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DNA-directed RNA polymerase II subunit RPB4

Core component of RNA polymerase II (Pol II), a DNA-dependent RNA polymerase which synthesizes mRNA precursors and many functional non-coding RNAs using the four ribonucleoside triphosphates as substrates. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. POLR2D/RPB4 is part of a subcomplex with POLR2G/RPB7 that binds to a pocket formed by POLR2A/RPB1, POLR2B/RPB2 and POLR2F/RPABC2 at the base of the clamp element. The POLR2D/RPB4-POLR2G/RPB7 subcomplex seems to lock the clamp via POLR2G/RPB7 in the closed conformation thus preventing double-stranded DNA to enter the active site cleft. The POLR2D/RPB4-POLR2G/RPB7 subcomplex binds single-stranded DNA and RNA.

AlphaFold DB , UniProt , Accession A0A060XHC7, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene polr2d, Length 143 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M42.2Very low42.8Very low248 Ų248119.1 Ų119.1100%1.22282%0.821SS**  0109.30-75.5171.9119.700106.9
2A42.9Very low43.6Very low104 Ų104113.8 Ų113.886%0.8680%0.801SS**  trans-80.5124.2175.800000108.4
3S43.3Very low45.1Very low120 Ų120117.2 Ų117.284%0.83980%0.804SS**  trans-105.786.1166.357.50000108.4
4S44.6Very low46.6Very low118 Ų118115.6 Ų115.683%0.82578%0.781SS**  trans-64.3127.115247.90000108.6
5G35.7Very low49.2Very low79 Ų79119.5 Ų119.581%0.81478%0.783SS**  trans-160.380.417900000112.7
6G33.8Very low51.9Low68 Ų68120.4 Ų120.470%0.70177%0.773SS**  trans76.876.6151.400000117.3T8G6-T8 VanDerWaalsContact C-N 3.27Å; G6-T8 PolarHBondContact O-N 3.42Å
7S41Very low54.4Low113 Ų113115.9 Ų115.979%0.7974%0.742SS**  trans-64.798.4145.1172.60000106.4T9S7-T9 VanDerWaalsContact C-N 3.28Å; S7-T9 PolarHBondContact O-N 3.49Å
8T43.8Very low56.6Low130 Ų130111.7 Ų111.780%0.79872%0.719SS**  trans-63.9100.4158.6410000105.8G6 A10G6-T8 VanDerWaalsContact C-N 3.27Å; G6-T8 PolarHBondContact O-N 3.42Å; T8-A10 PolarHBondContact O-N 2.81Å
9T39.6Very low58.5Low119 Ų119108.4 Ų108.473%0.7370%0.699SS**  trans-48.6103165.438.10000108.3S7 V11S7-T9 VanDerWaalsContact C-N 3.28Å; S7-T9 PolarHBondContact O-N 3.49Å; T9-V11 PolarHBondContact O-N 3.08Å
10A51.2Low60.2Low78 Ų78109.4 Ų109.465%0.64569%0.694SS**  trans-60121.4172.500000107.2T8 G12T8-A10 PolarHBondContact O-N 2.81Å; A10-G12 VanDerWaalsContact C-N 3.32Å; A10-G12 PolarHBondContact O-N 2.6Å
11V52.3Low61.8Low133 Ų133106.1 Ų106.181%0.80667%0.671SS**  trans-67.793.6-178.5175.30000107.1T9T9-V11 PolarHBondContact O-N 3.08Å
12G52.8Low64.2Low56 Ų5697.8 Ų97.858%0.57763%0.631SS**  trans40.695.6169.300000114.9A10 I14A10-G12 VanDerWaalsContact C-N 3.32Å; A10-G12 PolarHBondContact O-N 2.6Å; G12-I14 VanDerWaalsContact C-N 3.32Å; G12-I14 PolarHBondContact O-N 2.85Å
13D62.9Low66.6Low157 Ų15795.7 Ų95.784%0.8460%0.603SS**  trans-50.997.4168.3-71.8-34.1000109.1E15D13-E15 PolarHBondContact O-N 3.26Å
14I65.9Low68.9Low96 Ų9691 Ų9149%0.49257%0.569SS.*  trans-67.8125.3164.3-57.8171.3000103.9G12 E16G12-I14 VanDerWaalsContact C-N 3.32Å; G12-I14 PolarHBondContact O-N 2.85Å; I14-E16 PolarHBondContact O-N 3.38Å
15E85.9Confident71Confident174 Ų17492.3 Ų92.381%0.81356%0.56SS**  trans-61.9106.5173.7-170.1173.4-176.900108.1D13D13-E15 PolarHBondContact O-N 3.26Å
16E92Very high73.7Confident133 Ų13396 Ų9662%0.62156%0.556SS**  trans-70.4131.4-177.9-58.6177.5-150.800110I14 P24I14-E16 PolarHBondContact O-N 3.38Å; E16-P24 HydrophobicContact CG-CG 3.73Å; E16-P24 WeakPolarHBondContact OE1-CG 3.44Å; E16-P24 WeakPolarHBondContact OE2-CD 3.24Å; E16-P24 WeakPolarHBondContact OE2-CG 3.4Å
17D94.3Very high76.5Confident45 Ų4598.6 Ų98.624%0.24155%0.549CS..BIsolated β-bridgetrans-148.1101.5179.5-174.1-6000110.5S19 Q20 L21 L22D17-S19 PolarHBondContact O-N 3.24Å; D17-S19 WeakPolarHBondContact OD1-CA 3.38Å; D17-S19 VanDerWaalsContact OD1-CB 3.24Å; D17-S19 WeakPolarHBondContact OD1-CB 3.31Å; D17-S19 PolarHBondContact OD1-N 3.03Å; D17-S19 PolarHBondContact OD1-OG 3.39Å; D17-S19 PolarHBondContact OD2-OG 3.26Å; D17-S19 VanDerWaalsContact OD2-OG 3.08Å; D17-Q20 HydrophobicContact CB-CB 4.33Å; D17-Q20 CarbonylContact O-C 3.32Å; D17-Q20 PolarHBondContact O-N 2.87Å; D17-Q20 VanDerWaalsContact O-N 3.07Å; D17-Q20 WeakPolarHBondContact OD2-CG 3.45Å; D17-Q20 PolarHBondContact OD2-NE2 3.08Å; D17-L21 PolarHBondContact O-N 3.07Å; D17-L21 VanDerWaalsContact O-N 3.11Å; D17-L22 HydrophobicContact CB-CB 4.26Å; D17-L22 HydrophobicContact CB-CD1 4.26Å; D17-L22 PolarHBondContact N-O 3.4Å; D17-L22 PolarHBondContact O-N 3.2Å
18A93.8Very high78.6Confident40 Ų40100 Ų10033%0.33154%0.543SS..G310 helixtrans-63.8-24.7177.900000113Q20 L21 F23 F96A18-Q20 PolarHBondContact O-N 2.9Å; A18-L21 PolarHBondContact O-N 3.01Å; A18-F23 HydrophobicContact CB-CE1 4.01Å; A18-F23 HydrophobicContact CB-CZ 4.17Å; A18-F96 HydrophobicContact CB-CE1 4.14Å; A18-F96 HydrophobicContact CB-CE2 4.32Å; A18-F96 HydrophobicContact CB-CZ 3.82Å
19S93.6Very high80.7Confident48 Ų48100.3 Ų100.334%0.33654%0.539SS..G310 helixtrans-69.5-21.917678.60000112.5D17 S118D17-S19 PolarHBondContact O-N 3.24Å; D17-S19 WeakPolarHBondContact OD1-CA 3.38Å; D17-S19 VanDerWaalsContact OD1-CB 3.24Å; D17-S19 WeakPolarHBondContact OD1-CB 3.31Å; D17-S19 PolarHBondContact OD1-N 3.03Å; D17-S19 PolarHBondContact OD1-OG 3.39Å; D17-S19 PolarHBondContact OD2-OG 3.26Å; D17-S19 VanDerWaalsContact OD2-OG 3.08Å; S19-S118 WeakPolarHBondContact O-CB 3.45Å; S19-S118 PolarHBondContact O-N 3.13Å
20Q93Very high83.2Confident128 Ų12896.5 Ų96.560%0.59852%0.52SS*.G310 helixtrans-110.47.6176.9-63.9-179.145.300112.9D17 A18 L22D17-Q20 HydrophobicContact CB-CB 4.33Å; D17-Q20 CarbonylContact O-C 3.32Å; D17-Q20 PolarHBondContact O-N 2.87Å; D17-Q20 VanDerWaalsContact O-N 3.07Å; D17-Q20 WeakPolarHBondContact OD2-CG 3.45Å; D17-Q20 PolarHBondContact OD2-NE2 3.08Å; A18-Q20 PolarHBondContact O-N 2.9Å; Q20-L22 HydrophobicContact CB-CD1 4.13Å; Q20-L22 HydrophobicContact CB-CG 3.94Å; Q20-L22 PolarHBondContact O-N 2.94Å
21L93Very high85.2Confident42 Ų4299.9 Ų99.922%0.2252%0.522CS..THydrogen-bonded Turntrans58.329.1-174-51.5174.9000114D17 A18 F23 H94 F96 E97D17-L21 PolarHBondContact O-N 3.07Å; D17-L21 VanDerWaalsContact O-N 3.11Å; A18-L21 PolarHBondContact O-N 3.01Å; L21-F23 HydrophobicContact CB-CE2 4.07Å; L21-F23 HydrophobicContact CD2-CE2 4Å; L21-F23 HydrophobicContact CD2-CZ 4.44Å; L21-F23 WeakPolarHBondContact O-CD2 3.5Å; L21-F23 PolarHBondContact O-N 3.34Å; L21-H94 HydrophobicContact CD1-CB 3.81Å; L21-H94 HydrophobicContact CD2-CB 4.21Å; L21-F96 HydrophobicContact CD2-CB 4.38Å; L21-F96 HydrophobicContact CD2-CD1 3.91Å; L21-E97 HydrophobicContact CD2-CG 4.09Å
22L93.8Very high87.3Confident72 Ų7295.2 Ų95.238%0.37749%0.494SS..BIsolated β-bridgetrans-86.998.3174.3-61.3179.4000108.8D17 Q20D17-L22 HydrophobicContact CB-CB 4.26Å; D17-L22 HydrophobicContact CB-CD1 4.26Å; D17-L22 PolarHBondContact N-O 3.4Å; D17-L22 PolarHBondContact O-N 3.2Å; Q20-L22 HydrophobicContact CB-CD1 4.13Å; Q20-L22 HydrophobicContact CB-CG 3.94Å; Q20-L22 PolarHBondContact O-N 2.94Å
23F92.2Very high89.4Confident61 Ų6196.7 Ų96.727%0.26849%0.488SS..  trans-112.5153.4176.9-59.5-76.2000111.1A18 L21 F27 H94 F96A18-F23 HydrophobicContact CB-CE1 4.01Å; A18-F23 HydrophobicContact CB-CZ 4.17Å; L21-F23 HydrophobicContact CB-CE2 4.07Å; L21-F23 HydrophobicContact CD2-CE2 4Å; L21-F23 HydrophobicContact CD2-CZ 4.44Å; L21-F23 WeakPolarHBondContact O-CD2 3.5Å; L21-F23 PolarHBondContact O-N 3.34Å; F23-F27 HydrophobicContact CB-CB 4.18Å; F23-H94 AromaticContact CD2-CE1 3.98Å; F23-H94 AromaticContact CE2-CE1 3.67Å; F23-F96 HydrophobicContact CE1-CD2 4.12Å; F23-F96 HydrophobicContact CE1-CE2 4.49Å; F23-F96 HydrophobicContact CE1-CG 4.36Å; F23-F96 HydrophobicContact CE2-CB 4.02Å; F23-F96 HydrophobicContact CE2-CG 4.26Å; F23-F96 HydrophobicContact CZ-CB 3.73Å; F23-F96 AromaticContact CZ-CD1 3.95Å; F23-F96 HydrophobicContact CZ-CD1 3.95Å; F23-F96 AromaticContact CZ-CD2 3.72Å; F23-F96 HydrophobicContact CZ-CD2 3.72Å; F23-F96 HydrophobicContact CZ-CE2 4.31Å; F23-F96 AromaticContact CZ-CG 3.51Å; F23-F96 HydrophobicContact CZ-CG 3.51Å
24P92Very high90.9Very high20 Ų2089.2 Ų89.213%0.1345%0.448CS..  trans-57.1156.4169.1-25.635.1000112.8E16 E26 F27E16-P24 HydrophobicContact CG-CG 3.73Å; E16-P24 WeakPolarHBondContact OE1-CG 3.44Å; E16-P24 WeakPolarHBondContact OE2-CD 3.24Å; E16-P24 WeakPolarHBondContact OE2-CG 3.4Å; P24-E26 WeakPolarHBondContact CB-OE2 3.46Å; P24-E26 PolarHBondContact O-N 2.96Å; P24-E26 VanDerWaalsContact O-N 3.16Å; P24-F27 HydrophobicContact CB-CD2 4.18Å; P24-F27 HydrophobicContact CG-CD2 4.16Å; P24-F27 PolarHBondContact O-N 3.06Å
25K89.5Confident92.3Very high146 Ų14686 Ų8664%0.63543%0.432SS*.G310 helixtrans-61.3-27.2-179.2-68.5-178.5178.6176.10112.5F27 E28K25-F27 PolarHBondContact O-N 2.59Å; K25-E28 WeakPolarHBondContact O-CB 3.2Å; K25-E28 PolarHBondContact O-N 2.88Å
26E91.6Very high92.7Very high156 Ų15677.8 Ų77.873%0.72939%0.394SS*.G310 helixtrans-59.9-27.9174.7-63.180.9-179.200112.2P24P24-E26 WeakPolarHBondContact CB-OE2 3.46Å; P24-E26 PolarHBondContact O-N 2.96Å; P24-E26 VanDerWaalsContact O-N 3.16Å
27F91.9Very high92.9Very high124 Ų12472.8 Ų72.854%0.54437%0.37SS..G310 helixtrans-101.2-2.6-178.9-66.3-72000114.3F23 P24 K25 N29 A30F23-F27 HydrophobicContact CB-CB 4.18Å; P24-F27 HydrophobicContact CB-CD2 4.18Å; P24-F27 HydrophobicContact CG-CD2 4.16Å; P24-F27 PolarHBondContact O-N 3.06Å; K25-F27 PolarHBondContact O-N 2.59Å; F27-N29 VanDerWaalsContact C-N 3.25Å; F27-N29 PolarHBondContact O-N 3.1Å; F27-A30 HydrophobicContact CB-CB 4.32Å; F27-A30 HydrophobicContact CD1-CB 3.94Å; F27-A30 WeakPolarHBondContact O-CB 3.47Å; F27-A30 PolarHBondContact O-N 3.35Å; F27-A30 VanDerWaalsContact O-N 3.09Å
28E85.4Confident93Very high142 Ų14272.2 Ų72.266%0.66437%0.368SS*.THydrogen-bonded Turntrans-55.9-40.7-178.1-174176-166.200112.2K25K25-E28 WeakPolarHBondContact O-CB 3.2Å; K25-E28 PolarHBondContact O-N 2.88Å
29N87.5Confident93.1Very high137 Ų13772.5 Ų72.573%0.73336%0.363SS*.THydrogen-bonded Turntrans-103.21.5178.8-67.4-58.6000113.8F27 K95F27-N29 VanDerWaalsContact C-N 3.25Å; F27-N29 PolarHBondContact O-N 3.1Å; N29-K95 PolarHBondContact O-NZ 3.3Å
30A91.9Very high93.1Very high38 Ų3873.7 Ų73.731%0.31436%0.364SS..PPolyproline II helixtrans-62.5147.5-178.200000111.2F27 K95F27-A30 HydrophobicContact CB-CB 4.32Å; F27-A30 HydrophobicContact CD1-CB 3.94Å; F27-A30 WeakPolarHBondContact O-CB 3.47Å; F27-A30 PolarHBondContact O-N 3.35Å; F27-A30 VanDerWaalsContact O-N 3.09Å; A30-K95 WeakPolarHBondContact O-CD 3.34Å; A30-K95 PolarHBondContact O-NZ 3.23Å
31E94.1Very high93.2Very high150 Ų15072.5 Ų72.570%0.70136%0.361SS*.PPolyproline II helixtrans-98.3142.3168.1-73.1-161.4166.400110.5
32T96Very high93.4Very high34 Ų3471.9 Ų71.921%0.20936%0.358CS..PPolyproline II helixtrans-90.3144.4176.152.90000110.8R85 K95 A99T32-R85 PolarHBondContact O-NH1 2.86Å; T32-R85 PolarHBondContact O-NH2 2.78Å; T32-K95 HydrophobicContact CG2-CB 3.94Å; T32-K95 PolarHBondContact OG1-O 3.46Å; T32-K95 VanDerWaalsContact OG1-O 3.05Å; T32-A99 HydrophobicContact CG2-CB 4.24Å
33L96.2Very high93.5Very high87 Ų8771.3 Ų71.346%0.45535%0.353SS..  trans-112141.9172.2-64.7173.9000110.3E37 V38 L41L33-E37 VanDerWaalsContact CA-OE2 3.3Å; L33-E37 WeakPolarHBondContact CA-OE2 3.34Å; L33-E37 HydrophobicContact CD2-CB 4.37Å; L33-V38 HydrophobicContact CB-CG2 3.63Å; L33-V38 HydrophobicContact CD1-CG2 4.1Å; L33-L41 HydrophobicContact CD1-CD1 4.19Å
34L95.9Very high93.5Very high1 Ų173.2 Ų73.21%0.00536%0.363CS..  trans-76.2151.3170.4-53.6-173.9000109.8S36 E37 V38 I81 L98 A99 A102L34-S36 PolarHBondContact O-N 2.96Å; L34-S36 VanDerWaalsContact O-N 3.13Å; L34-E37 HydrophobicContact CB-CB 4.38Å; L34-E37 HydrophobicContact CB-CG 4.03Å; L34-E37 HydrophobicContact CG-CG 4.37Å; L34-E37 PolarHBondContact N-OE2 2.79Å; L34-E37 WeakPolarHBondContact O-CB 3.43Å; L34-E37 PolarHBondContact O-N 2.88Å; L34-V38 WeakPolarHBondContact O-CG2 3.46Å; L34-V38 PolarHBondContact O-N 2.77Å; L34-I81 HydrophobicContact CD1-CG2 4.39Å; L34-L98 HydrophobicContact CD2-CD2 4.36Å; L34-A99 HydrophobicContact CD2-CB 4.12Å; L34-A102 HydrophobicContact CD1-CB 4.06Å; L34-A102 HydrophobicContact CD2-CB 3.55Å; L34-A102 HydrophobicContact CG-CB 4.43Å
35N95.6Very high93.6Very high29 Ų2977.7 Ų77.716%0.15538%0.377CS..Hα-helixtrans-53.3-38.5174.9-73.1-26.4000111.5V38 H39 T69 N103N35-V38 PolarHBondContact O-N 3.11Å; N35-H39 WeakPolarHBondContact O-CB 3.28Å; N35-H39 PolarHBondContact O-N 2.94Å; N35-T69 WeakPolarHBondContact O-CB 3.48Å; N35-N103 PolarHBondContact N-OD1 3.4Å
36S94.6Very high93.9Very high1 Ų173.3 Ų73.31%0.00736%0.358CS..Hα-helixtrans-63.4-40.8174.7-63.90000113.7L34 M40 S73 R74 F75L34-S36 PolarHBondContact O-N 2.96Å; L34-S36 VanDerWaalsContact O-N 3.13Å; S36-M40 WeakPolarHBondContact O-CG 3.39Å; S36-M40 PolarHBondContact O-N 2.91Å; S36-M40 VanDerWaalsContact O-N 3.12Å; S36-S73 PolarHBondContact OG-OG 3.35Å; S36-R74 PolarHBondContact OG-N 2.95Å; S36-F75 WeakPolarHBondContact CB-O 3.49Å; S36-F75 PolarHBondContact OG-N 2.86Å; S36-F75 VanDerWaalsContact OG-N 3.07Å; S36-F75 PolarHBondContact OG-O 3.31Å
37E94.9Very high94Very high28 Ų2870.4 Ų70.413%0.13134%0.344CS..Hα-helixtrans-67.8-44.9176.5-67.8170.7153.500110.7L33 L34 H39 M40 L41 I81 R85L33-E37 VanDerWaalsContact CA-OE2 3.3Å; L33-E37 WeakPolarHBondContact CA-OE2 3.34Å; L33-E37 HydrophobicContact CD2-CB 4.37Å; L34-E37 HydrophobicContact CB-CB 4.38Å; L34-E37 HydrophobicContact CB-CG 4.03Å; L34-E37 HydrophobicContact CG-CG 4.37Å; L34-E37 PolarHBondContact N-OE2 2.79Å; L34-E37 WeakPolarHBondContact O-CB 3.43Å; L34-E37 PolarHBondContact O-N 2.88Å; E37-H39 VanDerWaalsContact C-N 3.33Å; E37-H39 PolarHBondContact O-N 3.06Å; E37-M40 PolarHBondContact O-N 3.08Å; E37-L41 WeakPolarHBondContact O-CG 3.3Å; E37-L41 PolarHBondContact O-N 3.33Å; E37-I81 HydrophobicContact CG-CG2 3.46Å; E37-I81 VanDerWaalsContact CG-CG2 3.46Å; E37-R85 WeakPolarHBondContact OE1-CD 3.14Å; E37-R85 IonicContact OE1-CZ 3.05Å; E37-R85 IonicContact OE1-NE 3.82Å; E37-R85 IonicContact OE1-NH1 2.61Å; E37-R85 PolarHBondContact OE1-NH1 2.92Å; E37-R85 IonicContact OE2-CZ 2.85Å; E37-R85 IonicContact OE2-NH1 3.32Å; E37-R85 PolarHBondContact OE2-NH1 3.13Å
38V96.7Very high94.1Very high32 Ų3269.5 Ų69.519%0.19434%0.342CS..Hα-helixtrans-59.6-46.3176.4-179.80000110.2L33 L34 N35 M40 L41 L42 T65 T69L33-V38 HydrophobicContact CB-CG2 3.63Å; L33-V38 HydrophobicContact CD1-CG2 4.1Å; L34-V38 WeakPolarHBondContact O-CG2 3.46Å; L34-V38 PolarHBondContact O-N 2.77Å; N35-V38 PolarHBondContact O-N 3.11Å; V38-M40 VanDerWaalsContact C-N 3.35Å; V38-M40 PolarHBondContact O-N 2.66Å; V38-L41 PolarHBondContact O-N 3.09Å; V38-L42 HydrophobicContact CG1-CD1 3.68Å; V38-L42 HydrophobicContact CG1-CG 4.05Å; V38-L42 WeakPolarHBondContact O-CB 3.28Å; V38-L42 VanDerWaalsContact O-CG 3.26Å; V38-L42 WeakPolarHBondContact O-CG 3.32Å; V38-L42 PolarHBondContact O-N 2.91Å; V38-T65 HydrophobicContact CG1-CG2 4.27Å; V38-T69 HydrophobicContact CB-CG2 3.99Å; V38-T69 HydrophobicContact CG1-CG2 3.79Å
39H96.1Very high94.4Very high47 Ų4763.3 Ų63.322%0.21831%0.314CS..Hα-helixtrans-56.6-48.1177.3-179.853.3000111.8N35 E37 L41 L42 E43 A70N35-H39 WeakPolarHBondContact O-CB 3.28Å; N35-H39 PolarHBondContact O-N 2.94Å; E37-H39 VanDerWaalsContact C-N 3.33Å; E37-H39 PolarHBondContact O-N 3.06Å; H39-L41 PolarHBondContact O-N 3.15Å; H39-L42 PolarHBondContact O-N 3.01Å; H39-E43 VanDerWaalsContact O-CB 3.31Å; H39-E43 WeakPolarHBondContact O-CB 3.41Å; H39-E43 PolarHBondContact O-N 3.41Å; H39-A70 VanDerWaalsContact CE1-CB 3.44Å; H39-A70 WeakPolarHBondContact CE1-CB 3.29Å
40M93.7Very high94.6Very high73 Ų7361.5 Ų61.536%0.3630%0.3SS..Hα-helixtrans-60.9-43.1178.3-74.3-169.275.300113.1S36 E37 V38 H44 R78 I81S36-M40 WeakPolarHBondContact O-CG 3.39Å; S36-M40 PolarHBondContact O-N 2.91Å; S36-M40 VanDerWaalsContact O-N 3.12Å; E37-M40 PolarHBondContact O-N 3.08Å; V38-M40 VanDerWaalsContact C-N 3.35Å; V38-M40 PolarHBondContact O-N 2.66Å; M40-H44 WeakPolarHBondContact O-CB 3.31Å; M40-H44 PolarHBondContact O-N 2.88Å; M40-R78 HydrophobicContact CE-CB 3.74Å; M40-R78 HydrophobicContact CE-CG 3.88Å; M40-R78 HydrophobicContact SD-CB 4.05Å; M40-R78 HydrophobicContact SD-CG 4.2Å; M40-I81 HydrophobicContact CG-CD1 4.28Å; M40-I81 HydrophobicContact SD-CD1 3.5Å; M40-I81 WeakPolarHBondContact SD-CD1 3.45Å
41L95.5Very high94.6Very high102 Ų10264.6 Ų64.653%0.53432%0.32SS..Hα-helixtrans-66.2-43179.7-70.8170.5000111.6L33 E37 V38 H39 R45L33-L41 HydrophobicContact CD1-CD1 4.19Å; E37-L41 WeakPolarHBondContact O-CG 3.3Å; E37-L41 PolarHBondContact O-N 3.33Å; V38-L41 PolarHBondContact O-N 3.09Å; H39-L41 PolarHBondContact O-N 3.15Å; L41-R45 WeakPolarHBondContact O-CB 3.36Å; L41-R45 PolarHBondContact O-N 3.33Å
42L96.4Very high94.5Very high30 Ų3059.6 Ų59.616%0.15731%0.305CS..Hα-helixtrans-67.7-42177.4-65.2178.4000111.1V38 H39 H44 R45 K46 F62 T65 L66V38-L42 HydrophobicContact CG1-CD1 3.68Å; V38-L42 HydrophobicContact CG1-CG 4.05Å; V38-L42 WeakPolarHBondContact O-CB 3.28Å; V38-L42 VanDerWaalsContact O-CG 3.26Å; V38-L42 WeakPolarHBondContact O-CG 3.32Å; V38-L42 PolarHBondContact O-N 2.91Å; H39-L42 PolarHBondContact O-N 3.01Å; L42-H44 VanDerWaalsContact C-N 3.35Å; L42-H44 PolarHBondContact O-N 3.03Å; L42-R45 PolarHBondContact O-N 3.06Å; L42-K46 WeakPolarHBondContact O-CB 3.4Å; L42-K46 PolarHBondContact O-N 2.92Å; L42-F62 HydrophobicContact CB-CE2 4.29Å; L42-F62 HydrophobicContact CB-CZ 4.01Å; L42-F62 HydrophobicContact CD2-CD2 3.77Å; L42-F62 HydrophobicContact CD2-CE2 3.41Å; L42-F62 VanDerWaalsContact CD2-CE2 3.41Å; L42-F62 HydrophobicContact CD2-CZ 4.02Å; L42-F62 HydrophobicContact CG-CE2 4.41Å; L42-F62 VanDerWaalsContact O-CZ 3.29Å; L42-F62 WeakPolarHBondContact O-CZ 3.33Å; L42-T65 HydrophobicContact CD1-CG2 3.68Å; L42-L66 HydrophobicContact CB-CB 4.39Å; L42-L66 HydrophobicContact CB-CD1 3.7Å; L42-L66 HydrophobicContact CD1-CB 4.25Å
43E94.8Very high94Very high59 Ų5967.5 Ų67.528%0.27634%0.339SS..Hα-helixtrans-61.4-44.5177.3-168.663.7-158.300111.2H39 R45 K46 Q47 L66H39-E43 VanDerWaalsContact O-CB 3.31Å; H39-E43 WeakPolarHBondContact O-CB 3.41Å; H39-E43 PolarHBondContact O-N 3.41Å; E43-R45 PolarHBondContact O-N 3.01Å; E43-K46 WeakPolarHBondContact O-CB 3.36Å; E43-K46 PolarHBondContact O-N 3.22Å; E43-Q47 WeakPolarHBondContact O-CG 3.37Å; E43-Q47 PolarHBondContact O-N 2.9Å; E43-L66 HydrophobicContact CB-CD1 4.43Å
44H93.9Very high93.5Very high102 Ų10269.9 Ų69.947%0.47235%0.352SS..Hα-helixtrans-62.4-42.9174.6179.6-106.1000112M40 L42 K46 Q47 Q48M40-H44 WeakPolarHBondContact O-CB 3.31Å; M40-H44 PolarHBondContact O-N 2.88Å; L42-H44 VanDerWaalsContact C-N 3.35Å; L42-H44 PolarHBondContact O-N 3.03Å; H44-K46 VanDerWaalsContact C-N 3.28Å; H44-K46 PolarHBondContact O-N 2.94Å; H44-Q47 PolarHBondContact O-N 2.77Å; H44-Q48 VanDerWaalsContact CE1-CD 3.46Å; H44-Q48 PolarHBondContact CE1-NE2 2.89Å; H44-Q48 WeakPolarHBondContact O-CG 3.34Å; H44-Q48 PolarHBondContact O-N 2.85Å
45R94.1Very high93Very high114 Ų11475.8 Ų75.843%0.4338%0.38SS..Hα-helixtrans-64-33.6177.2178.658-17885.9-1.5112.4L41 L42 E43 N49 F62L41-R45 WeakPolarHBondContact O-CB 3.36Å; L41-R45 PolarHBondContact O-N 3.33Å; L42-R45 PolarHBondContact O-N 3.06Å; E43-R45 PolarHBondContact O-N 3.01Å; R45-N49 PolarHBondContact NH1-OD1 2.97Å; R45-N49 PolarHBondContact O-N 3.03Å; R45-F62 HydrophobicContact CB-CE2 4.18Å; R45-F62 HydrophobicContact CB-CZ 4.24Å; R45-F62 HydrophobicContact CG-CE2 3.88Å; R45-F62 HydrophobicContact CG-CZ 4.25Å
46K94.3Very high92.7Very high53 Ų5381.1 Ų81.123%0.2340%0.404CS..Hα-helixtrans-67.5-48.1174.1179.4-176.5164-164.10110.9L42 E43 H44 Q48 N49 E50 L58 F62 L66L42-K46 WeakPolarHBondContact O-CB 3.4Å; L42-K46 PolarHBondContact O-N 2.92Å; E43-K46 WeakPolarHBondContact O-CB 3.36Å; E43-K46 PolarHBondContact O-N 3.22Å; H44-K46 VanDerWaalsContact C-N 3.28Å; H44-K46 PolarHBondContact O-N 2.94Å; K46-Q48 VanDerWaalsContact C-N 3.31Å; K46-Q48 PolarHBondContact O-N 3.27Å; K46-N49 WeakPolarHBondContact O-CA 3.48Å; K46-N49 WeakPolarHBondContact O-CB 3.48Å; K46-N49 PolarHBondContact O-N 3.38Å; K46-E50 WeakPolarHBondContact CE-OE1 3.29Å; K46-E50 IonicContact NZ-OE1 3.81Å; K46-E50 WeakPolarHBondContact O-CG 3.37Å; K46-E50 PolarHBondContact O-N 3.32Å; K46-L58 HydrophobicContact CB-CD1 4.02Å; K46-L58 HydrophobicContact CG-CD1 3.86Å; K46-F62 HydrophobicContact CB-CE1 4.17Å; K46-F62 HydrophobicContact CB-CZ 4.21Å; K46-L66 HydrophobicContact CD-CD2 3.77Å
47Q94.1Very high92.4Very high95 Ų9590.4 Ų90.444%0.44445%0.447SS..Hα-helixtrans-59.6-40.7176.6-70.6171.98.500112.6E43 H44 N49 E50 S51E43-Q47 WeakPolarHBondContact O-CG 3.37Å; E43-Q47 PolarHBondContact O-N 2.9Å; H44-Q47 PolarHBondContact O-N 2.77Å; Q47-N49 PolarHBondContact O-N 3.02Å; Q47-E50 PolarHBondContact O-N 3.29Å; Q47-S51 WeakPolarHBondContact O-CB 3.45Å; Q47-S51 PolarHBondContact O-N 2.79Å; Q47-S51 VanDerWaalsContact O-N 3.08Å; Q47-S51 PolarHBondContact O-OG 2.82Å
48Q93.6Very high92.3Very high105 Ų10590.6 Ų90.649%0.49145%0.449SS..Hα-helixtrans-61.5-34.3173.7-74.7-175.4-31.600112.6H44 K46 A52H44-Q48 VanDerWaalsContact CE1-CD 3.46Å; H44-Q48 PolarHBondContact CE1-NE2 2.89Å; H44-Q48 WeakPolarHBondContact O-CG 3.34Å; H44-Q48 PolarHBondContact O-N 2.85Å; K46-Q48 VanDerWaalsContact C-N 3.31Å; K46-Q48 PolarHBondContact O-N 3.27Å; Q48-A52 PolarHBondContact O-N 2.78Å
49N92.4Very high92.3Very high13 Ų1392.5 Ų92.57%0.0746%0.464CS..Hα-helixtrans-70.4-47.6178-163.183.7000111.7R45 K46 Q47 S51 A52 E55 Q56 L58R45-N49 PolarHBondContact NH1-OD1 2.97Å; R45-N49 PolarHBondContact O-N 3.03Å; K46-N49 WeakPolarHBondContact O-CA 3.48Å; K46-N49 WeakPolarHBondContact O-CB 3.48Å; K46-N49 PolarHBondContact O-N 3.38Å; Q47-N49 PolarHBondContact O-N 3.02Å; N49-S51 PolarHBondContact O-N 2.86Å; N49-A52 WeakPolarHBondContact O-CB 3Å; N49-A52 PolarHBondContact O-N 3.19Å; N49-A52 VanDerWaalsContact O-N 3.15Å; N49-E55 WeakPolarHBondContact ND2-CG 3.02Å; N49-Q56 PolarHBondContact ND2-O 2.89Å; N49-L58 HydrophobicContact CB-CD1 4.46Å; N49-L58 HydrophobicContact CB-CD2 4.19Å
50E92.3Very high92.4Very high98 Ų9896.6 Ų96.646%0.45848%0.483SS..Hα-helixtrans-64.1-24.8178.7-68172.4163.600112.4K46 Q47K46-E50 WeakPolarHBondContact CE-OE1 3.29Å; K46-E50 IonicContact NZ-OE1 3.81Å; K46-E50 WeakPolarHBondContact O-CG 3.37Å; K46-E50 PolarHBondContact O-N 3.32Å; Q47-E50 PolarHBondContact O-N 3.29Å
51S91.4Very high92.6Very high103 Ų10398.1 Ų98.172%0.7250%0.496SS*.THydrogen-bonded Turntrans-92.9-2.9178.4-52.70000113.6Q47 N49Q47-S51 WeakPolarHBondContact O-CB 3.45Å; Q47-S51 PolarHBondContact O-N 2.79Å; Q47-S51 VanDerWaalsContact O-N 3.08Å; Q47-S51 PolarHBondContact O-OG 2.82Å; N49-S51 PolarHBondContact O-N 2.86Å
52A92.4Very high92.6Very high46 Ų4694.6 Ų94.638%0.3848%0.476SS..SBendtrans-80.8146.2-179.100000111.1Q48 N49 D54Q48-A52 PolarHBondContact O-N 2.78Å; N49-A52 WeakPolarHBondContact O-CB 3Å; N49-A52 PolarHBondContact O-N 3.19Å; N49-A52 VanDerWaalsContact O-N 3.15Å; A52-D54 VanDerWaalsContact C-N 3.25Å; A52-D54 PolarHBondContact O-N 2.61Å
53E84.8Confident92.6Very high200 Ų20096.7 Ų96.794%0.93549%0.486SS*.THydrogen-bonded Turntrans-62.4-35.2177.5-65.3-175.5164.900112.1
54D85.3Confident92.8Very high136 Ų136100 Ų10073%0.72750%0.499SS*.THydrogen-bonded Turntrans-10973.5174-66.9-40.6000110A52 Q56A52-D54 VanDerWaalsContact C-N 3.25Å; A52-D54 PolarHBondContact O-N 2.61Å; D54-Q56 PolarHBondContact O-N 3.15Å
55E86.9Confident93Very high126 Ų12697.6 Ų97.659%0.58949%0.492SS*.  trans-58.9125.5175.5-173.7-179.2179.300110.6N49N49-E55 WeakPolarHBondContact ND2-CG 3.02Å
56Q88.1Confident93.1Very high140 Ų14092.5 Ų92.565%0.65447%0.474SS*.  trans-108.1143.6175.9-66.6178.134.100110.4N49 D54 L58N49-Q56 PolarHBondContact ND2-O 2.89Å; D54-Q56 PolarHBondContact O-N 3.15Å; Q56-L58 PolarHBondContact O-N 3.31Å
57E89.3Confident93.2Very high197 Ų19795.1 Ų95.192%0.92149%0.49SS*.PPolyproline II helixtrans-62.3125.7172-68.8-173.1172.100110.5
58L93.4Very high93.4Very high32 Ų3296.5 Ų96.517%0.16849%0.492CS..PPolyproline II helixtrans-72.3143.2175.2-60.3167.7000109.4K46 N49 Q56 F62 M63K46-L58 HydrophobicContact CB-CD1 4.02Å; K46-L58 HydrophobicContact CG-CD1 3.86Å; N49-L58 HydrophobicContact CB-CD1 4.46Å; N49-L58 HydrophobicContact CB-CD2 4.19Å; Q56-L58 PolarHBondContact O-N 3.31Å; L58-F62 HydrophobicContact CB-CB 4.34Å; L58-F62 HydrophobicContact CB-CD1 3.83Å; L58-F62 HydrophobicContact CB-CE1 4.4Å; L58-F62 HydrophobicContact CB-CG 4.15Å; L58-F62 HydrophobicContact CD1-CD1 3.8Å; L58-F62 HydrophobicContact CD1-CE1 3.49Å; L58-F62 VanDerWaalsContact CD1-CE1 3.49Å; L58-F62 HydrophobicContact CD1-CZ 4.03Å; L58-F62 HydrophobicContact CG-CD1 4.27Å; L58-F62 HydrophobicContact CG-CE1 4.36Å; L58-M63 HydrophobicContact CB-CE 4.07Å; L58-M63 HydrophobicContact CD1-CE 4.17Å
59S96.3Very high93.5Very high72 Ų7291.7 Ų91.750%0.50347%0.47SS..PPolyproline II helixtrans-62.1156.7-175.272.60000112.9V61 F62 M63S59-V61 PolarHBondContact O-N 2.94Å; S59-F62 VanDerWaalsContact O-CB 3.3Å; S59-F62 WeakPolarHBondContact O-CB 3.28Å; S59-F62 PolarHBondContact O-N 3.45Å; S59-F62 PolarHBondContact OG-N 3.46Å; S59-M63 PolarHBondContact O-N 3.44Å
60E96.9Very high93.5Very high133 Ų13393.2 Ų93.262%0.62148%0.484SS*.Hα-helixtrans-57.4-38.5175.5-170.9-173.217400111.9F62 M63 K64E60-F62 VanDerWaalsContact C-N 3.31Å; E60-F62 PolarHBondContact O-N 3.13Å; E60-M63 PolarHBondContact O-N 3.5Å; E60-K64 HydrophobicContact CG-CD 4.21Å; E60-K64 WeakPolarHBondContact O-CB 3.42Å; E60-K64 WeakPolarHBondContact O-CG 3.32Å; E60-K64 PolarHBondContact O-N 3.49Å; E60-K64 WeakPolarHBondContact OE1-CE 3.35Å; E60-K64 IonicContact OE1-NZ 2.84Å; E60-K64 PolarHBondContact OE1-NZ 3.24Å
61V97.7Very high93.6Very high104 Ų10498.3 Ų98.363%0.6350%0.499SS*.Hα-helixtrans-61.5-41.5175.9178.20000110.8S59 T65S59-V61 PolarHBondContact O-N 2.94Å; V61-T65 WeakPolarHBondContact O-CB 3.29Å; V61-T65 PolarHBondContact O-N 3.47Å; V61-T65 PolarHBondContact O-OG1 2.84Å
62F97.1Very high93.8Very high28 Ų2897 Ų9712%0.12348%0.481CS..Hα-helixtrans-60.9-52176.5-176.9-80.1000110.8L42 R45 K46 L58 S59 E60 K64 T65 L66L42-F62 HydrophobicContact CB-CE2 4.29Å; L42-F62 HydrophobicContact CB-CZ 4.01Å; L42-F62 HydrophobicContact CD2-CD2 3.77Å; L42-F62 HydrophobicContact CD2-CE2 3.41Å; L42-F62 VanDerWaalsContact CD2-CE2 3.41Å; L42-F62 HydrophobicContact CD2-CZ 4.02Å; L42-F62 HydrophobicContact CG-CE2 4.41Å; L42-F62 VanDerWaalsContact O-CZ 3.29Å; L42-F62 WeakPolarHBondContact O-CZ 3.33Å; R45-F62 HydrophobicContact CB-CE2 4.18Å; R45-F62 HydrophobicContact CB-CZ 4.24Å; R45-F62 HydrophobicContact CG-CE2 3.88Å; R45-F62 HydrophobicContact CG-CZ 4.25Å; K46-F62 HydrophobicContact CB-CE1 4.17Å; K46-F62 HydrophobicContact CB-CZ 4.21Å; L58-F62 HydrophobicContact CB-CB 4.34Å; L58-F62 HydrophobicContact CB-CD1 3.83Å; L58-F62 HydrophobicContact CB-CE1 4.4Å; L58-F62 HydrophobicContact CB-CG 4.15Å; L58-F62 HydrophobicContact CD1-CD1 3.8Å; L58-F62 HydrophobicContact CD1-CE1 3.49Å; L58-F62 VanDerWaalsContact CD1-CE1 3.49Å; L58-F62 HydrophobicContact CD1-CZ 4.03Å; L58-F62 HydrophobicContact CG-CD1 4.27Å; L58-F62 HydrophobicContact CG-CE1 4.36Å; S59-F62 VanDerWaalsContact O-CB 3.3Å; S59-F62 WeakPolarHBondContact O-CB 3.28Å; S59-F62 PolarHBondContact O-N 3.45Å; S59-F62 PolarHBondContact OG-N 3.46Å; E60-F62 VanDerWaalsContact C-N 3.31Å; E60-F62 PolarHBondContact O-N 3.13Å; F62-K64 PolarHBondContact O-N 3.21Å; F62-T65 PolarHBondContact O-N 3.09Å; F62-L66 HydrophobicContact CE1-CB 4.47Å; F62-L66 HydrophobicContact CE1-CD2 4.17Å; F62-L66 WeakPolarHBondContact O-CB 3.26Å; F62-L66 PolarHBondContact O-N 2.86Å
63M96.2Very high93.7Very high75 Ų7595.8 Ų95.837%0.36947%0.47SS..Hα-helixtrans-63.1-41.5-178.2-68.5-58.3-16300112.2L58 S59 E60 L66 N67L58-M63 HydrophobicContact CB-CE 4.07Å; L58-M63 HydrophobicContact CD1-CE 4.17Å; S59-M63 PolarHBondContact O-N 3.44Å; E60-M63 PolarHBondContact O-N 3.5Å; M63-L66 PolarHBondContact O-N 3.15Å; M63-N67 WeakPolarHBondContact O-CB 3.42Å; M63-N67 VanDerWaalsContact O-CG 3.24Å; M63-N67 PolarHBondContact O-N 2.95Å; M63-N67 PolarHBondContact O-ND2 3.08Å; M63-N67 VanDerWaalsContact O-ND2 3.12Å
64K98Very high93.9Very high127 Ų12791 Ų9155%0.55244%0.443SS*.Hα-helixtrans-61.4-45.5174.7-75.9178.7179.1171.90111.8E60 F62 N67 Y68E60-K64 HydrophobicContact CG-CD 4.21Å; E60-K64 WeakPolarHBondContact O-CB 3.42Å; E60-K64 WeakPolarHBondContact O-CG 3.32Å; E60-K64 PolarHBondContact O-N 3.49Å; E60-K64 WeakPolarHBondContact OE1-CE 3.35Å; E60-K64 IonicContact OE1-NZ 2.84Å; E60-K64 PolarHBondContact OE1-NZ 3.24Å; F62-K64 PolarHBondContact O-N 3.21Å; K64-N67 PolarHBondContact O-N 3.19Å; K64-Y68 WeakPolarHBondContact O-CB 3.45Å; K64-Y68 PolarHBondContact O-N 3.4Å
65T97.8Very high94.1Very high53 Ų5384.5 Ų84.533%0.32541%0.408SS..Hα-helixtrans-66.4-42.3179.9-51.40000111.2V38 L42 V61 F62 N67 Y68 T69V38-T65 HydrophobicContact CG1-CG2 4.27Å; L42-T65 HydrophobicContact CD1-CG2 3.68Å; V61-T65 WeakPolarHBondContact O-CB 3.29Å; V61-T65 PolarHBondContact O-N 3.47Å; V61-T65 PolarHBondContact O-OG1 2.84Å; F62-T65 PolarHBondContact O-N 3.09Å; T65-N67 PolarHBondContact O-N 3.45Å; T65-Y68 PolarHBondContact O-N 3.44Å; T65-T69 HydrophobicContact CG2-CG2 4.26Å; T65-T69 WeakPolarHBondContact O-CB 3.35Å; T65-T69 VanDerWaalsContact O-CG2 3.31Å; T65-T69 WeakPolarHBondContact O-CG2 3.47Å; T65-T69 PolarHBondContact O-N 3.31Å; T65-T69 PolarHBondContact O-OG1 3.16Å
66L96.5Very high94Very high7 Ų785.9 Ų85.94%0.03741%0.412CS..Hα-helixtrans-59.9-48.1176.1178.363.6000111L42 E43 K46 F62 M63 T69 A70L42-L66 HydrophobicContact CB-CB 4.39Å; L42-L66 HydrophobicContact CB-CD1 3.7Å; L42-L66 HydrophobicContact CD1-CB 4.25Å; E43-L66 HydrophobicContact CB-CD1 4.43Å; K46-L66 HydrophobicContact CD-CD2 3.77Å; F62-L66 HydrophobicContact CE1-CB 4.47Å; F62-L66 HydrophobicContact CE1-CD2 4.17Å; F62-L66 WeakPolarHBondContact O-CB 3.26Å; F62-L66 PolarHBondContact O-N 2.86Å; M63-L66 PolarHBondContact O-N 3.15Å; L66-T69 PolarHBondContact O-N 3.33Å; L66-T69 PolarHBondContact O-OG1 2.87Å; L66-T69 VanDerWaalsContact O-OG1 3.1Å; L66-A70 VanDerWaalsContact O-CB 3.22Å; L66-A70 WeakPolarHBondContact O-CB 3.33Å; L66-A70 PolarHBondContact O-N 2.96Å
67N96.4Very high93.9Very high107 Ų10782.6 Ų82.657%0.57240%0.399SS*.Hα-helixtrans-65.8-40.8179.6-71.9-30.2000112.7M63 K64 T65 R71M63-N67 WeakPolarHBondContact O-CB 3.42Å; M63-N67 VanDerWaalsContact O-CG 3.24Å; M63-N67 PolarHBondContact O-N 2.95Å; M63-N67 PolarHBondContact O-ND2 3.08Å; M63-N67 VanDerWaalsContact O-ND2 3.12Å; K64-N67 PolarHBondContact O-N 3.19Å; T65-N67 PolarHBondContact O-N 3.45Å; N67-R71 WeakPolarHBondContact O-CB 3.42Å; N67-R71 PolarHBondContact O-N 3.13Å
68Y97.8Very high93.9Very high125 Ų12582.2 Ų82.249%0.4939%0.389SS..Hα-helixtrans-61.7-51.6175.8176.1-93.6000110.9K64 T65 A70 R71 F72K64-Y68 WeakPolarHBondContact O-CB 3.45Å; K64-Y68 PolarHBondContact O-N 3.4Å; T65-Y68 PolarHBondContact O-N 3.44Å; Y68-A70 VanDerWaalsContact C-N 3.33Å; Y68-A70 PolarHBondContact O-N 2.99Å; Y68-R71 PolarHBondContact O-N 3.43Å; Y68-R71 VanDerWaalsContact O-N 3.15Å; Y68-F72 HydrophobicContact CD1-CD2 4.37Å; Y68-F72 AromaticContact CD2-CD2 3.52Å; Y68-F72 HydrophobicContact CD2-CD2 3.52Å; Y68-F72 AromaticContact CD2-CE2 3.61Å; Y68-F72 HydrophobicContact CD2-CE2 3.61Å; Y68-F72 HydrophobicContact CE1-CD2 4.2Å; Y68-F72 AromaticContact CE2-CD2 3.31Å; Y68-F72 HydrophobicContact CE2-CD2 3.31Å; Y68-F72 AromaticContact CE2-CE2 3.35Å; Y68-F72 HydrophobicContact CE2-CE2 3.35Å; Y68-F72 HydrophobicContact CE2-CG 4.35Å; Y68-F72 HydrophobicContact CE2-CZ 4.41Å; Y68-F72 HydrophobicContact CG-CD2 4.06Å; Y68-F72 AromaticContact CZ-CD2 3.67Å; Y68-F72 WeakPolarHBondContact O-CD2 3.42Å; Y68-F72 PolarHBondContact O-N 2.97Å
69T96.4Very high93.8Very high3 Ų387.8 Ų87.82%0.01841%0.414CS..Hα-helixtrans-67.7-33.6-178.254.80000112.1N35 V38 T65 L66 S73N35-T69 WeakPolarHBondContact O-CB 3.48Å; V38-T69 HydrophobicContact CB-CG2 3.99Å; V38-T69 HydrophobicContact CG1-CG2 3.79Å; T65-T69 HydrophobicContact CG2-CG2 4.26Å; T65-T69 WeakPolarHBondContact O-CB 3.35Å; T65-T69 VanDerWaalsContact O-CG2 3.31Å; T65-T69 WeakPolarHBondContact O-CG2 3.47Å; T65-T69 PolarHBondContact O-N 3.31Å; T65-T69 PolarHBondContact O-OG1 3.16Å; L66-T69 PolarHBondContact O-N 3.33Å; L66-T69 PolarHBondContact O-OG1 2.87Å; L66-T69 VanDerWaalsContact O-OG1 3.1Å; T69-S73 WeakPolarHBondContact O-CA 3.32Å; T69-S73 WeakPolarHBondContact O-CB 3.48Å; T69-S73 PolarHBondContact O-N 2.86Å
70A93.5Very high93.6Very high46 Ų4685.4 Ų85.438%0.3840%0.397SS..Hα-helixtrans-61.3-44.6170.400000112H39 L66 Y68H39-A70 VanDerWaalsContact CE1-CB 3.44Å; H39-A70 WeakPolarHBondContact CE1-CB 3.29Å; L66-A70 VanDerWaalsContact O-CB 3.22Å; L66-A70 WeakPolarHBondContact O-CB 3.33Å; L66-A70 PolarHBondContact O-N 2.96Å; Y68-A70 VanDerWaalsContact C-N 3.33Å; Y68-A70 PolarHBondContact O-N 2.99Å
71R94.3Very high93.4Very high205 Ų20579.4 Ų79.477%0.77437%0.369SS*.Hα-helixtrans-69-38.5-178.5-176.8176-178.7175.90.3113N67 Y68N67-R71 WeakPolarHBondContact O-CB 3.42Å; N67-R71 PolarHBondContact O-N 3.13Å; Y68-R71 PolarHBondContact O-N 3.43Å; Y68-R71 VanDerWaalsContact O-N 3.15Å
72F94.1Very high93.2Very high76 Ų7676.9 Ų76.933%0.33336%0.359SS..Hα-helixtrans-103.34.4-175.7-67.8-72.5000113.9Y68 R74Y68-F72 HydrophobicContact CD1-CD2 4.37Å; Y68-F72 AromaticContact CD2-CD2 3.52Å; Y68-F72 HydrophobicContact CD2-CD2 3.52Å; Y68-F72 AromaticContact CD2-CE2 3.61Å; Y68-F72 HydrophobicContact CD2-CE2 3.61Å; Y68-F72 HydrophobicContact CE1-CD2 4.2Å; Y68-F72 AromaticContact CE2-CD2 3.31Å; Y68-F72 HydrophobicContact CE2-CD2 3.31Å; Y68-F72 AromaticContact CE2-CE2 3.35Å; Y68-F72 HydrophobicContact CE2-CE2 3.35Å; Y68-F72 HydrophobicContact CE2-CG 4.35Å; Y68-F72 HydrophobicContact CE2-CZ 4.41Å; Y68-F72 HydrophobicContact CG-CD2 4.06Å; Y68-F72 AromaticContact CZ-CD2 3.67Å; Y68-F72 WeakPolarHBondContact O-CD2 3.42Å; Y68-F72 PolarHBondContact O-N 2.97Å; F72-R74 PolarHBondContact O-N 2.89Å; F72-R74 VanDerWaalsContact O-N 3.16Å
73S91.3Very high93Very high20 Ų2078 Ų7814%0.1437%0.37CS..  trans-60.7119171.5179.80000109.2S36 T69 F75S36-S73 PolarHBondContact OG-OG 3.35Å; T69-S73 WeakPolarHBondContact O-CA 3.32Å; T69-S73 WeakPolarHBondContact O-CB 3.48Å; T69-S73 PolarHBondContact O-N 2.86Å; S73-F75 PolarHBondContact OG-O 3.08Å
74R88.9Confident92.9Very high98 Ų9874.4 Ų74.437%0.3735%0.352SS..SBendtrans-85.3-21.5176.4-58.9-55.5-168.5174.95.5112.1S36 F72S36-R74 PolarHBondContact OG-N 2.95Å; F72-R74 PolarHBondContact O-N 2.89Å; F72-R74 VanDerWaalsContact O-N 3.16Å
75F89.2Confident92.7Very high1 Ų170.8 Ų70.80%0.00434%0.335CS..  trans-130.4119.1-177.8-42.4-71.8000110.4S36 S73 T80 I81 V84 A102 I135 R139S36-F75 WeakPolarHBondContact CB-O 3.49Å; S36-F75 PolarHBondContact OG-N 2.86Å; S36-F75 VanDerWaalsContact OG-N 3.07Å; S36-F75 PolarHBondContact OG-O 3.31Å; S73-F75 PolarHBondContact OG-O 3.08Å; F75-T80 HydrophobicContact CD1-CG2 4.02Å; F75-I81 HydrophobicContact CB-CD1 4.49Å; F75-I81 HydrophobicContact CB-CG1 3.59Å; F75-V84 HydrophobicContact CD1-CG2 4.16Å; F75-V84 HydrophobicContact CE1-CG2 3.76Å; F75-V84 HydrophobicContact CE2-CG1 4.06Å; F75-V84 HydrophobicContact CE2-CG2 4.35Å; F75-V84 HydrophobicContact CZ-CB 4.44Å; F75-V84 HydrophobicContact CZ-CG1 3.99Å; F75-V84 HydrophobicContact CZ-CG2 3.88Å; F75-A102 HydrophobicContact CE2-CB 4.45Å; F75-A102 WeakPolarHBondContact CE2-O 3.3Å; F75-I135 HydrophobicContact CZ-CG2 4.02Å; F75-R139 HydrophobicContact CE1-CB 4.15Å
76K84.6Confident92.5Very high155 Ų15571.3 Ų71.367%0.67434%0.342SS*.  trans-91.2-32.6177.4-58.8-179-178.2175.70112.9
77N86.8Confident92.4Very high71 Ų7172.1 Ų72.138%0.3835%0.346SS..  trans-85.9127.3179.6-174.9-13.5000111.8E79 T80 I81N77-E79 VanDerWaalsContact C-N 3.28Å; N77-E79 PolarHBondContact O-N 3.43Å; N77-E79 WeakPolarHBondContact OD1-CB 3.45Å; N77-E79 PolarHBondContact OD1-N 2.8Å; N77-T80 WeakPolarHBondContact O-CB 3.13Å; N77-T80 PolarHBondContact O-N 3.42Å; N77-T80 VanDerWaalsContact O-N 3.14Å; N77-I81 WeakPolarHBondContact O-CG1 3.34Å; N77-I81 PolarHBondContact O-N 3.16Å
78R89.3Confident92.3Very high188 Ų18867.1 Ų67.171%0.70932%0.319SS*.Hα-helixtrans-51.8-42.2174-168.9-179.4177.7177.4-1.6113.3M40 T80 I81 A82M40-R78 HydrophobicContact CE-CB 3.74Å; M40-R78 HydrophobicContact CE-CG 3.88Å; M40-R78 HydrophobicContact SD-CB 4.05Å; M40-R78 HydrophobicContact SD-CG 4.2Å; R78-T80 VanDerWaalsContact C-N 3.35Å; R78-I81 PolarHBondContact O-N 3.27Å; R78-A82 WeakPolarHBondContact O-CB 3.45Å; R78-A82 PolarHBondContact O-N 3.25Å
79E91.4Very high92Very high149 Ų14967.1 Ų67.170%0.69633%0.327SS*.Hα-helixtrans-65.5-40.9-179.6-64.9177.1169.700111.1N77 A82 S83N77-E79 VanDerWaalsContact C-N 3.28Å; N77-E79 PolarHBondContact O-N 3.43Å; N77-E79 WeakPolarHBondContact OD1-CB 3.45Å; N77-E79 PolarHBondContact OD1-N 2.8Å; E79-A82 PolarHBondContact O-N 3.22Å; E79-S83 VanDerWaalsContact O-CB 3.3Å; E79-S83 WeakPolarHBondContact O-CB 3.39Å; E79-S83 PolarHBondContact O-N 3.05Å
80T91.6Very high91.8Very high22 Ų2274.8 Ų74.814%0.13536%0.362CS..Hα-helixtrans-67.6-41.5175.7-48.50000111.5F75 N77 R78 A82 S83 V84 K138 Q142F75-T80 HydrophobicContact CD1-CG2 4.02Å; N77-T80 WeakPolarHBondContact O-CB 3.13Å; N77-T80 PolarHBondContact O-N 3.42Å; N77-T80 VanDerWaalsContact O-N 3.14Å; R78-T80 VanDerWaalsContact C-N 3.35Å; T80-A82 VanDerWaalsContact C-N 3.31Å; T80-A82 PolarHBondContact O-N 3.09Å; T80-S83 CarbonylContact O-C 3.59Å; T80-S83 PolarHBondContact O-N 3.1Å; T80-S83 VanDerWaalsContact O-N 3.14Å; T80-V84 HydrophobicContact CG2-CG2 4.24Å; T80-V84 WeakPolarHBondContact O-CG2 3.37Å; T80-V84 PolarHBondContact O-N 3.46Å; T80-K138 HydrophobicContact CG2-CB 3.94Å; T80-K138 WeakPolarHBondContact CG2-O 3.41Å; T80-Q142 HydrophobicContact CG2-CG 4.41Å; T80-Q142 PolarHBondContact OG1-NE2 3.3Å
81I92.3Very high91.8Very high8 Ų875.5 Ų75.54%0.04136%0.357CS..Hα-helixtrans-56.2-49.7175.1-66.6163.3000109.6L34 E37 M40 F75 N77 R78 S83 V84 R85L34-I81 HydrophobicContact CD1-CG2 4.39Å; E37-I81 HydrophobicContact CG-CG2 3.46Å; E37-I81 VanDerWaalsContact CG-CG2 3.46Å; M40-I81 HydrophobicContact CG-CD1 4.28Å; M40-I81 HydrophobicContact SD-CD1 3.5Å; M40-I81 WeakPolarHBondContact SD-CD1 3.45Å; F75-I81 HydrophobicContact CB-CD1 4.49Å; F75-I81 HydrophobicContact CB-CG1 3.59Å; N77-I81 WeakPolarHBondContact O-CG1 3.34Å; N77-I81 PolarHBondContact O-N 3.16Å; R78-I81 PolarHBondContact O-N 3.27Å; I81-S83 VanDerWaalsContact C-N 3.31Å; I81-S83 PolarHBondContact O-N 2.91Å; I81-V84 PolarHBondContact O-N 3.02Å; I81-R85 WeakPolarHBondContact O-CB 3.22Å; I81-R85 PolarHBondContact O-N 3.35Å
82A93.1Very high91.7Very high51 Ų5174.4 Ų74.442%0.42136%0.358SS..Hα-helixtrans-61.8-38.9177.400000112.2R78 E79 T80 S86R78-A82 WeakPolarHBondContact O-CB 3.45Å; R78-A82 PolarHBondContact O-N 3.25Å; E79-A82 PolarHBondContact O-N 3.22Å; T80-A82 VanDerWaalsContact C-N 3.31Å; T80-A82 PolarHBondContact O-N 3.09Å; A82-S86 VanDerWaalsContact O-CB 3.3Å; A82-S86 WeakPolarHBondContact O-CB 3.3Å; A82-S86 PolarHBondContact O-N 3.48Å; A82-S86 PolarHBondContact O-OG 2.91Å
83S93.3Very high91.6Very high50 Ų5072 Ų7235%0.3535%0.348SS..Hα-helixtrans-69.1-38.7178.1-173.70000113.1E79 T80 I81 L87 K138E79-S83 VanDerWaalsContact O-CB 3.3Å; E79-S83 WeakPolarHBondContact O-CB 3.39Å; E79-S83 PolarHBondContact O-N 3.05Å; T80-S83 CarbonylContact O-C 3.59Å; T80-S83 PolarHBondContact O-N 3.1Å; T80-S83 VanDerWaalsContact O-N 3.14Å; I81-S83 VanDerWaalsContact C-N 3.31Å; I81-S83 PolarHBondContact O-N 2.91Å; S83-L87 WeakPolarHBondContact O-CB 3.12Å; S83-L87 PolarHBondContact O-N 3.38Å; S83-K138 PolarHBondContact O-NZ 3.43Å; S83-K138 WeakPolarHBondContact OG-CE 3.46Å; S83-K138 PolarHBondContact OG-NZ 3.15Å
84V93.8Very high91.8Very high0 Ų074.3 Ų74.30%036%0.357CS..Hα-helixtrans-67.8-45.4174171.60000109.8F75 T80 I81 S86 L87 L88 A102 K138F75-V84 HydrophobicContact CD1-CG2 4.16Å; F75-V84 HydrophobicContact CE1-CG2 3.76Å; F75-V84 HydrophobicContact CE2-CG1 4.06Å; F75-V84 HydrophobicContact CE2-CG2 4.35Å; F75-V84 HydrophobicContact CZ-CB 4.44Å; F75-V84 HydrophobicContact CZ-CG1 3.99Å; F75-V84 HydrophobicContact CZ-CG2 3.88Å; T80-V84 HydrophobicContact CG2-CG2 4.24Å; T80-V84 WeakPolarHBondContact O-CG2 3.37Å; T80-V84 PolarHBondContact O-N 3.46Å; I81-V84 PolarHBondContact O-N 3.02Å; V84-S86 VanDerWaalsContact C-N 3.35Å; V84-S86 PolarHBondContact O-N 2.7Å; V84-L87 WeakPolarHBondContact O-CB 3.39Å; V84-L87 PolarHBondContact O-N 2.95Å; V84-L88 HydrophobicContact CG1-CD1 4.01Å; V84-L88 PolarHBondContact O-N 3.26Å; V84-A102 HydrophobicContact CG1-CB 4.21Å; V84-K138 HydrophobicContact CG2-CB 3.84Å; V84-K138 HydrophobicContact CG2-CD 3.64Å; V84-K138 HydrophobicContact CG2-CG 4.38Å
85R93.9Very high92Very high51 Ų5173.5 Ų73.519%0.19236%0.356CS..Hα-helixtrans-59.1-47.4176.2-166.8179.2-168.690.92.2111.1T32 E37 I81 L87 L88 L89T32-R85 PolarHBondContact O-NH1 2.86Å; T32-R85 PolarHBondContact O-NH2 2.78Å; E37-R85 WeakPolarHBondContact OE1-CD 3.14Å; E37-R85 IonicContact OE1-CZ 3.05Å; E37-R85 IonicContact OE1-NE 3.82Å; E37-R85 IonicContact OE1-NH1 2.61Å; E37-R85 PolarHBondContact OE1-NH1 2.92Å; E37-R85 IonicContact OE2-CZ 2.85Å; E37-R85 IonicContact OE2-NH1 3.32Å; E37-R85 PolarHBondContact OE2-NH1 3.13Å; I81-R85 WeakPolarHBondContact O-CB 3.22Å; I81-R85 PolarHBondContact O-N 3.35Å; R85-L87 PolarHBondContact O-N 3.22Å; R85-L88 PolarHBondContact O-N 2.93Å; R85-L89 VanDerWaalsContact O-CB 3.24Å; R85-L89 WeakPolarHBondContact O-CB 3.31Å; R85-L89 PolarHBondContact O-N 3.12Å
86S94.4Very high92.4Very high65 Ų6576.4 Ų76.446%0.45537%0.368SS..Hα-helixtrans-62.2-41.5179.5-58.80000112.4A82 V84 L88 L89 Q90A82-S86 VanDerWaalsContact O-CB 3.3Å; A82-S86 WeakPolarHBondContact O-CB 3.3Å; A82-S86 PolarHBondContact O-N 3.48Å; A82-S86 PolarHBondContact O-OG 2.91Å; V84-S86 VanDerWaalsContact C-N 3.35Å; V84-S86 PolarHBondContact O-N 2.7Å; S86-L88 PolarHBondContact O-N 2.85Å; S86-L89 PolarHBondContact O-N 2.99Å; S86-Q90 WeakPolarHBondContact O-CG 3.37Å; S86-Q90 PolarHBondContact O-N 3.47Å
87L94Very high92.9Very high24 Ų2469 Ų6913%0.12634%0.336CS..Hα-helixtrans-57.8-48.6175.4172.270.5000111.4S83 V84 R85 D134 I135S83-L87 WeakPolarHBondContact O-CB 3.12Å; S83-L87 PolarHBondContact O-N 3.38Å; V84-L87 WeakPolarHBondContact O-CB 3.39Å; V84-L87 PolarHBondContact O-N 2.95Å; R85-L87 PolarHBondContact O-N 3.22Å; L87-D134 HydrophobicContact CD1-CB 4.5Å; L87-D134 HydrophobicContact CD2-CB 3.62Å; L87-I135 HydrophobicContact CD2-CG1 4.45Å
88L93.4Very high93.3Very high1 Ų166 Ų661%0.00532%0.321CS..Hα-helixtrans-77.3-29.5-176.7-63.7170000113V84 R85 S86 Q90 K91 L93 L98 A102 I131 I135V84-L88 HydrophobicContact CG1-CD1 4.01Å; V84-L88 PolarHBondContact O-N 3.26Å; R85-L88 PolarHBondContact O-N 2.93Å; S86-L88 PolarHBondContact O-N 2.85Å; L88-Q90 PolarHBondContact O-N 3.05Å; L88-K91 WeakPolarHBondContact O-CB 3.38Å; L88-K91 PolarHBondContact O-N 3.43Å; L88-L93 HydrophobicContact CB-CD1 4.39Å; L88-L93 HydrophobicContact CD2-CD1 3.98Å; L88-L98 HydrophobicContact CB-CD1 3.57Å; L88-L98 HydrophobicContact CB-CD2 4.49Å; L88-L98 HydrophobicContact CB-CG 3.55Å; L88-L98 HydrophobicContact CD1-CG 4.09Å; L88-L98 HydrophobicContact CG-CG 4.45Å; L88-A102 HydrophobicContact CD1-CB 3.87Å; L88-I131 HydrophobicContact CD2-CG2 3.6Å; L88-I135 HydrophobicContact CD1-CD1 4.33Å; L88-I135 HydrophobicContact CD2-CD1 3.97Å; L88-I135 HydrophobicContact CD2-CG1 4.44Å
89L92.8Very high93.6Very high126 Ų12657.5 Ų57.566%0.6629%0.29SS*.Hα-helixtrans-67.4-26.2176.9-158.879.6000112.2R85 S86 K91 L98R85-L89 VanDerWaalsContact O-CB 3.24Å; R85-L89 WeakPolarHBondContact O-CB 3.31Å; R85-L89 PolarHBondContact O-N 3.12Å; S86-L89 PolarHBondContact O-N 2.99Å; L89-K91 PolarHBondContact O-N 3.4Å; L89-L98 HydrophobicContact CD1-CD1 4.27Å
90Q92.5Very high93.8Very high164 Ų16451.2 Ų51.277%0.76626%0.263SS*.THydrogen-bonded Turntrans-74-12.2173.3-71.7174.7-13.200112.8S86 L88S86-Q90 WeakPolarHBondContact O-CG 3.37Å; S86-Q90 PolarHBondContact O-N 3.47Å; L88-Q90 PolarHBondContact O-N 3.05Å
91K92.6Very high94Very high60 Ų6050.2 Ų50.226%0.26126%0.257SS..SBendtrans-94.1152.4177.8-58.8-61.7-171.4163.50110.3L88 L89 L93 F123 E127 I131L88-K91 WeakPolarHBondContact O-CB 3.38Å; L88-K91 PolarHBondContact O-N 3.43Å; L89-K91 PolarHBondContact O-N 3.4Å; K91-L93 HydrophobicContact CB-CD1 4.01Å; K91-L93 HydrophobicContact CB-CG 4.15Å; K91-L93 PolarHBondContact O-N 2.91Å; K91-F123 HydrophobicContact CB-CE1 4.41Å; K91-F123 HydrophobicContact CB-CZ 4.18Å; K91-E127 IonicContact NZ-OE1 2.84Å; K91-E127 PolarHBondContact NZ-OE1 3.04Å; K91-I131 HydrophobicContact CD-CD1 3.85Å; K91-I131 HydrophobicContact CD-CG1 4.33Å; K91-I131 HydrophobicContact CG-CD1 3.91Å; K91-I131 HydrophobicContact CG-CG1 4.39Å
92K91.4Very high94.2Very high182 Ų18249.9 Ų49.979%0.79126%0.255SS*.SBendtrans-77.848.4179.7-65.5-177.2178.9176.60112.3R122K92-R122 PolarHBondContact O-NE 3.46Å; K92-R122 PolarHBondContact O-NH2 3.34Å
93L93.4Very high94.3Very high26 Ų2649 Ų4914%0.13624%0.243CC..  trans-90.7148.5178.8-71.9164.8000110.8L88 K91 E97 L98 L101 V119 F123L88-L93 HydrophobicContact CB-CD1 4.39Å; L88-L93 HydrophobicContact CD2-CD1 3.98Å; K91-L93 HydrophobicContact CB-CD1 4.01Å; K91-L93 HydrophobicContact CB-CG 4.15Å; K91-L93 PolarHBondContact O-N 2.91Å; L93-E97 HydrophobicContact CB-CB 4.44Å; L93-E97 HydrophobicContact CD2-CB 3.91Å; L93-L98 HydrophobicContact CB-CB 4.38Å; L93-L101 HydrophobicContact CD1-CD1 3.85Å; L93-L101 HydrophobicContact CD2-CD1 3.93Å; L93-V119 HydrophobicContact CD2-CG2 4.4Å; L93-F123 HydrophobicContact CD2-CE2 3.52Å; L93-F123 HydrophobicContact CD2-CZ 4.04Å; L93-F123 HydrophobicContact CG-CE2 3.99Å; L93-F123 HydrophobicContact CG-CZ 3.98Å
94H94.8Very high94.4Very high69 Ų6950.6 Ų50.632%0.31925%0.247SC..  trans-69.4151.7163-171.8-104.2000110.1L21 F23 F96 E97 L98L21-H94 HydrophobicContact CD1-CB 3.81Å; L21-H94 HydrophobicContact CD2-CB 4.21Å; F23-H94 AromaticContact CD2-CE1 3.98Å; F23-H94 AromaticContact CE2-CE1 3.67Å; H94-F96 WeakPolarHBondContact ND1-CB 3.49Å; H94-F96 PolarHBondContact ND1-N 3.49Å; H94-F96 PolarHBondContact O-N 2.85Å; H94-E97 HydrophobicContact CB-CG 4.07Å; H94-E97 PolarHBondContact N-OE2 2.89Å; H94-E97 PolarHBondContact O-N 2.74Å; H94-L98 PolarHBondContact O-N 3.04Å
95K94.4Very high94.4Very high80 Ų8050.8 Ų50.835%0.34825%0.249SC..Hα-helixtrans-54.6-39.9-179.6-66176.1173.7174.60112N29 A30 T32 A99N29-K95 PolarHBondContact O-NZ 3.3Å; A30-K95 WeakPolarHBondContact O-CD 3.34Å; A30-K95 PolarHBondContact O-NZ 3.23Å; T32-K95 HydrophobicContact CG2-CB 3.94Å; T32-K95 PolarHBondContact OG1-O 3.46Å; T32-K95 VanDerWaalsContact OG1-O 3.05Å; K95-A99 PolarHBondContact O-N 3.43Å; K95-A99 VanDerWaalsContact O-N 3.1Å
96F95.7Very high94.5Very high62 Ų6248.5 Ų48.527%0.27224%0.24SC..Hα-helixtrans-61.1-46.9174.8177.1-102.1000113A18 L21 F23 H94 A99 S100A18-F96 HydrophobicContact CB-CE1 4.14Å; A18-F96 HydrophobicContact CB-CE2 4.32Å; A18-F96 HydrophobicContact CB-CZ 3.82Å; L21-F96 HydrophobicContact CD2-CB 4.38Å; L21-F96 HydrophobicContact CD2-CD1 3.91Å; F23-F96 HydrophobicContact CE1-CD2 4.12Å; F23-F96 HydrophobicContact CE1-CE2 4.49Å; F23-F96 HydrophobicContact CE1-CG 4.36Å; F23-F96 HydrophobicContact CE2-CB 4.02Å; F23-F96 HydrophobicContact CE2-CG 4.26Å; F23-F96 HydrophobicContact CZ-CB 3.73Å; F23-F96 AromaticContact CZ-CD1 3.95Å; F23-F96 HydrophobicContact CZ-CD1 3.95Å; F23-F96 AromaticContact CZ-CD2 3.72Å; F23-F96 HydrophobicContact CZ-CD2 3.72Å; F23-F96 HydrophobicContact CZ-CE2 4.31Å; F23-F96 AromaticContact CZ-CG 3.51Å; F23-F96 HydrophobicContact CZ-CG 3.51Å; H94-F96 WeakPolarHBondContact ND1-CB 3.49Å; H94-F96 PolarHBondContact ND1-N 3.49Å; H94-F96 PolarHBondContact O-N 2.85Å; F96-A99 PolarHBondContact O-N 3.1Å; F96-S100 VanDerWaalsContact O-CB 3.29Å; F96-S100 WeakPolarHBondContact O-CB 3.16Å; F96-S100 PolarHBondContact O-N 3.45Å; F96-S100 PolarHBondContact O-OG 3.07Å
97E95.8Very high94.5Very high0 Ų050.8 Ų50.80%024%0.244CC..Hα-helixtrans-65.7-42.2-179.4-62.1169.3154.600110.9L21 L93 H94 A99 S100 L101 I116 S118 V119 R122L21-E97 HydrophobicContact CD2-CG 4.09Å; L93-E97 HydrophobicContact CB-CB 4.44Å; L93-E97 HydrophobicContact CD2-CB 3.91Å; H94-E97 HydrophobicContact CB-CG 4.07Å; H94-E97 PolarHBondContact N-OE2 2.89Å; H94-E97 PolarHBondContact O-N 2.74Å; E97-A99 PolarHBondContact O-N 2.88Å; E97-S100 PolarHBondContact O-N 3.44Å; E97-L101 WeakPolarHBondContact O-CB 3.34Å; E97-L101 WeakPolarHBondContact O-CG 2.97Å; E97-L101 PolarHBondContact O-N 2.86Å; E97-I116 HydrophobicContact CG-CG2 4.09Å; E97-S118 VanDerWaalsContact CG-OG 3.31Å; E97-S118 WeakPolarHBondContact CG-OG 3.3Å; E97-S118 VanDerWaalsContact OE1-C 3.23Å; E97-S118 VanDerWaalsContact OE1-CB 3.3Å; E97-S118 WeakPolarHBondContact OE1-CB 3.49Å; E97-S118 VanDerWaalsContact OE1-O 3.1Å; E97-S118 PolarHBondContact OE1-OG 3.5Å; E97-V119 HydrophobicContact CB-CG2 4.01Å; E97-V119 HydrophobicContact CG-CG2 3.87Å; E97-R122 VanDerWaalsContact OE1-CD 3.32Å; E97-R122 WeakPolarHBondContact OE1-CD 3.29Å; E97-R122 IonicContact OE1-CZ 3.98Å; E97-R122 IonicContact OE1-NE 3.62Å; E97-R122 IonicContact OE1-NH1 3.06Å; E97-R122 PolarHBondContact OE1-NH1 2.87Å; E97-R122 IonicContact OE2-CZ 3.74Å; E97-R122 IonicContact OE2-NE 2.82Å; E97-R122 PolarHBondContact OE2-NE 2.98Å; E97-R122 IonicContact OE2-NH1 3.83Å; E97-R122 PolarHBondContact OE2-NH1 2.89Å; E97-R122 IonicContact OE2-NH2 3.65Å
98L95.4Very high94.6Very high9 Ų951.5 Ų51.55%0.04725%0.253CS..Hα-helixtrans-55.1-51.9175.2178155.2000111.1L34 L88 L89 L93 H94 S100 A102L34-L98 HydrophobicContact CD2-CD2 4.36Å; L88-L98 HydrophobicContact CB-CD1 3.57Å; L88-L98 HydrophobicContact CB-CD2 4.49Å; L88-L98 HydrophobicContact CB-CG 3.55Å; L88-L98 HydrophobicContact CD1-CG 4.09Å; L88-L98 HydrophobicContact CG-CG 4.45Å; L89-L98 HydrophobicContact CD1-CD1 4.27Å; L93-L98 HydrophobicContact CB-CB 4.38Å; H94-L98 PolarHBondContact O-N 3.04Å; L98-S100 VanDerWaalsContact C-N 3.33Å; L98-S100 PolarHBondContact O-N 2.8Å; L98-A102 WeakPolarHBondContact O-CB 3.4Å; L98-A102 PolarHBondContact O-N 2.83Å; L98-A102 VanDerWaalsContact O-N 3.13Å
99A95.7Very high94.7Very high8 Ų851.8 Ų51.87%0.06626%0.255CS..Hα-helixtrans-66.2-38.3179.900000111.9T32 L34 K95 F96 E97 A102 N103T32-A99 HydrophobicContact CG2-CB 4.24Å; L34-A99 HydrophobicContact CD2-CB 4.12Å; K95-A99 PolarHBondContact O-N 3.43Å; K95-A99 VanDerWaalsContact O-N 3.1Å; F96-A99 PolarHBondContact O-N 3.1Å; E97-A99 PolarHBondContact O-N 2.88Å; A99-A102 PolarHBondContact O-N 2.91Å; A99-N103 VanDerWaalsContact O-CB 3.26Å; A99-N103 WeakPolarHBondContact O-CB 3.48Å; A99-N103 PolarHBondContact O-N 3.07Å; A99-N103 PolarHBondContact O-ND2 3.36Å; A99-N103 VanDerWaalsContact O-ND2 3.15Å
100S96.2Very high94.8Very high18 Ų1853.3 Ų53.313%0.12626%0.259CS..Hα-helixtrans-65.4-46.5179.3-61.50000111.7F96 E97 L98 A102 N103 L104 I116F96-S100 VanDerWaalsContact O-CB 3.29Å; F96-S100 WeakPolarHBondContact O-CB 3.16Å; F96-S100 PolarHBondContact O-N 3.45Å; F96-S100 PolarHBondContact O-OG 3.07Å; E97-S100 PolarHBondContact O-N 3.44Å; L98-S100 VanDerWaalsContact C-N 3.33Å; L98-S100 PolarHBondContact O-N 2.8Å; S100-A102 PolarHBondContact O-N 2.89Å; S100-N103 PolarHBondContact O-N 3.44Å; S100-L104 VanDerWaalsContact O-CB 3.28Å; S100-L104 WeakPolarHBondContact O-CB 3.34Å; S100-L104 VanDerWaalsContact O-CG 3.29Å; S100-L104 WeakPolarHBondContact O-CG 3.44Å; S100-L104 PolarHBondContact O-N 3.31Å; S100-I116 VanDerWaalsContact CB-CD1 3.48Å
101L95.8Very high95Very high1 Ų149.5 Ų49.51%0.00524%0.241CC..Hα-helixtrans-60.3-45.2175.9-73.3171.5000111.8L93 E97 N103 C105 P106 A112 I116 L132 I135L93-L101 HydrophobicContact CD1-CD1 3.85Å; L93-L101 HydrophobicContact CD2-CD1 3.93Å; E97-L101 WeakPolarHBondContact O-CB 3.34Å; E97-L101 WeakPolarHBondContact O-CG 2.97Å; E97-L101 PolarHBondContact O-N 2.86Å; L101-N103 PolarHBondContact O-N 3.48Å; L101-C105 WeakPolarHBondContact O-CA 3.41Å; L101-C105 PolarHBondContact O-N 3.35Å; L101-P106 HydrophobicContact CD2-CG 4.03Å; L101-A112 HydrophobicContact CD2-CB 4.16Å; L101-I116 HydrophobicContact CD2-CD1 3.68Å; L101-I116 HydrophobicContact CG-CD1 3.74Å; L101-L132 HydrophobicContact CD2-CD2 3.99Å; L101-I135 HydrophobicContact CB-CD1 4.5Å
102A95.4Very high95.2Very high0 Ų046.6 Ų46.60%023%0.229CC..Hα-helixtrans-69.3-30.6179.900000113.5L34 F75 V84 L88 L98 A99 S100 C105L34-A102 HydrophobicContact CD1-CB 4.06Å; L34-A102 HydrophobicContact CD2-CB 3.55Å; L34-A102 HydrophobicContact CG-CB 4.43Å; F75-A102 HydrophobicContact CE2-CB 4.45Å; F75-A102 WeakPolarHBondContact CE2-O 3.3Å; V84-A102 HydrophobicContact CG1-CB 4.21Å; L88-A102 HydrophobicContact CD1-CB 3.87Å; L98-A102 WeakPolarHBondContact O-CB 3.4Å; L98-A102 PolarHBondContact O-N 2.83Å; L98-A102 VanDerWaalsContact O-N 3.13Å; A99-A102 PolarHBondContact O-N 2.91Å; S100-A102 PolarHBondContact O-N 2.89Å; A102-C105 PolarHBondContact O-SG 3.15Å
103N95.7Very high95.4Very high32 Ų3239.7 Ų39.717%0.17120%0.199CC..Hα-helixtrans-83.2-42.1179.4-73.5-26.6000112.6N35 A99 S100 L101N35-N103 PolarHBondContact N-OD1 3.4Å; A99-N103 VanDerWaalsContact O-CB 3.26Å; A99-N103 WeakPolarHBondContact O-CB 3.48Å; A99-N103 PolarHBondContact O-N 3.07Å; A99-N103 PolarHBondContact O-ND2 3.36Å; A99-N103 VanDerWaalsContact O-ND2 3.15Å; S100-N103 PolarHBondContact O-N 3.44Å; L101-N103 PolarHBondContact O-N 3.48Å
104L95.3Very high95.5Very high84 Ų8442.2 Ų42.244%0.4422%0.224SC..Hα-helixtrans-79.1-38.5-177.8-63.1174.6000111.5S100 L115 I116S100-L104 VanDerWaalsContact O-CB 3.28Å; S100-L104 WeakPolarHBondContact O-CB 3.34Å; S100-L104 VanDerWaalsContact O-CG 3.29Å; S100-L104 WeakPolarHBondContact O-CG 3.44Å; S100-L104 PolarHBondContact O-N 3.31Å; L104-L115 HydrophobicContact CD1-CB 4.24Å; L104-L115 HydrophobicContact CD1-CD1 4.29Å; L104-I116 HydrophobicContact CD1-CG1 4.4Å
105C94Very high95.6Very high5 Ų543.2 Ų43.23%0.03423%0.231CC..  trans5060.3-174.2-58.40000113.1L101 A102L101-C105 WeakPolarHBondContact O-CA 3.41Å; L101-C105 PolarHBondContact O-N 3.35Å; A102-C105 PolarHBondContact O-SG 3.15Å
106P95.6Very high95.7Very high2 Ų239.6 Ų39.61%0.01322%0.215CC..  trans-60.8153174.626.9-31.6000110.8L101 E111 A112 L115 L132L101-P106 HydrophobicContact CD2-CG 4.03Å; P106-E111 WeakPolarHBondContact CA-OE2 3.45Å; P106-E111 HydrophobicContact CB-CB 4.2Å; P106-E111 HydrophobicContact CB-CG 3.91Å; P106-A112 HydrophobicContact CB-CB 4.08Å; P106-A112 HydrophobicContact CG-CB 3.64Å; P106-L115 HydrophobicContact CB-CD1 4.39Å; P106-L132 HydrophobicContact CG-CD1 4.31Å; P106-L132 HydrophobicContact CG-CD2 3.73Å
107E94.2Very high95.7Very high113 Ų11339.4 Ų39.453%0.52822%0.22SC..SBendtrans-102.1-20.2-173.4-46.9-155144.700113E111 Q129 Q136 R139E107-E111 PolarHBondContact N-OE2 3.2Å; E107-Q129 PolarHBondContact O-NE2 2.92Å; E107-Q136 VanDerWaalsContact CA-NE2 3.25Å; E107-R139 IonicContact OE1-NH2 2.88Å; E107-R139 PolarHBondContact OE1-NH2 2.86Å
108A96Very high95.6Very high39 Ų3940.3 Ų40.332%0.32223%0.226SC..SBendtrans-126.1148176.800000111.8E110 E111 A112 L132A108-E110 PolarHBondContact O-N 3.33Å; A108-E111 HydrophobicContact CB-CB 4.31Å; A108-E111 WeakPolarHBondContact O-CB 3.39Å; A108-E111 PolarHBondContact O-N 3.45Å; A108-E111 VanDerWaalsContact O-N 3.1Å; A108-A112 PolarHBondContact O-N 2.99Å; A108-L132 VanDerWaalsContact C-CD1 3.47Å; A108-L132 WeakPolarHBondContact O-CD1 3.26Å
109A95.4Very high95.5Very high7 Ų740 Ų406%0.05823%0.225CC..Hα-helixtrans-55.7-39173.800000112.6A112 K113 D125 L128A109-A112 PolarHBondContact O-N 3.28Å; A109-K113 WeakPolarHBondContact O-CG 3.42Å; A109-K113 PolarHBondContact O-N 3.06Å; A109-D125 HydrophobicContact CB-CB 4.49Å; A109-L128 HydrophobicContact CB-CB 4.24Å; A109-L128 HydrophobicContact CB-CD2 4Å; A109-L128 HydrophobicContact CB-CG 4.11Å
110E95.7Very high95.2Very high159 Ų15946 Ų4674%0.74325%0.252SS*.Hα-helixtrans-61.5-44.9175.1-172.7-175.2-173.600111.7A108 A112 K113 A114A108-E110 PolarHBondContact O-N 3.33Å; E110-A112 PolarHBondContact O-N 3.01Å; E110-K113 PolarHBondContact O-N 2.84Å; E110-A114 WeakPolarHBondContact O-CB 3.34Å; E110-A114 PolarHBondContact O-N 3.39Å
111E97.1Very high94.9Very high83 Ų8348.9 Ų48.939%0.38828%0.283SS..Hα-helixtrans-62.8-43.2176.5-176.3-171.5-168.500111.1P106 E107 A108 K113 A114 L115P106-E111 WeakPolarHBondContact CA-OE2 3.45Å; P106-E111 HydrophobicContact CB-CB 4.2Å; P106-E111 HydrophobicContact CB-CG 3.91Å; E107-E111 PolarHBondContact N-OE2 3.2Å; A108-E111 HydrophobicContact CB-CB 4.31Å; A108-E111 WeakPolarHBondContact O-CB 3.39Å; A108-E111 PolarHBondContact O-N 3.45Å; A108-E111 VanDerWaalsContact O-N 3.1Å; E111-K113 VanDerWaalsContact C-N 3.32Å; E111-K113 PolarHBondContact O-N 2.91Å; E111-A114 PolarHBondContact O-N 3.48Å; E111-L115 HydrophobicContact CG-CD1 3.84Å; E111-L115 HydrophobicContact CG-CG 4.28Å; E111-L115 WeakPolarHBondContact O-CB 3.31Å; E111-L115 WeakPolarHBondContact O-CG 3.41Å; E111-L115 PolarHBondContact O-N 2.84Å
112A96.3Very high94.6Very high0 Ų053.3 Ų53.30%030%0.3CS..Hα-helixtrans-59.8-42.117800000112.2L101 P106 A108 A109 E110 I116 L128 L132L101-A112 HydrophobicContact CD2-CB 4.16Å; P106-A112 HydrophobicContact CB-CB 4.08Å; P106-A112 HydrophobicContact CG-CB 3.64Å; A108-A112 PolarHBondContact O-N 2.99Å; A109-A112 PolarHBondContact O-N 3.28Å; E110-A112 PolarHBondContact O-N 3.01Å; A112-I116 WeakPolarHBondContact O-CA 3.5Å; A112-I116 WeakPolarHBondContact O-CB 3.24Å; A112-I116 PolarHBondContact O-N 2.84Å; A112-L128 HydrophobicContact CB-CD2 4.13Å; A112-L132 HydrophobicContact CB-CD1 3.97Å; A112-L132 HydrophobicContact CB-CD2 4.48Å
113K95.5Very high94.5Very high37 Ų3754.4 Ų54.416%0.16131%0.305CS..Hα-helixtrans-67.7-39.5175.1-66.9170.3-174.5-179.90112.1A109 E110 E111 I116 P117 D125 L128A109-K113 WeakPolarHBondContact O-CG 3.42Å; A109-K113 PolarHBondContact O-N 3.06Å; E110-K113 PolarHBondContact O-N 2.84Å; E111-K113 VanDerWaalsContact C-N 3.32Å; E111-K113 PolarHBondContact O-N 2.91Å; K113-I116 CarbonylContact O-C 3.51Å; K113-I116 VanDerWaalsContact O-C 3.32Å; K113-P117 VanDerWaalsContact O-CA 3.31Å; K113-P117 WeakPolarHBondContact O-CA 3.37Å; K113-D125 IonicContact NZ-OD1 2.86Å; K113-D125 PolarHBondContact NZ-OD1 2.88Å; K113-D125 IonicContact NZ-OD2 2.59Å; K113-D125 PolarHBondContact NZ-OD2 3.25Å; K113-L128 HydrophobicContact CG-CD2 4.19Å
114A96.2Very high94.5Very high79 Ų7960 Ų6065%0.65333%0.33SS*.Hα-helixtrans-65.1-39.4177.800000112.4E110 E111E110-A114 WeakPolarHBondContact O-CB 3.34Å; E110-A114 PolarHBondContact O-N 3.39Å; E111-A114 PolarHBondContact O-N 3.48Å
115L96.3Very high94.4Very high89 Ų8959.9 Ų59.947%0.46633%0.33SS..Hα-helixtrans-80.6-32.3179.3-66.5176.4000113L104 P106 E111L104-L115 HydrophobicContact CD1-CB 4.24Å; L104-L115 HydrophobicContact CD1-CD1 4.29Å; P106-L115 HydrophobicContact CB-CD1 4.39Å; E111-L115 HydrophobicContact CG-CD1 3.84Å; E111-L115 HydrophobicContact CG-CG 4.28Å; E111-L115 WeakPolarHBondContact O-CB 3.31Å; E111-L115 WeakPolarHBondContact O-CG 3.41Å; E111-L115 PolarHBondContact O-N 2.84Å
116I96.2Very high94.5Very high5 Ų568 Ų683%0.02637%0.368CS..  trans-13179.8-177.1-46.3167.3000108.5E97 S100 L101 L104 A112 K113 S118 V119E97-I116 HydrophobicContact CG-CG2 4.09Å; S100-I116 VanDerWaalsContact CB-CD1 3.48Å; L101-I116 HydrophobicContact CD2-CD1 3.68Å; L101-I116 HydrophobicContact CG-CD1 3.74Å; L104-I116 HydrophobicContact CD1-CG1 4.4Å; A112-I116 WeakPolarHBondContact O-CA 3.5Å; A112-I116 WeakPolarHBondContact O-CB 3.24Å; A112-I116 PolarHBondContact O-N 2.84Å; K113-I116 CarbonylContact O-C 3.51Å; K113-I116 VanDerWaalsContact O-C 3.32Å; I116-S118 PolarHBondContact O-N 3.28Å; I116-S118 VanDerWaalsContact O-N 3.08Å; I116-V119 HydrophobicContact CB-CG2 4.05Å; I116-V119 HydrophobicContact CG2-CG2 3.65Å; I116-V119 WeakPolarHBondContact O-CB 3.3Å; I116-V119 PolarHBondContact O-N 3.45Å
117P95.3Very high94.5Very high57 Ų5771.7 Ų71.737%0.3739%0.385SS..G310 helixtrans-56.9-29.8-174.8-28.337.1000114K113 V119 E120K113-P117 VanDerWaalsContact O-CA 3.31Å; K113-P117 WeakPolarHBondContact O-CA 3.37Å; P117-V119 PolarHBondContact O-N 3.28Å; P117-V119 VanDerWaalsContact O-N 3.13Å; P117-E120 WeakPolarHBondContact O-CB 3.09Å; P117-E120 PolarHBondContact O-N 3.12Å
118S94.6Very high94.5Very high20 Ų2066.4 Ų66.414%0.1436%0.36CS..G310 helixtrans-63.7-18.3178.670.10000114.5S19 E97 I116 E120 R122S19-S118 WeakPolarHBondContact O-CB 3.45Å; S19-S118 PolarHBondContact O-N 3.13Å; E97-S118 VanDerWaalsContact CG-OG 3.31Å; E97-S118 WeakPolarHBondContact CG-OG 3.3Å; E97-S118 VanDerWaalsContact OE1-C 3.23Å; E97-S118 VanDerWaalsContact OE1-CB 3.3Å; E97-S118 WeakPolarHBondContact OE1-CB 3.49Å; E97-S118 VanDerWaalsContact OE1-O 3.1Å; E97-S118 PolarHBondContact OE1-OG 3.5Å; I116-S118 PolarHBondContact O-N 3.28Å; I116-S118 VanDerWaalsContact O-N 3.08Å; S118-E120 VanDerWaalsContact C-N 3.28Å; S118-R122 VanDerWaalsContact O-CD 3.28Å; S118-R122 WeakPolarHBondContact O-CD 3.39Å
119V92.3Very high94.6Very high1 Ų167.1 Ų67.11%0.00636%0.356CS..G310 helixtrans-77.3-17.5176.6175.50000111.5L93 E97 I116 P117 G121 R122 F123 L128L93-V119 HydrophobicContact CD2-CG2 4.4Å; E97-V119 HydrophobicContact CB-CG2 4.01Å; E97-V119 HydrophobicContact CG-CG2 3.87Å; I116-V119 HydrophobicContact CB-CG2 4.05Å; I116-V119 HydrophobicContact CG2-CG2 3.65Å; I116-V119 WeakPolarHBondContact O-CB 3.3Å; I116-V119 PolarHBondContact O-N 3.45Å; P117-V119 PolarHBondContact O-N 3.28Å; P117-V119 VanDerWaalsContact O-N 3.13Å; V119-G121 PolarHBondContact O-N 3.45Å; V119-R122 WeakPolarHBondContact O-CB 3.44Å; V119-R122 PolarHBondContact O-N 3.27Å; V119-R122 VanDerWaalsContact O-N 3.09Å; V119-F123 HydrophobicContact CG1-CD2 4.29Å; V119-L128 HydrophobicContact CG1-CD1 4.07Å; V119-L128 HydrophobicContact CG1-CD2 3.99Å
120E90.9Very high94.6Very high136 Ų13671.7 Ų71.764%0.63638%0.377SS*.THydrogen-bonded Turntrans-60.2131178.6-167.4164.1-159.400111.4P117 S118 R122P117-E120 WeakPolarHBondContact O-CB 3.09Å; P117-E120 PolarHBondContact O-N 3.12Å; S118-E120 VanDerWaalsContact C-N 3.28Å; E120-R122 PolarHBondContact O-N 2.86Å
121G88.4Confident94.6Very high77 Ų7764.3 Ų64.379%0.79434%0.342SS*.THydrogen-bonded Turntrans73.6-0.2-176.600000115.7V119V119-G121 PolarHBondContact O-N 3.45Å
122R91.1Very high94.5Very high95 Ų9560.4 Ų60.436%0.35832%0.324SS..THydrogen-bonded Turntrans-80.6-32.3175.2-62.4-172.982.2125.92.3113.6K92 E97 S118 V119 E120K92-R122 PolarHBondContact O-NE 3.46Å; K92-R122 PolarHBondContact O-NH2 3.34Å; E97-R122 VanDerWaalsContact OE1-CD 3.32Å; E97-R122 WeakPolarHBondContact OE1-CD 3.29Å; E97-R122 IonicContact OE1-CZ 3.98Å; E97-R122 IonicContact OE1-NE 3.62Å; E97-R122 IonicContact OE1-NH1 3.06Å; E97-R122 PolarHBondContact OE1-NH1 2.87Å; E97-R122 IonicContact OE2-CZ 3.74Å; E97-R122 IonicContact OE2-NE 2.82Å; E97-R122 PolarHBondContact OE2-NE 2.98Å; E97-R122 IonicContact OE2-NH1 3.83Å; E97-R122 PolarHBondContact OE2-NH1 2.89Å; E97-R122 IonicContact OE2-NH2 3.65Å; S118-R122 VanDerWaalsContact O-CD 3.28Å; S118-R122 WeakPolarHBondContact O-CD 3.39Å; V119-R122 WeakPolarHBondContact O-CB 3.44Å; V119-R122 PolarHBondContact O-N 3.27Å; V119-R122 VanDerWaalsContact O-N 3.09Å; E120-R122 PolarHBondContact O-N 2.86Å
123F92.9Very high94.5Very high23 Ų2363.3 Ų63.310%0.10134%0.339CS..SBendtrans-137.8152.8-178.4-56.3-80.5000109.5K91 L93 V119 E127 L128 I131K91-F123 HydrophobicContact CB-CE1 4.41Å; K91-F123 HydrophobicContact CB-CZ 4.18Å; L93-F123 HydrophobicContact CD2-CE2 3.52Å; L93-F123 HydrophobicContact CD2-CZ 4.04Å; L93-F123 HydrophobicContact CG-CE2 3.99Å; L93-F123 HydrophobicContact CG-CZ 3.98Å; V119-F123 HydrophobicContact CG1-CD2 4.29Å; F123-E127 HydrophobicContact CB-CB 4.46Å; F123-E127 HydrophobicContact CD1-CG 4.21Å; F123-L128 HydrophobicContact CB-CB 4.28Å; F123-I131 HydrophobicContact CD1-CD1 4.43Å; F123-I131 HydrophobicContact CE1-CD1 4.41Å
124E94.9Very high94.4Very high149 Ų14964.1 Ų64.170%0.69635%0.345SS*.  trans-67.6151.3164.4-63.4-62.5152.400110E126 E127 L128E124-E126 PolarHBondContact O-N 3.14Å; E124-E127 PolarHBondContact O-N 3.42Å; E124-L128 PolarHBondContact O-N 2.95Å
125D93.6Very high94.3Very high82 Ų8260.4 Ų60.444%0.43932%0.315SS..Hα-helixtrans-58.5-37.8-175.3-70.435.8000112.2A109 K113 L128 Q129A109-D125 HydrophobicContact CB-CB 4.49Å; K113-D125 IonicContact NZ-OD1 2.86Å; K113-D125 PolarHBondContact NZ-OD1 2.88Å; K113-D125 IonicContact NZ-OD2 2.59Å; K113-D125 PolarHBondContact NZ-OD2 3.25Å; D125-L128 PolarHBondContact O-N 2.8Å; D125-Q129 VanDerWaalsContact O-CB 3.28Å; D125-Q129 WeakPolarHBondContact O-CB 3.32Å; D125-Q129 PolarHBondContact O-N 3.4Å
126E95.4Very high94Very high176 Ų17658.5 Ų58.582%0.82230%0.303SS*.Hα-helixtrans-64.9-40.8175.9-64.2-177175.500112.1E124 Q130E124-E126 PolarHBondContact O-N 3.14Å; E126-Q130 WeakPolarHBondContact O-CB 3.47Å; E126-Q130 PolarHBondContact O-N 2.72Å
127E95.4Very high93.8Very high79 Ų7961.4 Ų61.437%0.36932%0.321SS..Hα-helixtrans-69.7-42.7177.4-177.5176.6-173.900110.9K91 F123 E124 Q129 Q130 I131K91-E127 IonicContact NZ-OE1 2.84Å; K91-E127 PolarHBondContact NZ-OE1 3.04Å; F123-E127 HydrophobicContact CB-CB 4.46Å; F123-E127 HydrophobicContact CD1-CG 4.21Å; E124-E127 PolarHBondContact O-N 3.42Å; E127-Q129 VanDerWaalsContact C-N 3.35Å; E127-Q130 PolarHBondContact O-N 3.43Å; E127-I131 HydrophobicContact CG-CD1 4.23Å; E127-I131 WeakPolarHBondContact O-CG1 3.43Å; E127-I131 PolarHBondContact O-N 2.98Å; E127-I131 VanDerWaalsContact O-N 3.08Å
128L95.4Very high93.5Very high2 Ų260.9 Ų60.91%0.0131%0.314CS..Hα-helixtrans-61.9-45.7177.2-177.555.9000110.5A109 A112 K113 V119 F123 E124 D125 Q130 I131 L132A109-L128 HydrophobicContact CB-CB 4.24Å; A109-L128 HydrophobicContact CB-CD2 4Å; A109-L128 HydrophobicContact CB-CG 4.11Å; A112-L128 HydrophobicContact CB-CD2 4.13Å; K113-L128 HydrophobicContact CG-CD2 4.19Å; V119-L128 HydrophobicContact CG1-CD1 4.07Å; V119-L128 HydrophobicContact CG1-CD2 3.99Å; F123-L128 HydrophobicContact CB-CB 4.28Å; E124-L128 PolarHBondContact O-N 2.95Å; D125-L128 PolarHBondContact O-N 2.8Å; L128-Q130 VanDerWaalsContact C-N 3.33Å; L128-Q130 PolarHBondContact O-N 2.99Å; L128-I131 WeakPolarHBondContact O-CB 3.39Å; L128-I131 PolarHBondContact O-N 3.36Å; L128-I131 VanDerWaalsContact O-N 3.15Å; L128-L132 WeakPolarHBondContact O-CG 2.93Å; L128-L132 PolarHBondContact O-N 3.32Å
129Q96.7Very high93.1Very high53 Ų5362.3 Ų62.325%0.24832%0.316CS..Hα-helixtrans-59-44.6177.1-169.96250.600111.5E107 D125 E127 I131 L132 D133E107-Q129 PolarHBondContact O-NE2 2.92Å; D125-Q129 VanDerWaalsContact O-CB 3.28Å; D125-Q129 WeakPolarHBondContact O-CB 3.32Å; D125-Q129 PolarHBondContact O-N 3.4Å; E127-Q129 VanDerWaalsContact C-N 3.35Å; Q129-I131 VanDerWaalsContact C-N 3.29Å; Q129-I131 PolarHBondContact O-N 2.98Å; Q129-L132 WeakPolarHBondContact O-CB 3.49Å; Q129-L132 PolarHBondContact O-N 2.84Å; Q129-L132 VanDerWaalsContact O-N 3.09Å; Q129-D133 PolarHBondContact NE2-OD1 2.72Å; Q129-D133 PolarHBondContact O-N 3.14Å
130Q96.3Very high92.4Very high104 Ų10465.6 Ų65.649%0.48634%0.339SS..Hα-helixtrans-58.9-40176.7-175.162.362.200112.4E126 E127 L128 L132 D133 D134E126-Q130 WeakPolarHBondContact O-CB 3.47Å; E126-Q130 PolarHBondContact O-N 2.72Å; E127-Q130 PolarHBondContact O-N 3.43Å; L128-Q130 VanDerWaalsContact C-N 3.33Å; L128-Q130 PolarHBondContact O-N 2.99Å; Q130-L132 VanDerWaalsContact C-N 3.34Å; Q130-D133 PolarHBondContact O-N 3.24Å; Q130-D134 PolarHBondContact NE2-OD1 3.39Å; Q130-D134 WeakPolarHBondContact O-CB 3.41Å; Q130-D134 PolarHBondContact O-N 3.38Å
131I95.3Very high91.6Very high3 Ų367 Ų672%0.01534%0.343CS..Hα-helixtrans-62.9-42.8176.2-66.9164.7000110.8L88 K91 F123 E127 L128 Q129 D134 I135L88-I131 HydrophobicContact CD2-CG2 3.6Å; K91-I131 HydrophobicContact CD-CD1 3.85Å; K91-I131 HydrophobicContact CD-CG1 4.33Å; K91-I131 HydrophobicContact CG-CD1 3.91Å; K91-I131 HydrophobicContact CG-CG1 4.39Å; F123-I131 HydrophobicContact CD1-CD1 4.43Å; F123-I131 HydrophobicContact CE1-CD1 4.41Å; E127-I131 HydrophobicContact CG-CD1 4.23Å; E127-I131 WeakPolarHBondContact O-CG1 3.43Å; E127-I131 PolarHBondContact O-N 2.98Å; E127-I131 VanDerWaalsContact O-N 3.08Å; L128-I131 WeakPolarHBondContact O-CB 3.39Å; L128-I131 PolarHBondContact O-N 3.36Å; L128-I131 VanDerWaalsContact O-N 3.15Å; Q129-I131 VanDerWaalsContact C-N 3.29Å; Q129-I131 PolarHBondContact O-N 2.98Å; I131-D134 PolarHBondContact O-N 2.95Å; I131-I135 HydrophobicContact CG2-CD1 4.19Å; I131-I135 WeakPolarHBondContact O-CG1 3.18Å; I131-I135 PolarHBondContact O-N 3.48Å; I131-I135 VanDerWaalsContact O-N 3.08Å
132L95.8Very high90.4Very high1 Ų165.3 Ų65.31%0.00532%0.315CS..Hα-helixtrans-64.8-44.3178.2-61.3-179.4000111.3L101 P106 A108 A112 L128 Q129 Q130 D134 I135 Q136L101-L132 HydrophobicContact CD2-CD2 3.99Å; P106-L132 HydrophobicContact CG-CD1 4.31Å; P106-L132 HydrophobicContact CG-CD2 3.73Å; A108-L132 VanDerWaalsContact C-CD1 3.47Å; A108-L132 WeakPolarHBondContact O-CD1 3.26Å; A112-L132 HydrophobicContact CB-CD1 3.97Å; A112-L132 HydrophobicContact CB-CD2 4.48Å; L128-L132 WeakPolarHBondContact O-CG 2.93Å; L128-L132 PolarHBondContact O-N 3.32Å; Q129-L132 WeakPolarHBondContact O-CB 3.49Å; Q129-L132 PolarHBondContact O-N 2.84Å; Q129-L132 VanDerWaalsContact O-N 3.09Å; Q130-L132 VanDerWaalsContact C-N 3.34Å; L132-D134 VanDerWaalsContact C-N 3.31Å; L132-D134 PolarHBondContact O-N 3.26Å; L132-I135 HydrophobicContact CD2-CD1 4.38Å; L132-I135 WeakPolarHBondContact O-CB 3.48Å; L132-I135 PolarHBondContact O-N 3.2Å; L132-I135 VanDerWaalsContact O-N 3.13Å; L132-Q136 WeakPolarHBondContact O-CG 3.37Å; L132-Q136 PolarHBondContact O-N 2.88Å
133D95.7Very high88.6Confident61 Ų6172.3 Ų72.333%0.32634%0.343SS..Hα-helixtrans-61.7-39.7178.2-65.5-11.9000111.3Q129 Q130 Q136 T137Q129-D133 PolarHBondContact NE2-OD1 2.72Å; Q129-D133 PolarHBondContact O-N 3.14Å; Q130-D133 PolarHBondContact O-N 3.24Å; D133-Q136 PolarHBondContact O-N 3.3Å; D133-T137 VanDerWaalsContact O-CB 3.29Å; D133-T137 WeakPolarHBondContact O-CB 3.5Å; D133-T137 PolarHBondContact O-N 3.29Å; D133-T137 PolarHBondContact O-OG1 2.98Å
134D94.3Very high88.3Confident54 Ų5474.8 Ų74.829%0.28936%0.355SS..Hα-helixtrans-64.8-39.6175-71.8-12.5000111.9L87 Q130 I131 L132 K138L87-D134 HydrophobicContact CD1-CB 4.5Å; L87-D134 HydrophobicContact CD2-CB 3.62Å; Q130-D134 PolarHBondContact NE2-OD1 3.39Å; Q130-D134 WeakPolarHBondContact O-CB 3.41Å; Q130-D134 PolarHBondContact O-N 3.38Å; I131-D134 PolarHBondContact O-N 2.95Å; L132-D134 VanDerWaalsContact C-N 3.31Å; L132-D134 PolarHBondContact O-N 3.26Å; D134-K138 PolarHBondContact O-N 2.87Å; D134-K138 VanDerWaalsContact O-N 3.15Å
135I93Very high88Confident2 Ų270.8 Ų70.81%0.0134%0.337CS..Hα-helixtrans-63.7-47.3173.9-67.2161.7000110F75 L87 L88 L101 I131 L132 T137 K138 R139F75-I135 HydrophobicContact CZ-CG2 4.02Å; L87-I135 HydrophobicContact CD2-CG1 4.45Å; L88-I135 HydrophobicContact CD1-CD1 4.33Å; L88-I135 HydrophobicContact CD2-CD1 3.97Å; L88-I135 HydrophobicContact CD2-CG1 4.44Å; L101-I135 HydrophobicContact CB-CD1 4.5Å; I131-I135 HydrophobicContact CG2-CD1 4.19Å; I131-I135 WeakPolarHBondContact O-CG1 3.18Å; I131-I135 PolarHBondContact O-N 3.48Å; I131-I135 VanDerWaalsContact O-N 3.08Å; L132-I135 HydrophobicContact CD2-CD1 4.38Å; L132-I135 WeakPolarHBondContact O-CB 3.48Å; L132-I135 PolarHBondContact O-N 3.2Å; L132-I135 VanDerWaalsContact O-N 3.13Å; I135-T137 VanDerWaalsContact C-N 3.32Å; I135-T137 PolarHBondContact O-N 2.98Å; I135-K138 PolarHBondContact O-N 3.44Å; I135-R139 PolarHBondContact O-N 3.02Å
136Q91.5Very high87.7Confident48 Ų4870.2 Ų70.222%0.22433%0.331CS..Hα-helixtrans-62.7-40.4-179.7-73-162.1700112.4E107 L132 D133 K138 R139 S140E107-Q136 VanDerWaalsContact CA-NE2 3.25Å; L132-Q136 WeakPolarHBondContact O-CG 3.37Å; L132-Q136 PolarHBondContact O-N 2.88Å; D133-Q136 PolarHBondContact O-N 3.3Å; Q136-K138 VanDerWaalsContact C-N 3.3Å; Q136-K138 PolarHBondContact O-N 3.26Å; Q136-R139 WeakPolarHBondContact O-CA 3.43Å; Q136-R139 WeakPolarHBondContact O-CB 3.42Å; Q136-R139 PolarHBondContact O-N 3.38Å; Q136-R139 VanDerWaalsContact O-N 3.08Å; Q136-S140 PolarHBondContact O-N 3.19Å; Q136-S140 PolarHBondContact O-OG 3.11Å
137T91.8Very high87.2Confident66 Ų6664 Ų6441%0.40530%0.302SS..Hα-helixtrans-58-45.2174.7-65.60000110.5D133 I135 R139 S140 F141D133-T137 VanDerWaalsContact O-CB 3.29Å; D133-T137 WeakPolarHBondContact O-CB 3.5Å; D133-T137 PolarHBondContact O-N 3.29Å; D133-T137 PolarHBondContact O-OG1 2.98Å; I135-T137 VanDerWaalsContact C-N 3.32Å; I135-T137 PolarHBondContact O-N 2.98Å; T137-R139 VanDerWaalsContact C-N 3.3Å; T137-R139 PolarHBondContact O-N 3.38Å; T137-S140 PolarHBondContact O-N 3.36Å; T137-S140 PolarHBondContact O-OG 3.08Å; T137-F141 HydrophobicContact CG2-CD2 3.97Å; T137-F141 HydrophobicContact CG2-CE2 3.36Å; T137-F141 HydrophobicContact CG2-CZ 4.27Å; T137-F141 WeakPolarHBondContact O-CD2 3.4Å; T137-F141 PolarHBondContact O-N 3.42Å
138K88.6Confident86.7Confident47 Ų4763.1 Ų63.120%0.20430%0.298CS..Hα-helixtrans-67.5-29.1175.4-73.6-177.6-1741630113.6T80 S83 V84 D134 I135 Q136T80-K138 HydrophobicContact CG2-CB 3.94Å; T80-K138 WeakPolarHBondContact CG2-O 3.41Å; S83-K138 PolarHBondContact O-NZ 3.43Å; S83-K138 WeakPolarHBondContact OG-CE 3.46Å; S83-K138 PolarHBondContact OG-NZ 3.15Å; V84-K138 HydrophobicContact CG2-CB 3.84Å; V84-K138 HydrophobicContact CG2-CD 3.64Å; V84-K138 HydrophobicContact CG2-CG 4.38Å; D134-K138 PolarHBondContact O-N 2.87Å; D134-K138 VanDerWaalsContact O-N 3.15Å; I135-K138 PolarHBondContact O-N 3.44Å; Q136-K138 VanDerWaalsContact C-N 3.3Å; Q136-K138 PolarHBondContact O-N 3.26Å
139R85Confident86.1Confident49 Ų4967.1 Ų67.119%0.18532%0.317CS..Hα-helixtrans-69.9-41.7174.1-174.4179.673.2-177.14.1111.8F75 E107 I135 Q136 T137 Q142F75-R139 HydrophobicContact CE1-CB 4.15Å; E107-R139 IonicContact OE1-NH2 2.88Å; E107-R139 PolarHBondContact OE1-NH2 2.86Å; I135-R139 PolarHBondContact O-N 3.02Å; Q136-R139 WeakPolarHBondContact O-CA 3.43Å; Q136-R139 WeakPolarHBondContact O-CB 3.42Å; Q136-R139 PolarHBondContact O-N 3.38Å; Q136-R139 VanDerWaalsContact O-N 3.08Å; T137-R139 VanDerWaalsContact C-N 3.3Å; T137-R139 PolarHBondContact O-N 3.38Å; R139-Q142 PolarHBondContact O-N 2.97Å
140S78.9Confident85.4Confident71 Ų7168.1 Ų68.150%0.49732%0.322SS..Hα-helixtrans-71.8-32.6-175.461.40000113.3Q136 T137 Q142 Y143Q136-S140 PolarHBondContact O-N 3.19Å; Q136-S140 PolarHBondContact O-OG 3.11Å; T137-S140 PolarHBondContact O-N 3.36Å; T137-S140 PolarHBondContact O-OG 3.08Å; S140-Q142 PolarHBondContact O-N 2.98Å; S140-Y143 PolarHBondContact O-N 3.37Å
141F73.9Confident84.5Confident166 Ų16665.4 Ų65.473%0.72831%0.31SS*.THydrogen-bonded Turntrans-65.9-1.8176.7-74.4-58.1000115.4T137T137-F141 HydrophobicContact CG2-CD2 3.97Å; T137-F141 HydrophobicContact CG2-CE2 3.36Å; T137-F141 HydrophobicContact CG2-CZ 4.27Å; T137-F141 WeakPolarHBondContact O-CD2 3.4Å; T137-F141 PolarHBondContact O-N 3.42Å
142Q63.2Low83.7Confident40 Ų4070.6 Ų70.619%0.18733%0.334CS..THydrogen-bonded Turntrans-101.4-0.9179.6-64.6-153.8-4.400115.2T80 R139 S140T80-Q142 HydrophobicContact CG2-CG 4.41Å; T80-Q142 PolarHBondContact OG1-NE2 3.3Å; R139-Q142 PolarHBondContact O-N 2.97Å; S140-Q142 PolarHBondContact O-N 2.98Å
143Y52.2Low82.6Confident242 Ų24276.9 Ų76.995%0.94936%0.364SS*.  trans-1000176.4-73.9-81000112.1S140S140-Y143 PolarHBondContact O-N 3.37Å

Retrieved 143 of 143 residues in 78.6 ms (Link to these results)