A0A059U2V6_CAPHI Loading...

Beta-defensin

Has antibacterial activity.

AlphaFold DB , UniProt , Accession A0A059U2V6, Species CAPHI (Capra hircus, Goat), Gene LOC106502770, Length 95 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M58.9Low61.3Low207 Ų207128.8 Ų128.8100%1.0265%0.648SS**  027.30-56.1-59.7-171.500114.2
2R61.4Low61.4Low218 Ų218125.6 Ų125.682%0.82364%0.639SS**  trans-115.7-28.3178.4-68.5-177.6175.2172.9-1.1113.4L4R2-L4 PolarHBondContact O-N 3.33Å
3L59.2Low61.2Low142 Ų142127 Ų12774%0.74364%0.639SS**Hα-helixtrans-63.3-38.8175.4-114.382.8000112.9L5 L6 T7L3-L5 VanDerWaalsContact C-N 3.27Å; L3-L5 PolarHBondContact O-N 3.49Å; L3-L6 PolarHBondContact O-N 3.15Å; L3-T7 PolarHBondContact O-N 3.18Å; L3-T7 VanDerWaalsContact O-N 3.15Å
4L64.2Low60.8Low107 Ų107125.4 Ų125.456%0.5663%0.632SS**Hα-helixtrans-62.8-35.1-177-66.6172.6000112.3R2 T7 F8R2-L4 PolarHBondContact O-N 3.33Å; L4-T7 WeakPolarHBondContact CA-OG1 3.46Å; L4-T7 PolarHBondContact O-N 3.47Å; L4-T7 PolarHBondContact O-OG1 3.36Å; L4-F8 VanDerWaalsContact O-CD2 3.28Å; L4-F8 WeakPolarHBondContact O-CD2 3.18Å; L4-F8 PolarHBondContact O-N 3.46Å
5L62.3Low60.7Low124 Ų124122.7 Ų122.765%0.64963%0.627SS**Hα-helixtrans-68.9-36.6178.6-65.2174.1000111.5L3 F8 T9L3-L5 VanDerWaalsContact C-N 3.27Å; L3-L5 PolarHBondContact O-N 3.49Å; L5-F8 PolarHBondContact O-N 3.26Å; L5-T9 PolarHBondContact O-N 3.45Å
6L60.1Low60.3Low118 Ų118123.5 Ų123.562%0.61863%0.627SS**Hα-helixtrans-70.9-33.2177.3-68.6176000112.5L3 T9 V10L3-L6 PolarHBondContact O-N 3.15Å; L6-T9 PolarHBondContact O-OG1 3.15Å; L6-V10 WeakPolarHBondContact O-CG2 3.44Å; L6-V10 PolarHBondContact O-N 3.47Å
7T61.4Low60Low69 Ų69122.9 Ų122.942%0.42363%0.63SS.*Hα-helixtrans-68.9-36.7175.950.70000111.8L3 L4 V10 L11L3-T7 PolarHBondContact O-N 3.18Å; L3-T7 VanDerWaalsContact O-N 3.15Å; L4-T7 WeakPolarHBondContact CA-OG1 3.46Å; L4-T7 PolarHBondContact O-N 3.47Å; L4-T7 PolarHBondContact O-OG1 3.36Å; T7-V10 PolarHBondContact O-N 2.97Å; T7-L11 WeakPolarHBondContact O-CD1 3.39Å; T7-L11 PolarHBondContact O-N 2.8Å; T7-L11 VanDerWaalsContact O-N 3.15Å
8F61.1Low59.5Low140 Ų140120.9 Ų120.961%0.61463%0.625SS**Hα-helixtrans-65.9-39.8178.1-92.3-71.3000113L4 L5 V10 L11 V12L4-F8 VanDerWaalsContact O-CD2 3.28Å; L4-F8 WeakPolarHBondContact O-CD2 3.18Å; L4-F8 PolarHBondContact O-N 3.46Å; L5-F8 PolarHBondContact O-N 3.26Å; F8-V10 VanDerWaalsContact C-N 3.33Å; F8-V10 PolarHBondContact O-N 3.11Å; F8-L11 PolarHBondContact O-N 3.24Å; F8-V12 VanDerWaalsContact O-CG2 3.31Å; F8-V12 WeakPolarHBondContact O-CG2 3.35Å; F8-V12 PolarHBondContact O-N 3.45Å; F8-V12 VanDerWaalsContact O-N 3.11Å
9T61.8Low58.9Low83 Ų83121.2 Ų121.251%0.50964%0.636SS.*Hα-helixtrans-66-36.1179.554.60000112.4L5 L6 F13L5-T9 PolarHBondContact O-N 3.45Å; L6-T9 PolarHBondContact O-OG1 3.15Å; T9-F13 PolarHBondContact O-N 3.38Å
10V62.6Low58.5Low87 Ų87119.1 Ų119.153%0.52764%0.636SS.*Hα-helixtrans-69.6-43.4176.8176.70000111.4L6 T7 F8 V12 F13 L14L6-V10 WeakPolarHBondContact O-CG2 3.44Å; L6-V10 PolarHBondContact O-N 3.47Å; T7-V10 PolarHBondContact O-N 2.97Å; F8-V10 VanDerWaalsContact C-N 3.33Å; F8-V10 PolarHBondContact O-N 3.11Å; V10-V12 VanDerWaalsContact C-N 3.3Å; V10-V12 PolarHBondContact O-N 3.26Å; V10-F13 PolarHBondContact O-N 3.41Å; V10-L14 HydrophobicContact CG1-CD1 3.95Å; V10-L14 WeakPolarHBondContact O-CD1 3.31Å; V10-L14 WeakPolarHBondContact O-CG 3.03Å; V10-L14 PolarHBondContact O-N 3.16Å; V10-L14 VanDerWaalsContact O-N 3.16Å
11L61.7Low58.1Low122 Ų122124.2 Ų124.264%0.63965%0.648SS**Hα-helixtrans-63.5-32176.7-94106.1000113.6T7 F8 P15T7-L11 WeakPolarHBondContact O-CD1 3.39Å; T7-L11 PolarHBondContact O-N 2.8Å; T7-L11 VanDerWaalsContact O-N 3.15Å; F8-L11 PolarHBondContact O-N 3.24Å; L11-P15 WeakPolarHBondContact O-CD 3.28Å
12V62.3Low57.7Low90 Ų90117.4 Ų117.455%0.54563%0.631SS.*Hα-helixtrans-77.5-25.4177.6172.30000112.4F8 V10 P15F8-V12 VanDerWaalsContact O-CG2 3.31Å; F8-V12 WeakPolarHBondContact O-CG2 3.35Å; F8-V12 PolarHBondContact O-N 3.45Å; F8-V12 VanDerWaalsContact O-N 3.11Å; V10-V12 VanDerWaalsContact C-N 3.3Å; V10-V12 PolarHBondContact O-N 3.26Å; V12-P15 WeakPolarHBondContact O-CD 3.35Å
13F58.1Low57.3Low144 Ų144110.1 Ų110.163%0.63262%0.624SS**Hα-helixtrans-82.8-34.2178.7-115.8-95.7000113.7T9 V10 Q16T9-F13 PolarHBondContact O-N 3.38Å; V10-F13 PolarHBondContact O-N 3.41Å; F13-Q16 PolarHBondContact O-N 3.24Å
14L56.3Low57.4Low105 Ų105110.6 Ų110.655%0.5562%0.616SS.*G310 helixtrans-54.4-42.1179-80.4155.6000115.4V10 Q16 V17V10-L14 HydrophobicContact CG1-CD1 3.95Å; V10-L14 WeakPolarHBondContact O-CD1 3.31Å; V10-L14 WeakPolarHBondContact O-CG 3.03Å; V10-L14 PolarHBondContact O-N 3.16Å; V10-L14 VanDerWaalsContact O-N 3.16Å; L14-Q16 PolarHBondContact O-N 3.26Å; L14-V17 WeakPolarHBondContact O-CG2 3.3Å
15P59Low57.9Low84 Ų84113.3 Ų113.355%0.54562%0.623SS.*G310 helixtrans-72.1-11.7-177.824.1-32.7000114.4L11 V12L11-P15 WeakPolarHBondContact O-CD 3.28Å; V12-P15 WeakPolarHBondContact O-CD 3.35Å
16Q54.7Low58.9Low136 Ų136115.6 Ų115.664%0.63662%0.623SS**G310 helixtrans-81.5-19.8-177.3-55.7-171.624.700113.5F13 L14F13-Q16 PolarHBondContact O-N 3.24Å; L14-Q16 PolarHBondContact O-N 3.26Å
17V54.2Low60.1Low113 Ų113111 Ų11169%0.68560%0.6SS**SBendtrans-97-5.7-174.9-63.60000114.2L14 P19L14-V17 WeakPolarHBondContact O-CG2 3.3Å; V17-P19 VanDerWaalsContact O-CD 3.3Å; V17-P19 WeakPolarHBondContact O-CD 3.43Å
18T50.9Low61.1Low87 Ų87112 Ų11253%0.53460%0.597SS.*  trans-105.1100.8168.454.40000109.2A20T18-A20 PolarHBondContact O-N 2.74Å
19P48.2Very low62.1Low127 Ų127112.1 Ų112.183%0.82560%0.603SS**  trans-72.562.5163.532.1-32.3000108V17 Y21V17-P19 VanDerWaalsContact O-CD 3.3Å; V17-P19 WeakPolarHBondContact O-CD 3.43Å; P19-Y21 VanDerWaalsContact C-N 3.3Å
20A51.6Low63Low78 Ų78113.2 Ų113.265%0.64561%0.606SS**  trans-82.2-10.8-176.900000112.3T18T18-A20 PolarHBondContact O-N 2.74Å
21Y50.6Low64Low228 Ų228111.9 Ų111.989%0.89460%0.601SS**  trans-140.833.7-171.4-115.1-98.3000114.2P19 G23P19-Y21 VanDerWaalsContact C-N 3.3Å; Y21-G23 PolarHBondContact O-N 3.47Å; Y21-G23 VanDerWaalsContact O-N 3.15Å
22G49.1Very low65.2Low64 Ų64106.2 Ų106.266%0.6657%0.572SS**SBendtrans-75.796.7159.300000108.1R24G22-R24 PolarHBondContact O-N 3.09Å
23G53.3Low66.4Low65 Ų65108.1 Ų108.167%0.6757%0.569SS**  trans-33.9115.4-177.200000111.5Y21 K25Y21-G23 PolarHBondContact O-N 3.47Å; Y21-G23 VanDerWaalsContact O-N 3.15Å; G23-K25 PolarHBondContact O-N 3.15Å
24R62.1Low67.8Low151 Ų151101.8 Ų101.857%0.5754%0.543SS*.  trans-49.5109.4-173.4-75.7178.4-179.9168-1108.2G22 R26 C34 K35G22-R24 PolarHBondContact O-N 3.09Å; R24-R26 PolarHBondContact O-N 3.07Å; R24-R26 VanDerWaalsContact O-N 3.15Å; R24-C34 WeakPolarHBondContact CD-O 3.03Å; R24-C34 WeakPolarHBondContact CG-O 3.36Å; R24-K35 VanDerWaalsContact NH1-CE 3.31Å
25K74.4Confident69.2Low165 Ų16598.1 Ų98.172%0.71752%0.522SS*.  trans-53.3126.5-178.3-71.8-173.1178.4-178.80107.7G23 C34G23-K25 PolarHBondContact O-N 3.15Å; K25-C34 PolarHBondContact O-N 2.78Å; K25-C34 VanDerWaalsContact O-N 3.11Å; K25-C34 PolarHBondContact O-SG 3.42Å
26R82.6Confident70.5Confident171 Ų171102.7 Ų102.765%0.64553%0.534SS*.EExtended strand (participates in β ladder)trans-68.3144.9173.5-66.7179.9-179.7138.5-6.4108R24 N30 G32R24-R26 PolarHBondContact O-N 3.07Å; R24-R26 VanDerWaalsContact O-N 3.15Å; R26-N30 VanDerWaalsContact CB-OD1 3.24Å; R26-N30 WeakPolarHBondContact CB-OD1 3.38Å; R26-N30 WeakPolarHBondContact CD-OD1 3.05Å; R26-G32 CarbonylContact C-O 3.48Å; R26-G32 VanDerWaalsContact CA-O 3.26Å; R26-G32 WeakPolarHBondContact CA-O 3.41Å
27C85.3Confident71.9Confident21 Ų21104.9 Ų104.914%0.14254%0.541CS..EExtended strand (participates in β ladder)trans-132.3174.6-18061.90000108.3N30 S31 G32 R33 C54C27-N30 PolarHBondContact O-N 3.09Å; C27-S31 PolarHBondContact O-N 3.28Å; C27-G32 PolarHBondContact N-O 3.03Å; C27-G32 WeakPolarHBondContact O-CA 3.03Å; C27-G32 PolarHBondContact O-N 3.04Å; C27-R33 PolarHBondContact SG-N 2.87Å; C27-C54 HydrophobicContact CB-CB 3.83Å; C27-C54 WeakPolarHBondContact CB-SG 3.26Å; C27-C54 WeakPolarHBondContact SG-CA 3.43Å; C27-C54 WeakPolarHBondContact SG-CB 3.19Å; C27-C54 CovalentContact SG-SG 2.02Å; C27-C54 PolarHBondContact SG-SG 2.95Å
28W83.4Confident73.4Confident92 Ų92101.1 Ų101.135%0.34852%0.519SS..THydrogen-bonded Turntrans51.664.5177.9-162.6-101.9000113.5N30 S31 R45 V56W28-N30 VanDerWaalsContact C-N 3.26Å; W28-N30 PolarHBondContact O-N 2.03Å; W28-S31 WeakPolarHBondContact O-CB 3.26Å; W28-S31 PolarHBondContact O-N 2.92Å; W28-S31 PolarHBondContact O-OG 3.35Å; W28-R45 HydrophobicContact CD2-CB 4.21Å; W28-R45 HydrophobicContact CD2-CG 4.33Å; W28-R45 HydrophobicContact CE3-CB 3.88Å; W28-R45 HydrophobicContact CE3-CG 4.39Å; W28-R45 HydrophobicContact CZ2-CG 4.49Å; W28-R45 HydrophobicContact CZ3-CB 4.1Å; W28-V56 HydrophobicContact CB-CG2 3.7Å; W28-V56 HydrophobicContact CG-CG2 3.79Å
29N82.5Confident75.1Confident141 Ų14199 Ų9975%0.75451%0.511SS*.THydrogen-bonded Turntrans47.346.2-177.3-162.444.5000113.8S31N29-S31 PolarHBondContact O-N 2.82Å; N29-S31 VanDerWaalsContact O-N 3.08Å; N29-S31 PolarHBondContact O-OG 2.74Å
30N80.1Confident77Confident106 Ų10697.9 Ų97.957%0.56751%0.512SS*.THydrogen-bonded Turntrans68.8-3.3-178.4-126.937.1000116.2R26 C27 W28R26-N30 VanDerWaalsContact CB-OD1 3.24Å; R26-N30 WeakPolarHBondContact CB-OD1 3.38Å; R26-N30 WeakPolarHBondContact CD-OD1 3.05Å; C27-N30 PolarHBondContact O-N 3.09Å; W28-N30 VanDerWaalsContact C-N 3.26Å; W28-N30 PolarHBondContact O-N 2.03Å
31S82.9Confident78.5Confident60 Ų6098.7 Ų98.742%0.4251%0.506SS..THydrogen-bonded Turntrans-84.2-12.7-179.5-39.80000113.3C27 W28 N29C27-S31 PolarHBondContact O-N 3.28Å; W28-S31 WeakPolarHBondContact O-CB 3.26Å; W28-S31 PolarHBondContact O-N 2.92Å; W28-S31 PolarHBondContact O-OG 3.35Å; N29-S31 PolarHBondContact O-N 2.82Å; N29-S31 VanDerWaalsContact O-N 3.08Å; N29-S31 PolarHBondContact O-OG 2.74Å
32G87.4Confident80.4Confident3 Ų389 Ų893%0.03147%0.469CS..EExtended strand (participates in β ladder)trans-119.2165.6-179.300000114R26 C27 C55R26-G32 CarbonylContact C-O 3.48Å; R26-G32 VanDerWaalsContact CA-O 3.26Å; R26-G32 WeakPolarHBondContact CA-O 3.41Å; C27-G32 PolarHBondContact N-O 3.03Å; C27-G32 WeakPolarHBondContact O-CA 3.03Å; C27-G32 PolarHBondContact O-N 3.04Å; G32-C55 CarbonylContact C-O 3.57Å; G32-C55 WeakPolarHBondContact CA-O 3.24Å
33R88.1Confident82.2Confident129 Ų12988.5 Ų88.549%0.48745%0.453SS..EExtended strand (participates in β ladder)trans-127.7138173.3-70.4-177-69.9-158.7-3.9111C27 K35 C55C27-R33 PolarHBondContact SG-N 2.87Å; R33-K35 PolarHBondContact O-N 2.93Å; R33-C55 PolarHBondContact N-O 3.1Å; R33-C55 PolarHBondContact O-N 2.84Å
34C87.7Confident84Confident11 Ų1190.4 Ų90.47%0.07445%0.447CS..EExtended strand (participates in β ladder)trans-71.6123.2169.7-60.90000110.3R24 K25 C48 Q52 S53R24-C34 WeakPolarHBondContact CD-O 3.03Å; R24-C34 WeakPolarHBondContact CG-O 3.36Å; K25-C34 PolarHBondContact O-N 2.78Å; K25-C34 VanDerWaalsContact O-N 3.11Å; K25-C34 PolarHBondContact O-SG 3.42Å; C34-C48 HydrophobicContact CB-CB 3.79Å; C34-C48 WeakPolarHBondContact CB-SG 3.48Å; C34-C48 WeakPolarHBondContact SG-CB 3.23Å; C34-C48 CovalentContact SG-SG 2.04Å; C34-C48 PolarHBondContact SG-SG 3.11Å; C34-Q52 HydrophobicContact CB-CB 4.41Å; C34-Q52 PolarHBondContact O-OE1 3.5Å; C34-S53 WeakPolarHBondContact CA-O 3.01Å
35K85.8Confident85.1Confident28 Ų2887.8 Ų87.812%0.12244%0.437CS..EExtended strand (participates in β ladder)trans-138.8158.8175.9-67.1172.3167.3171.50110.1R24 R33 K37 E42 Q52 S53 C55R24-K35 VanDerWaalsContact NH1-CE 3.31Å; R33-K35 PolarHBondContact O-N 2.93Å; K35-K37 WeakPolarHBondContact CB-O 3.06Å; K35-E42 IonicContact NZ-OE1 2.78Å; K35-E42 PolarHBondContact NZ-OE1 3.22Å; K35-E42 IonicContact NZ-OE2 2.84Å; K35-E42 PolarHBondContact NZ-OE2 2.79Å; K35-Q52 CarbonylContact O-C 3.57Å; K35-Q52 WeakPolarHBondContact O-CB 3.49Å; K35-S53 PolarHBondContact N-O 2.91Å; K35-S53 PolarHBondContact O-N 2.02Å; K35-C55 HydrophobicContact CD-CB 4.34Å
36K85.3Confident85.7Confident180 Ų18082.1 Ų82.178%0.78342%0.421SS*.SBendtrans-69.2-34.5172.3-70.6-176.6178.7179.90112.8Q52K36-Q52 HydrophobicContact CG-CG 4.22Å
37K84.6Confident85.8Confident182 Ų18279.5 Ų79.579%0.79142%0.423SS*.SBendtrans-137.7138.4175.4-66.8-173.5177.6-176.70108.3K35K35-K37 WeakPolarHBondContact CB-O 3.06Å
38C86.5Confident85.9Confident34 Ų3479.5 Ų79.523%0.2342%0.423CS..  trans-81.3153.2172.7-58.30000110.4E42 I44 C55C38-E42 HydrophobicContact CB-CB 4Å; C38-I44 HydrophobicContact CB-CG1 4.32Å; C38-I44 WeakPolarHBondContact SG-CG1 3.4Å; C38-C55 WeakPolarHBondContact CA-SG 2.84Å; C38-C55 HydrophobicContact CB-CB 3.75Å; C38-C55 WeakPolarHBondContact CB-SG 3.37Å; C38-C55 VanDerWaalsContact SG-CA 3.54Å; C38-C55 WeakPolarHBondContact SG-CB 3.26Å; C38-C55 CovalentContact SG-SG 2.03Å; C38-C55 PolarHBondContact SG-SG 3.14Å
39A86.5Confident85.7Confident42 Ų4285 Ų8535%0.34745%0.45SS..  trans-72.3165.1169.300000110.6D41 E42A39-D41 WeakPolarHBondContact CB-OD1 3.47Å; A39-D41 PolarHBondContact O-N 3.29Å; A39-E42 HydrophobicContact CB-CG 4.19Å; A39-E42 PolarHBondContact N-OE2 2.04Å; A39-E42 PolarHBondContact O-N 3.15Å; A39-E42 VanDerWaalsContact O-N 3.09Å
40A86.5Confident85.5Confident104 Ų10484.2 Ų84.286%0.8645%0.446SS*.THydrogen-bonded Turntrans-64.4-26.2-177.500000113.1E42 Q58A40-E42 VanDerWaalsContact C-N 3.35Å; A40-Q58 PolarHBondContact O-NE2 3.31Å
41D85Confident85.5Confident95 Ų9590.7 Ų90.751%0.50846%0.462SS..THydrogen-bonded Turntrans-88.61.917765-52.8000113.6A39 Q58A39-D41 WeakPolarHBondContact CB-OD1 3.47Å; A39-D41 PolarHBondContact O-N 3.29Å; D41-Q58 WeakPolarHBondContact O-CG 3.34Å; D41-Q58 PolarHBondContact O-N 2.85Å; D41-Q58 VanDerWaalsContact O-N 3.11Å
42E88.5Confident85.6Confident25 Ų2589.9 Ų89.912%0.11745%0.451CS..EExtended strand (participates in β ladder)trans-110.5145.8180-69176.2155.600111K35 C38 A39 A40 C55 V56K35-E42 IonicContact NZ-OE1 2.78Å; K35-E42 PolarHBondContact NZ-OE1 3.22Å; K35-E42 IonicContact NZ-OE2 2.84Å; K35-E42 PolarHBondContact NZ-OE2 2.79Å; C38-E42 HydrophobicContact CB-CB 4Å; A39-E42 HydrophobicContact CB-CG 4.19Å; A39-E42 PolarHBondContact N-OE2 2.04Å; A39-E42 PolarHBondContact O-N 3.15Å; A39-E42 VanDerWaalsContact O-N 3.09Å; A40-E42 VanDerWaalsContact C-N 3.35Å; E42-C55 HydrophobicContact CB-CB 4.05Å; E42-C55 HydrophobicContact CG-CB 4.37Å; E42-C55 VanDerWaalsContact OE2-CB 3.26Å; E42-C55 WeakPolarHBondContact OE2-CB 3.07Å; E42-V56 CarbonylContact C-O 3.52Å; E42-V56 VanDerWaalsContact CA-O 3.23Å; E42-V56 WeakPolarHBondContact CA-O 3.48Å
43V88.7Confident85.7Confident54 Ų5491 Ų9133%0.32746%0.459SS..EExtended strand (participates in β ladder)trans-105.8141.8173.7-164.10000110.2V56 Q58V43-V56 PolarHBondContact N-O 3.07Å; V43-V56 PolarHBondContact O-N 2.99Å; V43-Q58 HydrophobicContact CG2-CB 4.32Å; V43-Q58 HydrophobicContact CG2-CG 3.22Å
44I89.4Confident85.7Confident105 Ų10584.9 Ų84.954%0.53844%0.436SS..EExtended strand (participates in β ladder)trans-79.9116.5171.2-59.3166.3000108.6C38 C54C38-I44 HydrophobicContact CB-CG1 4.32Å; C38-I44 WeakPolarHBondContact SG-CG1 3.4Å; I44-C54 WeakPolarHBondContact CA-O 2.99Å
45R87Confident85.8Confident96 Ų9684.4 Ų84.436%0.36243%0.433SS..EExtended strand (participates in β ladder)trans-105.2-29.9177.3-78.2-69.8-170.2170.83.7114.3W28 C54 V56 E65W28-R45 HydrophobicContact CD2-CB 4.21Å; W28-R45 HydrophobicContact CD2-CG 4.33Å; W28-R45 HydrophobicContact CE3-CB 3.88Å; W28-R45 HydrophobicContact CE3-CG 4.39Å; W28-R45 HydrophobicContact CZ2-CG 4.49Å; W28-R45 HydrophobicContact CZ3-CB 4.1Å; R45-C54 PolarHBondContact N-O 3.08Å; R45-V56 HydrophobicContact CB-CG2 4.21Å; R45-V56 HydrophobicContact CG-CG2 4.04Å; R45-E65 IonicContact CZ-OE1 3.81Å; R45-E65 IonicContact NH2-OE1 2.72Å; R45-E65 PolarHBondContact NH2-OE1 3Å
46A85.9Confident86Confident46 Ų4683 Ų8338%0.3843%0.427SS..EExtended strand (participates in β ladder)trans-156.3170.1-176.900000111.3C54A46-C54 HydrophobicContact CB-CB 4.04Å; A46-C54 VanDerWaalsContact O-CB 3.3Å; A46-C54 WeakPolarHBondContact O-CB 3.38Å; A46-C54 PolarHBondContact O-N 3.39Å
47V85.7Confident86Confident116 Ų11676.5 Ų76.570%0.70340%0.403SS*.EExtended strand (participates in β ladder)trans-103.3127.4171.8-176.60000109.2Q52V47-Q52 CarbonylContact C-O 3.56Å; V47-Q52 WeakPolarHBondContact CA-O 3.3Å
48C85.9Confident85.8Confident21 Ų2171.6 Ų71.614%0.14238%0.383CS..EExtended strand (participates in β ladder)trans-80.8158.4174.2-59.10000111.3C34 N50 R51 Q52C34-C48 HydrophobicContact CB-CB 3.79Å; C34-C48 WeakPolarHBondContact CB-SG 3.48Å; C34-C48 WeakPolarHBondContact SG-CB 3.23Å; C34-C48 CovalentContact SG-SG 2.04Å; C34-C48 PolarHBondContact SG-SG 3.11Å; C48-N50 PolarHBondContact O-N 2.77Å; C48-R51 PolarHBondContact O-N 3.11Å; C48-Q52 HydrophobicContact CB-CB 4.18Å; C48-Q52 PolarHBondContact N-O 2.87Å
49K80.9Confident85.4Confident208 Ų20876.2 Ų76.290%0.90441%0.405SS*.THydrogen-bonded Turntrans-49.9-23.8-176.3-72.1-174174.5-174.40116
50N77.3Confident84.6Confident124 Ų12476 Ų7666%0.66340%0.403SS*.THydrogen-bonded Turntrans-97.828.8-179.8-67.4-6.9000113.7C48 Q52C48-N50 PolarHBondContact O-N 2.77Å; N50-Q52 HydrophobicContact CB-CG 4.25Å; N50-Q52 PolarHBondContact O-N 3.42Å; N50-Q52 VanDerWaalsContact O-N 3.09Å
51R79.7Confident83.9Confident241 Ų24171.6 Ų71.691%0.90937%0.366SS*.THydrogen-bonded Turntrans53.129.2-171.8-60.9176.2175.8-116.80.2112.7C48C48-R51 PolarHBondContact O-N 3.11Å
52Q85.1Confident83.2Confident43 Ų4373 Ų7320%0.20137%0.368CS..EExtended strand (participates in β ladder)trans-96151.9176.4-74.6-179.742.500109.2C34 K35 K36 V47 C48 N50C34-Q52 HydrophobicContact CB-CB 4.41Å; C34-Q52 PolarHBondContact O-OE1 3.5Å; K35-Q52 CarbonylContact O-C 3.57Å; K35-Q52 WeakPolarHBondContact O-CB 3.49Å; K36-Q52 HydrophobicContact CG-CG 4.22Å; V47-Q52 CarbonylContact C-O 3.56Å; V47-Q52 WeakPolarHBondContact CA-O 3.3Å; C48-Q52 HydrophobicContact CB-CB 4.18Å; C48-Q52 PolarHBondContact N-O 2.87Å; N50-Q52 HydrophobicContact CB-CG 4.25Å; N50-Q52 PolarHBondContact O-N 3.42Å; N50-Q52 VanDerWaalsContact O-N 3.09Å
53S88.9Confident82.3Confident26 Ų2676 Ų7618%0.18239%0.388CS..EExtended strand (participates in β ladder)trans-80.9135.1174.6-36.80000109.7C34 K35 C55C34-S53 WeakPolarHBondContact CA-O 3.01Å; K35-S53 PolarHBondContact N-O 2.91Å; K35-S53 PolarHBondContact O-N 2.02Å; S53-C55 PolarHBondContact O-N 3.29Å
54C89.3Confident81.2Confident1 Ų177.7 Ų77.71%0.00739%0.391CS..EExtended strand (participates in β ladder)trans-78.7105.9164.4176.60000108.3C27 I44 R45 A46C27-C54 HydrophobicContact CB-CB 3.83Å; C27-C54 WeakPolarHBondContact CB-SG 3.26Å; C27-C54 WeakPolarHBondContact SG-CA 3.43Å; C27-C54 WeakPolarHBondContact SG-CB 3.19Å; C27-C54 CovalentContact SG-SG 2.02Å; C27-C54 PolarHBondContact SG-SG 2.95Å; I44-C54 WeakPolarHBondContact CA-O 2.99Å; R45-C54 PolarHBondContact N-O 3.08Å; A46-C54 HydrophobicContact CB-CB 4.04Å; A46-C54 VanDerWaalsContact O-CB 3.3Å; A46-C54 WeakPolarHBondContact O-CB 3.38Å; A46-C54 PolarHBondContact O-N 3.39Å
55C89.9Confident80.1Confident1 Ų177.3 Ų77.31%0.00739%0.387CS..EExtended strand (participates in β ladder)trans-96.3125.3-179.4-51.20000109.4G32 R33 K35 C38 E42 S53G32-C55 CarbonylContact C-O 3.57Å; G32-C55 WeakPolarHBondContact CA-O 3.24Å; R33-C55 PolarHBondContact N-O 3.1Å; R33-C55 PolarHBondContact O-N 2.84Å; K35-C55 HydrophobicContact CD-CB 4.34Å; C38-C55 WeakPolarHBondContact CA-SG 2.84Å; C38-C55 HydrophobicContact CB-CB 3.75Å; C38-C55 WeakPolarHBondContact CB-SG 3.37Å; C38-C55 VanDerWaalsContact SG-CA 3.54Å; C38-C55 WeakPolarHBondContact SG-CB 3.26Å; C38-C55 CovalentContact SG-SG 2.03Å; C38-C55 PolarHBondContact SG-SG 3.14Å; E42-C55 HydrophobicContact CB-CB 4.05Å; E42-C55 HydrophobicContact CG-CB 4.37Å; E42-C55 VanDerWaalsContact OE2-CB 3.26Å; E42-C55 WeakPolarHBondContact OE2-CB 3.07Å; S53-C55 PolarHBondContact O-N 3.29Å
56V89.6Confident78.8Confident0 Ų077.2 Ų77.20%040%0.396CS..EExtended strand (participates in β ladder)trans-121139.6178.2-170.70000108W28 E42 V43 R45 Q58 A60 V61W28-V56 HydrophobicContact CB-CG2 3.7Å; W28-V56 HydrophobicContact CG-CG2 3.79Å; E42-V56 CarbonylContact C-O 3.52Å; E42-V56 VanDerWaalsContact CA-O 3.23Å; E42-V56 WeakPolarHBondContact CA-O 3.48Å; V43-V56 PolarHBondContact N-O 3.07Å; V43-V56 PolarHBondContact O-N 2.99Å; R45-V56 HydrophobicContact CB-CG2 4.21Å; R45-V56 HydrophobicContact CG-CG2 4.04Å; V56-Q58 PolarHBondContact O-N 2.92Å; V56-A60 HydrophobicContact CG1-CB 4.29Å; V56-V61 HydrophobicContact CB-CG2 4.08Å; V56-V61 HydrophobicContact CG1-CG2 3.73Å
57S86.1Confident77.6Confident42 Ų4280.9 Ų80.929%0.29441%0.409SS..EExtended strand (participates in β ladder)trans-60.8134.7174.1177.30000110.1L59 A60 V61S57-L59 PolarHBondContact O-N 2.88Å; S57-A60 PolarHBondContact O-N 3.45Å; S57-A60 VanDerWaalsContact O-N 3.08Å; S57-V61 PolarHBondContact O-N 3.19Å; S57-V61 VanDerWaalsContact O-N 3.14Å
58Q79.8Confident76.1Confident79 Ų7980.5 Ų80.537%0.36941%0.406SS..Hα-helixtrans-53-42.6176-77.7174.940.300111.6A40 D41 V43 V56 A60 V61 F62A40-Q58 PolarHBondContact O-NE2 3.31Å; D41-Q58 WeakPolarHBondContact O-CG 3.34Å; D41-Q58 PolarHBondContact O-N 2.85Å; D41-Q58 VanDerWaalsContact O-N 3.11Å; V43-Q58 HydrophobicContact CG2-CB 4.32Å; V43-Q58 HydrophobicContact CG2-CG 3.22Å; V56-Q58 PolarHBondContact O-N 2.92Å; Q58-A60 VanDerWaalsContact C-N 3.34Å; Q58-A60 PolarHBondContact O-N 3.08Å; Q58-V61 WeakPolarHBondContact O-CB 3.42Å; Q58-V61 PolarHBondContact O-N 3.25Å; Q58-V61 VanDerWaalsContact O-N 3.1Å; Q58-F62 HydrophobicContact CB-CE2 4.43Å; Q58-F62 WeakPolarHBondContact O-CD2 3.33Å; Q58-F62 PolarHBondContact O-N 3.43Å
59L77.4Confident74.5Confident131 Ų13184 Ų8469%0.68643%0.432SS*.Hα-helixtrans-60.8-41.1177.9-67.4170.2000112.7S57 V61 F62 V63S57-L59 PolarHBondContact O-N 2.88Å; L59-V61 VanDerWaalsContact C-N 3.26Å; L59-V61 PolarHBondContact O-N 2.72Å; L59-F62 PolarHBondContact O-N 3.33Å; L59-V63 WeakPolarHBondContact O-CG2 3.13Å; L59-V63 PolarHBondContact O-N 3.29Å
60A70.6Confident73Confident38 Ų3877.3 Ų77.331%0.31441%0.411SS..Hα-helixtrans-68.1-28.7177.700000112.5V56 S57 Q58 K64V56-A60 HydrophobicContact CG1-CB 4.29Å; S57-A60 PolarHBondContact O-N 3.45Å; S57-A60 VanDerWaalsContact O-N 3.08Å; Q58-A60 VanDerWaalsContact C-N 3.34Å; Q58-A60 PolarHBondContact O-N 3.08Å; A60-K64 WeakPolarHBondContact O-CB 3.36Å; A60-K64 PolarHBondContact O-N 2.98Å
61V70.4Confident71.4Confident12 Ų1276.2 Ų76.27%0.07341%0.411CS..Hα-helixtrans-70.9-49.8172.81680000110.6V56 S57 Q58 L59 V63 K64 E65V56-V61 HydrophobicContact CB-CG2 4.08Å; V56-V61 HydrophobicContact CG1-CG2 3.73Å; S57-V61 PolarHBondContact O-N 3.19Å; S57-V61 VanDerWaalsContact O-N 3.14Å; Q58-V61 WeakPolarHBondContact O-CB 3.42Å; Q58-V61 PolarHBondContact O-N 3.25Å; Q58-V61 VanDerWaalsContact O-N 3.1Å; L59-V61 VanDerWaalsContact C-N 3.26Å; L59-V61 PolarHBondContact O-N 2.72Å; V61-V63 PolarHBondContact O-N 3.49Å; V61-K64 PolarHBondContact O-N 3.35Å; V61-E65 PolarHBondContact O-N 3.21Å
62F70.9Confident69.8Low124 Ų12469.6 Ų69.654%0.54440%0.401SS..Hα-helixtrans-58.8-48.9179.4-80.9-69.8000111.7Q58 L59 K64 E65 T66Q58-F62 HydrophobicContact CB-CE2 4.43Å; Q58-F62 WeakPolarHBondContact O-CD2 3.33Å; Q58-F62 PolarHBondContact O-N 3.43Å; L59-F62 PolarHBondContact O-N 3.33Å; F62-K64 VanDerWaalsContact C-N 3.28Å; F62-K64 PolarHBondContact O-N 2.91Å; F62-E65 PolarHBondContact O-N 3.02Å; F62-E65 VanDerWaalsContact O-N 3.12Å; F62-T66 WeakPolarHBondContact O-CB 3.32Å; F62-T66 PolarHBondContact O-N 2.79Å; F62-T66 PolarHBondContact O-OG1 3.12Å
63V70.5Confident67.5Low88 Ų8873 Ų7353%0.53343%0.425SS..Hα-helixtrans-58.1-42.1177.9172.10000111.3L59 V61 I67L59-V63 WeakPolarHBondContact O-CG2 3.13Å; L59-V63 PolarHBondContact O-N 3.29Å; V61-V63 PolarHBondContact O-N 3.49Å; V63-I67 HydrophobicContact CG1-CD1 3.64Å; V63-I67 HydrophobicContact CG1-CG1 4.47Å; V63-I67 WeakPolarHBondContact O-CB 3.32Å; V63-I67 WeakPolarHBondContact O-CD1 3.37Å; V63-I67 WeakPolarHBondContact O-CG1 3.48Å; V63-I67 PolarHBondContact O-N 2.69Å
64K65.8Low65.7Low90 Ų9078.4 Ų78.439%0.39145%0.452SS..Hα-helixtrans-66.9-39.6178.2-168.8-179.6-178.9-171.30112.1A60 V61 F62 T68A60-K64 WeakPolarHBondContact O-CB 3.36Å; A60-K64 PolarHBondContact O-N 2.98Å; V61-K64 PolarHBondContact O-N 3.35Å; F62-K64 VanDerWaalsContact C-N 3.28Å; F62-K64 PolarHBondContact O-N 2.91Å; K64-T68 WeakPolarHBondContact O-CB 3.15Å; K64-T68 PolarHBondContact O-N 3.4Å; K64-T68 PolarHBondContact O-OG1 3.02Å
65E65.5Low63.1Low97 Ų9780.3 Ų80.345%0.45347%0.472SS..Hα-helixtrans-69.8-41.7177.2-75.2-174.9-176.500111.5R45 V61 F62 I67 T68 S69R45-E65 IonicContact CZ-OE1 3.81Å; R45-E65 IonicContact NH2-OE1 2.72Å; R45-E65 PolarHBondContact NH2-OE1 3Å; V61-E65 PolarHBondContact O-N 3.21Å; F62-E65 PolarHBondContact O-N 3.02Å; F62-E65 VanDerWaalsContact O-N 3.12Å; E65-I67 VanDerWaalsContact C-N 3.31Å; E65-I67 PolarHBondContact O-N 2.72Å; E65-T68 CarbonylContact O-C 3.52Å; E65-T68 PolarHBondContact O-N 3.04Å; E65-S69 VanDerWaalsContact O-CB 3.32Å; E65-S69 WeakPolarHBondContact O-CB 3.43Å; E65-S69 PolarHBondContact O-N 3.38Å; E65-S69 PolarHBondContact O-OG 2.94Å
66T59.7Low60.3Low93 Ų9391.9 Ų91.957%0.57152%0.515SS*.Hα-helixtrans-61.8-38174.6-52.50000112.1F62 T68 S70F62-T66 WeakPolarHBondContact O-CB 3.32Å; F62-T66 PolarHBondContact O-N 2.79Å; F62-T66 PolarHBondContact O-OG1 3.12Å; T66-T68 VanDerWaalsContact C-N 3.32Å; T66-S70 PolarHBondContact O-N 3.29Å
67I61.2Low57.9Low124 Ų12499.6 Ų99.664%0.63655%0.552SS**Hα-helixtrans-71.7-27.7174.9-64.9166.2000111.6V63 E65V63-I67 HydrophobicContact CG1-CD1 3.64Å; V63-I67 HydrophobicContact CG1-CG1 4.47Å; V63-I67 WeakPolarHBondContact O-CB 3.32Å; V63-I67 WeakPolarHBondContact O-CD1 3.37Å; V63-I67 WeakPolarHBondContact O-CG1 3.48Å; V63-I67 PolarHBondContact O-N 2.69Å; E65-I67 VanDerWaalsContact C-N 3.31Å; E65-I67 PolarHBondContact O-N 2.72Å
68T53.8Low56Low107 Ų107107.6 Ų107.666%0.65658%0.584SS**Hα-helixtrans-92-24.8-178.7-51.70000113.1K64 E65 T66K64-T68 WeakPolarHBondContact O-CB 3.15Å; K64-T68 PolarHBondContact O-N 3.4Å; K64-T68 PolarHBondContact O-OG1 3.02Å; E65-T68 CarbonylContact O-C 3.52Å; E65-T68 PolarHBondContact O-N 3.04Å; T66-T68 VanDerWaalsContact C-N 3.32Å
69S51.8Low54.2Low96 Ų96111.6 Ų111.667%0.67160%0.603SS**Hα-helixtrans-87.8-8.9175.368.30000112.8E65E65-S69 VanDerWaalsContact O-CB 3.32Å; E65-S69 WeakPolarHBondContact O-CB 3.43Å; E65-S69 PolarHBondContact O-N 3.38Å; E65-S69 PolarHBondContact O-OG 2.94Å
70S48.7Very low52.7Low66 Ų66109.6 Ų109.646%0.46261%0.605SS.*SBendtrans-74130159.8-169.90000107.9T66 S72T66-S70 PolarHBondContact O-N 3.29Å; S70-S72 PolarHBondContact O-N 2.83Å
71P44Very low51.7Low102 Ų102115.8 Ų115.866%0.66263%0.63SS**  trans-52.8135.7165.1-11.623.4000107.8T73P71-T73 VanDerWaalsContact C-N 3.29Å; P71-T73 PolarHBondContact O-N 3.31Å
72S45.9Very low50.6Low102 Ų102121.1 Ų121.171%0.71366%0.657SS**  trans-57.394.4167-172.10000108.6S70 N74S70-S72 PolarHBondContact O-N 2.83Å; S72-N74 VanDerWaalsContact C-N 3.34Å; S72-N74 PolarHBondContact O-N 3.45Å; S72-N74 PolarHBondContact O-OD1 3.47Å; S72-N74 PolarHBondContact OG-OD1 2.65Å
73T38.4Very low49.4Very low115 Ų115125.8 Ų125.871%0.70667%0.672SS**  trans-92.480.3158.447.30000107.1P71 G75P71-T73 VanDerWaalsContact C-N 3.29Å; P71-T73 PolarHBondContact O-N 3.31Å; T73-G75 VanDerWaalsContact C-N 3.3Å; T73-G75 PolarHBondContact O-N 3.42Å
74N49.6Very low48.4Very low139 Ų139128 Ų12874%0.74368%0.679SS**  trans-66.497.3156.930-71.2000107.7S72S72-N74 VanDerWaalsContact C-N 3.34Å; S72-N74 PolarHBondContact O-N 3.45Å; S72-N74 PolarHBondContact O-OD1 3.47Å; S72-N74 PolarHBondContact OG-OD1 2.65Å
75G35.4Very low47.6Very low41 Ų41128.1 Ų128.142%0.42369%0.687SS.*SBendtrans123.2122.7167.100000114T73T73-G75 VanDerWaalsContact C-N 3.3Å; T73-G75 PolarHBondContact O-N 3.42Å
76W31.5Very low46.7Very low243 Ų243127.4 Ų127.492%0.9269%0.693SS**  trans65.1119.4161.4-34.676.9000112.7
77E38.3Very low46.2Very low163 Ų163128 Ų12876%0.76270%0.696SS**  -163.5141.759.7-88148.392.600110.8E79E77-E79 HydrophobicContact CB-CB 4.18Å; E77-E79 PolarHBondContact O-N 3.39Å; E77-E79 VanDerWaalsContact O-N 3.08Å
78E47.4Very low45.6Very low210 Ų210125.5 Ų125.598%0.98169%0.694SS**  trans-71.724.9167.7-78.317596.600113.2
79E41.1Very low45.5Very low163 Ų163124.2 Ų124.276%0.76269%0.689SS**  trans-121.853.8-159.6-135.7164.6136.600114.4E77E77-E79 HydrophobicContact CB-CB 4.18Å; E77-E79 PolarHBondContact O-N 3.39Å; E77-E79 VanDerWaalsContact O-N 3.08Å
80A46.4Very low45.4Very low88 Ų88125 Ų12573%0.72769%0.69SS**SBendtrans-135.224169.200000113.8
81M49.9Very low45.5Very low169 Ų169126.9 Ų126.983%0.83370%0.703SS**SBendtrans-113.620.4175.9-150.7159.2-103.300113.3
82D46.2Very low45.9Very low123 Ų123127.1 Ų127.166%0.65870%0.703SS**SBendtrans-115.2-15.5177.7-134.6-22.9000114.2
83R45.8Very low46.1Very low223 Ų223132 Ų13284%0.84271%0.707SS**THydrogen-bonded Turntrans-87.5-13.9179.2-72.2-169.8-173.7-167.34.2115.1
84I50.6Low46.7Very low133 Ų133134.7 Ų134.768%0.68272%0.716SS**THydrogen-bonded Turntrans-83.9-28.5-179.9-53177.8000111S86I84-S86 VanDerWaalsContact C-N 3.33Å; I84-S86 PolarHBondContact O-N 3.46Å
85V49Very low46.4Very low94 Ų94141 Ų14157%0.5774%0.741SS**Hα-helixtrans-66.8-32.3178.5167.70000112.2V87V85-V87 PolarHBondContact O-N 3.04Å
86S45.9Very low47Very low82 Ų82146 Ų14657%0.57376%0.757SS**Hα-helixtrans-75.4-22-176.7-55.60000114.7I84I84-S86 VanDerWaalsContact C-N 3.33Å; I84-S86 PolarHBondContact O-N 3.46Å
87V49.8Very low47.8Very low106 Ų106140.8 Ų140.864%0.64275%0.748SS**Hα-helixtrans-83.9-26.7178-179.10000111.6V85 S89V85-V87 PolarHBondContact O-N 3.04Å; V87-S89 VanDerWaalsContact C-N 3.32Å; V87-S89 PolarHBondContact O-N 3.08Å
88A47.4Very low48.3Very low70 Ų70139.6 Ų139.658%0.57975%0.748SS**Hα-helixtrans-72.3-24.1179.800000113.3
89S52.8Low48.4Very low80 Ų80135.5 Ų135.556%0.55973%0.734SS**THydrogen-bonded Turntrans-84.7-14.4-174.8-59.50000114.8V87V87-S89 VanDerWaalsContact C-N 3.32Å; V87-S89 PolarHBondContact O-N 3.08Å
90T49.8Very low48.8Very low113 Ų113133.8 Ų133.869%0.69373%0.732SS**SBendtrans-101-5.7-179440000114.3
91S51.5Low49Very low106 Ų106136.8 Ų136.874%0.74173%0.733SS**SBendtrans-92.46.5179.9-166.90000114.7
92T52.4Low48.9Very low106 Ų106134.5 Ų134.565%0.6573%0.725SS**SBendtrans-117.28-178.649.70000115.2
93Y49.7Very low49.1Very low204 Ų204135.4 Ų135.480%0.873%0.731SS**SBendtrans-128.138.6178.5-74.8-79.3000114
94L50.3Low49.4Very low172 Ų172128.1 Ų128.190%0.90172%0.721SS**  trans-142.171.1161.5-84.9172.2000109.3
95E43.7Very low49.3Very low271 Ų271127.6 Ų127.6100%1.26673%0.725SS**  trans-129.60143.3-81.8-168.1101.100108.1

Retrieved 95 of 95 residues in 34.3 ms (Link to these results)