49 PolarHBondContact NE2-O 3.49Å; H31-Y51 HydrophobicContact CB-CD2 3.74Å; H31-Y51 HydrophobicContact CB-CE2 4.3Å; H31-Y51 AromaticContact CD2-CD2 3.95Å; H31-Y51 AromaticContact CG-CD2 3.71Å; H31-Y51 PolarHBondContact NE2-N 3.45Å
32K96.1Very high94.3Very high104 Ų10464.5 Ų64.545%0.45239%0.386SS..  trans-117.1-134.8168.5-55.7-179.4176.3-177.70108.2S20 Q21 C22 T24 G34S20-K32 PolarHBondContact O-NZ 2.87Å; Q21-K32 WeakPolarHBondContact O-CD 3.06Å; C22-K32 WeakPolarHBondContact O-CB 3.49Å; T24-K32 HydrophobicContact CG2-CD 4.36Å; T24-K32 HydrophobicContact CG2-CG 4.25Å; K32-G34 PolarHBondContact N-O 2.76Å; K32-G34 PolarHBondContact O-N 3.47Å
33V96.5Very high93.8Very high116 Ų11664.4 Ų64.470%0.70338%0.379SS*.SBendtrans-59.2-27.9168-1770000111.5C22 Y51C22-V33 HydrophobicContact CB-CB 4.25Å; V33-Y51 PolarHBondContact O-OH 2.81Å
34G95.3Very high93.3Very high6 Ų666.5 Ų66.56%0.06239%0.387CS..SBendtrans-120.4168.4173.200000112.9C22 K32 Y51C22-G34 CarbonylContact O-C 3.58Å; C22-G34 VanDerWaalsContact O-CA 3.3Å; C22-G34 WeakPolarHBondContact O-CA 3.45Å; C22-G34 PolarHBondContact O-N 3.03Å; K32-G34 PolarHBondContact N-O 2.76Å; K32-G34 PolarHBondContact O-N 3.47Å; G34-Y51 WeakPolarHBondContact CA-OH 3.3Å
35P96Very high92.9Very high16 Ų1666.5 Ų66.510%0.10439%0.388CS..  trans-66.6159.9178.728.4-38.4000112.7H23 L37 A48 Y51 Y53H23-P35 PolarHBondContact ND1-O 2.87Å; P35-L37 HydrophobicContact CG-CD2 4.45Å; P35-A48 HydrophobicContact CB-CB 3.79Å; P35-Y51 HydrophobicContact CB-CD1 3.81Å; P35-Y51 HydrophobicContact CB-CD2 4.04Å; P35-Y51 HydrophobicContact CB-CE1 4.25Å; P35-Y51 HydrophobicContact CB-CE2 4.45Å; P35-Y51 HydrophobicContact CB-CG 3.68Å; P35-Y51 HydrophobicContact CG-CD1 4.24Å; P35-Y51 HydrophobicContact CG-CE1 4.28Å; P35-Y53 HydrophobicContact CB-CE1 4.3Å; P35-Y53 WeakPolarHBondContact CB-OH 3.43Å; P35-Y53 HydrophobicContact CG-CE1 3.92Å; P35-Y53 WeakPolarHBondContact CG-OH 3.33Å
36N96.1Very high92.5Very high10 Ų1063.9 Ų63.95%0.05338%0.375CS..  trans-69.4133.8168.5-175.8-40.4000109.6T24 E26 G29 H31 S38 R43T24-N36 VanDerWaalsContact OG1-CG 3.31Å; T24-N36 PolarHBondContact OG1-ND2 3.44Å; E26-N36 PolarHBondContact O-ND2 2.66Å; G29-N36 VanDerWaalsContact C-ND2 3.26Å; G29-N36 WeakPolarHBondContact CA-ND2 3.47Å; G29-N36 PolarHBondContact N-ND2 3.47Å; G29-N36 PolarHBondContact O-ND2 3.33Å; H31-N36 WeakPolarHBondContact ND1-CB 3.42Å; H31-N36 PolarHBondContact ND1-N 2.78Å; N36-S38 WeakPolarHBondContact OD1-CA 3.45Å; N36-S38 WeakPolarHBondContact OD1-CB 3.44Å; N36-S38 PolarHBondContact OD1-N 3.01Å; N36-R43 PolarHBondContact O-NH1 3.19Å; N36-R43 PolarHBondContact O-NH2 3.33Å; N36-R43 VanDerWaalsContact O-NH2 3.12Å
37L95.3Very high92.2Very high37 Ų3762.4 Ų62.419%0.19437%0.369CS..  trans-98.13.9-175.7-55.5-176.2000113.6F15 H23 T24 V25 P35 G39 L40F15-L37 HydrophobicContact CE2-CD1 4.01Å; F15-L37 HydrophobicContact CZ-CD1 4.4Å; H23-L37 HydrophobicContact CB-CD1 3.69Å; H23-L37 HydrophobicContact CB-CG 3.95Å; T24-L37 PolarHBondContact O-N 3.45Å; V25-L37 HydrophobicContact CG1-CB 4.33Å; P35-L37 HydrophobicContact CG-CD2 4.45Å; L37-G39 PolarHBondContact O-N 3.26Å; L37-L40 HydrophobicContact CB-CB 4.24Å; L37-L40 HydrophobicContact CB-CD2 4.25Å; L37-L40 HydrophobicContact CD1-CD2 4.45Å; L37-L40 HydrophobicContact CD2-CD1 4.06Å; L37-L40 HydrophobicContact CD2-CD2 4Å; L37-L40 HydrophobicContact CD2-CG 4.49Å; L37-L40 HydrophobicContact CG-CD2 4.45Å; L37-L40 WeakPolarHBondContact O-CB 3.11Å; L37-L40 PolarHBondContact O-N 2.91Å
38S92.9Very high92.1Very high36 Ų3653.6 Ų53.625%0.25233%0.331SS..THydrogen-bonded Turntrans-55.3127.7165.5172.70000109.7V25 K27 N36 L40 R43V25-S38 WeakPolarHBondContact O-CB 3.41Å; K27-S38 WeakPolarHBondContact CA-OG 3.36Å; N36-S38 WeakPolarHBondContact OD1-CA 3.45Å; N36-S38 WeakPolarHBondContact OD1-CB 3.44Å; N36-S38 PolarHBondContact OD1-N 3.01Å; S38-L40 PolarHBondContact O-N 3.12Å; S38-R43 PolarHBondContact O-NH1 2.99Å
39G89.8Confident91.9Very high55 Ų5555.1 Ų55.157%0.56733%0.326SS*.THydrogen-bonded Turntrans65.621-176.900000113.9L37 F41 R43L37-G39 PolarHBondContact O-N 3.26Å; G39-F41 PolarHBondContact O-N 3.3Å; G39-R43 WeakPolarHBondContact O-CB 3.4Å
40L90.7Very high91.8Very high36 Ų3658 Ų5819%0.18836%0.355CS..  trans-59.6-45.4179.7178.968.7000112.2L37 S38 G42 R43 L64L37-L40 HydrophobicContact CB-CB 4.24Å; L37-L40 HydrophobicContact CB-CD2 4.25Å; L37-L40 HydrophobicContact CD1-CD2 4.45Å; L37-L40 HydrophobicContact CD2-CD1 4.06Å; L37-L40 HydrophobicContact CD2-CD2 4Å; L37-L40 HydrophobicContact CD2-CG 4.49Å; L37-L40 HydrophobicContact CG-CD2 4.45Å; L37-L40 WeakPolarHBondContact O-CB 3.11Å; L37-L40 PolarHBondContact O-N 2.91Å; S38-L40 PolarHBondContact O-N 3.12Å; L40-G42 PolarHBondContact O-N 3.47Å; L40-R43 VanDerWaalsContact O-CB 3.31Å; L40-R43 WeakPolarHBondContact O-CB 3.47Å; L40-R43 PolarHBondContact O-N 3.42Å; L40-R43 VanDerWaalsContact O-N 3.1Å; L40-L64 HydrophobicContact CD1-CD1 4.21Å; L40-L64 HydrophobicContact CD1-CD2 3.86Å; L40-L64 HydrophobicContact CD1-CG 4.49Å; L40-L64 HydrophobicContact CD2-CD2 3.8Å; L40-L64 HydrophobicContact CG-CB 4.46Å; L40-L64 HydrophobicContact CG-CD2 3.76Å
41F88.2Confident91.7Very high112 Ų11256.4 Ų56.449%0.49134%0.338SS..THydrogen-bonded Turntrans-71128.6-179-62.1-77.6000111G39 R43 L64 L66G39-F41 PolarHBondContact O-N 3.3Å; F41-R43 VanDerWaalsContact C-N 3.27Å; F41-L64 CarbonylContact C-O 3.53Å; F41-L64 WeakPolarHBondContact CA-O 3.38Å; F41-L66 HydrophobicContact CB-CB 4Å; F41-L66 HydrophobicContact CB-CD1 3.19Å; F41-L66 HydrophobicContact CB-CG 4.21Å; F41-L66 HydrophobicContact CD1-CD1 4.48Å; F41-L66 HydrophobicContact CD2-CD1 4.32Å; F41-L66 HydrophobicContact CG-CD1 3.81Å
42G84.5Confident91.5Very high50 Ų5059.4 Ų59.452%0.51536%0.361SS..THydrogen-bonded Turntrans86.2-12.1-171.200000114L40 L64L40-G42 PolarHBondContact O-N 3.47Å; G42-L64 PolarHBondContact N-O 3.44Å
43R88.2Confident91.3Very high45 Ų4556.3 Ų56.317%0.1735%0.347CS..PPolyproline II helixtrans-83.4145.1176.3-167.7175.870-167.90.2110.8N36 S38 G39 L40 F41 Q47 L64N36-R43 PolarHBondContact O-NH1 3.19Å; N36-R43 PolarHBondContact O-NH2 3.33Å; N36-R43 VanDerWaalsContact O-NH2 3.12Å; S38-R43 PolarHBondContact O-NH1 2.99Å; G39-R43 WeakPolarHBondContact O-CB 3.4Å; L40-R43 VanDerWaalsContact O-CB 3.31Å; L40-R43 WeakPolarHBondContact O-CB 3.47Å; L40-R43 PolarHBondContact O-N 3.42Å; L40-R43 VanDerWaalsContact O-N 3.1Å; F41-R43 VanDerWaalsContact C-N 3.27Å; R43-Q47 HydrophobicContact CG-CB 4.2Å; R43-L64 PolarHBondContact O-N 3.33Å; R43-L64 VanDerWaalsContact O-N 3.14Å
44K86.8Confident91Very high93 Ų9355.2 Ų55.240%0.40434%0.341SS..BIsolated β-bridgetrans-71.1147.6168.9-72.7174.9176.3-176.80110.7Q47 V61 L62 I63K44-Q47 HydrophobicContact CB-CG 4.04Å; K44-V61 HydrophobicContact CB-CG1 4.47Å; K44-V61 HydrophobicContact CD-CG1 3.77Å; K44-V61 HydrophobicContact CG-CG1 4.21Å; K44-L62 CarbonylContact C-O 3.43Å; K44-L62 VanDerWaalsContact CA-O 3.28Å; K44-L62 WeakPolarHBondContact CA-O 3.33Å; K44-I63 HydrophobicContact CG-CG1 3.96Å
45T88.4Confident90.7Very high22 Ų2258.9 Ų58.914%0.13537%0.37CS..THydrogen-bonded Turntrans-57.6149.817354.20000111.2Q47 N57 V61 L62 L64T45-Q47 VanDerWaalsContact C-N 3.32Å; T45-Q47 WeakPolarHBondContact O-CG 3.28Å; T45-Q47 PolarHBondContact O-N 2.72Å; T45-N57 WeakPolarHBondContact CB-O 3.46Å; T45-N57 PolarHBondContact OG1-O 3.28Å; T45-V61 WeakPolarHBondContact OG1-CA 3.42Å; T45-V61 PolarHBondContact OG1-N 3.23Å; T45-L62 HydrophobicContact CG2-CB 3.83Å; T45-L62 PolarHBondContact N-O 3.41Å; T45-L62 PolarHBondContact OG1-N 3.16Å; T45-L64 HydrophobicContact CG2-CD1 3.66Å
46G87.7Confident90.3Very high18 Ų1861.3 Ų61.319%0.18639%0.391CS..THydrogen-bonded Turntrans74.413.6177.900000115.9Y53 N57G46-Y53 VanDerWaalsContact C-CE2 3.42Å; G46-Y53 WeakPolarHBondContact O-CD2 3.45Å; G46-N57 WeakPolarHBondContact CA-OD1 3.38Å; G46-N57 PolarHBondContact N-OD1 3.02Å
47Q88.7Confident89.7Confident106 Ų10663.7 Ų63.750%0.49540%0.404SS..  trans-119.815.7-171-56.3-157.2700116.1R43 K44 T45 P49R43-Q47 HydrophobicContact CG-CB 4.2Å; K44-Q47 HydrophobicContact CB-CG 4.04Å; T45-Q47 VanDerWaalsContact C-N 3.32Å; T45-Q47 WeakPolarHBondContact O-CG 3.28Å; T45-Q47 PolarHBondContact O-N 2.72Å; Q47-P49 VanDerWaalsContact O-CD 3.27Å; Q47-P49 WeakPolarHBondContact O-CD 3.49Å
48A90.8Very high89Confident5 Ų566.3 Ų66.34%0.04142%0.418CS..  trans-66.2121.3168.200000109.1P35 G50 Y51 Y53P35-A48 HydrophobicContact CB-CB 3.79Å; A48-G50 PolarHBondContact O-N 3.45Å; A48-Y51 PolarHBondContact O-N 3.28Å; A48-Y53 HydrophobicContact CB-CE2 4.15Å; A48-Y53 WeakPolarHBondContact CB-OH 3.18Å; A48-Y53 PolarHBondContact N-OH 3.05Å; A48-Y53 VanDerWaalsContact N-OH 3.16Å
49P90.2Very high88.2Confident113 Ų11368.9 Ų68.973%0.73444%0.435SS*.THydrogen-bonded Turntrans-60.2134.6-179.2-22.433.6000110.9H31 Q47 Y51H31-P49 PolarHBondContact NE2-O 3.49Å; Q47-P49 VanDerWaalsContact O-CD 3.27Å; Q47-P49 WeakPolarHBondContact O-CD 3.49Å; P49-Y51 VanDerWaalsContact C-N 3.32Å; P49-Y51 PolarHBondContact O-N 3Å
50G92Very high87.6Confident78 Ų7873.2 Ų73.280%0.80444%0.438SS*.THydrogen-bonded Turntrans81.9-2176.700000115.9A48A48-G50 PolarHBondContact O-N 3.45Å
51Y94.8Very high86.8Confident61 Ų6175 Ų7524%0.23945%0.451CS..  trans-98.9138.3176.5-170.2-96.9000112.2H31 V33 G34 P35 A48 P49 Y53H31-Y51 HydrophobicContact CB-CD2 3.74Å; H31-Y51 HydrophobicContact CB-CE2 4.3Å; H31-Y51 AromaticContact CD2-CD2 3.95Å; H31-Y51 AromaticContact CG-CD2 3.71Å; H31-Y51 PolarHBondContact NE2-N 3.45Å; V33-Y51 PolarHBondContact O-OH 2.81Å; G34-Y51 WeakPolarHBondContact CA-OH 3.3Å; P35-Y51 HydrophobicContact CB-CD1 3.81Å; P35-Y51 HydrophobicContact CB-CD2 4.04Å; P35-Y51 HydrophobicContact CB-CE1 4.25Å; P35-Y51 HydrophobicContact CB-CE2 4.45Å; P35-Y51 HydrophobicContact CB-CG 3.68Å; P35-Y51 HydrophobicContact CG-CD1 4.24Å; P35-Y51 HydrophobicContact CG-CE1 4.28Å; A48-Y51 PolarHBondContact O-N 3.28Å; P49-Y51 VanDerWaalsContact C-N 3.32Å; P49-Y51 PolarHBondContact O-N 3Å; Y51-Y53 AromaticContact CD1-CD1 3.91Å; Y51-Y53 HydrophobicContact CD1-CD1 3.91Å; Y51-Y53 AromaticContact CD1-CD2 3.7Å; Y51-Y53 HydrophobicContact CD1-CD2 3.7Å; Y51-Y53 AromaticContact CD1-CE1 3.8Å; Y51-Y53 HydrophobicContact CD1-CE1 3.8Å; Y51-Y53 AromaticContact CD1-CE2 3.56Å; Y51-Y53 HydrophobicContact CD1-CE2 3.56Å; Y51-Y53 AromaticContact CD1-CG 3.87Å; Y51-Y53 HydrophobicContact CD1-CG 3.87Å; Y51-Y53 AromaticContact CD1-CZ 3.61Å; Y51-Y53 HydrophobicContact CE1-CD1 4.09Å; Y51-Y53 HydrophobicContact CE1-CE1 4.16Å; Y51-Y53 HydrophobicContact CE1-CG 4.31Å; Y51-Y53 HydrophobicContact CG-CE2 4.18Å; Y51-Y53 WeakPolarHBondContact O-CD2 3.31Å
52T93.5Very high86.3Confident129 Ų12974.4 Ų74.479%0.79145%0.452SS*.  trans-89.1115.1176.3-59.70000110.5
53Y91.8Very high85.9Confident38 Ų3877.1 Ų77.115%0.14945%0.454CS..  trans-98.8158.3-179-72.9-88.3000112.7P35 G46 A48 Y51 N57P35-Y53 HydrophobicContact CB-CE1 4.3Å; P35-Y53 WeakPolarHBondContact CB-OH 3.43Å; P35-Y53 HydrophobicContact CG-CE1 3.92Å; P35-Y53 WeakPolarHBondContact CG-OH 3.33Å; G46-Y53 VanDerWaalsContact C-CE2 3.42Å; G46-Y53 WeakPolarHBondContact O-CD2 3.45Å; A48-Y53 HydrophobicContact CB-CE2 4.15Å; A48-Y53 WeakPolarHBondContact CB-OH 3.18Å; A48-Y53 PolarHBondContact N-OH 3.05Å; A48-Y53 VanDerWaalsContact N-OH 3.16Å; Y51-Y53 AromaticContact CD1-CD1 3.91Å; Y51-Y53 HydrophobicContact CD1-CD1 3.91Å; Y51-Y53 AromaticContact CD1-CD2 3.7Å; Y51-Y53 HydrophobicContact CD1-CD2 3.7Å; Y51-Y53 AromaticContact CD1-CE1 3.8Å; Y51-Y53 HydrophobicContact CD1-CE1 3.8Å; Y51-Y53 AromaticContact CD1-CE2 3.56Å; Y51-Y53 HydrophobicContact CD1-CE2 3.56Å; Y51-Y53 AromaticContact CD1-CG 3.87Å; Y51-Y53 HydrophobicContact CD1-CG 3.87Å; Y51-Y53 AromaticContact CD1-CZ 3.61Å; Y51-Y53 HydrophobicContact CE1-CD1 4.09Å; Y51-Y53 HydrophobicContact CE1-CE1 4.16Å; Y51-Y53 HydrophobicContact CE1-CG 4.31Å; Y51-Y53 HydrophobicContact CG-CE2 4.18Å; Y51-Y53 WeakPolarHBondContact O-CD2 3.31Å; Y53-N57 HydrophobicContact CD1-CB 4.16Å; Y53-N57 WeakPolarHBondContact CD1-OD1 3.33Å
54T89.4Confident85Confident94 Ų9477.9 Ų77.958%0.57746%0.461SS*.  trans-72.7150.7166.765.20000110.7A56 N57 I58T54-A56 PolarHBondContact O-N 3.29Å; T54-N57 PolarHBondContact O-N 3.1Å; T54-N57 PolarHBondContact OG1-N 3Å; T54-I58 PolarHBondContact O-N 2.74Å
55A88.1Confident84Confident82 Ų8276.6 Ų76.668%0.67846%0.464SS*.Hα-helixtrans-54.8-36.8177.100000112.4N57 I58 S59A55-N57 PolarHBondContact O-N 3.46Å; A55-I58 PolarHBondContact O-N 3.02Å; A55-S59 WeakPolarHBondContact O-CB 3.44Å; A55-S59 PolarHBondContact O-N 2.8Å; A55-S59 PolarHBondContact O-OG 2.83Å
56A88.2Confident82.3Confident67 Ų6778.8 Ų78.855%0.55447%0.474SS*.Hα-helixtrans-64.5-35.1177.900000113.5T54 S59 K60T54-A56 PolarHBondContact O-N 3.29Å; A56-S59 PolarHBondContact O-OG 3.18Å; A56-K60 WeakPolarHBondContact O-CG 2.97Å; A56-K60 PolarHBondContact O-N 3.29Å
57N83.3Confident80.6Confident61 Ų6183.7 Ų83.733%0.32650%0.496SS..Hα-helixtrans-73.5-37.4178.8-164.5-80.9000111.6T45 G46 Y53 T54 A55T45-N57 WeakPolarHBondContact CB-O 3.46Å; T45-N57 PolarHBondContact OG1-O 3.28Å; G46-N57 WeakPolarHBondContact CA-OD1 3.38Å; G46-N57 PolarHBondContact N-OD1 3.02Å; Y53-N57 HydrophobicContact CD1-CB 4.16Å; Y53-N57 WeakPolarHBondContact CD1-OD1 3.33Å; T54-N57 PolarHBondContact O-N 3.1Å; T54-N57 PolarHBondContact OG1-N 3Å; A55-N57 PolarHBondContact O-N 3.46Å
58I80.8Confident78.8Confident92 Ų9283 Ų8347%0.47250%0.495SS..Hα-helixtrans-67.7-45.2177.5-62170.6000110.5T54 A55 K60 V61T54-I58 PolarHBondContact O-N 2.74Å; A55-I58 PolarHBondContact O-N 3.02Å; I58-K60 VanDerWaalsContact C-N 3.3Å; I58-K60 PolarHBondContact O-N 3.42Å; I58-V61 WeakPolarHBondContact O-CG2 3.27Å; I58-V61 PolarHBondContact O-N 2.97Å
59S77.1Confident76.5Confident89 Ų8991.5 Ų91.562%0.62253%0.526SS*.Hα-helixtrans-70-24-174.366.20000114.2A55 A56 V61A55-S59 WeakPolarHBondContact O-CB 3.44Å; A55-S59 PolarHBondContact O-N 2.8Å; A55-S59 PolarHBondContact O-OG 2.83Å; A56-S59 PolarHBondContact O-OG 3.18Å; S59-V61 VanDerWaalsContact C-N 3.33Å; S59-V61 PolarHBondContact O-N 3.38Å
60K76.4Confident74.1Confident146 Ų14696.5 Ų96.564%0.63553%0.532SS*.THydrogen-bonded Turntrans-69.7-24.5179.9-87.3-82-176.7176.70114.2A56 I58 L62A56-K60 WeakPolarHBondContact O-CG 2.97Å; A56-K60 PolarHBondContact O-N 3.29Å; I58-K60 VanDerWaalsContact C-N 3.3Å; I58-K60 PolarHBondContact O-N 3.42Å; K60-L62 HydrophobicContact CB-CG 4.23Å; K60-L62 HydrophobicContact CD-CD1 4.46Å; K60-L62 WeakPolarHBondContact O-CG 3.48Å; K60-L62 PolarHBondContact O-N 2.95Å
61V73.1Confident71.4Confident75 Ų7599.9 Ų99.946%0.45553%0.526SS..  trans35.947.9179.5-1600000113.8K44 T45 I58 S59K44-V61 HydrophobicContact CB-CG1 4.47Å; K44-V61 HydrophobicContact CD-CG1 3.77Å; K44-V61 HydrophobicContact CG-CG1 4.21Å; T45-V61 WeakPolarHBondContact OG1-CA 3.42Å; T45-V61 PolarHBondContact OG1-N 3.23Å; I58-V61 WeakPolarHBondContact O-CG2 3.27Å; I58-V61 PolarHBondContact O-N 2.97Å; S59-V61 VanDerWaalsContact C-N 3.33Å; S59-V61 PolarHBondContact O-N 3.38Å
62L79.1Confident68.4Low99 Ų99105 Ų10552%0.51855%0.554SS.*  trans-84.5136179.4-60.8176.2000109.4K44 T45 K60K44-L62 CarbonylContact C-O 3.43Å; K44-L62 VanDerWaalsContact CA-O 3.28Å; K44-L62 WeakPolarHBondContact CA-O 3.33Å; T45-L62 HydrophobicContact CG2-CB 3.83Å; T45-L62 PolarHBondContact N-O 3.41Å; T45-L62 PolarHBondContact OG1-N 3.16Å; K60-L62 HydrophobicContact CB-CG 4.23Å; K60-L62 HydrophobicContact CD-CD1 4.46Å; K60-L62 WeakPolarHBondContact O-CG 3.48Å; K60-L62 PolarHBondContact O-N 2.95Å
63I75.5Confident65.8Low106 Ų106111.5 Ų111.554%0.54458%0.576SS.*BIsolated β-bridgetrans-82.9120.7167.1-61.7174.7000106.7K44 S65K44-I63 HydrophobicContact CG-CG1 3.96Å; I63-S65 VanDerWaalsContact C-N 3.34Å; I63-S65 PolarHBondContact O-N 3.24Å
64L69.1Low64.5Low61 Ų61115.2 Ų115.232%0.31960%0.597SS.*  trans-73.594.6172.3-8193.2000108.4L40 F41 G42 R43 T45 L66L40-L64 HydrophobicContact CD1-CD1 4.21Å; L40-L64 HydrophobicContact CD1-CD2 3.86Å; L40-L64 HydrophobicContact CD1-CG 4.49Å; L40-L64 HydrophobicContact CD2-CD2 3.8Å; L40-L64 HydrophobicContact CG-CB 4.46Å; L40-L64 HydrophobicContact CG-CD2 3.76Å; F41-L64 CarbonylContact C-O 3.53Å; F41-L64 WeakPolarHBondContact CA-O 3.38Å; G42-L64 PolarHBondContact N-O 3.44Å; R43-L64 PolarHBondContact O-N 3.33Å; R43-L64 VanDerWaalsContact O-N 3.14Å; T45-L64 HydrophobicContact CG2-CD1 3.66Å; L64-L66 PolarHBondContact O-N 3.47Å
65S65.1Low63.2Low67 Ų67116.3 Ų116.347%0.46960%0.598SS.*  trans-61.2131.4-169.661.50000112.9I63 L67I63-S65 VanDerWaalsContact C-N 3.34Å; I63-S65 PolarHBondContact O-N 3.24Å; S65-L67 PolarHBondContact O-N 2.91Å
66L54.3Low61.8Low68 Ų68118.2 Ų118.236%0.35659%0.594SS.*  trans-9061.3173.6-172.686.3000110.4F41 L64 L68 R69F41-L66 HydrophobicContact CB-CB 4Å; F41-L66 HydrophobicContact CB-CD1 3.19Å; F41-L66 HydrophobicContact CB-CG 4.21Å; F41-L66 HydrophobicContact CD1-CD1 4.48Å; F41-L66 HydrophobicContact CD2-CD1 4.32Å; F41-L66 HydrophobicContact CG-CD1 3.81Å; L64-L66 PolarHBondContact O-N 3.47Å; L66-L68 PolarHBondContact O-N 3.41Å; L66-R69 HydrophobicContact CD1-CG 3.85Å; L66-R69 HydrophobicContact CD2-CB 3.89Å; L66-R69 HydrophobicContact CD2-CG 3.82Å; L66-R69 HydrophobicContact CG-CB 4.06Å; L66-R69 HydrophobicContact CG-CG 3.87Å
67L51.3Low60.2Low121 Ų121121.2 Ų121.263%0.63460%0.596SS**THydrogen-bonded Turntrans-76.74172.7-90162.4000113.1S65S65-L67 PolarHBondContact O-N 2.91Å
68L50.2Low58.8Low92 Ų92124.9 Ų124.948%0.48261%0.613SS.*THydrogen-bonded Turntrans-102.11.3-174.2-75.2159.2000114.8L66L66-L68 PolarHBondContact O-N 3.41Å
69R43.7Very low57.3Low183 Ų183127.1 Ų127.169%0.69162%0.622SS**SBendtrans-94.83.6178.4-82.8-160.8-141.4-117.5-1.5115.4L66L66-R69 HydrophobicContact CD1-CG 3.85Å; L66-R69 HydrophobicContact CD2-CB 3.89Å; L66-R69 HydrophobicContact CD2-CG 3.82Å; L66-R69 HydrophobicContact CG-CB 4.06Å; L66-R69 HydrophobicContact CG-CG 3.87Å
70Y38.5Very low55.9Low218 Ų218129.9 Ų129.986%0.85562%0.622SS**SBendtrans-98.83.6-172.9-116.3-84.9000116.1
71H36.6Very low54.4Low148 Ų148128.6 Ų128.669%0.68562%0.621SS**  trans-12635.8179.2-76.6-4.1000113.8
72M31.7Very low52.8Low169 Ų169133.1 Ų133.183%0.83364%0.635SS**  trans-10264.9164.4-69.7-85.8-63.200108.8
73E38.5Very low50.4Low265 Ų265136.2 Ų136.2100%1.23865%0.646SS**  trans-131.40149.9-76.2-169.6152.900107.4

Retrieved 73 of 73 residues in 45.5 ms (Link to these results)