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Mediator of RNA polymerase II transcription subunit 11

Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors.

AlphaFold DB , UniProt , Accession A0A060WAD6, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene LOC110500353, Length 114 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M61.1Low84.4Confident181 Ų181100.9 Ų100.989%0.89251%0.511SS*.  0-64.90-79.5-172.2-18000113.5N3 D4 R5M1-N3 PolarHBondContact O-N 2.95Å; M1-D4 VanDerWaalsContact CA-OD2 3.3Å; M1-D4 WeakPolarHBondContact CA-OD2 3.48Å; M1-D4 PolarHBondContact N-OD2 3.45Å; M1-D4 PolarHBondContact O-N 2.87Å; M1-R5 PolarHBondContact O-N 3.28Å; M1-R5 VanDerWaalsContact O-N 3.13Å
2A72.4Confident85.5Confident77 Ų7793.3 Ų93.364%0.63647%0.474SS*.Hα-helixtrans-63.3-42.3178.700000112.5R5 L6A2-R5 PolarHBondContact O-N 3.39Å; A2-L6 WeakPolarHBondContact O-CG 3.27Å; A2-L6 PolarHBondContact O-N 3.49Å
3N77.9Confident86.4Confident126 Ų12696.6 Ų96.667%0.67449%0.486SS*.Hα-helixtrans-64.8-40.9177.5-155.8-19.1000112.1M1 R5 L6 R7M1-N3 PolarHBondContact O-N 2.95Å; N3-R5 VanDerWaalsContact C-N 3.3Å; N3-R5 PolarHBondContact O-N 3.36Å; N3-L6 PolarHBondContact O-N 3.18Å; N3-R7 PolarHBondContact O-N 3.21Å
4D81.4Confident87.1Confident86 Ų8696.5 Ų96.546%0.4649%0.488SS..Hα-helixtrans-63.8-35.4176.2-50.1-58.4000112.5M1 R7 A8M1-D4 VanDerWaalsContact CA-OD2 3.3Å; M1-D4 WeakPolarHBondContact CA-OD2 3.48Å; M1-D4 PolarHBondContact N-OD2 3.45Å; M1-D4 PolarHBondContact O-N 2.87Å; D4-R7 PolarHBondContact O-N 3.4Å; D4-A8 PolarHBondContact O-N 2.9Å
5R84.7Confident87.8Confident71 Ų7193.4 Ų93.427%0.26847%0.471SS..Hα-helixtrans-71.3-38.2175.1-73.3-171.5176.6-85.4-6.3112.6M1 A2 N3 R7 A8 L9 Y64M1-R5 PolarHBondContact O-N 3.28Å; M1-R5 VanDerWaalsContact O-N 3.13Å; A2-R5 PolarHBondContact O-N 3.39Å; N3-R5 VanDerWaalsContact C-N 3.3Å; N3-R5 PolarHBondContact O-N 3.36Å; R5-R7 VanDerWaalsContact C-N 3.33Å; R5-A8 PolarHBondContact O-N 2.8Å; R5-L9 WeakPolarHBondContact O-CG 3.44Å; R5-L9 PolarHBondContact O-N 3.43Å; R5-Y64 VanDerWaalsContact CZ-CD2 3.4Å; R5-Y64 VanDerWaalsContact NE-CD1 3.34Å; R5-Y64 VanDerWaalsContact NH1-CB 3.3Å; R5-Y64 VanDerWaalsContact NH1-CG 3.29Å
6L88.8Confident88.4Confident117 Ų11792.1 Ų92.161%0.61347%0.465SS*.Hα-helixtrans-62.2-42.9172.7-73.2171.4000111A2 N3 A8 L9 E10A2-L6 WeakPolarHBondContact O-CG 3.27Å; A2-L6 PolarHBondContact O-N 3.49Å; N3-L6 PolarHBondContact O-N 3.18Å; L6-A8 VanDerWaalsContact C-N 3.34Å; L6-A8 PolarHBondContact O-N 2.92Å; L6-L9 PolarHBondContact O-N 2.92Å; L6-L9 VanDerWaalsContact O-N 3.16Å; L6-E10 PolarHBondContact O-N 3.23Å
7R90.7Very high89Confident141 Ų14189.9 Ų89.953%0.53246%0.464SS..Hα-helixtrans-61.7-40.9174.5-166.2179.373.6-158.8-2.6112.4N3 D4 R5 L9 E10 E11N3-R7 PolarHBondContact O-N 3.21Å; D4-R7 PolarHBondContact O-N 3.4Å; R5-R7 VanDerWaalsContact C-N 3.33Å; R7-L9 VanDerWaalsContact C-N 3.29Å; R7-L9 PolarHBondContact O-N 3.41Å; R7-E10 WeakPolarHBondContact O-CB 3.49Å; R7-E10 PolarHBondContact O-N 3.09Å; R7-E11 PolarHBondContact O-N 2.93Å
8A90.3Very high89.5Confident17 Ų1787.2 Ų87.214%0.1445%0.453CS..Hα-helixtrans-62.2-36.2175.400000112.3D4 R5 L6 E11 V12D4-A8 PolarHBondContact O-N 2.9Å; R5-A8 PolarHBondContact O-N 2.8Å; L6-A8 VanDerWaalsContact C-N 3.34Å; L6-A8 PolarHBondContact O-N 2.92Å; A8-E11 PolarHBondContact O-N 3.24Å; A8-V12 WeakPolarHBondContact O-CG2 3.38Å; A8-V12 PolarHBondContact O-N 3.45Å
9L92.6Very high90Very high67 Ų6784 Ų8435%0.35144%0.436SS..Hα-helixtrans-69.3-38.1174.6-71.1171.7000112.4R5 L6 R7 E11 V12 E13 L58 Q61R5-L9 WeakPolarHBondContact O-CG 3.44Å; R5-L9 PolarHBondContact O-N 3.43Å; L6-L9 PolarHBondContact O-N 2.92Å; L6-L9 VanDerWaalsContact O-N 3.16Å; R7-L9 VanDerWaalsContact C-N 3.29Å; R7-L9 PolarHBondContact O-N 3.41Å; L9-E11 VanDerWaalsContact C-N 3.3Å; L9-E11 PolarHBondContact O-N 3.12Å; L9-V12 WeakPolarHBondContact O-CB 3.38Å; L9-V12 PolarHBondContact O-N 2.81Å; L9-V12 VanDerWaalsContact O-N 3.13Å; L9-E13 PolarHBondContact O-N 3.34Å; L9-L58 HydrophobicContact CD2-CD2 4.32Å; L9-Q61 HydrophobicContact CD2-CG 4.1Å
10E94.9Very high90.4Very high114 Ų11485.9 Ų85.953%0.53345%0.446SS..Hα-helixtrans-62.4-38.7172.5-172.6-179.5-174.300111.4L6 R7 V12 E13 N14L6-E10 PolarHBondContact O-N 3.23Å; R7-E10 WeakPolarHBondContact O-CB 3.49Å; R7-E10 PolarHBondContact O-N 3.09Å; E10-V12 VanDerWaalsContact C-N 3.34Å; E10-V12 PolarHBondContact O-N 3.18Å; E10-E13 PolarHBondContact O-N 2.67Å; E10-N14 PolarHBondContact O-N 3.33Å; E10-N14 PolarHBondContact O-ND2 2.78Å
11E94Very high90.8Very high113 Ų11387.4 Ų87.453%0.52845%0.451SS..Hα-helixtrans-63-39.2172-72.9176.1-161.200111.9R7 A8 L9 N14 Q15R7-E11 PolarHBondContact O-N 2.93Å; A8-E11 PolarHBondContact O-N 3.24Å; L9-E11 VanDerWaalsContact C-N 3.3Å; L9-E11 PolarHBondContact O-N 3.12Å; E11-N14 PolarHBondContact O-N 2.77Å; E11-Q15 WeakPolarHBondContact O-CG 3.31Å; E11-Q15 PolarHBondContact O-N 3.31Å
12V96.8Very high92.5Very high10 Ų1078.9 Ų78.96%0.06141%0.409CS..Hα-helixtrans-61.2-44.7173.51680000111.4A8 L9 E10 N14 Q15 I16 V54 E57 L58A8-V12 WeakPolarHBondContact O-CG2 3.38Å; A8-V12 PolarHBondContact O-N 3.45Å; L9-V12 WeakPolarHBondContact O-CB 3.38Å; L9-V12 PolarHBondContact O-N 2.81Å; L9-V12 VanDerWaalsContact O-N 3.13Å; E10-V12 VanDerWaalsContact C-N 3.34Å; E10-V12 PolarHBondContact O-N 3.18Å; V12-N14 VanDerWaalsContact C-N 3.31Å; V12-N14 PolarHBondContact O-N 3.34Å; V12-Q15 WeakPolarHBondContact O-CB 3.29Å; V12-Q15 PolarHBondContact O-N 3.03Å; V12-Q15 VanDerWaalsContact O-N 3.12Å; V12-I16 HydrophobicContact CG1-CD1 4.06Å; V12-I16 WeakPolarHBondContact O-CG1 3.4Å; V12-I16 PolarHBondContact O-N 3.18Å; V12-V54 HydrophobicContact CG1-CG1 4.1Å; V12-V54 HydrophobicContact CG1-CG2 4.31Å; V12-E57 HydrophobicContact CG2-CB 3.69Å; V12-E57 HydrophobicContact CG2-CG 3.53Å; V12-L58 HydrophobicContact CG1-CD1 4.4Å; V12-L58 HydrophobicContact CG1-CD2 4.08Å; V12-L58 HydrophobicContact CG1-CG 4.08Å
13E96.9Very high93.8Very high136 Ų13676.9 Ų76.964%0.63639%0.392SS*.Hα-helixtrans-59.4-42.8176.7-71.8179.1157.300111.7L9 E10 Q15 I16 A17L9-E13 PolarHBondContact O-N 3.34Å; E10-E13 PolarHBondContact O-N 2.67Å; E13-Q15 VanDerWaalsContact C-N 3.32Å; E13-Q15 PolarHBondContact O-N 3.21Å; E13-I16 WeakPolarHBondContact O-CB 3.38Å; E13-I16 PolarHBondContact O-N 3.09Å; E13-I16 VanDerWaalsContact O-N 3.16Å; E13-A17 PolarHBondContact O-N 3.45Å
14N96.9Very high94.7Very high95 Ų9572.8 Ų72.851%0.50838%0.38SS..Hα-helixtrans-63.3-36.4175-74.5-54.9000112.7E10 E11 V12 A17 T18E10-N14 PolarHBondContact O-N 3.33Å; E10-N14 PolarHBondContact O-ND2 2.78Å; E11-N14 PolarHBondContact O-N 2.77Å; V12-N14 VanDerWaalsContact C-N 3.31Å; V12-N14 PolarHBondContact O-N 3.34Å; N14-A17 PolarHBondContact O-N 2.96Å; N14-T18 PolarHBondContact O-N 2.91Å; N14-T18 VanDerWaalsContact O-N 3.09Å; N14-T18 PolarHBondContact O-OG1 3.41Å
15Q97.1Very high95.5Very high50 Ų5070.5 Ų70.523%0.23437%0.368CS..Hα-helixtrans-67.2-38.1173.2-66.9-62.1-24.300111.6E11 V12 E13 A17 T18 I19 S50 V54E11-Q15 WeakPolarHBondContact O-CG 3.31Å; E11-Q15 PolarHBondContact O-N 3.31Å; V12-Q15 WeakPolarHBondContact O-CB 3.29Å; V12-Q15 PolarHBondContact O-N 3.03Å; V12-Q15 VanDerWaalsContact O-N 3.12Å; E13-Q15 VanDerWaalsContact C-N 3.32Å; E13-Q15 PolarHBondContact O-N 3.21Å; Q15-A17 VanDerWaalsContact C-N 3.35Å; Q15-A17 PolarHBondContact O-N 3.23Å; Q15-T18 WeakPolarHBondContact O-CA 3.42Å; Q15-T18 WeakPolarHBondContact O-CB 3.35Å; Q15-T18 PolarHBondContact O-N 2.97Å; Q15-T18 VanDerWaalsContact O-N 3.13Å; Q15-I19 VanDerWaalsContact O-CG1 3.3Å; Q15-I19 WeakPolarHBondContact O-CG1 3.45Å; Q15-I19 PolarHBondContact O-N 2.91Å; Q15-S50 PolarHBondContact OE1-OG 3.13Å; Q15-V54 HydrophobicContact CB-CG2 3.55Å
16I97.9Very high96.2Very high72 Ų7268.6 Ų68.637%0.36936%0.363SS..Hα-helixtrans-62.1-43.2175.2-67167.8000110.9V12 E13 T18 I19 L20 V54V12-I16 HydrophobicContact CG1-CD1 4.06Å; V12-I16 WeakPolarHBondContact O-CG1 3.4Å; V12-I16 PolarHBondContact O-N 3.18Å; E13-I16 WeakPolarHBondContact O-CB 3.38Å; E13-I16 PolarHBondContact O-N 3.09Å; E13-I16 VanDerWaalsContact O-N 3.16Å; I16-T18 VanDerWaalsContact C-N 3.26Å; I16-T18 PolarHBondContact O-N 3.43Å; I16-I19 WeakPolarHBondContact O-CB 3.3Å; I16-I19 PolarHBondContact O-N 2.94Å; I16-L20 PolarHBondContact O-N 3.42Å; I16-V54 HydrophobicContact CD1-CG1 4.41Å; I16-V54 HydrophobicContact CG1-CG1 4.17Å; I16-V54 HydrophobicContact CG1-CG2 3.96Å
17A98.1Very high96.6Very high56 Ų5667.9 Ų67.946%0.46336%0.363SS..Hα-helixtrans-58.7-40.7173.400000111.8E13 N14 Q15 L20 Q21E13-A17 PolarHBondContact O-N 3.45Å; N14-A17 PolarHBondContact O-N 2.96Å; Q15-A17 VanDerWaalsContact C-N 3.35Å; Q15-A17 PolarHBondContact O-N 3.23Å; A17-L20 PolarHBondContact O-N 2.95Å; A17-Q21 PolarHBondContact O-N 3Å
18T97.9Very high96.9Very high41 Ų4166.3 Ų66.325%0.25236%0.364SS..Hα-helixtrans-63.1-42.7175.6-57.50000112N14 Q15 I16 L20 Q21 C22 Q46N14-T18 PolarHBondContact O-N 2.91Å; N14-T18 VanDerWaalsContact O-N 3.09Å; N14-T18 PolarHBondContact O-OG1 3.41Å; Q15-T18 WeakPolarHBondContact O-CA 3.42Å; Q15-T18 WeakPolarHBondContact O-CB 3.35Å; Q15-T18 PolarHBondContact O-N 2.97Å; Q15-T18 VanDerWaalsContact O-N 3.13Å; I16-T18 VanDerWaalsContact C-N 3.26Å; I16-T18 PolarHBondContact O-N 3.43Å; T18-L20 PolarHBondContact O-N 3.27Å; T18-Q21 PolarHBondContact O-N 3.49Å; T18-C22 PolarHBondContact O-N 3.35Å; T18-C22 PolarHBondContact O-SG 3.5Å; T18-C22 VanDerWaalsContact O-SG 3.39Å; T18-Q46 HydrophobicContact CG2-CG 4.22Å
19I98.6Very high97.3Very high26 Ų2666.2 Ų66.213%0.13336%0.361CS..Hα-helixtrans-57.6-48.7176.3-68.6166.2000110.4Q15 I16 Q21 C22 A23 F47 V51 V54Q15-I19 VanDerWaalsContact O-CG1 3.3Å; Q15-I19 WeakPolarHBondContact O-CG1 3.45Å; Q15-I19 PolarHBondContact O-N 2.91Å; I16-I19 WeakPolarHBondContact O-CB 3.3Å; I16-I19 PolarHBondContact O-N 2.94Å; I19-Q21 VanDerWaalsContact C-N 3.34Å; I19-Q21 PolarHBondContact O-N 3.4Å; I19-C22 PolarHBondContact O-N 2.96Å; I19-A23 WeakPolarHBondContact O-CB 3.34Å; I19-A23 PolarHBondContact O-N 3.48Å; I19-F47 HydrophobicContact CG2-CD2 3.82Å; I19-F47 HydrophobicContact CG2-CE2 3.39Å; I19-F47 HydrophobicContact CG2-CZ 4.09Å; I19-V51 HydrophobicContact CD1-CB 4.36Å; I19-V51 HydrophobicContact CD1-CG2 3.73Å; I19-V51 HydrophobicContact CG1-CG2 3.98Å; I19-V51 HydrophobicContact CG2-CG2 4.08Å; I19-V54 HydrophobicContact CD1-CB 4.44Å; I19-V54 HydrophobicContact CD1-CG2 3.84Å
20L98.4Very high97.5Very high122 Ų12267.4 Ų67.464%0.63937%0.367SS*.Hα-helixtrans-61.9-41.9178.6-68.9174.7000111.7I16 A17 T18 A23 G24I16-L20 PolarHBondContact O-N 3.42Å; A17-L20 PolarHBondContact O-N 2.95Å; T18-L20 PolarHBondContact O-N 3.27Å; L20-A23 PolarHBondContact O-N 3.25Å; L20-G24 PolarHBondContact O-N 2.96Å
21Q98.2Very high97.6Very high118 Ų11866.1 Ų66.155%0.55137%0.371SS*.Hα-helixtrans-64.5-45.8177.4-174.961.85900112.2A17 T18 I19 A23 G24 N25A17-Q21 PolarHBondContact O-N 3Å; T18-Q21 PolarHBondContact O-N 3.49Å; I19-Q21 VanDerWaalsContact C-N 3.34Å; I19-Q21 PolarHBondContact O-N 3.4Å; Q21-A23 VanDerWaalsContact C-N 3.35Å; Q21-G24 PolarHBondContact O-N 3.42Å; Q21-N25 PolarHBondContact NE2-OD1 2.9Å; Q21-N25 WeakPolarHBondContact O-CB 3.25Å; Q21-N25 PolarHBondContact O-N 3.39Å; Q21-N25 PolarHBondContact O-ND2 2.98Å
22C98.3Very high97.7Very high2 Ų265.4 Ų65.41%0.01437%0.366CS..Hα-helixtrans-61.4-44.2176.7-70.90000111.1T18 I19 G24 N25 I26 Q43 F47T18-C22 PolarHBondContact O-N 3.35Å; T18-C22 PolarHBondContact O-SG 3.5Å; T18-C22 VanDerWaalsContact O-SG 3.39Å; I19-C22 PolarHBondContact O-N 2.96Å; C22-G24 PolarHBondContact O-N 2.92Å; C22-N25 PolarHBondContact O-N 3.37Å; C22-I26 WeakPolarHBondContact O-CD1 3.36Å; C22-I26 VanDerWaalsContact O-CG1 3.24Å; C22-I26 WeakPolarHBondContact O-CG1 3.24Å; C22-I26 PolarHBondContact O-N 3.02Å; C22-Q43 PolarHBondContact SG-OE1 2.76Å; C22-Q43 VanDerWaalsContact SG-OE1 3.37Å; C22-F47 HydrophobicContact CB-CB 3.88Å; C22-F47 HydrophobicContact CB-CD2 4.24Å
23A98.4Very high97.6Very high34 Ų3473.3 Ų73.328%0.28141%0.408SS..Hα-helixtrans-60-46.6176.200000112I19 L20 Q21 N25 I26 V27 F47I19-A23 WeakPolarHBondContact O-CB 3.34Å; I19-A23 PolarHBondContact O-N 3.48Å; L20-A23 PolarHBondContact O-N 3.25Å; Q21-A23 VanDerWaalsContact C-N 3.35Å; A23-N25 VanDerWaalsContact C-N 3.33Å; A23-N25 PolarHBondContact O-N 3.17Å; A23-I26 PolarHBondContact O-N 3.46Å; A23-V27 WeakPolarHBondContact O-CG2 3.46Å; A23-V27 PolarHBondContact O-N 3.38Å; A23-F47 HydrophobicContact CB-CD2 4.27Å; A23-F47 HydrophobicContact CB-CE2 4Å
24G98.3Very high97.5Very high40 Ų4075.6 Ų75.641%0.41242%0.416SS..Hα-helixtrans-59.1-43.3175.900000112.4L20 Q21 C22 V27 L28L20-G24 PolarHBondContact O-N 2.96Å; Q21-G24 PolarHBondContact O-N 3.42Å; C22-G24 PolarHBondContact O-N 2.92Å; G24-V27 PolarHBondContact O-N 3.46Å; G24-L28 VanDerWaalsContact O-CB 3.3Å; G24-L28 WeakPolarHBondContact O-CB 3.49Å; G24-L28 PolarHBondContact O-N 2.83Å
25N97.9Very high97.4Very high39 Ų3975.4 Ų75.421%0.20941%0.411CS..Hα-helixtrans-64.5-39.6176.8-69.5-18.1000112.6Q21 C22 A23 E29 F39 Q43Q21-N25 PolarHBondContact NE2-OD1 2.9Å; Q21-N25 WeakPolarHBondContact O-CB 3.25Å; Q21-N25 PolarHBondContact O-N 3.39Å; Q21-N25 PolarHBondContact O-ND2 2.98Å; C22-N25 PolarHBondContact O-N 3.37Å; A23-N25 VanDerWaalsContact C-N 3.33Å; A23-N25 PolarHBondContact O-N 3.17Å; N25-E29 WeakPolarHBondContact O-CB 3.47Å; N25-E29 PolarHBondContact O-N 3.32Å; N25-F39 HydrophobicContact CB-CE1 4.25Å; N25-F39 HydrophobicContact CB-CZ 4.08Å; N25-Q43 HydrophobicContact CB-CG 4.2Å; N25-Q43 PolarHBondContact ND2-NE2 3.38Å; N25-Q43 VanDerWaalsContact ND2-NE2 3.15Å
26I98.2Very high97.4Very high31 Ų3177 Ų7716%0.15942%0.422CS..Hα-helixtrans-64.2-50.2177-71.1162.5000110C22 A23 L28 E29 L30 L40 Q43 F47C22-I26 WeakPolarHBondContact O-CD1 3.36Å; C22-I26 VanDerWaalsContact O-CG1 3.24Å; C22-I26 WeakPolarHBondContact O-CG1 3.24Å; C22-I26 PolarHBondContact O-N 3.02Å; A23-I26 PolarHBondContact O-N 3.46Å; I26-L28 VanDerWaalsContact C-N 3.34Å; I26-L28 PolarHBondContact O-N 2.99Å; I26-E29 PolarHBondContact O-N 3.26Å; I26-L30 HydrophobicContact CG2-CD1 3.81Å; I26-L30 HydrophobicContact CG2-CG 4.39Å; I26-L30 WeakPolarHBondContact O-CB 3.17Å; I26-L30 VanDerWaalsContact O-CG 3.27Å; I26-L30 WeakPolarHBondContact O-CG 3.4Å; I26-L30 PolarHBondContact O-N 2.92Å; I26-L40 HydrophobicContact CB-CD2 4.39Å; I26-L40 HydrophobicContact CG1-CD2 4.4Å; I26-L40 HydrophobicContact CG2-CD2 4.08Å; I26-Q43 HydrophobicContact CD1-CB 4.01Å; I26-Q43 HydrophobicContact CG1-CB 3.61Å; I26-F47 HydrophobicContact CD1-CB 4.49Å
27V98.1Very high97.3Very high101 Ų10176.7 Ų76.761%0.61243%0.43SS*.Hα-helixtrans-60.7-43.9179.7172.90000111.2A23 G24 L30 S31A23-V27 WeakPolarHBondContact O-CG2 3.46Å; A23-V27 PolarHBondContact O-N 3.38Å; G24-V27 PolarHBondContact O-N 3.46Å; V27-L30 PolarHBondContact O-N 3.37Å; V27-S31 PolarHBondContact O-N 3.36Å; V27-S31 VanDerWaalsContact O-N 3.09Å
28L97.4Very high97.2Very high108 Ų10878.2 Ų78.257%0.56544%0.437SS*.Hα-helixtrans-65.8-36.9178-177.965.7000112.6G24 I26 S31G24-L28 VanDerWaalsContact O-CB 3.3Å; G24-L28 WeakPolarHBondContact O-CB 3.49Å; G24-L28 PolarHBondContact O-N 2.83Å; I26-L28 VanDerWaalsContact C-N 3.34Å; I26-L28 PolarHBondContact O-N 2.99Å; L28-S31 PolarHBondContact O-OG 3.12Å
29E97.5Very high97.2Very high16 Ų1678.5 Ų78.58%0.07544%0.435CS..Hα-helixtrans-67.3-45.2175.4-173.563.3-15100110.3N25 I26 S31 K32 H35 N36 F39 L40N25-E29 WeakPolarHBondContact O-CB 3.47Å; N25-E29 PolarHBondContact O-N 3.32Å; I26-E29 PolarHBondContact O-N 3.26Å; E29-S31 PolarHBondContact O-N 3.5Å; E29-K32 WeakPolarHBondContact O-CB 3.4Å; E29-K32 WeakPolarHBondContact O-CG 3.44Å; E29-K32 PolarHBondContact O-N 2.74Å; E29-K32 VanDerWaalsContact O-N 3.12Å; E29-K32 IonicContact OE1-NZ 2.85Å; E29-K32 WeakPolarHBondContact OE2-CE 3.32Å; E29-K32 IonicContact OE2-NZ 3.99Å; E29-K32 PolarHBondContact OE2-NZ 3.05Å; E29-H35 PolarHBondContact O-CD2 2.99Å; E29-H35 VanDerWaalsContact O-CD2 3.28Å; E29-N36 WeakPolarHBondContact OE1-CB 3.31Å; E29-N36 PolarHBondContact OE1-N 3.47Å; E29-F39 HydrophobicContact CB-CD1 4.12Å; E29-F39 HydrophobicContact CB-CE1 4.1Å; E29-F39 HydrophobicContact CG-CD1 3.92Å; E29-F39 HydrophobicContact CG-CE1 4.39Å; E29-L40 HydrophobicContact CB-CD2 3.8Å; E29-L40 HydrophobicContact CB-CG 4.38Å; E29-L40 HydrophobicContact CG-CD1 4.36Å; E29-L40 HydrophobicContact CG-CD2 3.86Å; E29-L40 HydrophobicContact CG-CG 3.86Å
30L96.8Very high97.2Very high92 Ų9278.7 Ų78.748%0.48244%0.436SS..Hα-helixtrans-61.9-23.8178.6-71.4174.2000113.8I26 V27 K32 H35 L40I26-L30 HydrophobicContact CG2-CD1 3.81Å; I26-L30 HydrophobicContact CG2-CG 4.39Å; I26-L30 WeakPolarHBondContact O-CB 3.17Å; I26-L30 VanDerWaalsContact O-CG 3.27Å; I26-L30 WeakPolarHBondContact O-CG 3.4Å; I26-L30 PolarHBondContact O-N 2.92Å; V27-L30 PolarHBondContact O-N 3.37Å; L30-K32 VanDerWaalsContact C-N 3.26Å; L30-K32 PolarHBondContact O-N 3.47Å; L30-H35 VanDerWaalsContact CA-CD2 3.48Å; L30-H35 WeakPolarHBondContact CA-CD2 3.38Å; L30-H35 PolarHBondContact O-CD2 2.95Å; L30-H35 PolarHBondContact O-NE2 3.33Å; L30-L40 HydrophobicContact CD2-CD1 3.88Å; L30-L40 HydrophobicContact CD2-CD2 4.37Å; L30-L40 HydrophobicContact CG-CD2 4.2Å
31S97Very high97.1Very high87 Ų8777.7 Ų77.761%0.60843%0.432SS*.THydrogen-bonded Turntrans-78.2-5.417772.80000114.3V27 L28 E29V27-S31 PolarHBondContact O-N 3.36Å; V27-S31 VanDerWaalsContact O-N 3.09Å; L28-S31 PolarHBondContact O-OG 3.12Å; E29-S31 PolarHBondContact O-N 3.5Å
32K97.3Very high97.1Very high98 Ų9879.7 Ų79.743%0.42643%0.434SS..SBendtrans-81.7154177.6-61.7174.5-176.2172.90110.8E29 L30 K34 H35E29-K32 WeakPolarHBondContact O-CB 3.4Å; E29-K32 WeakPolarHBondContact O-CG 3.44Å; E29-K32 PolarHBondContact O-N 2.74Å; E29-K32 VanDerWaalsContact O-N 3.12Å; E29-K32 IonicContact OE1-NZ 2.85Å; E29-K32 WeakPolarHBondContact OE2-CE 3.32Å; E29-K32 IonicContact OE2-NZ 3.99Å; E29-K32 PolarHBondContact OE2-NZ 3.05Å; L30-K32 VanDerWaalsContact C-N 3.26Å; L30-K32 PolarHBondContact O-N 3.47Å; K32-K34 VanDerWaalsContact C-N 3.25Å; K32-K34 PolarHBondContact O-N 3.35Å; K32-H35 PolarHBondContact O-CD2 3.49Å; K32-H35 PolarHBondContact O-NE2 2.99Å
33D94.5Very high97.1Very high176 Ų17680.2 Ų80.294%0.94144%0.436SS*.SBendtrans-65.2-30.4175.2-64.7-43.5000112.9
34K95.4Very high97.1Very high184 Ų18482.9 Ų82.980%0.845%0.445SS*.SBendtrans-131113176.4-172.6-179.3-178.7179.90110.3K32K32-K34 VanDerWaalsContact C-N 3.25Å; K32-K34 PolarHBondContact O-N 3.35Å
35H93.7Very high97.1Very high90 Ų9084.9 Ų84.942%0.41745%0.453SS..  trans-84.3144.7-176.9-39.593.4000112.6E29 L30 K32 A37 L40E29-H35 PolarHBondContact O-CD2 2.99Å; E29-H35 VanDerWaalsContact O-CD2 3.28Å; L30-H35 VanDerWaalsContact CA-CD2 3.48Å; L30-H35 WeakPolarHBondContact CA-CD2 3.38Å; L30-H35 PolarHBondContact O-CD2 2.95Å; L30-H35 PolarHBondContact O-NE2 3.33Å; K32-H35 PolarHBondContact O-CD2 3.49Å; K32-H35 PolarHBondContact O-NE2 2.99Å; H35-A37 PolarHBondContact O-N 2.95Å; H35-L40 HydrophobicContact CB-CD1 4.12Å
36N96.6Very high97.1Very high84 Ų8487.6 Ų87.645%0.44946%0.464SS..  trans-89.497.9167.6-175.2-21.1000110.9E29 S38 F39 L40E29-N36 WeakPolarHBondContact OE1-CB 3.31Å; E29-N36 PolarHBondContact OE1-N 3.47Å; N36-S38 VanDerWaalsContact C-N 3.33Å; N36-S38 PolarHBondContact O-N 2.92Å; N36-S38 PolarHBondContact OD1-N 3.26Å; N36-F39 HydrophobicContact CB-CB 3.93Å; N36-F39 PolarHBondContact O-N 2.95Å; N36-F39 PolarHBondContact OD1-N 2.9Å; N36-F39 VanDerWaalsContact OD1-N 3.09Å; N36-L40 PolarHBondContact O-N 2.76Å
37A95.8Very high97.1Very high65 Ų6589.1 Ų89.154%0.53747%0.47SS..Hα-helixtrans-56.5-42.3-179.800000113.4H35 F39 L40 D41H35-A37 PolarHBondContact O-N 2.95Å; A37-F39 VanDerWaalsContact C-N 3.33Å; A37-F39 PolarHBondContact O-N 3.19Å; A37-L40 PolarHBondContact O-N 2.98Å; A37-D41 PolarHBondContact O-N 3.3Å
38S97.6Very high97.2Very high89 Ų8987.3 Ų87.362%0.62246%0.459SS*.Hα-helixtrans-65-36.8179.7178.80000112.4N36 R42N36-S38 VanDerWaalsContact C-N 3.33Å; N36-S38 PolarHBondContact O-N 2.92Å; N36-S38 PolarHBondContact OD1-N 3.26Å; S38-R42 PolarHBondContact O-N 3.32Å
39F97.2Very high97.2Very high47 Ų4783.4 Ų83.421%0.20645%0.446CS..Hα-helixtrans-66.8-44.6173.8176.3-96.7000111.5N25 E29 N36 A37 R42 Q43N25-F39 HydrophobicContact CB-CE1 4.25Å; N25-F39 HydrophobicContact CB-CZ 4.08Å; E29-F39 HydrophobicContact CB-CD1 4.12Å; E29-F39 HydrophobicContact CB-CE1 4.1Å; E29-F39 HydrophobicContact CG-CD1 3.92Å; E29-F39 HydrophobicContact CG-CE1 4.39Å; N36-F39 HydrophobicContact CB-CB 3.93Å; N36-F39 PolarHBondContact O-N 2.95Å; N36-F39 PolarHBondContact OD1-N 2.9Å; N36-F39 VanDerWaalsContact OD1-N 3.09Å; A37-F39 VanDerWaalsContact C-N 3.33Å; A37-F39 PolarHBondContact O-N 3.19Å; F39-R42 PolarHBondContact O-N 3.15Å; F39-Q43 HydrophobicContact CD1-CG 4.07Å; F39-Q43 HydrophobicContact CD2-CG 4.46Å; F39-Q43 HydrophobicContact CE1-CG 3.69Å; F39-Q43 HydrophobicContact CE2-CG 4.11Å; F39-Q43 VanDerWaalsContact CE2-NE2 3.32Å; F39-Q43 HydrophobicContact CG-CG 4.46Å; F39-Q43 HydrophobicContact CZ-CG 3.72Å; F39-Q43 WeakPolarHBondContact O-CG 3.3Å; F39-Q43 PolarHBondContact O-N 3.39Å
40L97.9Very high97.2Very high29 Ų2982.8 Ų82.815%0.15244%0.443CS..Hα-helixtrans-58.5-47.9176.9-75.3173.1000111.6I26 E29 L30 H35 N36 A37 R42 Q43 L44I26-L40 HydrophobicContact CB-CD2 4.39Å; I26-L40 HydrophobicContact CG1-CD2 4.4Å; I26-L40 HydrophobicContact CG2-CD2 4.08Å; E29-L40 HydrophobicContact CB-CD2 3.8Å; E29-L40 HydrophobicContact CB-CG 4.38Å; E29-L40 HydrophobicContact CG-CD1 4.36Å; E29-L40 HydrophobicContact CG-CD2 3.86Å; E29-L40 HydrophobicContact CG-CG 3.86Å; L30-L40 HydrophobicContact CD2-CD1 3.88Å; L30-L40 HydrophobicContact CD2-CD2 4.37Å; L30-L40 HydrophobicContact CG-CD2 4.2Å; H35-L40 HydrophobicContact CB-CD1 4.12Å; N36-L40 PolarHBondContact O-N 2.76Å; A37-L40 PolarHBondContact O-N 2.98Å; L40-R42 VanDerWaalsContact C-N 3.29Å; L40-R42 PolarHBondContact O-N 2.89Å; L40-Q43 PolarHBondContact O-N 2.96Å; L40-L44 VanDerWaalsContact O-CB 3.29Å; L40-L44 WeakPolarHBondContact O-CB 3.49Å; L40-L44 PolarHBondContact O-N 3.33Å
41D97.9Very high97.3Very high102 Ų10280.8 Ų80.855%0.54543%0.434SS..Hα-helixtrans-60-40.4179.2-76.3-19.5000112.1A37 S45A37-D41 PolarHBondContact O-N 3.3Å; D41-S45 VanDerWaalsContact O-CB 3.31Å; D41-S45 WeakPolarHBondContact O-CB 3.37Å; D41-S45 PolarHBondContact O-N 3.18Å; D41-S45 PolarHBondContact O-OG 2.94Å
42R98.1Very high97.3Very high160 Ų16080.5 Ų80.560%0.60443%0.426SS*.Hα-helixtrans-64.8-46.5176-173.8178.167.5176.51.2111.6S38 F39 L40 L44 S45 Q46S38-R42 PolarHBondContact O-N 3.32Å; F39-R42 PolarHBondContact O-N 3.15Å; L40-R42 VanDerWaalsContact C-N 3.29Å; L40-R42 PolarHBondContact O-N 2.89Å; R42-L44 VanDerWaalsContact C-N 3.34Å; R42-S45 PolarHBondContact O-N 3.36Å; R42-Q46 PolarHBondContact O-N 2.93Å
43Q98.3Very high97.3Very high12 Ų1283.3 Ų83.36%0.05643%0.434CS..Hα-helixtrans-65.4-39.3179-66.7-64.64.400111.8C22 N25 I26 F39 L40 Q46 F47C22-Q43 PolarHBondContact SG-OE1 2.76Å; C22-Q43 VanDerWaalsContact SG-OE1 3.37Å; N25-Q43 HydrophobicContact CB-CG 4.2Å; N25-Q43 PolarHBondContact ND2-NE2 3.38Å; N25-Q43 VanDerWaalsContact ND2-NE2 3.15Å; I26-Q43 HydrophobicContact CD1-CB 4.01Å; I26-Q43 HydrophobicContact CG1-CB 3.61Å; F39-Q43 HydrophobicContact CD1-CG 4.07Å; F39-Q43 HydrophobicContact CD2-CG 4.46Å; F39-Q43 HydrophobicContact CE1-CG 3.69Å; F39-Q43 HydrophobicContact CE2-CG 4.11Å; F39-Q43 VanDerWaalsContact CE2-NE2 3.32Å; F39-Q43 HydrophobicContact CG-CG 4.46Å; F39-Q43 HydrophobicContact CZ-CG 3.72Å; F39-Q43 WeakPolarHBondContact O-CG 3.3Å; F39-Q43 PolarHBondContact O-N 3.39Å; L40-Q43 PolarHBondContact O-N 2.96Å; Q43-Q46 PolarHBondContact O-N 2.75Å; Q43-F47 VanDerWaalsContact O-CB 3.25Å; Q43-F47 WeakPolarHBondContact O-CB 3.3Å; Q43-F47 PolarHBondContact O-N 3.06Å
44L98.1Very high97.4Very high90 Ų9075.8 Ų75.847%0.47139%0.394SS..Hα-helixtrans-66.6-40.6177.6-175.363.6000111.7L40 R42 F47 T48L40-L44 VanDerWaalsContact O-CB 3.29Å; L40-L44 WeakPolarHBondContact O-CB 3.49Å; L40-L44 PolarHBondContact O-N 3.33Å; R42-L44 VanDerWaalsContact C-N 3.34Å; L44-F47 PolarHBondContact O-N 3.42Å; L44-T48 WeakPolarHBondContact O-CB 3.32Å; L44-T48 PolarHBondContact O-N 2.85Å; L44-T48 PolarHBondContact O-OG1 3.12Å
45S98.3Very high97.5Very high83 Ų8372.8 Ų72.858%0.5838%0.383SS*.Hα-helixtrans-62.5-44.1174.9-62.20000111.5D41 R42 G49D41-S45 VanDerWaalsContact O-CB 3.31Å; D41-S45 WeakPolarHBondContact O-CB 3.37Å; D41-S45 PolarHBondContact O-N 3.18Å; D41-S45 PolarHBondContact O-OG 2.94Å; R42-S45 PolarHBondContact O-N 3.36Å; S45-G49 PolarHBondContact O-N 3.49Å
46Q98.1Very high97.7Very high95 Ų9572.7 Ų72.744%0.44439%0.389SS..Hα-helixtrans-66.1-45.6176.7-173.2173.210.300111.8T18 R42 Q43 T48 G49 S50T18-Q46 HydrophobicContact CG2-CG 4.22Å; R42-Q46 PolarHBondContact O-N 2.93Å; Q43-Q46 PolarHBondContact O-N 2.75Å; Q46-T48 PolarHBondContact O-N 3.38Å; Q46-G49 PolarHBondContact O-N 3.46Å; Q46-S50 PolarHBondContact O-N 3.31Å; Q46-S50 PolarHBondContact O-OG 3.37Å
47F98.6Very high97.6Very high64 Ų6471.7 Ų71.728%0.28138%0.382SS..Hα-helixtrans-54.2-54.3175.7176.5-88.8000111.1I19 C22 A23 I26 Q43 L44 G49 S50 V51I19-F47 HydrophobicContact CG2-CD2 3.82Å; I19-F47 HydrophobicContact CG2-CE2 3.39Å; I19-F47 HydrophobicContact CG2-CZ 4.09Å; C22-F47 HydrophobicContact CB-CB 3.88Å; C22-F47 HydrophobicContact CB-CD2 4.24Å; A23-F47 HydrophobicContact CB-CD2 4.27Å; A23-F47 HydrophobicContact CB-CE2 4Å; I26-F47 HydrophobicContact CD1-CB 4.49Å; Q43-F47 VanDerWaalsContact O-CB 3.25Å; Q43-F47 WeakPolarHBondContact O-CB 3.3Å; Q43-F47 PolarHBondContact O-N 3.06Å; L44-F47 PolarHBondContact O-N 3.42Å; F47-G49 VanDerWaalsContact C-N 3.33Å; F47-G49 PolarHBondContact O-N 2.85Å; F47-S50 PolarHBondContact O-N 3.22Å; F47-V51 HydrophobicContact CD1-CG2 4.18Å; F47-V51 HydrophobicContact CE1-CG2 3.83Å; F47-V51 HydrophobicContact CZ-CG2 4.01Å; F47-V51 WeakPolarHBondContact O-CG2 3.49Å; F47-V51 PolarHBondContact O-N 2.91Å
48T98.2Very high97.6Very high62 Ų6271.8 Ų71.838%0.3837%0.373SS..Hα-helixtrans-63-42-178-52.10000111.1L44 Q46 S50 V51 N52L44-T48 WeakPolarHBondContact O-CB 3.32Å; L44-T48 PolarHBondContact O-N 2.85Å; L44-T48 PolarHBondContact O-OG1 3.12Å; Q46-T48 PolarHBondContact O-N 3.38Å; T48-S50 PolarHBondContact O-N 3.04Å; T48-V51 PolarHBondContact O-N 3.41Å; T48-N52 WeakPolarHBondContact O-CB 3.3Å; T48-N52 VanDerWaalsContact O-CG 3.25Å; T48-N52 PolarHBondContact O-N 3Å; T48-N52 PolarHBondContact O-ND2 2.94Å
49G98.1Very high97.5Very high27 Ų2769.8 Ų69.828%0.27836%0.359SS..Hα-helixtrans-61.3-43.7176.300000113S45 Q46 F47 R53S45-G49 PolarHBondContact O-N 3.49Å; Q46-G49 PolarHBondContact O-N 3.46Å; F47-G49 VanDerWaalsContact C-N 3.33Å; F47-G49 PolarHBondContact O-N 2.85Å; G49-R53 WeakPolarHBondContact O-CG 3.41Å; G49-R53 PolarHBondContact O-N 3.01Å; G49-R53 VanDerWaalsContact O-N 3.17Å
50S97.9Very high97.2Very high3 Ų369.8 Ų69.82%0.02137%0.365CS..Hα-helixtrans-68.6-40.4177.1-70.90000112.1Q15 Q46 F47 T48 N52 R53 V54Q15-S50 PolarHBondContact OE1-OG 3.13Å; Q46-S50 PolarHBondContact O-N 3.31Å; Q46-S50 PolarHBondContact O-OG 3.37Å; F47-S50 PolarHBondContact O-N 3.22Å; T48-S50 PolarHBondContact O-N 3.04Å; S50-N52 PolarHBondContact O-N 3.01Å; S50-R53 PolarHBondContact O-N 3.16Å; S50-V54 WeakPolarHBondContact O-CG2 3.5Å; S50-V54 PolarHBondContact O-N 2.86Å
51V98.4Very high96.9Very high49 Ų4969.2 Ų69.230%0.29736%0.361SS..Hα-helixtrans-57.6-49.7174.31700000110.9I19 F47 T48 R53 V54 E55I19-V51 HydrophobicContact CD1-CB 4.36Å; I19-V51 HydrophobicContact CD1-CG2 3.73Å; I19-V51 HydrophobicContact CG1-CG2 3.98Å; I19-V51 HydrophobicContact CG2-CG2 4.08Å; F47-V51 HydrophobicContact CD1-CG2 4.18Å; F47-V51 HydrophobicContact CE1-CG2 3.83Å; F47-V51 HydrophobicContact CZ-CG2 4.01Å; F47-V51 WeakPolarHBondContact O-CG2 3.49Å; F47-V51 PolarHBondContact O-N 2.91Å; T48-V51 PolarHBondContact O-N 3.41Å; V51-R53 VanDerWaalsContact C-N 3.28Å; V51-R53 PolarHBondContact O-N 3.42Å; V51-V54 PolarHBondContact O-N 3.38Å; V51-E55 PolarHBondContact O-N 2.93Å
52N97.8Very high96.5Very high82 Ų8269.3 Ų69.344%0.43936%0.361SS..Hα-helixtrans-60.5-37.4179.8-71.6-19.2000112.5T48 S50 T56T48-N52 WeakPolarHBondContact O-CB 3.3Å; T48-N52 VanDerWaalsContact O-CG 3.25Å; T48-N52 PolarHBondContact O-N 3Å; T48-N52 PolarHBondContact O-ND2 2.94Å; S50-N52 PolarHBondContact O-N 3.01Å; N52-T56 WeakPolarHBondContact O-CB 3.47Å; N52-T56 PolarHBondContact O-N 2.81Å; N52-T56 PolarHBondContact O-OG1 3.09Å
53R96.4Very high96.1Very high157 Ų15769.7 Ų69.759%0.59236%0.362SS*.Hα-helixtrans-66.4-47.1175.8-75.8177-178.9149.20.4111.8G49 S50 V51 E55 T56 E57G49-R53 WeakPolarHBondContact O-CG 3.41Å; G49-R53 PolarHBondContact O-N 3.01Å; G49-R53 VanDerWaalsContact O-N 3.17Å; S50-R53 PolarHBondContact O-N 3.16Å; V51-R53 VanDerWaalsContact C-N 3.28Å; V51-R53 PolarHBondContact O-N 3.42Å; R53-E55 VanDerWaalsContact C-N 3.33Å; R53-E55 PolarHBondContact O-N 3.38Å; R53-T56 PolarHBondContact O-N 3.36Å; R53-E57 WeakPolarHBondContact O-CB 3.36Å; R53-E57 PolarHBondContact O-N 3.46Å
54V97.9Very high95.4Very high18 Ų1872.7 Ų72.711%0.10937%0.373CS..Hα-helixtrans-58.2-47.4177169.50000110.4V12 Q15 I16 I19 S50 V51 T56 L58V12-V54 HydrophobicContact CG1-CG1 4.1Å; V12-V54 HydrophobicContact CG1-CG2 4.31Å; Q15-V54 HydrophobicContact CB-CG2 3.55Å; I16-V54 HydrophobicContact CD1-CG1 4.41Å; I16-V54 HydrophobicContact CG1-CG1 4.17Å; I16-V54 HydrophobicContact CG1-CG2 3.96Å; I19-V54 HydrophobicContact CD1-CB 4.44Å; I19-V54 HydrophobicContact CD1-CG2 3.84Å; S50-V54 WeakPolarHBondContact O-CG2 3.5Å; S50-V54 PolarHBondContact O-N 2.86Å; V51-V54 PolarHBondContact O-N 3.38Å; V54-T56 PolarHBondContact O-N 3.32Å; V54-L58 HydrophobicContact CG1-CD1 3.68Å; V54-L58 HydrophobicContact CG1-CG 4.32Å; V54-L58 VanDerWaalsContact O-CB 3.3Å; V54-L58 WeakPolarHBondContact O-CB 3.28Å; V54-L58 VanDerWaalsContact O-CG 3.32Å; V54-L58 WeakPolarHBondContact O-CG 3.41Å; V54-L58 PolarHBondContact O-N 2.89Å
55E97.6Very high94.8Very high120 Ų12073.3 Ų73.356%0.56138%0.377SS*.Hα-helixtrans-60.7-47.2178.6-175.5-179.2171.700112.1V51 R53 S59V51-E55 PolarHBondContact O-N 2.93Å; R53-E55 VanDerWaalsContact C-N 3.33Å; R53-E55 PolarHBondContact O-N 3.38Å; E55-S59 WeakPolarHBondContact O-CB 3.48Å; E55-S59 PolarHBondContact O-N 2.9Å; E55-S59 PolarHBondContact O-OG 3.16Å
56T96.3Very high94.1Very high89 Ų8972.9 Ų72.955%0.54637%0.371SS..Hα-helixtrans-62.6-47.3-178.7-60.60000111.4N52 R53 V54 S59 S60N52-T56 WeakPolarHBondContact O-CB 3.47Å; N52-T56 PolarHBondContact O-N 2.81Å; N52-T56 PolarHBondContact O-OG1 3.09Å; R53-T56 PolarHBondContact O-N 3.36Å; V54-T56 PolarHBondContact O-N 3.32Å; T56-S59 PolarHBondContact O-N 3.05Å; T56-S60 PolarHBondContact O-N 3.43Å
57E95.5Very high93.2Very high62 Ų6273.6 Ų73.629%0.2937%0.374SS..Hα-helixtrans-71-45.8-176.1-168.855.2-140.100111.1V12 R53 S59 S60 Q61V12-E57 HydrophobicContact CG2-CB 3.69Å; V12-E57 HydrophobicContact CG2-CG 3.53Å; R53-E57 WeakPolarHBondContact O-CB 3.36Å; R53-E57 PolarHBondContact O-N 3.46Å; E57-S59 VanDerWaalsContact C-N 3.29Å; E57-S59 PolarHBondContact O-N 2.84Å; E57-S60 WeakPolarHBondContact O-CA 3.36Å; E57-S60 VanDerWaalsContact O-CB 3.28Å; E57-S60 WeakPolarHBondContact O-CB 3.47Å; E57-S60 PolarHBondContact O-N 3.06Å; E57-Q61 WeakPolarHBondContact O-CG 3.38Å; E57-Q61 PolarHBondContact O-N 3.32Å; E57-Q61 PolarHBondContact OE1-NE2 3.34Å
58L95.8Very high92.1Very high67 Ų6772.5 Ų72.535%0.35137%0.373SS..Hα-helixtrans-60-41.2174.9-72.6177.9000111.7L9 V12 V54 S60 Q61 I62L9-L58 HydrophobicContact CD2-CD2 4.32Å; V12-L58 HydrophobicContact CG1-CD1 4.4Å; V12-L58 HydrophobicContact CG1-CD2 4.08Å; V12-L58 HydrophobicContact CG1-CG 4.08Å; V54-L58 HydrophobicContact CG1-CD1 3.68Å; V54-L58 HydrophobicContact CG1-CG 4.32Å; V54-L58 VanDerWaalsContact O-CB 3.3Å; V54-L58 WeakPolarHBondContact O-CB 3.28Å; V54-L58 VanDerWaalsContact O-CG 3.32Å; V54-L58 WeakPolarHBondContact O-CG 3.41Å; V54-L58 PolarHBondContact O-N 2.89Å; L58-S60 VanDerWaalsContact C-N 3.28Å; L58-S60 PolarHBondContact O-N 3.4Å; L58-Q61 PolarHBondContact O-N 2.95Å; L58-I62 VanDerWaalsContact O-CG1 3.3Å; L58-I62 WeakPolarHBondContact O-CG1 3.49Å; L58-I62 PolarHBondContact O-N 3.49Å
59S95.3Very high90.8Very high47 Ų4773.6 Ų73.633%0.32939%0.388SS..Hα-helixtrans-63.1-34.6175.2-64.30000112.6E55 T56 E57 R63E55-S59 WeakPolarHBondContact O-CB 3.48Å; E55-S59 PolarHBondContact O-N 2.9Å; E55-S59 PolarHBondContact O-OG 3.16Å; T56-S59 PolarHBondContact O-N 3.05Å; E57-S59 VanDerWaalsContact C-N 3.29Å; E57-S59 PolarHBondContact O-N 2.84Å; S59-R63 WeakPolarHBondContact O-CB 3.38Å; S59-R63 VanDerWaalsContact O-CG 3.31Å; S59-R63 WeakPolarHBondContact O-CG 3.41Å; S59-R63 PolarHBondContact O-N 3.06Å; S59-R63 PolarHBondContact O-NE 3.46Å; S59-R63 VanDerWaalsContact O-NE 3.12Å
60S92Very high89.3Confident47 Ų4777.5 Ų77.533%0.32941%0.406SS..Hα-helixtrans-66.6-45.6173.3-177.70000111.4T56 E57 L58 R63 Y64T56-S60 PolarHBondContact O-N 3.43Å; E57-S60 WeakPolarHBondContact O-CA 3.36Å; E57-S60 VanDerWaalsContact O-CB 3.28Å; E57-S60 WeakPolarHBondContact O-CB 3.47Å; E57-S60 PolarHBondContact O-N 3.06Å; L58-S60 VanDerWaalsContact C-N 3.28Å; L58-S60 PolarHBondContact O-N 3.4Å; S60-R63 PolarHBondContact O-N 3.24Å; S60-Y64 WeakPolarHBondContact O-CB 3.33Å; S60-Y64 PolarHBondContact O-N 3.33Å
61Q89.6Confident87.2Confident17 Ų1780.1 Ų80.18%0.07943%0.434CS..Hα-helixtrans-64.5-42.5178-61.7-60.3-24.700111.8L9 E57 L58 Y64 L65L9-Q61 HydrophobicContact CD2-CG 4.1Å; E57-Q61 WeakPolarHBondContact O-CG 3.38Å; E57-Q61 PolarHBondContact O-N 3.32Å; E57-Q61 PolarHBondContact OE1-NE2 3.34Å; L58-Q61 PolarHBondContact O-N 2.95Å; Q61-Y64 PolarHBondContact O-N 3.39Å; Q61-L65 WeakPolarHBondContact O-CB 3.49Å; Q61-L65 WeakPolarHBondContact O-CG 3.41Å; Q61-L65 PolarHBondContact O-N 3Å
62I90.9Very high84.9Confident105 Ų10583.3 Ų83.354%0.53845%0.445SS..Hα-helixtrans-62.1-46.1175.3-68.8167.1000110.8L58 Y64 L65 T66L58-I62 VanDerWaalsContact O-CG1 3.3Å; L58-I62 WeakPolarHBondContact O-CG1 3.49Å; L58-I62 PolarHBondContact O-N 3.49Å; I62-Y64 VanDerWaalsContact C-N 3.31Å; I62-Y64 PolarHBondContact O-N 3.13Å; I62-L65 PolarHBondContact O-N 3.03Å; I62-T66 WeakPolarHBondContact O-CB 3.46Å; I62-T66 PolarHBondContact O-N 2.91Å; I62-T66 PolarHBondContact O-OG1 3.24Å
63R88.4Confident82.5Confident167 Ų16783.6 Ų83.663%0.6345%0.452SS*.Hα-helixtrans-59-43.7176.4-82.5-178.4-80178.2-6.8111.6S59 S60 T66 Q67S59-R63 WeakPolarHBondContact O-CB 3.38Å; S59-R63 VanDerWaalsContact O-CG 3.31Å; S59-R63 WeakPolarHBondContact O-CG 3.41Å; S59-R63 PolarHBondContact O-N 3.06Å; S59-R63 PolarHBondContact O-NE 3.46Å; S59-R63 VanDerWaalsContact O-NE 3.12Å; S60-R63 PolarHBondContact O-N 3.24Å; R63-T66 WeakPolarHBondContact O-CB 3.4Å; R63-T66 PolarHBondContact O-N 3.17Å; R63-Q67 WeakPolarHBondContact O-CB 3.28Å; R63-Q67 PolarHBondContact O-N 3Å
64Y85.3Confident80.6Confident75 Ų7581.2 Ų81.229%0.29445%0.447SS..Hα-helixtrans-62.8-50.9175.8172.1-104.3000112.2R5 S60 Q61 I62 T66 Q67 V68R5-Y64 VanDerWaalsContact CZ-CD2 3.4Å; R5-Y64 VanDerWaalsContact NE-CD1 3.34Å; R5-Y64 VanDerWaalsContact NH1-CB 3.3Å; R5-Y64 VanDerWaalsContact NH1-CG 3.29Å; S60-Y64 WeakPolarHBondContact O-CB 3.33Å; S60-Y64 PolarHBondContact O-N 3.33Å; Q61-Y64 PolarHBondContact O-N 3.39Å; I62-Y64 VanDerWaalsContact C-N 3.31Å; I62-Y64 PolarHBondContact O-N 3.13Å; Y64-T66 PolarHBondContact O-N 2.81Å; Y64-Q67 WeakPolarHBondContact O-CB 3.43Å; Y64-Q67 PolarHBondContact O-N 3.02Å; Y64-V68 HydrophobicContact CD1-CG2 4.36Å; Y64-V68 HydrophobicContact CD2-CG1 3.91Å; Y64-V68 HydrophobicContact CE1-CG1 4.12Å; Y64-V68 HydrophobicContact CE1-CG2 4.05Å; Y64-V68 HydrophobicContact CE2-CG1 3.41Å; Y64-V68 VanDerWaalsContact CE2-CG1 3.41Å; Y64-V68 HydrophobicContact CG-CG1 4.49Å; Y64-V68 WeakPolarHBondContact O-CG2 3Å; Y64-V68 PolarHBondContact O-N 3.31Å
65L84.1Confident78.3Confident103 Ų10390.3 Ų90.354%0.53949%0.489SS..Hα-helixtrans-57-41.7178.3-77.1174.2000111Q61 I62 V68 A69Q61-L65 WeakPolarHBondContact O-CB 3.49Å; Q61-L65 WeakPolarHBondContact O-CG 3.41Å; Q61-L65 PolarHBondContact O-N 3Å; I62-L65 PolarHBondContact O-N 3.03Å; L65-V68 PolarHBondContact O-N 2.96Å; L65-A69 WeakPolarHBondContact O-CA 3.42Å; L65-A69 WeakPolarHBondContact O-CB 3.48Å; L65-A69 PolarHBondContact O-N 3.13Å
66T83.6Confident76.4Confident74 Ų7488 Ų8845%0.45450%0.496SS..Hα-helixtrans-58.2-52.4173.4-55.40000110.2I62 R63 Y64 V68 A69 T70I62-T66 WeakPolarHBondContact O-CB 3.46Å; I62-T66 PolarHBondContact O-N 2.91Å; I62-T66 PolarHBondContact O-OG1 3.24Å; R63-T66 WeakPolarHBondContact O-CB 3.4Å; R63-T66 PolarHBondContact O-N 3.17Å; Y64-T66 PolarHBondContact O-N 2.81Å; T66-V68 PolarHBondContact O-N 3.45Å; T66-A69 PolarHBondContact O-N 3.1Å; T66-T70 HydrophobicContact CG2-CG2 4.23Å; T66-T70 WeakPolarHBondContact O-CB 3.49Å; T66-T70 VanDerWaalsContact O-CG2 3.28Å; T66-T70 WeakPolarHBondContact O-CG2 3.47Å; T66-T70 PolarHBondContact O-N 2.67Å; T66-T70 PolarHBondContact O-OG1 3.3Å
67Q79.2Confident74.5Confident111 Ų11184.3 Ų84.352%0.51948%0.475SS..Hα-helixtrans-58.1-44.2-179.5-174.7-178.9-5.100113R63 Y64 Q72R63-Q67 WeakPolarHBondContact O-CB 3.28Å; R63-Q67 PolarHBondContact O-N 3Å; Y64-Q67 WeakPolarHBondContact O-CB 3.43Å; Y64-Q67 PolarHBondContact O-N 3.02Å; Q67-Q72 HydrophobicContact CG-CB 4Å; Q67-Q72 HydrophobicContact CG-CG 3.96Å; Q67-Q72 WeakPolarHBondContact O-CB 3.3Å; Q67-Q72 PolarHBondContact O-N 3.37Å
68V75.1Confident72.8Confident41 Ų4186.4 Ų86.425%0.24849%0.492CS..Hα-helixtrans-80.7-30.6-177.9-58.20000113Y64 L65 T66Y64-V68 HydrophobicContact CD1-CG2 4.36Å; Y64-V68 HydrophobicContact CD2-CG1 3.91Å; Y64-V68 HydrophobicContact CE1-CG1 4.12Å; Y64-V68 HydrophobicContact CE1-CG2 4.05Å; Y64-V68 HydrophobicContact CE2-CG1 3.41Å; Y64-V68 VanDerWaalsContact CE2-CG1 3.41Å; Y64-V68 HydrophobicContact CG-CG1 4.49Å; Y64-V68 WeakPolarHBondContact O-CG2 3Å; Y64-V68 PolarHBondContact O-N 3.31Å; L65-V68 PolarHBondContact O-N 2.96Å; T66-V68 PolarHBondContact O-N 3.45Å
69A71.1Confident71.5Confident85 Ų8590.9 Ų90.970%0.70251%0.505SS*.Hα-helixtrans-78.3-29178.300000112.6L65 T66 G71L65-A69 WeakPolarHBondContact O-CA 3.42Å; L65-A69 WeakPolarHBondContact O-CB 3.48Å; L65-A69 PolarHBondContact O-N 3.13Å; T66-A69 PolarHBondContact O-N 3.1Å; A69-G71 PolarHBondContact O-N 3.13Å
70T66.8Low70.1Confident109 Ų10991.1 Ų91.167%0.66951%0.507SS*.THydrogen-bonded Turntrans-85.913.4176.665.40000113.6T66T66-T70 HydrophobicContact CG2-CG2 4.23Å; T66-T70 WeakPolarHBondContact O-CB 3.49Å; T66-T70 VanDerWaalsContact O-CG2 3.28Å; T66-T70 WeakPolarHBondContact O-CG2 3.47Å; T66-T70 PolarHBondContact O-N 2.67Å; T66-T70 PolarHBondContact O-OG1 3.3Å
71G54Low69.4Low58 Ų5892 Ų9260%0.59852%0.517SS*.THydrogen-bonded Turntrans84.823.2166.800000116.3A69A69-G71 PolarHBondContact O-N 3.13Å
72Q50.3Low69.1Low115 Ų11599.4 Ų99.454%0.53754%0.544SS..  trans-63.7127.3162.3-76.3-71.8-31.500108.5Q67 H74Q67-Q72 HydrophobicContact CG-CB 4Å; Q67-Q72 HydrophobicContact CG-CG 3.96Å; Q67-Q72 WeakPolarHBondContact O-CB 3.3Å; Q67-Q72 PolarHBondContact O-N 3.37Å; Q72-H74 VanDerWaalsContact C-N 3.31Å; Q72-H74 PolarHBondContact O-N 3.41Å; Q72-H74 PolarHBondContact O-ND1 2.95Å; Q72-H74 VanDerWaalsContact O-ND1 3.17Å
73P48.5Very low68.8Low89 Ų8999.6 Ų99.658%0.57854%0.541SS*.  trans-69.494.8-176.628.2-31.2000107.7E75P73-E75 PolarHBondContact O-N 2.71Å; P73-E75 VanDerWaalsContact O-N 3.13Å
74H55.7Low68.8Low106 Ų10695.7 Ų95.749%0.49153%0.532SS..  trans-51.3119.6149.739.8-58.5000104.9Q72 G76 S77Q72-H74 VanDerWaalsContact C-N 3.31Å; Q72-H74 PolarHBondContact O-N 3.41Å; Q72-H74 PolarHBondContact O-ND1 2.95Å; Q72-H74 VanDerWaalsContact O-ND1 3.17Å; H74-G76 PolarHBondContact O-N 3.49Å; H74-S77 VanDerWaalsContact CD2-CB 3.4Å; H74-S77 WeakPolarHBondContact CD2-CB 3.28Å; H74-S77 WeakPolarHBondContact NE2-CB 3.27Å; H74-S77 PolarHBondContact O-N 3.5Å; H74-S77 VanDerWaalsContact O-N 3.1Å
75E50.2Low69Low210 Ų21095.5 Ų95.598%0.98154%0.541SS*.THydrogen-bonded Turntrans-61.323.9-171.2-65.1177146.800114.3P73P73-E75 PolarHBondContact O-N 2.71Å; P73-E75 VanDerWaalsContact O-N 3.13Å
76G56.3Low69.5Low70 Ų7095.3 Ų95.372%0.72254%0.538SS*.THydrogen-bonded Turntrans-160.229.3176.600000113.8H74 T78H74-G76 PolarHBondContact O-N 3.49Å; G76-T78 PolarHBondContact O-N 2.9Å
77S57.2Low70.1Confident13 Ų1395 Ų959%0.09153%0.532CS..  trans-67.3131.9176.675.30000111H74 Y79 S80 A81H74-S77 VanDerWaalsContact CD2-CB 3.4Å; H74-S77 WeakPolarHBondContact CD2-CB 3.28Å; H74-S77 WeakPolarHBondContact NE2-CB 3.27Å; H74-S77 PolarHBondContact O-N 3.5Å; H74-S77 VanDerWaalsContact O-N 3.1Å; S77-Y79 PolarHBondContact O-N 2.79Å; S77-S80 PolarHBondContact O-N 3.29Å; S77-S80 PolarHBondContact OG-N 3.25Å; S77-S80 VanDerWaalsContact OG-N 3.1Å; S77-A81 PolarHBondContact O-N 3.1Å
78T60Low70.9Confident105 Ų10592.3 Ų92.364%0.64453%0.529SS*.Hα-helixtrans-47.7-27.7167.4-55.20000111.7G76 R82G76-T78 PolarHBondContact O-N 2.9Å; T78-R82 WeakPolarHBondContact O-CB 3.4Å; T78-R82 PolarHBondContact O-N 2.94Å
79Y67.1Low72Confident161 Ų16194.8 Ų94.863%0.63154%0.54SS*.Hα-helixtrans-65.6-45.9174.3-176.7-102.7000113.2S77 R82 K83S77-Y79 PolarHBondContact O-N 2.79Å; Y79-R82 PolarHBondContact O-N 3.31Å; Y79-K83 VanDerWaalsContact O-CB 3.27Å; Y79-K83 WeakPolarHBondContact O-CB 3.2Å; Y79-K83 PolarHBondContact O-N 2.95Å
80S67.4Low73.2Confident53 Ų5395.2 Ų95.237%0.37153%0.531SS..Hα-helixtrans-61.2-49.4175.8-161.10000110.7S77 R82 K83 D84S77-S80 PolarHBondContact O-N 3.29Å; S77-S80 PolarHBondContact OG-N 3.25Å; S77-S80 VanDerWaalsContact OG-N 3.1Å; S80-R82 VanDerWaalsContact C-N 3.3Å; S80-R82 PolarHBondContact O-N 3.42Å; S80-K83 PolarHBondContact O-N 2.83Å; S80-K83 VanDerWaalsContact O-N 3.16Å; S80-D84 WeakPolarHBondContact O-CB 3.33Å; S80-D84 VanDerWaalsContact O-CG 3.23Å; S80-D84 PolarHBondContact O-N 3.49Å
81A77.8Confident74.7Confident64 Ų6498.3 Ų98.353%0.52953%0.53SS..Hα-helixtrans-59.9-39.7177.100000112.4S77 C85S77-A81 PolarHBondContact O-N 3.1Å; A81-C85 WeakPolarHBondContact O-CB 3.06Å; A81-C85 PolarHBondContact O-N 3.21Å
82R82.4Confident76.8Confident173 Ų17398.4 Ų98.465%0.65353%0.525SS*.Hα-helixtrans-68.1-40.9176.2-167.6-166-61-1710.4111.6T78 Y79 S80 C85 Q86T78-R82 WeakPolarHBondContact O-CB 3.4Å; T78-R82 PolarHBondContact O-N 2.94Å; Y79-R82 PolarHBondContact O-N 3.31Å; S80-R82 VanDerWaalsContact C-N 3.3Å; S80-R82 PolarHBondContact O-N 3.42Å; R82-C85 PolarHBondContact O-N 3.23Å; R82-Q86 WeakPolarHBondContact O-CB 3.29Å; R82-Q86 PolarHBondContact O-N 2.88Å
83K84.6Confident79.1Confident110 Ų11097.6 Ų97.648%0.47852%0.521SS..Hα-helixtrans-66.2-43.7176.8-175.6-170175-171.70111Y79 S80 Q86 M87Y79-K83 VanDerWaalsContact O-CB 3.27Å; Y79-K83 WeakPolarHBondContact O-CB 3.2Å; Y79-K83 PolarHBondContact O-N 2.95Å; S80-K83 PolarHBondContact O-N 2.83Å; S80-K83 VanDerWaalsContact O-N 3.16Å; K83-Q86 PolarHBondContact O-N 2.97Å; K83-M87 HydrophobicContact CG-CE 4.29Å; K83-M87 WeakPolarHBondContact O-CG 3.41Å; K83-M87 PolarHBondContact O-N 2.93Å
84D87.3Confident81.4Confident84 Ų84100.6 Ų100.645%0.44952%0.522SS..Hα-helixtrans-63.9-43.2177.1-67.9-26.1000110.7S80 M87 A88S80-D84 WeakPolarHBondContact O-CB 3.33Å; S80-D84 VanDerWaalsContact O-CG 3.23Å; S80-D84 PolarHBondContact O-N 3.49Å; D84-M87 PolarHBondContact O-N 2.82Å; D84-M87 VanDerWaalsContact OD1-CE 3.28Å; D84-M87 WeakPolarHBondContact OD1-CE 3.39Å; D84-A88 WeakPolarHBondContact O-CB 3.09Å; D84-A88 PolarHBondContact O-N 2.85Å
85C90.3Very high83.4Confident72 Ų7299.9 Ų99.949%0.48653%0.525SS..Hα-helixtrans-59.7-45.9171.3-175.60000111.9A81 R82 M87 A88 L89A81-C85 WeakPolarHBondContact O-CB 3.06Å; A81-C85 PolarHBondContact O-N 3.21Å; R82-C85 PolarHBondContact O-N 3.23Å; C85-M87 VanDerWaalsContact C-N 3.35Å; C85-M87 PolarHBondContact O-N 3.16Å; C85-A88 WeakPolarHBondContact O-CB 3.42Å; C85-A88 PolarHBondContact O-N 3.45Å; C85-L89 WeakPolarHBondContact O-CB 3.4Å; C85-L89 PolarHBondContact O-N 2.74Å
86Q94.4Very high85.7Confident98 Ų9897.3 Ų97.346%0.45851%0.507SS..Hα-helixtrans-62.1-41.3177.5-173.86352.500112R82 K83 L89 N90R82-Q86 WeakPolarHBondContact O-CB 3.29Å; R82-Q86 PolarHBondContact O-N 2.88Å; K83-Q86 PolarHBondContact O-N 2.97Å; Q86-L89 PolarHBondContact O-N 3.34Å; Q86-N90 PolarHBondContact NE2-OD1 3.5Å; Q86-N90 PolarHBondContact O-N 2.83Å; Q86-N90 PolarHBondContact O-OD1 3.43Å
87M96.2Very high87.7Confident68 Ų6896.9 Ų96.934%0.33549%0.49SS..Hα-helixtrans-66.5-40.1175.5-74.6-169.3-6300111.6K83 D84 C85 N90 R91K83-M87 HydrophobicContact CG-CE 4.29Å; K83-M87 WeakPolarHBondContact O-CG 3.41Å; K83-M87 PolarHBondContact O-N 2.93Å; D84-M87 PolarHBondContact O-N 2.82Å; D84-M87 VanDerWaalsContact OD1-CE 3.28Å; D84-M87 WeakPolarHBondContact OD1-CE 3.39Å; C85-M87 VanDerWaalsContact C-N 3.35Å; C85-M87 PolarHBondContact O-N 3.16Å; M87-N90 PolarHBondContact O-N 3Å; M87-R91 VanDerWaalsContact O-CG 3.29Å; M87-R91 WeakPolarHBondContact O-CG 3.44Å; M87-R91 PolarHBondContact O-N 3.33Å
88A96.8Very high89.6Confident55 Ų55100.4 Ų100.446%0.45550%0.504SS..Hα-helixtrans-62.2-43.3174.600000111.5D84 C85 R91 A92D84-A88 WeakPolarHBondContact O-CB 3.09Å; D84-A88 PolarHBondContact O-N 2.85Å; C85-A88 WeakPolarHBondContact O-CB 3.42Å; C85-A88 PolarHBondContact O-N 3.45Å; A88-R91 PolarHBondContact O-N 3.35Å; A88-A92 WeakPolarHBondContact O-CB 3.21Å; A88-A92 PolarHBondContact O-N 3.02Å
89L97.3Very high91.4Very high93 Ų93101.1 Ų101.149%0.48750%0.503SS..Hα-helixtrans-59-48.6173.3-90.7156.5000112C85 Q86 R91 A92 E93C85-L89 WeakPolarHBondContact O-CB 3.4Å; C85-L89 PolarHBondContact O-N 2.74Å; Q86-L89 PolarHBondContact O-N 3.34Å; L89-R91 VanDerWaalsContact C-N 3.3Å; L89-R91 PolarHBondContact O-N 2.99Å; L89-A92 PolarHBondContact O-N 3.32Å; L89-E93 PolarHBondContact O-N 3.47Å
90N97.4Very high92.8Very high94 Ų9495.1 Ų95.150%0.50349%0.49SS..Hα-helixtrans-60.8-40.4178.4-68.4-4.7000111.7Q86 M87 Y94Q86-N90 PolarHBondContact NE2-OD1 3.5Å; Q86-N90 PolarHBondContact O-N 2.83Å; Q86-N90 PolarHBondContact O-OD1 3.43Å; M87-N90 PolarHBondContact O-N 3Å; N90-Y94 WeakPolarHBondContact O-CB 3.4Å; N90-Y94 PolarHBondContact O-N 3.17Å
91R97.8Very high94.2Very high173 Ų17396.1 Ų96.165%0.65349%0.489SS*.Hα-helixtrans-65.5-42.2175.4-72.4173.2-175.8174.82.5111.7M87 A88 L89 Y94 T95M87-R91 VanDerWaalsContact O-CG 3.29Å; M87-R91 WeakPolarHBondContact O-CG 3.44Å; M87-R91 PolarHBondContact O-N 3.33Å; A88-R91 PolarHBondContact O-N 3.35Å; L89-R91 VanDerWaalsContact C-N 3.3Å; L89-R91 PolarHBondContact O-N 2.99Å; R91-Y94 PolarHBondContact O-N 3.37Å; R91-T95 PolarHBondContact O-N 3.32Å; R91-T95 PolarHBondContact O-OG1 2.79Å; R91-T95 VanDerWaalsContact O-OG1 3.07Å
92A97.7Very high95Very high60 Ų6097.8 Ų97.850%0.49649%0.489SS..Hα-helixtrans-63-45.2177.900000111.7A88 L89 Y94 T95 R96A88-A92 WeakPolarHBondContact O-CB 3.21Å; A88-A92 PolarHBondContact O-N 3.02Å; L89-A92 PolarHBondContact O-N 3.32Å; A92-Y94 PolarHBondContact O-N 3.07Å; A92-T95 PolarHBondContact O-N 2.86Å; A92-R96 WeakPolarHBondContact O-CB 3.44Å; A92-R96 PolarHBondContact O-N 2.9Å
93E97.7Very high95.6Very high98 Ų9891.1 Ų91.146%0.45847%0.473SS..Hα-helixtrans-60.7-44.4174.2-88.5-62.3157.200112L89 T95 R96 V97L89-E93 PolarHBondContact O-N 3.47Å; E93-T95 VanDerWaalsContact C-N 3.35Å; E93-T95 PolarHBondContact O-N 3.38Å; E93-R96 WeakPolarHBondContact O-CB 3.5Å; E93-R96 PolarHBondContact O-N 2.92Å; E93-R96 IonicContact OE1-NE 2.74Å; E93-R96 IonicContact OE1-NH2 3.81Å; E93-R96 IonicContact OE2-CZ 2.79Å; E93-R96 VanDerWaalsContact OE2-CZ 3.27Å; E93-R96 IonicContact OE2-NE 3.76Å; E93-R96 PolarHBondContact OE2-NE 3.31Å; E93-R96 IonicContact OE2-NH2 2.67Å; E93-R96 PolarHBondContact OE2-NH2 3.36Å; E93-V97 WeakPolarHBondContact O-CG2 3.41Å; E93-V97 PolarHBondContact O-N 2.96Å
94Y97.8Very high96.1Very high152 Ų15293.1 Ų93.160%0.59648%0.478SS*.Hα-helixtrans-59.7-45.3176.9-177.4-102.2000112.1N90 R91 A92 R96 V97 K98N90-Y94 WeakPolarHBondContact O-CB 3.4Å; N90-Y94 PolarHBondContact O-N 3.17Å; R91-Y94 PolarHBondContact O-N 3.37Å; A92-Y94 PolarHBondContact O-N 3.07Å; Y94-R96 VanDerWaalsContact C-N 3.34Å; Y94-R96 PolarHBondContact O-N 3.33Å; Y94-V97 PolarHBondContact O-N 2.96Å; Y94-K98 HydrophobicContact CD1-CG 4.3Å; Y94-K98 HydrophobicContact CE1-CG 3.87Å; Y94-K98 HydrophobicContact CE2-CG 4.3Å; Y94-K98 WeakPolarHBondContact O-CG 3.42Å; Y94-K98 PolarHBondContact O-N 2.89Å; Y94-K98 WeakPolarHBondContact OH-CE 3.48Å
95T98.1Very high96.3Very high91 Ų9192.8 Ų92.856%0.55848%0.479SS*.Hα-helixtrans-61.6-41.9175.5-60.20000111.6R91 A92 E93 V97 K98 L99R91-T95 PolarHBondContact O-N 3.32Å; R91-T95 PolarHBondContact O-OG1 2.79Å; R91-T95 VanDerWaalsContact O-OG1 3.07Å; A92-T95 PolarHBondContact O-N 2.86Å; E93-T95 VanDerWaalsContact C-N 3.35Å; E93-T95 PolarHBondContact O-N 3.38Å; T95-V97 PolarHBondContact O-N 3.17Å; T95-K98 PolarHBondContact O-N 3.47Å; T95-L99 WeakPolarHBondContact O-CB 3.48Å; T95-L99 PolarHBondContact O-N 2.94Å
96R97.8Very high96.4Very high156 Ų15692 Ų9259%0.58947%0.474SS*.Hα-helixtrans-59.3-46176.5-173.1-170.269.386.21.6111.5A92 E93 Y94 L99 G100A92-R96 WeakPolarHBondContact O-CB 3.44Å; A92-R96 PolarHBondContact O-N 2.9Å; E93-R96 WeakPolarHBondContact O-CB 3.5Å; E93-R96 PolarHBondContact O-N 2.92Å; E93-R96 IonicContact OE1-NE 2.74Å; E93-R96 IonicContact OE1-NH2 3.81Å; E93-R96 IonicContact OE2-CZ 2.79Å; E93-R96 VanDerWaalsContact OE2-CZ 3.27Å; E93-R96 IonicContact OE2-NE 3.76Å; E93-R96 PolarHBondContact OE2-NE 3.31Å; E93-R96 IonicContact OE2-NH2 2.67Å; E93-R96 PolarHBondContact OE2-NH2 3.36Å; Y94-R96 VanDerWaalsContact C-N 3.34Å; Y94-R96 PolarHBondContact O-N 3.33Å; R96-L99 PolarHBondContact O-N 3.1Å; R96-G100 PolarHBondContact O-N 3Å
97V98Very high96.3Very high61 Ų6193.6 Ų93.637%0.3748%0.481SS..Hα-helixtrans-60.6-48.7176.7171.10000110.7E93 Y94 T95 L99 G100 E101E93-V97 WeakPolarHBondContact O-CG2 3.41Å; E93-V97 PolarHBondContact O-N 2.96Å; Y94-V97 PolarHBondContact O-N 2.96Å; T95-V97 PolarHBondContact O-N 3.17Å; V97-L99 VanDerWaalsContact C-N 3.34Å; V97-L99 PolarHBondContact O-N 3.42Å; V97-G100 PolarHBondContact O-N 3.3Å; V97-G100 VanDerWaalsContact O-N 3.17Å; V97-E101 PolarHBondContact O-N 3.04Å
98K97.9Very high95.9Very high88 Ų8895.7 Ų95.738%0.38350%0.498SS..Hα-helixtrans-63.8-37.8-179.6-71-67.8165.7-155.90113Y94 T95 G100 E101 L102Y94-K98 HydrophobicContact CD1-CG 4.3Å; Y94-K98 HydrophobicContact CE1-CG 3.87Å; Y94-K98 HydrophobicContact CE2-CG 4.3Å; Y94-K98 WeakPolarHBondContact O-CG 3.42Å; Y94-K98 PolarHBondContact O-N 2.89Å; Y94-K98 WeakPolarHBondContact OH-CE 3.48Å; T95-K98 PolarHBondContact O-N 3.47Å; K98-G100 VanDerWaalsContact C-N 3.35Å; K98-E101 WeakPolarHBondContact CD-OE2 3.38Å; K98-E101 IonicContact NZ-OE1 3.51Å; K98-E101 IonicContact NZ-OE2 3.27Å; K98-E101 PolarHBondContact NZ-OE2 3.19Å; K98-E101 PolarHBondContact O-N 3.44Å; K98-L102 PolarHBondContact O-N 3.42Å
99L97.3Very high95.3Very high119 Ų119100.2 Ų100.262%0.62351%0.511SS*.Hα-helixtrans-66.1-38.9175-169.365.4000111.7T95 R96 V97 L102 G103T95-L99 WeakPolarHBondContact O-CB 3.48Å; T95-L99 PolarHBondContact O-N 2.94Å; R96-L99 PolarHBondContact O-N 3.1Å; V97-L99 VanDerWaalsContact C-N 3.34Å; V97-L99 PolarHBondContact O-N 3.42Å; L99-L102 PolarHBondContact O-N 2.88Å; L99-G103 PolarHBondContact O-N 2.92Å
100G96.6Very high94.5Very high36 Ų36102.5 Ų102.537%0.37152%0.523SS..Hα-helixtrans-68.4-31.7174.800000114.1R96 V97 K98 R104R96-G100 PolarHBondContact O-N 3Å; V97-G100 PolarHBondContact O-N 3.3Å; V97-G100 VanDerWaalsContact O-N 3.17Å; K98-G100 VanDerWaalsContact C-N 3.35Å; G100-R104 WeakPolarHBondContact O-CG 3.33Å; G100-R104 PolarHBondContact O-N 2.99Å; G100-R104 PolarHBondContact O-NE 3.19Å; G100-R104 VanDerWaalsContact O-NE 3.1Å
101E96.7Very high93.2Very high73 Ų73104.1 Ų104.134%0.34153%0.532SS..Hα-helixtrans-66-44.1169.3-72.5172.4-174.700111.5V97 K98 T105V97-E101 PolarHBondContact O-N 3.04Å; K98-E101 WeakPolarHBondContact CD-OE2 3.38Å; K98-E101 IonicContact NZ-OE1 3.51Å; K98-E101 IonicContact NZ-OE2 3.27Å; K98-E101 PolarHBondContact NZ-OE2 3.19Å; K98-E101 PolarHBondContact O-N 3.44Å; E101-T105 PolarHBondContact O-N 2.85Å; E101-T105 VanDerWaalsContact O-N 3.1Å; E101-T105 PolarHBondContact O-OG1 3.43Å
102L95.8Very high91.5Very high100 Ų100101.1 Ų101.152%0.52454%0.535SS..Hα-helixtrans-64.8-45.2178.1-177.861.7000111.8K98 L99 R104 T105 C106K98-L102 PolarHBondContact O-N 3.42Å; L99-L102 PolarHBondContact O-N 2.88Å; L102-R104 VanDerWaalsContact C-N 3.34Å; L102-R104 PolarHBondContact O-N 3.34Å; L102-T105 WeakPolarHBondContact O-CB 3.38Å; L102-T105 PolarHBondContact O-N 2.89Å; L102-T105 VanDerWaalsContact O-N 3.08Å; L102-C106 PolarHBondContact O-N 3.08Å; L102-C106 PolarHBondContact O-SG 3.31Å; L102-C106 VanDerWaalsContact O-SG 3.38Å
103G94.9Very high89.8Confident32 Ų32107.2 Ų107.233%0.3355%0.553SS.*Hα-helixtrans-56.1-47.3177.700000112.3L99 T105 C106 E107L99-G103 PolarHBondContact O-N 2.92Å; G103-T105 VanDerWaalsContact C-N 3.31Å; G103-T105 PolarHBondContact O-N 3.39Å; G103-C106 WeakPolarHBondContact O-CB 3.32Å; G103-C106 PolarHBondContact O-N 3.41Å; G103-E107 WeakPolarHBondContact O-CG 3.43Å; G103-E107 PolarHBondContact O-N 3.1Å
104R93.8Very high87.9Confident152 Ų152112 Ų11257%0.57459%0.593SS**Hα-helixtrans-60.5-39.7174.8-75.1-179.2-74.5164.1-3.6112.6G100 L102 E107 V108G100-R104 WeakPolarHBondContact O-CG 3.33Å; G100-R104 PolarHBondContact O-N 2.99Å; G100-R104 PolarHBondContact O-NE 3.19Å; G100-R104 VanDerWaalsContact O-NE 3.1Å; L102-R104 VanDerWaalsContact C-N 3.34Å; L102-R104 PolarHBondContact O-N 3.34Å; R104-E107 PolarHBondContact O-N 3.19Å; R104-V108 WeakPolarHBondContact O-CG2 3.5Å; R104-V108 PolarHBondContact O-N 3.33Å; R104-V108 VanDerWaalsContact O-N 3.08Å
105T93Very high87.4Confident77 Ų77110 Ų11047%0.47259%0.593SS.*Hα-helixtrans-63.6-44.4176.4-54.10000111E101 L102 G103 V108 M109E101-T105 PolarHBondContact O-N 2.85Å; E101-T105 VanDerWaalsContact O-N 3.1Å; E101-T105 PolarHBondContact O-OG1 3.43Å; L102-T105 WeakPolarHBondContact O-CB 3.38Å; L102-T105 PolarHBondContact O-N 2.89Å; L102-T105 VanDerWaalsContact O-N 3.08Å; G103-T105 VanDerWaalsContact C-N 3.31Å; G103-T105 PolarHBondContact O-N 3.39Å; T105-V108 PolarHBondContact O-N 3.08Å; T105-M109 HydrophobicContact CG2-SD 4.25Å; T105-M109 WeakPolarHBondContact O-CG 3.46Å; T105-M109 PolarHBondContact O-N 3.38Å
106C91.9Very high86.8Confident56 Ų56111 Ų11138%0.37859%0.594SS.*Hα-helixtrans-62.5-42.6177-68.10000112L102 G103 V108 M109 L110L102-C106 PolarHBondContact O-N 3.08Å; L102-C106 PolarHBondContact O-SG 3.31Å; L102-C106 VanDerWaalsContact O-SG 3.38Å; G103-C106 WeakPolarHBondContact O-CB 3.32Å; G103-C106 PolarHBondContact O-N 3.41Å; C106-V108 PolarHBondContact O-N 2.86Å; C106-M109 PolarHBondContact O-N 3.04Å; C106-L110 VanDerWaalsContact O-CB 3.31Å; C106-L110 WeakPolarHBondContact O-CB 3.46Å; C106-L110 WeakPolarHBondContact O-CD1 3.31Å; C106-L110 WeakPolarHBondContact O-CG 3.2Å; C106-L110 PolarHBondContact O-N 3.49Å
107E90.9Very high86.2Confident132 Ų132108.5 Ų108.562%0.61760%0.595SS**Hα-helixtrans-58-47.4175.1-73.5170.5177.100111.4G103 R104 M109 L110 D111G103-E107 WeakPolarHBondContact O-CG 3.43Å; G103-E107 PolarHBondContact O-N 3.1Å; R104-E107 PolarHBondContact O-N 3.19Å; E107-M109 VanDerWaalsContact C-N 3.28Å; E107-M109 PolarHBondContact O-N 3.01Å; E107-L110 PolarHBondContact O-N 2.94Å; E107-L110 VanDerWaalsContact O-N 3.15Å; E107-D111 PolarHBondContact O-N 3.15Å
108V89.1Confident85.5Confident112 Ų112111.3 Ų111.368%0.67961%0.608SS**Hα-helixtrans-61.9-35.1176.6171.40000112.4R104 T105 C106R104-V108 WeakPolarHBondContact O-CG2 3.5Å; R104-V108 PolarHBondContact O-N 3.33Å; R104-V108 VanDerWaalsContact O-N 3.08Å; T105-V108 PolarHBondContact O-N 3.08Å; C106-V108 PolarHBondContact O-N 2.86Å
109M82.9Confident84.8Confident150 Ų150112.8 Ų112.874%0.73962%0.622SS**Hα-helixtrans-76.6-25.5177.5-70.4-17775.500113.2T105 C106 E107T105-M109 HydrophobicContact CG2-SD 4.25Å; T105-M109 WeakPolarHBondContact O-CG 3.46Å; T105-M109 PolarHBondContact O-N 3.38Å; C106-M109 PolarHBondContact O-N 3.04Å; E107-M109 VanDerWaalsContact C-N 3.28Å; E107-M109 PolarHBondContact O-N 3.01Å
110L80.9Confident83.9Confident140 Ų140112.3 Ų112.373%0.73362%0.622SS**Hα-helixtrans-92.1-18.6-176.5-72.5168.3000113.6C106 E107 P112C106-L110 VanDerWaalsContact O-CB 3.31Å; C106-L110 WeakPolarHBondContact O-CB 3.46Å; C106-L110 WeakPolarHBondContact O-CD1 3.31Å; C106-L110 WeakPolarHBondContact O-CG 3.2Å; C106-L110 PolarHBondContact O-N 3.49Å; E107-L110 PolarHBondContact O-N 2.94Å; E107-L110 VanDerWaalsContact O-N 3.15Å; L110-P112 VanDerWaalsContact O-CD 3.29Å; L110-P112 WeakPolarHBondContact O-CD 3.29Å
111D70.1Confident83Confident128 Ų128117.8 Ų117.868%0.68464%0.64SS**SBendtrans-96.293.2163.6-97.1-23.6000108.8E107 Q113E107-D111 PolarHBondContact O-N 3.15Å; D111-Q113 PolarHBondContact O-N 2.93Å
112P61.9Low82Confident111 Ų111121.2 Ų121.272%0.72166%0.663SS**  trans-66.4113.1170.39.25.9000106.6L110L110-P112 VanDerWaalsContact O-CD 3.29Å; L110-P112 WeakPolarHBondContact O-CD 3.29Å
113Q63.2Low80.8Confident187 Ų187123 Ų12387%0.87467%0.674SS**  trans-54132.5167.4-74.3-169.9-6400108.7D111D111-Q113 PolarHBondContact O-N 2.93Å
114P57.4Low79.6Confident199 Ų199131.3 Ų131.3100%1.29271%0.706SS**  trans-66.20172.228.1-33.4000112.5

Retrieved 114 of 114 residues in 585.9 ms (Link to these results)