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U1 small nuclear ribonucleoprotein C

Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. snrpc/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates E complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.

AlphaFold DB , UniProt , Accession A0A060WKM4, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene SNRPC, Length 157 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M62.4Low85Confident215 Ų21590.5 Ų90.5100%1.05945%0.452SS*.  01140-150.278.285.700107.5K3M1-K3 PolarHBondContact O-N 3.24Å; M1-K3 VanDerWaalsContact O-N 3.14Å
2P67.7Low85.4Confident104 Ų10496.7 Ų96.768%0.67547%0.468SS*.PPolyproline II helixtrans-63.9116.3-179.425.1-30.4000109D16P2-D16 WeakPolarHBondContact O-CB 3.16Å
3K79Confident85.6Confident156 Ų15691 Ų9168%0.67844%0.441SS*.PPolyproline II helixtrans-103.2121.8172.3-67.2-179.7-179.7178.70106.3M1 Y5 Y12M1-K3 PolarHBondContact O-N 3.24Å; M1-K3 VanDerWaalsContact O-N 3.14Å; K3-Y5 PolarHBondContact O-N 3Å; K3-Y12 HydrophobicContact CB-CD1 4.48Å
4F86.2Confident85.5Confident60 Ų6093.3 Ų93.326%0.26346%0.464SS..PPolyproline II helixtrans-75.3124.7175.7175.3-96.9000109.5C6 L13 D16 R21F4-C6 HydrophobicContact CE1-CB 4.03Å; F4-L13 HydrophobicContact CB-CB 4.21Å; F4-L13 HydrophobicContact CB-CD2 4.45Å; F4-L13 HydrophobicContact CD1-CB 4.04Å; F4-L13 HydrophobicContact CD1-CD2 3.87Å; F4-L13 WeakPolarHBondContact O-CB 3.46Å; F4-L13 PolarHBondContact O-N 3.16Å; F4-D16 HydrophobicContact CB-CB 4.26Å; F4-D16 VanDerWaalsContact CB-OD1 3.23Å; F4-D16 WeakPolarHBondContact CB-OD1 3.36Å; F4-R21 HydrophobicContact CD1-CG 4.05Å; F4-R21 HydrophobicContact CD2-CG 4.14Å; F4-R21 HydrophobicContact CE1-CG 4.26Å; F4-R21 HydrophobicContact CE2-CG 4.36Å; F4-R21 HydrophobicContact CG-CG 3.98Å; F4-R21 HydrophobicContact CZ-CG 4.42Å
5Y90.4Very high85.4Confident73 Ų7395.9 Ų95.929%0.28647%0.473SS..EExtended strand (participates in β ladder)trans-101.2139.6170.5-175.9-103.7000108.8K3 D10 Y12K3-Y5 PolarHBondContact O-N 3Å; Y5-D10 VanDerWaalsContact OH-CA 3.23Å; Y5-D10 WeakPolarHBondContact OH-CA 3.43Å; Y5-D10 PolarHBondContact OH-OD1 3.42Å; Y5-Y12 AromaticContact CD2-CD1 3.72Å; Y5-Y12 HydrophobicContact CD2-CD1 3.72Å; Y5-Y12 HydrophobicContact CD2-CD2 4Å; Y5-Y12 AromaticContact CD2-CE1 3.58Å; Y5-Y12 HydrophobicContact CD2-CE1 3.58Å; Y5-Y12 AromaticContact CD2-CE2 3.85Å; Y5-Y12 HydrophobicContact CD2-CE2 3.85Å; Y5-Y12 AromaticContact CD2-CG 3.94Å; Y5-Y12 HydrophobicContact CD2-CG 3.94Å; Y5-Y12 AromaticContact CD2-CZ 3.64Å; Y5-Y12 HydrophobicContact CE2-CD2 4.24Å; Y5-Y12 HydrophobicContact CE2-CE1 4.4Å; Y5-Y12 AromaticContact CE2-CE2 3.92Å; Y5-Y12 HydrophobicContact CE2-CE2 3.92Å; Y5-Y12 HydrophobicContact CG-CD1 4.4Å; Y5-Y12 HydrophobicContact CG-CE1 4.16Å
6C92.4Very high85.2Confident5 Ų593.3 Ų93.33%0.03446%0.462CS..EExtended strand (participates in β ladder)trans-110.6113.5172.6178.60000109.9F4 Y8 C9 D10 T11 H24 H30F4-C6 HydrophobicContact CE1-CB 4.03Å; C6-Y8 VanDerWaalsContact C-N 3.3Å; C6-Y8 PolarHBondContact O-N 3.44Å; C6-C9 HydrophobicContact CB-CB 4.08Å; C6-C9 PolarHBondContact O-N 3.25Å; C6-C9 VanDerWaalsContact O-N 3.14Å; C6-D10 PolarHBondContact O-N 3.5Å; C6-T11 PolarHBondContact N-O 3Å; C6-T11 VanDerWaalsContact N-O 3.15Å; C6-H24 VanDerWaalsContact CB-NE2 3.29Å; C6-H24 WeakPolarHBondContact CB-NE2 3.35Å; C6-H24 PolarHBondContact SG-NE2 2.86Å; C6-H30 PolarHBondContact SG-CE1 3.29Å; C6-H30 PolarHBondContact SG-ND1 3.16Å
7D92.1Very high85.3Confident120 Ų12090.6 Ų90.664%0.64245%0.454SS*.THydrogen-bonded Turntrans-64.1-31.7-178.3-53.4-81.1000113.2C9D7-C9 VanDerWaalsContact C-N 3.32Å; D7-C9 PolarHBondContact O-N 3.17Å
8Y91.3Very high85.3Confident87 Ų8790.4 Ų90.434%0.34146%0.461SS..THydrogen-bonded Turntrans-74.1-24.6177-55.7-68000113.1C6 H30 N33 V34 Y37C6-Y8 VanDerWaalsContact C-N 3.3Å; C6-Y8 PolarHBondContact O-N 3.44Å; Y8-H30 AromaticContact CD2-CE1 3.67Å; Y8-N33 VanDerWaalsContact O-CB 3.23Å; Y8-N33 WeakPolarHBondContact O-CB 3.16Å; Y8-N33 PolarHBondContact O-ND2 3.07Å; Y8-V34 HydrophobicContact CD1-CG2 3.95Å; Y8-V34 HydrophobicContact CD2-CG2 3.69Å; Y8-V34 HydrophobicContact CE1-CG2 4.39Å; Y8-V34 HydrophobicContact CE2-CG2 4.15Å; Y8-V34 HydrophobicContact CG-CG2 3.56Å; Y8-Y37 HydrophobicContact CD1-CD1 4.35Å; Y8-Y37 HydrophobicContact CD1-CG 4.18Å; Y8-Y37 AromaticContact CE1-CD1 3.96Å; Y8-Y37 HydrophobicContact CE1-CD1 3.96Å; Y8-Y37 HydrophobicContact CE1-CE1 4.26Å; Y8-Y37 HydrophobicContact CE1-CG 4.24Å
9C92.3Very high85.4Confident10 Ų1090.1 Ų90.17%0.06847%0.467CS..THydrogen-bonded Turntrans-103.6-12.1-175.6-69.60000113C6 D7 T11 H24C6-C9 HydrophobicContact CB-CB 4.08Å; C6-C9 PolarHBondContact O-N 3.25Å; C6-C9 VanDerWaalsContact O-N 3.14Å; D7-C9 VanDerWaalsContact C-N 3.32Å; D7-C9 PolarHBondContact O-N 3.17Å; C9-T11 HydrophobicContact CB-CG2 4.19Å; C9-T11 WeakPolarHBondContact O-CG2 3.46Å; C9-T11 PolarHBondContact O-N 3.05Å; C9-H24 PolarHBondContact SG-NE2 2.81Å
10D91.4Very high85.6Confident119 Ų11987.8 Ų87.864%0.63646%0.457SS*.THydrogen-bonded Turntrans46.339.4-167.4-69.4-40000113.8Y5 C6Y5-D10 VanDerWaalsContact OH-CA 3.23Å; Y5-D10 WeakPolarHBondContact OH-CA 3.43Å; Y5-D10 PolarHBondContact OH-OD1 3.42Å; C6-D10 PolarHBondContact O-N 3.5Å
11T89.8Confident85.9Confident47 Ų4787.5 Ų87.529%0.28845%0.45SS..EExtended strand (participates in β ladder)trans-128.3141.2-177.2700000112.4C6 C9C6-T11 PolarHBondContact N-O 3Å; C6-T11 VanDerWaalsContact N-O 3.15Å; C9-T11 HydrophobicContact CB-CG2 4.19Å; C9-T11 WeakPolarHBondContact O-CG2 3.46Å; C9-T11 PolarHBondContact O-N 3.05Å
12Y89.7Confident87.2Confident164 Ų16485 Ų8564%0.64343%0.433SS*.EExtended strand (participates in β ladder)trans-82132.4165.9-67.1-83.1000111K3 Y5K3-Y12 HydrophobicContact CB-CD1 4.48Å; Y5-Y12 AromaticContact CD2-CD1 3.72Å; Y5-Y12 HydrophobicContact CD2-CD1 3.72Å; Y5-Y12 HydrophobicContact CD2-CD2 4Å; Y5-Y12 AromaticContact CD2-CE1 3.58Å; Y5-Y12 HydrophobicContact CD2-CE1 3.58Å; Y5-Y12 AromaticContact CD2-CE2 3.85Å; Y5-Y12 HydrophobicContact CD2-CE2 3.85Å; Y5-Y12 AromaticContact CD2-CG 3.94Å; Y5-Y12 HydrophobicContact CD2-CG 3.94Å; Y5-Y12 AromaticContact CD2-CZ 3.64Å; Y5-Y12 HydrophobicContact CE2-CD2 4.24Å; Y5-Y12 HydrophobicContact CE2-CE1 4.4Å; Y5-Y12 AromaticContact CE2-CE2 3.92Å; Y5-Y12 HydrophobicContact CE2-CE2 3.92Å; Y5-Y12 HydrophobicContact CG-CD1 4.4Å; Y5-Y12 HydrophobicContact CG-CE1 4.16Å
13L88.8Confident88.4Confident23 Ų2384.3 Ų84.312%0.1243%0.428CS..  trans-86.1126172.9-164.361.4000109.6F4 H15 V20 R21F4-L13 HydrophobicContact CB-CB 4.21Å; F4-L13 HydrophobicContact CB-CD2 4.45Å; F4-L13 HydrophobicContact CD1-CB 4.04Å; F4-L13 HydrophobicContact CD1-CD2 3.87Å; F4-L13 WeakPolarHBondContact O-CB 3.46Å; F4-L13 PolarHBondContact O-N 3.16Å; L13-H15 VanDerWaalsContact C-N 3.28Å; L13-H15 PolarHBondContact O-N 2.86Å; L13-V20 HydrophobicContact CD1-CG1 3.65Å; L13-V20 HydrophobicContact CD2-CB 4.14Å; L13-V20 HydrophobicContact CD2-CG1 3.5Å; L13-V20 VanDerWaalsContact CD2-CG1 3.5Å; L13-V20 HydrophobicContact CG-CG1 3.71Å; L13-R21 HydrophobicContact CD2-CG 4.09Å
14T83.6Confident89.1Confident123 Ų12378.6 Ų78.676%0.75540%0.403SS*.SBendtrans-67.6-27.4-174.350.50000113.3
15H83.5Confident89.4Confident132 Ų13278.3 Ų78.361%0.61141%0.408SS*.  trans-133.1116.3177.2-63.3-68.1000111L13 S17 V20L13-H15 VanDerWaalsContact C-N 3.28Å; L13-H15 PolarHBondContact O-N 2.86Å; H15-S17 PolarHBondContact O-N 3.28Å; H15-V20 HydrophobicContact CB-CG2 4.48Å; H15-V20 WeakPolarHBondContact O-CB 3.29Å
16D82.9Confident89.5Confident55 Ų5577.8 Ų77.829%0.29442%0.415SS..  trans-85.161.8179.2-168.329.5000112.5P2 F4 R21P2-D16 WeakPolarHBondContact O-CB 3.16Å; F4-D16 HydrophobicContact CB-CB 4.26Å; F4-D16 VanDerWaalsContact CB-OD1 3.23Å; F4-D16 WeakPolarHBondContact CB-OD1 3.36Å; D16-R21 VanDerWaalsContact OD1-CD 3.29Å; D16-R21 WeakPolarHBondContact OD1-CD 3.24Å; D16-R21 IonicContact OD1-CZ 3.38Å; D16-R21 IonicContact OD1-NE 3.65Å; D16-R21 IonicContact OD1-NH1 2.58Å; D16-R21 PolarHBondContact OD1-NH1 3.07Å; D16-R21 IonicContact OD2-NH1 2.95Å; D16-R21 PolarHBondContact OD2-NH1 2.91Å
17S86.7Confident89.6Confident47 Ų4778.8 Ų78.833%0.32943%0.426SS..  trans-97.9142.6172168.20000110.1H15 S19 V20 R21H15-S17 PolarHBondContact O-N 3.28Å; S17-S19 PolarHBondContact O-N 2.82Å; S17-S19 VanDerWaalsContact O-N 3.15Å; S17-S19 PolarHBondContact OG-N 3.2Å; S17-V20 WeakPolarHBondContact O-CA 3.38Å; S17-V20 PolarHBondContact O-N 2.89Å; S17-R21 PolarHBondContact O-N 3.32Å
18P85.9Confident89.7Confident88 Ų8882.1 Ų82.157%0.57143%0.43SS*.Hα-helixtrans-55-33.5177.120.5-32.1000112.8K22P18-K22 WeakPolarHBondContact O-CB 3.38Å; P18-K22 PolarHBondContact O-N 2.77Å
19S86.9Confident89.8Confident83 Ų8383.8 Ų83.858%0.5844%0.439SS*.Hα-helixtrans-65.7-41.9174.4-56.30000111.9S17 K22 T23S17-S19 PolarHBondContact O-N 2.82Å; S17-S19 VanDerWaalsContact O-N 3.15Å; S17-S19 PolarHBondContact OG-N 3.2Å; S19-K22 PolarHBondContact O-N 3.15Å; S19-T23 WeakPolarHBondContact O-CG2 3.25Å; S19-T23 PolarHBondContact O-N 2.81Å; S19-T23 PolarHBondContact O-OG1 2.83Å
20V90Very high90Very high45 Ų4584.5 Ų84.527%0.27344%0.441SS..Hα-helixtrans-70.9-38.2-179.9-174.60000111L13 H15 S17 K22 T23 H24L13-V20 HydrophobicContact CD1-CG1 3.65Å; L13-V20 HydrophobicContact CD2-CB 4.14Å; L13-V20 HydrophobicContact CD2-CG1 3.5Å; L13-V20 VanDerWaalsContact CD2-CG1 3.5Å; L13-V20 HydrophobicContact CG-CG1 3.71Å; H15-V20 HydrophobicContact CB-CG2 4.48Å; H15-V20 WeakPolarHBondContact O-CB 3.29Å; S17-V20 WeakPolarHBondContact O-CA 3.38Å; S17-V20 PolarHBondContact O-N 2.89Å; V20-K22 VanDerWaalsContact C-N 3.35Å; V20-T23 WeakPolarHBondContact CA-OG1 3.48Å; V20-T23 PolarHBondContact O-N 3.25Å; V20-T23 PolarHBondContact O-OG1 2.77Å; V20-H24 VanDerWaalsContact O-CB 3.29Å; V20-H24 WeakPolarHBondContact O-CB 3.48Å; V20-H24 PolarHBondContact O-N 3.25Å
21R90.4Very high90.1Very high81 Ų8184.1 Ų84.131%0.30643%0.434SS..Hα-helixtrans-62.3-43.4171.7-71-171.3-64-120-0.6111.3F4 L13 D16 S17 T23 H24 C25F4-R21 HydrophobicContact CD1-CG 4.05Å; F4-R21 HydrophobicContact CD2-CG 4.14Å; F4-R21 HydrophobicContact CE1-CG 4.26Å; F4-R21 HydrophobicContact CE2-CG 4.36Å; F4-R21 HydrophobicContact CG-CG 3.98Å; F4-R21 HydrophobicContact CZ-CG 4.42Å; L13-R21 HydrophobicContact CD2-CG 4.09Å; D16-R21 VanDerWaalsContact OD1-CD 3.29Å; D16-R21 WeakPolarHBondContact OD1-CD 3.24Å; D16-R21 IonicContact OD1-CZ 3.38Å; D16-R21 IonicContact OD1-NE 3.65Å; D16-R21 IonicContact OD1-NH1 2.58Å; D16-R21 PolarHBondContact OD1-NH1 3.07Å; D16-R21 IonicContact OD2-NH1 2.95Å; D16-R21 PolarHBondContact OD2-NH1 2.91Å; S17-R21 PolarHBondContact O-N 3.32Å; R21-T23 PolarHBondContact O-N 3.46Å; R21-H24 PolarHBondContact O-N 3.11Å; R21-C25 WeakPolarHBondContact O-CB 3.35Å; R21-C25 PolarHBondContact O-N 3Å; R21-C25 PolarHBondContact O-SG 3.26Å; R21-C25 VanDerWaalsContact O-SG 3.33Å
22K91.1Very high90.3Very high162 Ų16286.5 Ų86.570%0.70444%0.441SS*.Hα-helixtrans-62.3-43.5176.8-178.1177.7-86.9-173.80111.8P18 S19 V20 S26P18-K22 WeakPolarHBondContact O-CB 3.38Å; P18-K22 PolarHBondContact O-N 2.77Å; S19-K22 PolarHBondContact O-N 3.15Å; V20-K22 VanDerWaalsContact C-N 3.35Å; K22-S26 VanDerWaalsContact O-CB 3.27Å; K22-S26 WeakPolarHBondContact O-CB 3.18Å; K22-S26 PolarHBondContact O-N 2.85Å; K22-S26 PolarHBondContact O-OG 3.01Å
23T92.9Very high90.5Very high91 Ų9180.9 Ų80.956%0.55842%0.423SS*.Hα-helixtrans-69.3-33.4176.856.70000112.4S19 V20 R21 S26 G27S19-T23 WeakPolarHBondContact O-CG2 3.25Å; S19-T23 PolarHBondContact O-N 2.81Å; S19-T23 PolarHBondContact O-OG1 2.83Å; V20-T23 WeakPolarHBondContact CA-OG1 3.48Å; V20-T23 PolarHBondContact O-N 3.25Å; V20-T23 PolarHBondContact O-OG1 2.77Å; R21-T23 PolarHBondContact O-N 3.46Å; T23-S26 WeakPolarHBondContact CA-OG 3.45Å; T23-S26 PolarHBondContact O-OG 2.93Å; T23-G27 PolarHBondContact O-N 3.18Å; T23-G27 VanDerWaalsContact O-N 3.09Å
24H93.7Very high90.8Very high35 Ų3581.4 Ų81.416%0.16243%0.426CS..Hα-helixtrans-65-54.7173.4179.786.1000112C6 C9 V20 R21 S26 G27 H30C6-H24 VanDerWaalsContact CB-NE2 3.29Å; C6-H24 WeakPolarHBondContact CB-NE2 3.35Å; C6-H24 PolarHBondContact SG-NE2 2.86Å; C9-H24 PolarHBondContact SG-NE2 2.81Å; V20-H24 VanDerWaalsContact O-CB 3.29Å; V20-H24 WeakPolarHBondContact O-CB 3.48Å; V20-H24 PolarHBondContact O-N 3.25Å; R21-H24 PolarHBondContact O-N 3.11Å; H24-S26 VanDerWaalsContact C-N 3.3Å; H24-S26 PolarHBondContact O-N 3.21Å; H24-G27 PolarHBondContact O-N 2.99Å; H24-H30 AromaticContact CD2-ND1 3.75Å; H24-H30 AromaticContact NE2-ND1 3.51Å; H24-H30 VanDerWaalsContact O-CB 3.28Å; H24-H30 WeakPolarHBondContact O-CB 3.33Å
25C91.1Very high91.2Very high54 Ų5482.6 Ų82.637%0.36542%0.421SS..Hα-helixtrans-64.4-33.6-178.9-65.50000112.7R21 G27 H30R21-C25 WeakPolarHBondContact O-CB 3.35Å; R21-C25 PolarHBondContact O-N 3Å; R21-C25 PolarHBondContact O-SG 3.26Å; R21-C25 VanDerWaalsContact O-SG 3.33Å; C25-G27 VanDerWaalsContact C-N 3.26Å; C25-H30 PolarHBondContact O-CD2 3.16Å; C25-H30 VanDerWaalsContact O-CD2 3.25Å
26S93.5Very high91.6Very high63 Ų6380 Ų8044%0.44141%0.412SS..Hα-helixtrans-79.9-10.9175.861.20000113.4K22 T23 H24 K31K22-S26 VanDerWaalsContact O-CB 3.27Å; K22-S26 WeakPolarHBondContact O-CB 3.18Å; K22-S26 PolarHBondContact O-N 2.85Å; K22-S26 PolarHBondContact O-OG 3.01Å; T23-S26 WeakPolarHBondContact CA-OG 3.45Å; T23-S26 PolarHBondContact O-OG 2.93Å; H24-S26 VanDerWaalsContact C-N 3.3Å; H24-S26 PolarHBondContact O-N 3.21Å; S26-K31 VanDerWaalsContact O-CE 3.27Å; S26-K31 WeakPolarHBondContact O-CE 3.39Å; S26-K31 PolarHBondContact O-NZ 3.38Å
27G93.9Very high92Very high25 Ų2583.4 Ų83.426%0.25842%0.422SS..SBendtrans-64.3151.2179.500000112.9T23 H24 C25 H30 K31T23-G27 PolarHBondContact O-N 3.18Å; T23-G27 VanDerWaalsContact O-N 3.09Å; H24-G27 PolarHBondContact O-N 2.99Å; C25-G27 VanDerWaalsContact C-N 3.26Å; G27-H30 PolarHBondContact O-N 3.48Å; G27-K31 PolarHBondContact O-N 3.46Å; G27-K31 VanDerWaalsContact O-N 3.17Å
28R94.3Very high92.1Very high191 Ų19186.6 Ų86.672%0.72143%0.427SS*.Hα-helixtrans-60.5-48.9-176.9-160.6-171-49.9110.75.3112.2H30 K31 E32R28-H30 VanDerWaalsContact C-N 3.33Å; R28-H30 PolarHBondContact O-N 3.28Å; R28-K31 PolarHBondContact O-N 3.25Å; R28-K31 VanDerWaalsContact O-N 3.17Å; R28-E32 WeakPolarHBondContact CD-OE1 3.38Å; R28-E32 HydrophobicContact CG-CG 4.49Å; R28-E32 VanDerWaalsContact CG-OE1 3.3Å; R28-E32 WeakPolarHBondContact CG-OE1 3.2Å; R28-E32 WeakPolarHBondContact O-CG 3.36Å; R28-E32 PolarHBondContact O-N 3.32Å
29K93.9Very high92.2Very high122 Ų12288.1 Ų88.153%0.5343%0.426SS..Hα-helixtrans-55.6-45.2179.1-175.8-179.8178.1-174.50112.3E32 N33K29-E32 PolarHBondContact O-N 3.47Å; K29-N33 WeakPolarHBondContact O-CB 3.5Å; K29-N33 VanDerWaalsContact O-CG 3.27Å; K29-N33 PolarHBondContact O-N 3.39Å; K29-N33 PolarHBondContact O-OD1 3.18Å
30H95.7Very high92.2Very high24 Ų2490.3 Ų90.311%0.11143%0.426CS..Hα-helixtrans-64.4-46.8178.9-17890.4000111.4C6 Y8 H24 C25 G27 R28 E32 N33 V34C6-H30 PolarHBondContact SG-CE1 3.29Å; C6-H30 PolarHBondContact SG-ND1 3.16Å; Y8-H30 AromaticContact CD2-CE1 3.67Å; H24-H30 AromaticContact CD2-ND1 3.75Å; H24-H30 AromaticContact NE2-ND1 3.51Å; H24-H30 VanDerWaalsContact O-CB 3.28Å; H24-H30 WeakPolarHBondContact O-CB 3.33Å; C25-H30 PolarHBondContact O-CD2 3.16Å; C25-H30 VanDerWaalsContact O-CD2 3.25Å; G27-H30 PolarHBondContact O-N 3.48Å; R28-H30 VanDerWaalsContact C-N 3.33Å; R28-H30 PolarHBondContact O-N 3.28Å; H30-E32 VanDerWaalsContact C-N 3.34Å; H30-E32 PolarHBondContact O-N 2.85Å; H30-N33 PolarHBondContact O-N 3.37Å; H30-V34 WeakPolarHBondContact O-CB 3.13Å; H30-V34 WeakPolarHBondContact O-CG2 3.23Å; H30-V34 PolarHBondContact O-N 3.38Å
31K94.6Very high92Very high112 Ų11293.4 Ų93.449%0.48743%0.432SS..Hα-helixtrans-62.8-38.3178.7-72.3171.9173.6163.80113.2S26 G27 R28 K35S26-K31 VanDerWaalsContact O-CE 3.27Å; S26-K31 WeakPolarHBondContact O-CE 3.39Å; S26-K31 PolarHBondContact O-NZ 3.38Å; G27-K31 PolarHBondContact O-N 3.46Å; G27-K31 VanDerWaalsContact O-N 3.17Å; R28-K31 PolarHBondContact O-N 3.25Å; R28-K31 VanDerWaalsContact O-N 3.17Å; K31-K35 WeakPolarHBondContact O-CG 3.43Å; K31-K35 PolarHBondContact O-N 3.11Å
32E93.9Very high91.6Very high96 Ų9694.9 Ų94.945%0.44944%0.444SS..Hα-helixtrans-67.1-49.9176-74166.9176.200110.5R28 K29 H30 V34 K35 D36R28-E32 WeakPolarHBondContact CD-OE1 3.38Å; R28-E32 HydrophobicContact CG-CG 4.49Å; R28-E32 VanDerWaalsContact CG-OE1 3.3Å; R28-E32 WeakPolarHBondContact CG-OE1 3.2Å; R28-E32 WeakPolarHBondContact O-CG 3.36Å; R28-E32 PolarHBondContact O-N 3.32Å; K29-E32 PolarHBondContact O-N 3.47Å; H30-E32 VanDerWaalsContact C-N 3.34Å; H30-E32 PolarHBondContact O-N 2.85Å; E32-V34 VanDerWaalsContact C-N 3.28Å; E32-V34 PolarHBondContact O-N 3.39Å; E32-K35 WeakPolarHBondContact O-CB 3.23Å; E32-K35 PolarHBondContact O-N 3.02Å; E32-D36 PolarHBondContact O-N 3.47Å
33N93.8Very high90.9Very high47 Ų4792.8 Ų92.825%0.25144%0.437SS..Hα-helixtrans-60.8-36.7177.8-73.914000113.1Y8 K29 H30 K35 D36 Y37Y8-N33 VanDerWaalsContact O-CB 3.23Å; Y8-N33 WeakPolarHBondContact O-CB 3.16Å; Y8-N33 PolarHBondContact O-ND2 3.07Å; K29-N33 WeakPolarHBondContact O-CB 3.5Å; K29-N33 VanDerWaalsContact O-CG 3.27Å; K29-N33 PolarHBondContact O-N 3.39Å; K29-N33 PolarHBondContact O-OD1 3.18Å; H30-N33 PolarHBondContact O-N 3.37Å; N33-K35 VanDerWaalsContact C-N 3.35Å; N33-D36 PolarHBondContact O-N 2.89Å; N33-Y37 WeakPolarHBondContact O-CB 3.42Å; N33-Y37 PolarHBondContact O-N 3.09Å
34V93.8Very high90Very high33 Ų3395.1 Ų95.120%0.244%0.441CS..Hα-helixtrans-63.8-41.7174.7169.70000110.8Y8 H30 E32 Y38Y8-V34 HydrophobicContact CD1-CG2 3.95Å; Y8-V34 HydrophobicContact CD2-CG2 3.69Å; Y8-V34 HydrophobicContact CE1-CG2 4.39Å; Y8-V34 HydrophobicContact CE2-CG2 4.15Å; Y8-V34 HydrophobicContact CG-CG2 3.56Å; H30-V34 WeakPolarHBondContact O-CB 3.13Å; H30-V34 WeakPolarHBondContact O-CG2 3.23Å; H30-V34 PolarHBondContact O-N 3.38Å; E32-V34 VanDerWaalsContact C-N 3.28Å; E32-V34 PolarHBondContact O-N 3.39Å; V34-Y38 HydrophobicContact CG1-CD2 4.06Å; V34-Y38 HydrophobicContact CG1-CE2 3.88Å; V34-Y38 WeakPolarHBondContact O-CD2 3.38Å; V34-Y38 PolarHBondContact O-N 3.11Å
35K92.9Very high89Confident148 Ų14898.2 Ų98.264%0.64346%0.456SS*.Hα-helixtrans-65.2-48.4175.8-72.4174.1-179.8-174.30111.4K31 E32 N33 Y37 Y38 Q39K31-K35 WeakPolarHBondContact O-CG 3.43Å; K31-K35 PolarHBondContact O-N 3.11Å; E32-K35 WeakPolarHBondContact O-CB 3.23Å; E32-K35 PolarHBondContact O-N 3.02Å; N33-K35 VanDerWaalsContact C-N 3.35Å; K35-Y37 VanDerWaalsContact C-N 3.26Å; K35-Y37 PolarHBondContact O-N 2.97Å; K35-Y38 PolarHBondContact O-N 3.12Å; K35-Q39 WeakPolarHBondContact O-CB 3.23Å; K35-Q39 PolarHBondContact O-N 2.93Å
36D91.6Very high88.1Confident77 Ų7798 Ų9841%0.41246%0.458SS..Hα-helixtrans-61.4-37.2179.7-70.5-4.3000111.7E32 N33 Q39 K40E32-D36 PolarHBondContact O-N 3.47Å; N33-D36 PolarHBondContact O-N 2.89Å; D36-Q39 PolarHBondContact O-N 2.76Å; D36-K40 WeakPolarHBondContact O-CB 3.37Å; D36-K40 WeakPolarHBondContact O-CG 3.29Å; D36-K40 PolarHBondContact O-N 3.14Å
37Y91.3Very high87.2Confident128 Ų12899.4 Ų99.450%0.50246%0.457SS..Hα-helixtrans-59.1-51175.2176.1-94.9000111.4Y8 N33 K35 Q39 W41Y8-Y37 HydrophobicContact CD1-CD1 4.35Å; Y8-Y37 HydrophobicContact CD1-CG 4.18Å; Y8-Y37 AromaticContact CE1-CD1 3.96Å; Y8-Y37 HydrophobicContact CE1-CD1 3.96Å; Y8-Y37 HydrophobicContact CE1-CE1 4.26Å; Y8-Y37 HydrophobicContact CE1-CG 4.24Å; N33-Y37 WeakPolarHBondContact O-CB 3.42Å; N33-Y37 PolarHBondContact O-N 3.09Å; K35-Y37 VanDerWaalsContact C-N 3.26Å; K35-Y37 PolarHBondContact O-N 2.97Å; Y37-Q39 VanDerWaalsContact C-N 3.33Å; Y37-Q39 PolarHBondContact O-N 2.97Å; Y37-W41 WeakPolarHBondContact O-CB 3.18Å; Y37-W41 PolarHBondContact O-N 2.89Å
38Y90Very high86.3Confident114 Ų114100.6 Ų100.645%0.44746%0.462SS..Hα-helixtrans-70.1-30.9178.3-73.8-63.7000113V34 K35 W41 M42V34-Y38 HydrophobicContact CG1-CD2 4.06Å; V34-Y38 HydrophobicContact CG1-CE2 3.88Å; V34-Y38 WeakPolarHBondContact O-CD2 3.38Å; V34-Y38 PolarHBondContact O-N 3.11Å; K35-Y38 PolarHBondContact O-N 3.12Å; Y38-W41 HydrophobicContact CD1-CE3 4.49Å; Y38-W41 PolarHBondContact O-N 3.36Å; Y38-M42 WeakPolarHBondContact O-CG 3.15Å; Y38-M42 PolarHBondContact O-N 3.22Å; Y38-M42 VanDerWaalsContact O-N 3.11Å
39Q87.3Confident85.3Confident119 Ų11996.8 Ų96.856%0.55646%0.455SS*.Hα-helixtrans-66.8-49.4176.6-175.3138.528.900111.6K35 D36 Y37 W41 M42 E43K35-Q39 WeakPolarHBondContact O-CB 3.23Å; K35-Q39 PolarHBondContact O-N 2.93Å; D36-Q39 PolarHBondContact O-N 2.76Å; Y37-Q39 VanDerWaalsContact C-N 3.33Å; Y37-Q39 PolarHBondContact O-N 2.97Å; Q39-W41 VanDerWaalsContact C-N 3.27Å; Q39-W41 PolarHBondContact O-N 3.26Å; Q39-M42 PolarHBondContact O-N 3.23Å; Q39-M42 VanDerWaalsContact O-N 3.12Å; Q39-E43 PolarHBondContact O-N 2.92Å; Q39-E43 VanDerWaalsContact O-N 3.09Å
40K85.8Confident84.4Confident129 Ų12995 Ų9556%0.56145%0.451SS*.Hα-helixtrans-60.7-38.1174.5-71.7173-177.7173.10111.9D36 M42 E43 E44D36-K40 WeakPolarHBondContact O-CB 3.37Å; D36-K40 WeakPolarHBondContact O-CG 3.29Å; D36-K40 PolarHBondContact O-N 3.14Å; K40-M42 VanDerWaalsContact C-N 3.29Å; K40-M42 PolarHBondContact O-N 3.36Å; K40-E43 PolarHBondContact O-N 3.49Å; K40-E44 PolarHBondContact O-N 3.48Å
41W87.3Confident83.6Confident110 Ų11098.1 Ų98.142%0.41747%0.468SS..Hα-helixtrans-60.7-38.7175.9-177.866.4000112.5Y37 Y38 Q39 Q45Y37-W41 WeakPolarHBondContact O-CB 3.18Å; Y37-W41 PolarHBondContact O-N 2.89Å; Y38-W41 HydrophobicContact CD1-CE3 4.49Å; Y38-W41 PolarHBondContact O-N 3.36Å; Q39-W41 VanDerWaalsContact C-N 3.27Å; Q39-W41 PolarHBondContact O-N 3.26Å; W41-Q45 WeakPolarHBondContact O-CG 3.43Å; W41-Q45 PolarHBondContact O-N 3.32Å; W41-Q45 VanDerWaalsContact O-N 3.11Å
42M80.6Confident82.5Confident113 Ų11399.3 Ų99.356%0.55747%0.473SS*.Hα-helixtrans-69-38.1174.6-67.7-62-169.900112.5Y38 Q39 K40 Q45 A46Y38-M42 WeakPolarHBondContact O-CG 3.15Å; Y38-M42 PolarHBondContact O-N 3.22Å; Y38-M42 VanDerWaalsContact O-N 3.11Å; Q39-M42 PolarHBondContact O-N 3.23Å; Q39-M42 VanDerWaalsContact O-N 3.12Å; K40-M42 VanDerWaalsContact C-N 3.29Å; K40-M42 PolarHBondContact O-N 3.36Å; M42-Q45 PolarHBondContact O-N 3.14Å; M42-A46 WeakPolarHBondContact O-CB 3.44Å; M42-A46 PolarHBondContact O-N 2.9Å
43E78.3Confident81.3Confident118 Ų11898.6 Ų98.655%0.55148%0.476SS*.Hα-helixtrans-64.1-42.3175.2-70.4174.4-179.600111.8Q39 K40 Q45 A46 Q47Q39-E43 PolarHBondContact O-N 2.92Å; Q39-E43 VanDerWaalsContact O-N 3.09Å; K40-E43 PolarHBondContact O-N 3.49Å; E43-Q45 PolarHBondContact O-N 3.35Å; E43-A46 PolarHBondContact O-N 2.86Å; E43-Q47 WeakPolarHBondContact O-CB 3.37Å; E43-Q47 PolarHBondContact O-N 3.1Å
44E72.6Confident80.2Confident139 Ų13999.2 Ų99.265%0.6548%0.481SS*.Hα-helixtrans-64.3-39.1175.6-74.9-177168.300112.2K40 Q47 S48K40-E44 PolarHBondContact O-N 3.48Å; E44-Q47 PolarHBondContact O-N 3.14Å; E44-S48 PolarHBondContact O-N 3.37Å
45Q72.7Confident78.9Confident101 Ų10199.9 Ų99.947%0.47249%0.49SS..Hα-helixtrans-65.8-40.1174.4-72.8-134.29300112.2W41 M42 E43 S48 L49W41-Q45 WeakPolarHBondContact O-CG 3.43Å; W41-Q45 PolarHBondContact O-N 3.32Å; W41-Q45 VanDerWaalsContact O-N 3.11Å; M42-Q45 PolarHBondContact O-N 3.14Å; E43-Q45 PolarHBondContact O-N 3.35Å; Q45-S48 PolarHBondContact O-N 2.8Å; Q45-L49 PolarHBondContact O-N 3.26Å
46A71.9Confident77.4Confident48 Ų4894.8 Ų94.840%0.39748%0.476SS..Hα-helixtrans-63.7-43.8174.100000111.3M42 E43 S48 L49 I50M42-A46 WeakPolarHBondContact O-CB 3.44Å; M42-A46 PolarHBondContact O-N 2.9Å; E43-A46 PolarHBondContact O-N 2.86Å; A46-S48 PolarHBondContact O-N 3.15Å; A46-L49 WeakPolarHBondContact O-CB 3.5Å; A46-L49 PolarHBondContact O-N 3.29Å; A46-L49 VanDerWaalsContact O-N 3.16Å; A46-I50 WeakPolarHBondContact O-CG1 3.29Å; A46-I50 PolarHBondContact O-N 2.96Å
47Q75.6Confident75.9Confident93 Ų9396.9 Ų96.944%0.43548%0.481SS..Hα-helixtrans-63.4-41.4178.3-167.460.95200111.7E43 E44 L49 I50 D51E43-Q47 WeakPolarHBondContact O-CB 3.37Å; E43-Q47 PolarHBondContact O-N 3.1Å; E44-Q47 PolarHBondContact O-N 3.14Å; Q47-L49 PolarHBondContact O-N 3.47Å; Q47-I50 PolarHBondContact O-N 3.28Å; Q47-I50 VanDerWaalsContact O-N 3.11Å; Q47-D51 PolarHBondContact NE2-OD1 3.03Å; Q47-D51 WeakPolarHBondContact O-CB 3.28Å; Q47-D51 PolarHBondContact O-N 3.38Å
48S74.7Confident74.6Confident50 Ų5098.4 Ų98.435%0.3549%0.493SS..Hα-helixtrans-58.4-36.7174.7-173.30000112.8E44 Q45 A46 K52E44-S48 PolarHBondContact O-N 3.37Å; Q45-S48 PolarHBondContact O-N 2.8Å; A46-S48 PolarHBondContact O-N 3.15Å; S48-K52 WeakPolarHBondContact O-CD 3.43Å; S48-K52 VanDerWaalsContact O-CG 3.25Å; S48-K52 WeakPolarHBondContact O-CG 3.34Å; S48-K52 PolarHBondContact O-N 3.43Å; S48-K52 PolarHBondContact OG-NZ 3.4Å
49L72.6Confident73.1Confident111 Ų11199.5 Ų99.558%0.58150%0.502SS*.Hα-helixtrans-71.7-39176-71.8166.2000112.1Q45 A46 Q47 T53Q45-L49 PolarHBondContact O-N 3.26Å; A46-L49 WeakPolarHBondContact O-CB 3.5Å; A46-L49 PolarHBondContact O-N 3.29Å; A46-L49 VanDerWaalsContact O-N 3.16Å; Q47-L49 PolarHBondContact O-N 3.47Å; L49-T53 WeakPolarHBondContact O-CB 3.29Å; L49-T53 PolarHBondContact O-N 3.29Å; L49-T53 PolarHBondContact O-OG1 3.48Å
50I75.4Confident71.6Confident85 Ų8597 Ų9744%0.43651%0.508SS..Hα-helixtrans-64.8-44.5175.7-65.8166.6000110.3A46 Q47 K52 T53 T54A46-I50 WeakPolarHBondContact O-CG1 3.29Å; A46-I50 PolarHBondContact O-N 2.96Å; Q47-I50 PolarHBondContact O-N 3.28Å; Q47-I50 VanDerWaalsContact O-N 3.11Å; I50-K52 PolarHBondContact O-N 3.18Å; I50-T53 PolarHBondContact O-N 2.91Å; I50-T54 VanDerWaalsContact O-CB 3.24Å; I50-T54 WeakPolarHBondContact O-CB 3.49Å; I50-T54 PolarHBondContact O-N 2.58Å; I50-T54 PolarHBondContact O-OG1 3.48Å
51D78.3Confident70.1Confident90 Ų9099.4 Ų99.448%0.48152%0.519SS..Hα-helixtrans-63.5-42.4-179.6-65.9-16.7000111Q47 A55Q47-D51 PolarHBondContact NE2-OD1 3.03Å; Q47-D51 WeakPolarHBondContact O-CB 3.28Å; Q47-D51 PolarHBondContact O-N 3.38Å; D51-A55 WeakPolarHBondContact O-CB 3.3Å; D51-A55 PolarHBondContact O-N 2.87Å
52K72.2Confident68.4Low136 Ų13698.1 Ų98.159%0.59152%0.518SS*.Hα-helixtrans-63.5-42.7174.7-73.7166.8-176.9157.40112.2S48 I50 A56S48-K52 WeakPolarHBondContact O-CD 3.43Å; S48-K52 VanDerWaalsContact O-CG 3.25Å; S48-K52 WeakPolarHBondContact O-CG 3.34Å; S48-K52 PolarHBondContact O-N 3.43Å; S48-K52 PolarHBondContact OG-NZ 3.4Å; I50-K52 PolarHBondContact O-N 3.18Å; K52-A56 WeakPolarHBondContact O-CB 3.14Å; K52-A56 PolarHBondContact O-N 2.95Å
53T67.9Low67.1Low82 Ų8297.4 Ų97.450%0.50352%0.522SS..Hα-helixtrans-69.3-41.7179.7-57.70000111.3L49 I50 A56 F57L49-T53 WeakPolarHBondContact O-CB 3.29Å; L49-T53 PolarHBondContact O-N 3.29Å; L49-T53 PolarHBondContact O-OG1 3.48Å; I50-T53 PolarHBondContact O-N 2.91Å; T53-A56 PolarHBondContact O-N 3.47Å; T53-F57 WeakPolarHBondContact O-CB 3.39Å; T53-F57 PolarHBondContact O-N 3.25Å
54T70.5Confident65.9Low60 Ų6097.6 Ų97.637%0.36853%0.534SS..Hα-helixtrans-69.2-40.4178.9-56.10000111.2I50 A56 F57 Q58I50-T54 VanDerWaalsContact O-CB 3.24Å; I50-T54 WeakPolarHBondContact O-CB 3.49Å; I50-T54 PolarHBondContact O-N 2.58Å; I50-T54 PolarHBondContact O-OG1 3.48Å; T54-A56 VanDerWaalsContact C-N 3.35Å; T54-F57 PolarHBondContact O-N 3.33Å; T54-Q58 WeakPolarHBondContact O-CB 3.5Å; T54-Q58 PolarHBondContact O-N 2.89Å
55A67.4Low65.1Low46 Ų4694.2 Ų94.238%0.3852%0.523SS..Hα-helixtrans-63-40.7172.500000111.6D51 Q58 Q59D51-A55 WeakPolarHBondContact O-CB 3.3Å; D51-A55 PolarHBondContact O-N 2.87Å; A55-Q58 PolarHBondContact O-N 3.4Å; A55-Q59 WeakPolarHBondContact O-CB 3.39Å; A55-Q59 WeakPolarHBondContact O-CG 3.41Å; A55-Q59 PolarHBondContact O-N 3.17Å
56A61.2Low64.5Low42 Ų4295.2 Ų95.235%0.34754%0.538SS..Hα-helixtrans-66.3-35.6174.500000112.8K52 T53 T54K52-A56 WeakPolarHBondContact O-CB 3.14Å; K52-A56 PolarHBondContact O-N 2.95Å; T53-A56 PolarHBondContact O-N 3.47Å; T54-A56 VanDerWaalsContact C-N 3.35Å
57F60.3Low63.8Low120 Ų120100.2 Ų100.253%0.52655%0.551SS.*Hα-helixtrans-69.9-42.9175.6-131-81.2000112T53 T54 Q59 G60 M62T53-F57 WeakPolarHBondContact O-CB 3.39Å; T53-F57 PolarHBondContact O-N 3.25Å; T54-F57 PolarHBondContact O-N 3.33Å; F57-Q59 VanDerWaalsContact C-N 3.29Å; F57-Q59 PolarHBondContact O-N 3.03Å; F57-G60 PolarHBondContact O-N 2.91Å; F57-G60 VanDerWaalsContact O-N 3.16Å; F57-M62 HydrophobicContact CB-SD 4.2Å; F57-M62 HydrophobicContact CD1-CG 4.46Å; F57-M62 HydrophobicContact CD2-CE 3.42Å; F57-M62 VanDerWaalsContact CD2-CE 3.42Å; F57-M62 HydrophobicContact CD2-CG 3.85Å; F57-M62 HydrophobicContact CD2-SD 3.29Å; F57-M62 WeakPolarHBondContact CD2-SD 3.46Å; F57-M62 HydrophobicContact CE2-CE 3.37Å; F57-M62 HydrophobicContact CE2-CG 3.96Å; F57-M62 HydrophobicContact CE2-SD 3.78Å; F57-M62 HydrophobicContact CG-CG 4.11Å; F57-M62 HydrophobicContact CG-SD 3.86Å; F57-M62 HydrophobicContact CZ-CE 4.41Å; F57-M62 HydrophobicContact CZ-CG 4.32Å
58Q63Low62.4Low161 Ų161102.4 Ų102.475%0.75257%0.573SS**Hα-helixtrans-68.6-26.4175.9-83.5174.344.800113T54 A55 G60T54-Q58 WeakPolarHBondContact O-CB 3.5Å; T54-Q58 PolarHBondContact O-N 2.89Å; A55-Q58 PolarHBondContact O-N 3.4Å; Q58-G60 PolarHBondContact O-N 3.34Å
59Q59.1Low61.7Low136 Ų136103.6 Ų103.664%0.63659%0.594SS**THydrogen-bonded Turntrans-74.11.8172.7-74.8174.67.800113.7A55 F57 K61A55-Q59 WeakPolarHBondContact O-CB 3.39Å; A55-Q59 WeakPolarHBondContact O-CG 3.41Å; A55-Q59 PolarHBondContact O-N 3.17Å; F57-Q59 VanDerWaalsContact C-N 3.29Å; F57-Q59 PolarHBondContact O-N 3.03Å; Q59-K61 VanDerWaalsContact C-N 3.3Å; Q59-K61 PolarHBondContact O-N 3.17Å
60G56.3Low60.9Low66 Ų66101.2 Ų101.268%0.6859%0.59SS**THydrogen-bonded Turntrans68.720.4166.100000115.5F57 Q58F57-G60 PolarHBondContact O-N 2.91Å; F57-G60 VanDerWaalsContact O-N 3.16Å; Q58-G60 PolarHBondContact O-N 3.34Å
61K54.7Low59.9Low181 Ų181102.6 Ų102.679%0.78760%0.604SS**  trans-99.910.9-175.8-72-178-179.1175.70115.1Q59Q59-K61 VanDerWaalsContact C-N 3.3Å; Q59-K61 PolarHBondContact O-N 3.17Å
62M50.3Low58.8Low82 Ų82103.5 Ų103.540%0.40462%0.615SS.*SBendtrans-125.3124.1175.646.1-148.5-62.600110.7F57F57-M62 HydrophobicContact CB-SD 4.2Å; F57-M62 HydrophobicContact CD1-CG 4.46Å; F57-M62 HydrophobicContact CD2-CE 3.42Å; F57-M62 VanDerWaalsContact CD2-CE 3.42Å; F57-M62 HydrophobicContact CD2-CG 3.85Å; F57-M62 HydrophobicContact CD2-SD 3.29Å; F57-M62 WeakPolarHBondContact CD2-SD 3.46Å; F57-M62 HydrophobicContact CE2-CE 3.37Å; F57-M62 HydrophobicContact CE2-CG 3.96Å; F57-M62 HydrophobicContact CE2-SD 3.78Å; F57-M62 HydrophobicContact CG-CG 4.11Å; F57-M62 HydrophobicContact CG-SD 3.86Å; F57-M62 HydrophobicContact CZ-CE 4.41Å; F57-M62 HydrophobicContact CZ-CG 4.32Å
63P53.1Low58Low98 Ų98103.9 Ų103.964%0.63663%0.632SS**  trans-62.6145.4177.826.2-32.4000109.7T65P63-T65 PolarHBondContact O-N 3.4Å
64P54.3Low57.5Low123 Ų123104 Ų10480%0.79965%0.648SS**SBendtrans-69.315.9-173.328-34.6000114.8
65T56Low56.8Low67 Ų67104.6 Ų104.641%0.41167%0.667SS.*  trans-147.1113.4-175.729.40000109.8P63 F67P63-T65 PolarHBondContact O-N 3.4Å; T65-F67 PolarHBondContact O-N 3.49Å
66P59.8Low56Low122 Ų122106.7 Ų106.779%0.79268%0.684SS**SBendtrans-67.6-9.6170.3-15.829.4000112.9
67F57.7Low55.8Low154 Ų154113.6 Ų113.668%0.67571%0.711SS**SBendtrans-128.8116.7-176.2-72.4-84.4000110.8T65 G69T65-F67 PolarHBondContact O-N 3.49Å; F67-G69 PolarHBondContact O-N 3.15Å
68P46.1Very low55.6Low138 Ų138115.1 Ų115.190%0.89672%0.724SS**THydrogen-bonded Turntrans-67.1104.6168.1-8.123.2000108.3
69G59.1Low55.3Low76 Ų76112.3 Ų112.378%0.78472%0.719SS**THydrogen-bonded Turntrans1321.4175.600000116.9F67F67-G69 PolarHBondContact O-N 3.15Å
70A57.3Low55.2Low60 Ų60111.3 Ų111.350%0.49672%0.724SS.*PPolyproline II helixtrans-73.4131.2175.500000111.4
71P53.3Low55Low114 Ų114114 Ų11474%0.7473%0.73SS**PPolyproline II helixtrans-64.9154.5176.3-12.426.1000111.1
72P56Low55Low110 Ų110111.8 Ų111.871%0.71473%0.727SS**PPolyproline II helixtrans-58.2146-176.722.4-32.1000112.1G74P72-G74 VanDerWaalsContact C-N 3.27Å; P72-G74 PolarHBondContact O-N 2.93Å
73P55.2Low55.4Low144 Ų144115.7 Ų115.794%0.93575%0.748SS**THydrogen-bonded Turntrans-73.284.5179.530.5-32.2000109.3
74G57.2Low55.6Low83 Ų83117.5 Ų117.586%0.85675%0.753SS**THydrogen-bonded Turntrans-172.44.4177.500000115.1P72P72-G74 VanDerWaalsContact C-N 3.27Å; P72-G74 PolarHBondContact O-N 2.93Å
75G54.8Low55.5Low74 Ų74114.8 Ų114.876%0.76375%0.747SS**  trans-127.86.8-168.200000117.3
76A52.1Low55.7Low89 Ų89117.3 Ų117.374%0.73676%0.764SS**  trans-104.181179.200000110.7I78A76-I78 PolarHBondContact O-N 2.92Å
77M55.8Low55.3Low187 Ų187117.1 Ų117.192%0.92176%0.763SS**  trans-57102.9154.6-76.1-96.9-140.200106.9P79M77-P79 WeakPolarHBondContact O-CD 3.41Å
78I57.7Low55.3Low153 Ų153121.3 Ų121.379%0.78578%0.775SS**  trans-70.3113.1169.8-59-169.8000106.3A76A76-I78 PolarHBondContact O-N 2.92Å
79P55.5Low55.3Low102 Ų102121.1 Ų121.166%0.66277%0.773SS**  trans-66142.9174.627.5-31.8000109.2M77M77-P79 WeakPolarHBondContact O-CD 3.41Å
80P56.9Low55Low114 Ų114120.8 Ų120.874%0.7477%0.77SS**  trans-58.8145.7-178.322.7-31.9000110.9N82P80-N82 PolarHBondContact O-N 3.02Å
81P52.8Low54.9Low122 Ų122127.1 Ų127.179%0.79279%0.792SS**  trans-62.9107.2179.4-15.528.4000109.5L83P81-L83 PolarHBondContact O-N 2.87Å; P81-L83 VanDerWaalsContact O-N 3.14Å
82N54.3Low54.8Low135 Ų135129.1 Ų129.172%0.72280%0.795SS**  trans-64.2111.8169.7-173.3-5.1000108P80 N84P80-N82 PolarHBondContact O-N 3.02Å; N82-N84 PolarHBondContact O-N 3Å; N82-N84 VanDerWaalsContact O-N 3.1Å; N82-N84 PolarHBondContact OD1-N 3.29Å
83L59.5Low54.6Low164 Ų164129.5 Ų129.586%0.85980%0.798SS**SBendtrans-70.45.7-178.5-85161.7000114.1P81P81-L83 PolarHBondContact O-N 2.87Å; P81-L83 VanDerWaalsContact O-N 3.14Å
84N56Low54.6Low137 Ų137129 Ų12973%0.73379%0.792SS**  trans-123.681.5179.1-7534.1000111N82N82-N84 PolarHBondContact O-N 3Å; N82-N84 VanDerWaalsContact O-N 3.1Å; N82-N84 PolarHBondContact OD1-N 3.29Å
85G53Low54.1Low66 Ų66130.8 Ų130.868%0.6879%0.789SS**PPolyproline II helixtrans-94.6144.4167.100000112.1
86P60.4Low54Low119 Ų119136.7 Ų136.777%0.77380%0.796SS**PPolyproline II helixtrans-67.6158.1-176.726.4-32.7000113.4R88P86-R88 PolarHBondContact O-N 2.98Å
87P51.6Low54Low118 Ų118141.3 Ų141.377%0.76681%0.805SS**PPolyproline II helixtrans-65.5130.6-169.227-33.5000111P89P87-P89 WeakPolarHBondContact O-CD 3.27Å
88R56Low53.9Low242 Ų242136.2 Ų136.291%0.91380%0.801SS**  trans-61.7115.6176.5-72.8174.2163.7-103.1-0.7110.2P86P86-R88 PolarHBondContact O-N 2.98Å
89P47.6Very low53.8Low134 Ų134132 Ų13287%0.8780%0.795SS**  trans-79.6120.2169.1-7.627.1000108.4P87P87-P89 WeakPolarHBondContact O-CD 3.27Å
90G51Low53.6Low69 Ų69133.1 Ų133.171%0.71180%0.802SS**  trans147.227.6172.400000118.1L92G90-L92 PolarHBondContact O-N 3.29Å
91M55.2Low53.3Low194 Ų194133.4 Ų133.496%0.95680%0.804SS**  trans-65.799.2160.2-82.5176.580.200108.5
92L52.2Low53.6Low155 Ų155136.6 Ų136.681%0.81281%0.81SS**PPolyproline II helixtrans-70.8131.6162-120.773.1000108.1G90 T94G90-L92 PolarHBondContact O-N 3.29Å; L92-T94 PolarHBondContact O-N 3.49Å
93P51.4Low53.8Low118 Ų118138.3 Ų138.377%0.76682%0.816SS**PPolyproline II helixtrans-70.1119.6176.727-31000109.6P95P93-P95 WeakPolarHBondContact O-CD 3.27Å
94T54.6Low53.5Low133 Ų133136.1 Ų136.182%0.81681%0.812SS**PPolyproline II helixtrans-59.1126.3166.7360000109.8L92 Q96L92-T94 PolarHBondContact O-N 3.49Å; T94-Q96 PolarHBondContact O-N 3.4Å
95P46.7Very low53.4Low121 Ų121138.7 Ų138.779%0.78682%0.822SS**PPolyproline II helixtrans-64.2124.1172.4-20.532.1000110.8P93 M97P93-P95 WeakPolarHBondContact O-CD 3.27Å; P95-M97 PolarHBondContact O-N 2.94Å
96Q54.6Low53.3Low198 Ų198144.5 Ų144.593%0.92583%0.834SS**  trans-59.992.2169.6-176.2175.1-71.400109.8T94T94-Q96 PolarHBondContact O-N 3.4Å
97M51.4Low52.3Low187 Ų187142.2 Ų142.292%0.92183%0.831SS**  trans-80.3115.3166.1-106.8-160-176.800108.7P95 G99P95-M97 PolarHBondContact O-N 2.94Å; M97-G99 PolarHBondContact O-N 3.33Å
98G54Low52Low80 Ų80140.3 Ų140.383%0.82583%0.833SS**PPolyproline II helixtrans-61121.5179.200000112.7
99G54.1Low51.8Low64 Ų64138.3 Ų138.366%0.6684%0.836SS**PPolyproline II helixtrans-102.1148.8160.800000110.6M97M97-G99 PolarHBondContact O-N 3.33Å
100P52.8Low52Low126 Ų126135.2 Ų135.282%0.81883%0.829SS**PPolyproline II helixtrans-69.6161.2-175.629.2-33.6000113
101P50.7Low52.5Low119 Ų119137.9 Ų137.977%0.77383%0.834SS**PPolyproline II helixtrans-72137.2-157.128.1-34.6000114.1M103P101-M103 PolarHBondContact O-N 2.67Å
102M59.3Low52.5Low190 Ų190133.7 Ų133.794%0.93682%0.821SS**PPolyproline II helixtrans-66.3117.4169.4-164.5176.7-168.100109.5
103M57.1Low52.8Low170 Ų170132.5 Ų132.584%0.83782%0.822SS**PPolyproline II helixtrans-78.8133.8172.4-74.5-92.2-176.600110.3P101 M105P101-M103 PolarHBondContact O-N 2.67Å; M103-M105 PolarHBondContact O-N 3.35Å
104P54.4Low52.7Low119 Ų119133 Ų13377%0.77383%0.826SS**  trans-81.4109.4172.830.3-28.9000109.9M106P104-M106 VanDerWaalsContact C-N 3.27Å; P104-M106 PolarHBondContact O-N 3.02Å
105M52.7Low52.4Low191 Ų191130.3 Ų130.394%0.94183%0.825SS**  trans-79.881.1169.4-168.9-176.7165.600109.4M103M103-M105 PolarHBondContact O-N 3.35Å
106M51.5Low52.5Low188 Ų188134 Ų13493%0.92683%0.834SS**  trans-95.2122.6165.5-173.7178.7-178.800109.2P104P104-M106 VanDerWaalsContact C-N 3.27Å; P104-M106 PolarHBondContact O-N 3.02Å
107G40.5Very low52.4Low70 Ų70134 Ų13472%0.72284%0.836SS**  trans113.8126.8154.800000116.2
108G44.7Very low51.9Low78 Ų78128.5 Ų128.580%0.80483%0.827SS**  trans146.583.2158.800000114.8G110G108-G110 PolarHBondContact O-N 3.37Å
109M52.3Low51.6Low200 Ų200128.3 Ų128.399%0.98583%0.825SS**  trans-54.9118.5158.5-74.513773.900109.9
110G50.3Low51.1Low69 Ų69131.4 Ų131.471%0.71183%0.833SS**  trans-109.3128.2169.100000110.8G108G108-G110 PolarHBondContact O-N 3.37Å
111P61.8Low51Low126 Ų126129 Ų12982%0.81883%0.831SS**PPolyproline II helixtrans-74.8163.9-178.429.1-32.3000113.8
112P56.1Low51.1Low106 Ų106132.1 Ų132.169%0.68884%0.838SS**PPolyproline II helixtrans-79.9162.2-158.434.3-36.1000113.4P114P112-P114 WeakPolarHBondContact O-CD 3.44Å
113P56.9Low50.8Low129 Ų129134.4 Ų134.484%0.83884%0.836SS**PPolyproline II helixtrans-76.7120.9-179.529.4-31.6000111.9
114P51.1Low50.7Low130 Ų130131.9 Ų131.984%0.84483%0.832SS**PPolyproline II helixtrans-95.3125.6171.6-4.927.4000111.1P112P112-P114 WeakPolarHBondContact O-CD 3.44Å
115G47Very low50.8Low76 Ų76132.5 Ų132.578%0.78484%0.836SS**  trans94.297.7144.700000118.1
116M50Low50.8Low199 Ų199132.6 Ų132.698%0.9884%0.837SS**  trans-142.7103.1133.2-126.9170.8131.300109.7
117M52.1Low50.4Low197 Ų197127.3 Ų127.397%0.9783%0.831SS**  trans-79.8134.6171.7167.4175.4165.200109.2
118G39.8Very low50.4Low71 Ų71127.4 Ų127.473%0.73283%0.832SS**  trans165.196.6167.900000114
119G49.5Very low50.6Low76 Ų76134.2 Ų134.278%0.78483%0.833SS**  trans-67.1161.4163.700000111.5
120P42.5Very low50.3Low129 Ų129133.4 Ų133.484%0.83883%0.829SS**  -143.5160.583.227.4-6.1000114
121G51.3Low50.4Low75 Ų75137.4 Ų137.477%0.77383%0.829SS**  trans-58145.2-168.500000116.3
122M51.6Low49.8Very low186 Ų186139.8 Ų139.892%0.91683%0.832SS**  trans-144.398.4154.4-91.8151.6-172.500106.8
123R52.9Low49.5Very low237 Ų237143.3 Ų143.389%0.89484%0.841SS**PPolyproline II helixtrans-64.1128.6167.6-67160.169.9-138.35.7107.4
124P54.8Low49.2Very low117 Ų117142.3 Ų142.376%0.7684%0.835SS**PPolyproline II helixtrans-66.7141.4165.924.9-29.6000109.6M126P124-M126 PolarHBondContact O-N 3.09Å
125P58.3Low48.9Very low132 Ų132139.1 Ų139.186%0.85783%0.826SS**PPolyproline II helixtrans-67.4124.5-173.425.5-32.7000111.6
126M52.2Low48.7Very low193 Ų193143.6 Ų143.695%0.95183%0.825SS**PPolyproline II helixtrans-82.2128160.4-163.8-147.2-166.300108.1P124P124-M126 PolarHBondContact O-N 3.09Å
127G43.2Very low48.7Very low78 Ų78141.5 Ų141.580%0.80481%0.813SS**  trans133114.9159.100000114
128G40.4Very low48.8Very low71 Ų71140.3 Ų140.373%0.73281%0.807SS**  trans147.645.516400000116.2M130G128-M130 PolarHBondContact O-N 2.9Å
129R48.6Very low49.3Very low221 Ų221145 Ų14583%0.83481%0.812SS**  trans-64.7109.7151.768.8-167.2-178.1-88.5-5.3106
130M46.3Very low49.6Very low184 Ų184151.7 Ų151.791%0.90681%0.814SS**  trans-123.4113.6166.8-137.275.7172.300107.6G128G128-M130 PolarHBondContact O-N 2.9Å
131Q51.8Low50.4Low153 Ų153150.7 Ų150.772%0.71581%0.807SS**  trans-74.2148.3176-81.5139.930.600111
132M49.9Very low50.6Low175 Ų175152.7 Ų152.786%0.86281%0.807SS**  trans60.8121145-68.5175.1163.500119.6
133M48.9Very low50.5Low180 Ų180147.3 Ų147.389%0.88780%0.799SS**  -164.115296-94.3-144.2108.100112.9
134P50.4Low50.6Low109 Ų109144.3 Ų144.371%0.70880%0.795SS**  trans-93.8139.9179.535.7-27000112.2
135G46.2Very low50.4Low63 Ų63143.8 Ų143.865%0.64979%0.791SS**  trans82.5109.7146.800000117.5
136H43.1Very low50.2Low169 Ų169146 Ų14678%0.78279%0.792SS**  trans-175.3163.913129.6-131000110.5
137H49.4Very low50.4Low155 Ų155144.7 Ų144.772%0.71879%0.786SS**  trans75.275.1169.663.2-90.7000118.7M139H137-M139 PolarHBondContact O-N 2.98Å
138M53.2Low50.9Low172 Ų172150 Ų15085%0.84779%0.792SS**  trans-47.9121138.4-67.1-171.9-171.400109.8
139M51.9Low51.6Low169 Ų169157 Ų15783%0.83380%0.796SS**  trans-127.186.7157.7-79.9-68.4153.400107.9H137H137-M139 PolarHBondContact O-N 2.98Å
140R54.9Low51.6Low217 Ų217151.6 Ų151.682%0.81979%0.79SS**PPolyproline II helixtrans-75.8121.6165.1179.8155.464.7-142.85107.2
141P59.2Low51.8Low108 Ų108151.6 Ų151.670%0.70179%0.79SS**PPolyproline II helixtrans-65.5141.1170.7-15.528.8000109.6G143P141-G143 PolarHBondContact O-N 3.19Å
142P56.1Low52Low118 Ų118151.7 Ų151.777%0.76679%0.792SS**PPolyproline II helixtrans-64.3129.6174.224.6-30.2000109.9H144P142-H144 PolarHBondContact O-N 3.3Å
143G49.7Very low52.2Low73 Ų73147.8 Ų147.875%0.75379%0.788SS**PPolyproline II helixtrans-59118.6173.900000110.6P141P141-G143 PolarHBondContact O-N 3.19Å
144H53.3Low52.7Low173 Ų173150.4 Ų150.480%0.80179%0.788SS**PPolyproline II helixtrans-85.2121.5161.1-87.6-38.3000108.7P142 M146P142-H144 PolarHBondContact O-N 3.3Å; H144-M146 PolarHBondContact O-N 3.32Å; H144-M146 VanDerWaalsContact O-N 3.15Å
145P52.3Low53.3Low106 Ų106151.3 Ų151.369%0.68879%0.793SS**  trans-68.7111.616327.7-29000107.5M147P145-M147 VanDerWaalsContact C-N 3.32Å; P145-M147 PolarHBondContact O-N 3.28Å
146M53.8Low53.6Low178 Ų178156.2 Ų156.288%0.87781%0.805SS**  trans-62.896.4166.9-70.4-69.6-155.100107.9H144 M148H144-M146 PolarHBondContact O-N 3.32Å; H144-M146 VanDerWaalsContact O-N 3.15Å; M146-M148 PolarHBondContact O-N 2.94Å; M146-M148 VanDerWaalsContact O-N 3.16Å
147M55.6Low53.9Low167 Ų167163 Ų16382%0.82382%0.824SS**  trans-63.9114.5166.1-69.3-169.3177.900107.8P145 R149P145-M147 VanDerWaalsContact C-N 3.32Å; P145-M147 PolarHBondContact O-N 3.28Å; M147-R149 PolarHBondContact O-N 3.35Å
148M53Low54.1Low188 Ų188163.5 Ų163.593%0.92683%0.829SS**  trans-51.2111.1168.4-73.1162.1159.600108.7M146 P150M146-M148 PolarHBondContact O-N 2.94Å; M146-M148 VanDerWaalsContact O-N 3.16Å; M148-P150 WeakPolarHBondContact O-CD 3.14Å
149R55.6Low54.1Low218 Ų218163 Ų16382%0.82383%0.828SS**  trans-71124.8169.9-70.9173.274.2-125.45.1107.7M147 M151M147-R149 PolarHBondContact O-N 3.35Å; R149-M151 PolarHBondContact O-N 3.39Å
150P49.6Very low54.3Low109 Ų109162.7 Ų162.771%0.70883%0.828SS**  trans-64.8131.6172.6-17.430.7000110.1M148 M152M148-P150 WeakPolarHBondContact O-CD 3.14Å; P150-M152 PolarHBondContact O-N 3.4Å
151M49.5Very low54.2Low183 Ų183159.5 Ų159.590%0.90183%0.828SS**  trans-52106.2171.5-173.978.8174.200110R149 A153R149-M151 PolarHBondContact O-N 3.39Å; M151-A153 PolarHBondContact O-N 3Å; M151-A153 VanDerWaalsContact O-N 3.17Å
152M55.5Low53.9Low156 Ų156162.7 Ų162.777%0.76884%0.836SS**  trans-74.6105.9169.1-75.1158.1-16100107.9P150 R154P150-M152 PolarHBondContact O-N 3.4Å; M152-R154 PolarHBondContact O-N 3.27Å
153A54.5Low53.8Low92 Ų92165.7 Ų165.776%0.7684%0.841SS**PPolyproline II helixtrans-49.7123.7168.300000109.5M151M151-A153 PolarHBondContact O-N 3Å; M151-A153 VanDerWaalsContact O-N 3.17Å
154R60.2Low54.1Low235 Ų235172.3 Ų172.389%0.88785%0.847SS**PPolyproline II helixtrans-76.4133.6172.7-58.2-178.674.5-1791.9107.9M152M152-R154 PolarHBondContact O-N 3.27Å
155P61.7Low54.1Low128 Ų128172.2 Ų172.283%0.83185%0.851SS**PPolyproline II helixtrans-78.7140.317031.3-29.2000110.1
156D53.8Low54.3Low167 Ų167177.8 Ų177.889%0.89387%0.865SS**PPolyproline II helixtrans-55.2129175-160.4-100.3000112.2
157R48.5Very low54.3Low312 Ų312177.7 Ų177.7100%1.17786%0.863SS**  trans-163.80151.1-150.9178.3-172.9-173.72.3112

Retrieved 157 of 157 residues in 20.4 ms (Link to these results)