A0A060YRS3_ONCMY Loading...

DNA-directed RNA polymerase subunit

Core component of RNA polymerase I (Pol I), a DNA-dependent RNA polymerase which synthesizes ribosomal RNA precursors using the four ribonucleoside triphosphates as substrates. Can mediate Pol I proofreading of the nascent RNA transcript. Anchors into the Pol I active site to monitor transcription fidelity and cleave mis-incorporated 5'-ribonucleotides. DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

AlphaFold DB , UniProt , Accession A0A060YRS3, Species ONCMY (Oncorhynchus mykiss, Rainbow trout), Gene polr1h, Length 117 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M55.2Low75.8Confident236 Ų23688.5 Ų88.5100%1.16353%0.525SS*.  0109.60-101.4166.1155.800105.3C3M1-C3 PolarHBondContact O-N 3.38Å
2S62.3Low77.1Confident78 Ų7883.7 Ų83.755%0.54550%0.498SS..  trans-58.3127.5175.629.50000108.8F4S2-F4 VanDerWaalsContact C-N 3.31Å
3C70.9Confident78.1Confident82 Ų8284 Ų8455%0.55449%0.491SS*.SBendtrans-80.7-16.7-175.549.30000112.5M1 P12 E13M1-C3 PolarHBondContact O-N 3.38Å; C3-P12 PolarHBondContact N-O 2.99Å; C3-P12 PolarHBondContact SG-O 3.49Å; C3-E13 VanDerWaalsContact SG-C 3.56Å; C3-E13 PolarHBondContact SG-O 2.81Å
4F72.3Confident79.1Confident108 Ų10880.1 Ų80.147%0.47447%0.47SS..  trans-123128.6175.8-56-80.6000110.2S2 P12S2-F4 VanDerWaalsContact C-N 3.31Å; F4-P12 PolarHBondContact N-O 2.79Å; F4-P12 VanDerWaalsContact N-O 3.09Å
5S68.5Low79.8Confident126 Ų12676.9 Ų76.988%0.88146%0.461SS*.  trans-108.9112.8167.555.40000107.9
6G69.7Low80.6Confident73 Ų7375.3 Ų75.375%0.75345%0.449SS*.  trans-172.2-169.4-173.800000114.4
7D80.3Confident81.3Confident83 Ų8376.2 Ų76.244%0.44446%0.455SS..  trans-50.4132.8-178.5-179.1-34.1000111.7N9 F10D7-N9 PolarHBondContact O-N 2.99Å; D7-N9 VanDerWaalsContact OD1-CB 3.23Å; D7-N9 WeakPolarHBondContact OD1-CB 3.19Å; D7-N9 VanDerWaalsContact OD1-CG 3.28Å; D7-N9 PolarHBondContact OD1-N 3.16Å; D7-N9 PolarHBondContact OD1-ND2 3.03Å; D7-F10 HydrophobicContact CB-CD2 3.99Å; D7-F10 HydrophobicContact CB-CE2 4.34Å; D7-F10 PolarHBondContact O-N 3.04Å
8P82.7Confident81.9Confident50 Ų5072.4 Ų72.433%0.32543%0.432SS..THydrogen-bonded Turntrans-56.3-14.6179.725.2-38.4000114.5F10 L18 F41P8-F10 PolarHBondContact O-N 3.34Å; P8-L18 WeakPolarHBondContact O-CD1 3.49Å; P8-F41 VanDerWaalsContact O-CE1 3.28Å; P8-F41 WeakPolarHBondContact O-CE1 3.26Å; P8-F41 WeakPolarHBondContact O-CZ 3.23Å
9N89.1Confident82.4Confident38 Ų3872 Ų7220%0.20343%0.432CS..THydrogen-bonded Turntrans-73.4-6.4172.7-64.4-55.4000113.7D7 L18 Q44D7-N9 PolarHBondContact O-N 2.99Å; D7-N9 VanDerWaalsContact OD1-CB 3.23Å; D7-N9 WeakPolarHBondContact OD1-CB 3.19Å; D7-N9 VanDerWaalsContact OD1-CG 3.28Å; D7-N9 PolarHBondContact OD1-N 3.16Å; D7-N9 PolarHBondContact OD1-ND2 3.03Å; N9-L18 PolarHBondContact O-N 3.47Å; N9-Q44 PolarHBondContact ND2-OE1 3.49Å; N9-Q44 VanDerWaalsContact ND2-OE1 3.09Å
10F91.8Very high82.7Confident100 Ų10075.8 Ų75.844%0.43945%0.448SS..BIsolated β-bridgetrans-119.9145178.8-62.5-93.9000112.5D7 P8 P12 V17D7-F10 HydrophobicContact CB-CD2 3.99Å; D7-F10 HydrophobicContact CB-CE2 4.34Å; D7-F10 PolarHBondContact O-N 3.04Å; P8-F10 PolarHBondContact O-N 3.34Å; F10-P12 WeakPolarHBondContact O-CD 3.19Å; F10-V17 HydrophobicContact CD1-CG2 3.99Å; F10-V17 HydrophobicContact CE1-CG2 3.59Å; F10-V17 HydrophobicContact CZ-CG2 4.36Å
11C91.3Very high83Confident0 Ų074.4 Ų74.40%044%0.442CS..  trans-71.2123.5178-179.80000110.9E13 C14 G15 N16 L18 C29C11-E13 PolarHBondContact O-N 2.87Å; C11-C14 PolarHBondContact O-N 3.31Å; C11-C14 VanDerWaalsContact SG-SG 3.65Å; C11-G15 WeakPolarHBondContact O-CA 3.45Å; C11-G15 PolarHBondContact O-N 3.1Å; C11-N16 HydrophobicContact CB-CB 4.48Å; C11-N16 WeakPolarHBondContact CB-O 3.45Å; C11-N16 PolarHBondContact N-O 3.36Å; C11-L18 HydrophobicContact CB-CD2 3.93Å; C11-L18 HydrophobicContact CB-CG 4.22Å; C11-C29 HydrophobicContact CB-CB 4.21Å; C11-C29 VanDerWaalsContact SG-SG 3.7Å
12P90.6Very high84.4Confident30 Ų3065.9 Ų65.920%0.19542%0.415CS..THydrogen-bonded Turntrans-70.3-13.5-178.129-36.3000114.1C3 F4 F10 F34C3-P12 PolarHBondContact N-O 2.99Å; C3-P12 PolarHBondContact SG-O 3.49Å; F4-P12 PolarHBondContact N-O 2.79Å; F4-P12 VanDerWaalsContact N-O 3.09Å; F10-P12 WeakPolarHBondContact O-CD 3.19Å; P12-F34 VanDerWaalsContact CD-CE1 3.43Å; P12-F34 HydrophobicContact CG-CD1 4Å; P12-F34 HydrophobicContact CG-CE1 3.27Å; P12-F34 HydrophobicContact CG-CE2 4.49Å; P12-F34 HydrophobicContact CG-CZ 3.58Å
13E90.8Very high85.4Confident88 Ų8871 Ų7141%0.41144%0.435SS..THydrogen-bonded Turntrans-98-27.1-178.1-68.5-64.9135.200113.6C3 C11 F34C3-E13 VanDerWaalsContact SG-C 3.56Å; C3-E13 PolarHBondContact SG-O 2.81Å; C11-E13 PolarHBondContact O-N 2.87Å; E13-F34 HydrophobicContact CB-CB 4.44Å; E13-F34 HydrophobicContact CG-CB 4.22Å; E13-F34 HydrophobicContact CG-CD2 3.71Å; E13-F34 HydrophobicContact CG-CE2 4.22Å; E13-F34 HydrophobicContact CG-CG 3.92Å
14C92.1Very high86.2Confident29 Ų2974.2 Ų74.220%0.19644%0.442CS..THydrogen-bonded Turntrans-140.6-0.2-175.472.70000115.4C11 N16 C29 C32C11-C14 PolarHBondContact O-N 3.31Å; C11-C14 VanDerWaalsContact SG-SG 3.65Å; C14-N16 PolarHBondContact O-N 3.13Å; C14-C29 PolarHBondContact SG-SG 3.08Å; C14-C32 HydrophobicContact CB-CB 4.21Å
15G89.6Confident87Confident32 Ų3275.6 Ų75.633%0.3345%0.454SS..  trans71.95.1178.200000115.3C11C11-G15 WeakPolarHBondContact O-CA 3.45Å; C11-G15 PolarHBondContact O-N 3.1Å
16N92.1Very high88.1Confident51 Ų5173 Ų7327%0.27343%0.433SS..PPolyproline II helixtrans-69.5143.5177.3-163.572.8000111.3C11 C14 L18 P30 R31C11-N16 HydrophobicContact CB-CB 4.48Å; C11-N16 WeakPolarHBondContact CB-O 3.45Å; C11-N16 PolarHBondContact N-O 3.36Å; C14-N16 PolarHBondContact O-N 3.13Å; N16-L18 PolarHBondContact O-N 3.5Å; N16-P30 WeakPolarHBondContact ND2-CG 3.45Å; N16-R31 HydrophobicContact CB-CB 4.28Å
17V93.3Very high89.2Confident91 Ų9169.8 Ų69.855%0.55240%0.399SS*.BIsolated β-bridgetrans-61.8131169.9-1790000109.1F10F10-V17 HydrophobicContact CD1-CG2 3.99Å; F10-V17 HydrophobicContact CE1-CG2 3.59Å; F10-V17 HydrophobicContact CZ-CG2 4.36Å
18L92.1Very high89.8Confident9 Ų968.7 Ų68.75%0.04740%0.398CS..PPolyproline II helixtrans-85143178.5-69170.9000110.2P8 N9 C11 N16 V27 C29 L36 F41P8-L18 WeakPolarHBondContact O-CD1 3.49Å; N9-L18 PolarHBondContact O-N 3.47Å; C11-L18 HydrophobicContact CB-CD2 3.93Å; C11-L18 HydrophobicContact CB-CG 4.22Å; N16-L18 PolarHBondContact O-N 3.5Å; L18-V27 HydrophobicContact CB-CG1 4.12Å; L18-V27 HydrophobicContact CD2-CG1 4.45Å; L18-C29 HydrophobicContact CD2-CB 3.76Å; L18-L36 HydrophobicContact CD1-CD1 3.35Å; L18-F41 HydrophobicContact CB-CZ 4.26Å; L18-F41 HydrophobicContact CD1-CZ 4.12Å
19P91.1Very high90.3Very high64 Ų6466.4 Ų66.442%0.41638%0.383SS..PPolyproline II helixtrans-67.9152.5175.827.5-30.1000110.3V27P19-V27 HydrophobicContact CG-CG1 3.91Å; P19-V27 VanDerWaalsContact O-CG1 3.3Å; P19-V27 WeakPolarHBondContact O-CG1 3.24Å
20L88.7Confident90.5Very high147 Ų14769.6 Ų69.677%0.7741%0.406SS*.PPolyproline II helixtrans-60.8143.4175.4-67174.4000110.6G22L20-G22 PolarHBondContact O-N 3.19Å
21P88.8Confident90.6Very high47 Ų4773.8 Ų73.831%0.30542%0.418SS..PPolyproline II helixtrans-50.4127.9170.7-29.936.5000112.9V27 V38 F41P21-V27 HydrophobicContact CB-CG2 4.31Å; P21-V27 HydrophobicContact CG-CG2 4.03Å; P21-V38 HydrophobicContact CB-CB 4.33Å; P21-V38 HydrophobicContact CB-CG1 3.62Å; P21-V38 HydrophobicContact CB-CG2 3.81Å; P21-V38 HydrophobicContact CG-CG1 4.02Å; P21-V38 HydrophobicContact CG-CG2 4.35Å; P21-F41 HydrophobicContact CG-CB 3.68Å; P21-F41 HydrophobicContact CG-CD1 4.07Å; P21-F41 HydrophobicContact CG-CD2 3.76Å; P21-F41 HydrophobicContact CG-CE2 4.43Å; P21-F41 HydrophobicContact CG-CG 3.56Å
22G83.9Confident90.7Very high58 Ų5876.4 Ų76.460%0.59844%0.436SS*.  trans-103.4-145.4173.700000112.2L20 Q24L20-G22 PolarHBondContact O-N 3.19Å; G22-Q24 PolarHBondContact O-N 3.09Å
23L83.9Confident90.8Very high185 Ų18578.5 Ų78.597%0.96946%0.456SS*.SBendtrans-71.7-14.1176.8-65.1174.1000114.3
24Q86.9Confident90.8Very high149 Ų14977.4 Ų77.470%0.69645%0.45SS*.SBendtrans-96.8144-173.741.8-159.73.900110.9G22 T26 V38G22-Q24 PolarHBondContact O-N 3.09Å; Q24-T26 PolarHBondContact O-N 3.39Å; Q24-V38 WeakPolarHBondContact O-CG2 3.43Å
25N89.3Confident90.7Very high138 Ų13879.4 Ų79.474%0.73846%0.464SS*.SBendtrans-73.23.1-173.9-69.5-0.7000114P37 V38N25-P37 WeakPolarHBondContact O-CA 3.34Å; N25-V38 PolarHBondContact O-N 3.23Å
26T92.1Very high90.8Very high70 Ų7079.1 Ų79.143%0.42946%0.455SS..EExtended strand (participates in β ladder)trans-140.2137.8-175.9-49.40000110.1Q24 L36Q24-T26 PolarHBondContact O-N 3.39Å; T26-L36 CarbonylContact C-O 3.58Å; T26-L36 VanDerWaalsContact CA-O 3.24Å; T26-L36 WeakPolarHBondContact CA-O 3.47Å; T26-L36 WeakPolarHBondContact CG2-O 3.3Å
27V92.4Very high90.7Very high6 Ų679.4 Ų79.44%0.03646%0.46CS..EExtended strand (participates in β ladder)trans-102.4126.7171.8175.40000107.9L18 P19 P21 S35 L36 V38 F41L18-V27 HydrophobicContact CB-CG1 4.12Å; L18-V27 HydrophobicContact CD2-CG1 4.45Å; P19-V27 HydrophobicContact CG-CG1 3.91Å; P19-V27 VanDerWaalsContact O-CG1 3.3Å; P19-V27 WeakPolarHBondContact O-CG1 3.24Å; P21-V27 HydrophobicContact CB-CG2 4.31Å; P21-V27 HydrophobicContact CG-CG2 4.03Å; V27-S35 CarbonylContact O-C 3.54Å; V27-S35 WeakPolarHBondContact O-CA 3.42Å; V27-L36 PolarHBondContact N-O 2.81Å; V27-L36 PolarHBondContact O-N 2.8Å; V27-V38 HydrophobicContact CG2-CG2 4.06Å; V27-F41 HydrophobicContact CB-CE2 3.89Å; V27-F41 HydrophobicContact CB-CZ 4.2Å; V27-F41 HydrophobicContact CG1-CE2 4.29Å; V27-F41 HydrophobicContact CG1-CZ 4.07Å; V27-F41 HydrophobicContact CG2-CD2 4.25Å; V27-F41 HydrophobicContact CG2-CE2 3.69Å; V27-F41 HydrophobicContact CG2-CZ 4.15Å
28S93.3Very high90.6Very high61 Ų6177.1 Ų77.143%0.42745%0.446SS..EExtended strand (participates in β ladder)trans-110.2138.1177.7-174.40000110.8A33 F34S28-A33 PolarHBondContact OG-O 2.98Å; S28-F34 CarbonylContact C-O 3.5Å; S28-F34 WeakPolarHBondContact CA-O 3.41Å
29C93.1Very high90.4Very high2 Ų280.3 Ų80.31%0.01447%0.469CS..  trans-70.8124.3174.1-177.50000110.1C11 C14 L18 R31 A33 F34C11-C29 HydrophobicContact CB-CB 4.21Å; C11-C29 VanDerWaalsContact SG-SG 3.7Å; C14-C29 PolarHBondContact SG-SG 3.08Å; L18-C29 HydrophobicContact CD2-CB 3.76Å; C29-R31 PolarHBondContact O-N 3.37Å; C29-R31 VanDerWaalsContact O-N 3.16Å; C29-A33 VanDerWaalsContact O-CA 3.26Å; C29-A33 WeakPolarHBondContact O-CA 3.48Å; C29-A33 PolarHBondContact O-N 3.27Å; C29-F34 HydrophobicContact CB-CB 4.35Å; C29-F34 WeakPolarHBondContact CB-O 3.49Å; C29-F34 PolarHBondContact N-O 3.09Å
30P93.1Very high90.2Very high105 Ų10582.8 Ų82.868%0.68248%0.475SS*.THydrogen-bonded Turntrans-69.3-14.2-179.128.9-36000113.5N16N16-P30 WeakPolarHBondContact ND2-CG 3.45Å
31R93.7Very high90Very high187 Ų18776.9 Ų76.971%0.70644%0.443SS*.THydrogen-bonded Turntrans-95.3-46.2-176.2-175.7176.5179.9157.10.5113.7N16 C29N16-R31 HydrophobicContact CB-CB 4.28Å; C29-R31 PolarHBondContact O-N 3.37Å; C29-R31 VanDerWaalsContact O-N 3.16Å
32C93.7Very high89.8Confident56 Ų5678.8 Ų78.838%0.37846%0.458SS..THydrogen-bonded Turntrans-119.95.6-175.468.10000114.1C14 F34C14-C32 HydrophobicContact CB-CB 4.21Å; C32-F34 PolarHBondContact O-N 2.77Å; C32-F34 VanDerWaalsContact SG-CB 3.6Å
33A91.9Very high89.7Confident74 Ų7480 Ų8061%0.61247%0.471SS*.  trans61.84.8-179.100000116.2S28 C29 S35S28-A33 PolarHBondContact OG-O 2.98Å; C29-A33 VanDerWaalsContact O-CA 3.26Å; C29-A33 WeakPolarHBondContact O-CA 3.48Å; C29-A33 PolarHBondContact O-N 3.27Å; A33-S35 PolarHBondContact O-N 3.14Å
34F91.6Very high89.6Confident64 Ų6475.3 Ų75.328%0.28144%0.444SS..  trans-56.9137.6173.5176.4-99.9000111.5P12 E13 S28 C29 C32 L36P12-F34 VanDerWaalsContact CD-CE1 3.43Å; P12-F34 HydrophobicContact CG-CD1 4Å; P12-F34 HydrophobicContact CG-CE1 3.27Å; P12-F34 HydrophobicContact CG-CE2 4.49Å; P12-F34 HydrophobicContact CG-CZ 3.58Å; E13-F34 HydrophobicContact CB-CB 4.44Å; E13-F34 HydrophobicContact CG-CB 4.22Å; E13-F34 HydrophobicContact CG-CD2 3.71Å; E13-F34 HydrophobicContact CG-CE2 4.22Å; E13-F34 HydrophobicContact CG-CG 3.92Å; S28-F34 CarbonylContact C-O 3.5Å; S28-F34 WeakPolarHBondContact CA-O 3.41Å; C29-F34 HydrophobicContact CB-CB 4.35Å; C29-F34 WeakPolarHBondContact CB-O 3.49Å; C29-F34 PolarHBondContact N-O 3.09Å; C32-F34 PolarHBondContact O-N 2.77Å; C32-F34 VanDerWaalsContact SG-CB 3.6Å; F34-L36 HydrophobicContact CD1-CD2 4.24Å; F34-L36 HydrophobicContact CD1-CG 4.19Å; F34-L36 HydrophobicContact CE1-CD1 4.26Å; F34-L36 HydrophobicContact CE1-CD2 3.17Å; F34-L36 HydrophobicContact CE1-CG 3.54Å; F34-L36 HydrophobicContact CZ-CD2 3.51Å; F34-L36 HydrophobicContact CZ-CG 4.32Å
35S91.2Very high89.5Confident71 Ų7174.7 Ų74.750%0.49744%0.441SS..EExtended strand (participates in β ladder)trans-124.4136.2-170.361.80000112.8V27 A33V27-S35 CarbonylContact O-C 3.54Å; V27-S35 WeakPolarHBondContact O-CA 3.42Å; A33-S35 PolarHBondContact O-N 3.14Å
36L90Very high89.2Confident26 Ų2675.6 Ų75.614%0.13644%0.444CS..EExtended strand (participates in β ladder)trans-124144.5179.9-63176.1000111.1L18 T26 V27 F34 F41L18-L36 HydrophobicContact CD1-CD1 3.35Å; T26-L36 CarbonylContact C-O 3.58Å; T26-L36 VanDerWaalsContact CA-O 3.24Å; T26-L36 WeakPolarHBondContact CA-O 3.47Å; T26-L36 WeakPolarHBondContact CG2-O 3.3Å; V27-L36 PolarHBondContact N-O 2.81Å; V27-L36 PolarHBondContact O-N 2.8Å; F34-L36 HydrophobicContact CD1-CD2 4.24Å; F34-L36 HydrophobicContact CD1-CG 4.19Å; F34-L36 HydrophobicContact CE1-CD1 4.26Å; F34-L36 HydrophobicContact CE1-CD2 3.17Å; F34-L36 HydrophobicContact CE1-CG 3.54Å; F34-L36 HydrophobicContact CZ-CD2 3.51Å; F34-L36 HydrophobicContact CZ-CG 4.32Å; L36-F41 HydrophobicContact CB-CE2 4.49Å; L36-F41 HydrophobicContact CD1-CE2 4.37Å; L36-F41 HydrophobicContact CD1-CZ 4.38Å
37P91.1Very high89.2Confident58 Ų5881.8 Ų81.838%0.37746%0.459SS..EExtended strand (participates in β ladder)trans-70.6144.7171.329.3-29.5000110.9N25 S39 E40N25-P37 WeakPolarHBondContact O-CA 3.34Å; P37-S39 PolarHBondContact O-N 3.22Å; P37-S39 VanDerWaalsContact O-N 3.08Å; P37-E40 HydrophobicContact CG-CG 4Å; P37-E40 WeakPolarHBondContact O-CB 3.28Å; P37-E40 PolarHBondContact O-N 3.5Å; P37-E40 VanDerWaalsContact O-N 3.1Å
38V90.3Very high89.1Confident42 Ų4287 Ų8726%0.25550%0.496SS..G310 helixtrans-59-23.9179.1167.90000112.7P21 Q24 N25 V27 E40 F41P21-V38 HydrophobicContact CB-CB 4.33Å; P21-V38 HydrophobicContact CB-CG1 3.62Å; P21-V38 HydrophobicContact CB-CG2 3.81Å; P21-V38 HydrophobicContact CG-CG1 4.02Å; P21-V38 HydrophobicContact CG-CG2 4.35Å; Q24-V38 WeakPolarHBondContact O-CG2 3.43Å; N25-V38 PolarHBondContact O-N 3.23Å; V27-V38 HydrophobicContact CG2-CG2 4.06Å; V38-E40 PolarHBondContact O-N 2.85Å; V38-E40 VanDerWaalsContact O-N 3.14Å; V38-F41 WeakPolarHBondContact O-CB 3.35Å; V38-F41 PolarHBondContact O-N 2.96Å
39S88.2Confident89Confident77 Ų7789.3 Ų89.354%0.53851%0.512SS..G310 helixtrans-55.7-29.1175.751.90000113.5P37 F41 S42P37-S39 PolarHBondContact O-N 3.22Å; P37-S39 VanDerWaalsContact O-N 3.08Å; S39-F41 PolarHBondContact O-N 2.78Å; S39-S42 WeakPolarHBondContact CA-OG 3.49Å; S39-S42 WeakPolarHBondContact O-CB 3.2Å; S39-S42 PolarHBondContact O-N 2.88Å; S39-S42 VanDerWaalsContact O-N 3.09Å; S39-S42 PolarHBondContact O-OG 2.92Å
40E86.7Confident88.9Confident116 Ų11694.5 Ų94.554%0.54254%0.544SS..G310 helixtrans-66.4-19.1177-65.7-66.4169.500113.4P37 V38P37-E40 HydrophobicContact CG-CG 4Å; P37-E40 WeakPolarHBondContact O-CB 3.28Å; P37-E40 PolarHBondContact O-N 3.5Å; P37-E40 VanDerWaalsContact O-N 3.1Å; V38-E40 PolarHBondContact O-N 2.85Å; V38-E40 VanDerWaalsContact O-N 3.14Å
41F84.8Confident88.6Confident22 Ų2295.4 Ų95.410%0.09655%0.547CS..G310 helixtrans-92.40.8176.5-62.5-94.8000112.5P8 L18 P21 V27 L36 V38 S39P8-F41 VanDerWaalsContact O-CE1 3.28Å; P8-F41 WeakPolarHBondContact O-CE1 3.26Å; P8-F41 WeakPolarHBondContact O-CZ 3.23Å; L18-F41 HydrophobicContact CB-CZ 4.26Å; L18-F41 HydrophobicContact CD1-CZ 4.12Å; P21-F41 HydrophobicContact CG-CB 3.68Å; P21-F41 HydrophobicContact CG-CD1 4.07Å; P21-F41 HydrophobicContact CG-CD2 3.76Å; P21-F41 HydrophobicContact CG-CE2 4.43Å; P21-F41 HydrophobicContact CG-CG 3.56Å; V27-F41 HydrophobicContact CB-CE2 3.89Å; V27-F41 HydrophobicContact CB-CZ 4.2Å; V27-F41 HydrophobicContact CG1-CE2 4.29Å; V27-F41 HydrophobicContact CG1-CZ 4.07Å; V27-F41 HydrophobicContact CG2-CD2 4.25Å; V27-F41 HydrophobicContact CG2-CE2 3.69Å; V27-F41 HydrophobicContact CG2-CZ 4.15Å; L36-F41 HydrophobicContact CB-CE2 4.49Å; L36-F41 HydrophobicContact CD1-CE2 4.37Å; L36-F41 HydrophobicContact CD1-CZ 4.38Å; V38-F41 WeakPolarHBondContact O-CB 3.35Å; V38-F41 PolarHBondContact O-N 2.96Å; S39-F41 PolarHBondContact O-N 2.78Å
42S84.4Confident88.2Confident88 Ų8894.8 Ų94.862%0.61555%0.55SS*.THydrogen-bonded Turntrans-70.4143.9-176.2-52.60000111.8S39 Q44S39-S42 WeakPolarHBondContact CA-OG 3.49Å; S39-S42 WeakPolarHBondContact O-CB 3.2Å; S39-S42 PolarHBondContact O-N 2.88Å; S39-S42 VanDerWaalsContact O-N 3.09Å; S39-S42 PolarHBondContact O-OG 2.92Å; S42-Q44 VanDerWaalsContact C-N 3.33Å; S42-Q44 PolarHBondContact O-N 3.48Å
43G82.8Confident87.7Confident84 Ų8499.2 Ų99.287%0.86657%0.57SS**THydrogen-bonded Turntrans80.86.6174.200000115.3E45G43-E45 PolarHBondContact O-N 3.09Å
44Q80.6Confident87Confident85 Ų85100.6 Ų100.640%0.39757%0.573SS.*  trans-77.8119.2170.2-67.6-175.73500110.5N9 S42N9-Q44 PolarHBondContact ND2-OE1 3.49Å; N9-Q44 VanDerWaalsContact ND2-OE1 3.09Å; S42-Q44 VanDerWaalsContact C-N 3.33Å; S42-Q44 PolarHBondContact O-N 3.48Å
45E84.4Confident85.8Confident136 Ų136105 Ų10564%0.63660%0.598SS**  trans-117121.1174.5-168-169.7162.300109G43 R47G43-E45 PolarHBondContact O-N 3.09Å; E45-R47 HydrophobicContact CG-CG 4.42Å; E45-R47 IonicContact OE1-CZ 3.54Å; E45-R47 IonicContact OE1-NE 2.83Å; E45-R47 PolarHBondContact OE1-NE 2.89Å; E45-R47 IonicContact OE1-NH2 2.72Å; E45-R47 PolarHBondContact OE1-NH2 3.15Å; E45-R47 VanDerWaalsContact OE1-NH2 3.15Å; E45-R47 IonicContact OE2-CZ 2.79Å; E45-R47 IonicContact OE2-NE 3.6Å; E45-R47 IonicContact OE2-NH2 3.09Å; E45-R47 PolarHBondContact OE2-NH2 2.79Å
46I84.8Confident84.5Confident157 Ų157110.8 Ų110.881%0.80562%0.618SS**  trans-98.9113.5174.9-57.4174.5000108.2
47R91.5Very high82.8Confident200 Ų200112.6 Ų112.676%0.75564%0.642SS**  trans-100123.3172.7-66-175.2-177.9161.49.8109.7E45E45-R47 HydrophobicContact CG-CG 4.42Å; E45-R47 IonicContact OE1-CZ 3.54Å; E45-R47 IonicContact OE1-NE 2.83Å; E45-R47 PolarHBondContact OE1-NE 2.89Å; E45-R47 IonicContact OE1-NH2 2.72Å; E45-R47 PolarHBondContact OE1-NH2 3.15Å; E45-R47 VanDerWaalsContact OE1-NH2 3.15Å; E45-R47 IonicContact OE2-CZ 2.79Å; E45-R47 IonicContact OE2-NE 3.6Å; E45-R47 IonicContact OE2-NH2 3.09Å; E45-R47 PolarHBondContact OE2-NH2 2.79Å
48S90.3Very high80.9Confident115 Ų115113.5 Ų113.580%0.80465%0.65SS**  trans-120.1138.917159.80000109.3
49S91.4Very high79Confident110 Ų110116.4 Ų116.477%0.76967%0.672SS**  trans-125.2140.517359.20000109.1
50V89.6Confident77.2Confident111 Ų111117.6 Ų117.667%0.67368%0.676SS**  trans-110.1117.8174.2-179.30000107.1F52V50-F52 HydrophobicContact CG1-CE1 4.16Å; V50-F52 HydrophobicContact CG1-CE2 4.14Å; V50-F52 HydrophobicContact CG1-CZ 3.94Å
51V88.3Confident75.2Confident125 Ų125115.3 Ų115.376%0.75868%0.677SS**  trans-94.5115.2172.8-177.40000107.4
52F84.8Confident73.4Confident173 Ų173119.4 Ų119.476%0.75970%0.703SS**PPolyproline II helixtrans-81.1135.6172.6-63.2-83.1000109.2V50V50-F52 HydrophobicContact CG1-CE1 4.16Å; V50-F52 HydrophobicContact CG1-CE2 4.14Å; V50-F52 HydrophobicContact CG1-CZ 3.94Å
53N82.1Confident71.5Confident149 Ų149122.4 Ų122.480%0.79771%0.708SS**PPolyproline II helixtrans-66.8132.8170.3-74.7-9.3000109.2L55N53-L55 PolarHBondContact O-N 3.09Å
54P78Confident69.7Low103 Ų103126.7 Ų126.767%0.66971%0.705SS**PPolyproline II helixtrans-62.4135.5175.523.3-30.4000110.5E56P54-E56 PolarHBondContact O-N 2.72Å
55L67.3Low68.1Low157 Ų157127.9 Ų127.982%0.82271%0.711SS**G310 helixtrans-64.5-19.3178.9-71.7169000112.9N53 G57 S58N53-L55 PolarHBondContact O-N 3.09Å; L55-G57 PolarHBondContact O-N 3.14Å; L55-S58 PolarHBondContact O-N 2.58Å
56E62.4Low66.4Low193 Ų193127.2 Ų127.290%0.90271%0.711SS**G310 helixtrans-73.4-5.6-171.8-61.4-175.2163.400114.4P54P54-E56 PolarHBondContact O-N 2.72Å
57G55.7Low65Low63 Ų63122.8 Ų122.865%0.64969%0.694SS**G310 helixtrans-102.5-3.4169.300000114.3L55 S59L55-G57 PolarHBondContact O-N 3.14Å; G57-S59 PolarHBondContact O-N 2.83Å
58S51.3Low63.6Low77 Ų77120 Ų12054%0.53869%0.69SS.*  trans-88.541.3178.9-177.50000111.4L55 V60L55-S58 PolarHBondContact O-N 2.58Å; S58-V60 PolarHBondContact O-N 3.16Å
59S49.6Very low62.4Low103 Ų103116.9 Ų116.972%0.7266%0.664SS**  trans-67.381.8134.557.60000105G57 A61G57-S59 PolarHBondContact O-N 2.83Å; S59-A61 PolarHBondContact O-N 2.84Å
60V50Low61.4Low103 Ų103119.2 Ų119.262%0.62466%0.66SS**  trans-61.382.3146.5-171.90000101.9S58 V62S58-V60 PolarHBondContact O-N 3.16Å; V60-V62 HydrophobicContact CG1-CG2 3.75Å; V60-V62 PolarHBondContact O-N 2.81Å
61A45.3Very low60.7Low67 Ų67116.3 Ų116.355%0.55465%0.652SS**  trans-46.295.5131.400000101.5S59 E63S59-A61 PolarHBondContact O-N 2.84Å; A61-E63 HydrophobicContact CB-CG 4.16Å; A61-E63 PolarHBondContact O-N 2.76Å
62V46.4Very low60.4Low109 Ų109113 Ų11366%0.66164%0.638SS**  trans-57.981.7141.5-174.8000099.9V60 E64V60-V62 HydrophobicContact CG1-CG2 3.75Å; V60-V62 PolarHBondContact O-N 2.81Å; V62-E64 HydrophobicContact CG1-CG 4.17Å; V62-E64 PolarHBondContact O-N 2.83Å
63E44.7Very low60.6Low150 Ų150109 Ų10970%0.70163%0.628SS**  trans-51.295.5139.5-66-175.8-178.70099.4A61 E65A61-E63 HydrophobicContact CB-CG 4.16Å; A61-E63 PolarHBondContact O-N 2.76Å; E63-E65 PolarHBondContact O-N 3.42Å
64E46.3Very low61Low174 Ų174104.2 Ų104.281%0.81360%0.602SS**  trans-46.871130.1-61.1177.9171.700104.6V62 D66V62-E64 HydrophobicContact CG1-CG 4.17Å; V62-E64 PolarHBondContact O-N 2.83Å; E64-D66 PolarHBondContact O-N 2.8Å
65E46.1Very low61.6Low111 Ų111106.8 Ų106.852%0.51961%0.61SS.*  trans-52.987.5131.5-84.1-163.2135.200100.4E63 S67 K70E63-E65 PolarHBondContact O-N 3.42Å; E65-S67 WeakPolarHBondContact O-CA 2.79Å; E65-S67 PolarHBondContact O-N 2.97Å; E65-S67 PolarHBondContact O-OG 2.93Å; E65-K70 IonicContact OE1-NZ 3.15Å; E65-K70 PolarHBondContact OE1-NZ 2.86Å
66D48.8Very low62.7Low121 Ų121103.1 Ų103.165%0.64759%0.585SS**  trans-38.189.3134.8-17731.6000103.5E64 E68E64-D66 PolarHBondContact O-N 2.8Å; D66-E68 PolarHBondContact O-N 2.58Å
67S55.6Low64.2Low64 Ų64101 Ų10145%0.44857%0.569SS.*  trans-75.979.3-168.3-66.50000101.3E65 L69 R110E65-S67 WeakPolarHBondContact O-CA 2.79Å; E65-S67 PolarHBondContact O-N 2.97Å; E65-S67 PolarHBondContact O-OG 2.93Å; S67-L69 PolarHBondContact O-N 3.47Å; S67-R110 PolarHBondContact O-NH1 2.77Å
68E62.2Low66Low142 Ų14298 Ų9866%0.66454%0.538SS*.  trans-44.9119.8163.8-70.6-168.113800103.6D66 K70D66-E68 PolarHBondContact O-N 2.58Å; E68-K70 WeakPolarHBondContact O-CG 3.24Å; E68-K70 PolarHBondContact O-N 3Å
69L65.3Low68Low50 Ų5098.5 Ų98.526%0.26254%0.542SS..  trans-65.394.4-177.5-68169.6000106.1S67 G71 V87 T105 I107 R110S67-L69 PolarHBondContact O-N 3.47Å; L69-G71 PolarHBondContact O-N 2.82Å; L69-G71 VanDerWaalsContact O-N 3.15Å; L69-V87 HydrophobicContact CB-CB 4.13Å; L69-V87 HydrophobicContact CB-CG1 4.44Å; L69-V87 HydrophobicContact CB-CG2 3.72Å; L69-V87 HydrophobicContact CD1-CG2 4.37Å; L69-T105 HydrophobicContact CD1-CG2 4.29Å; L69-T105 HydrophobicContact CD2-CG2 3.59Å; L69-I107 HydrophobicContact CD1-CB 4.11Å; L69-I107 HydrophobicContact CD1-CG2 3.87Å; L69-R110 VanDerWaalsContact CD2-NH1 3.3Å
70K68.9Low70.1Confident159 Ų159102 Ų10269%0.69154%0.539SS*.  trans-69.3111-179.2-68.4175.3-172.2163.10106.8E65 E68E65-K70 IonicContact OE1-NZ 3.15Å; E65-K70 PolarHBondContact OE1-NZ 2.86Å; E68-K70 WeakPolarHBondContact O-CG 3.24Å; E68-K70 PolarHBondContact O-N 3Å
71G74.9Confident72.2Confident49 Ų4998.9 Ų98.951%0.50552%0.521SS..SBendtrans153173.5175.800000113.2L69L69-G71 PolarHBondContact O-N 2.82Å; L69-G71 VanDerWaalsContact O-N 3.15Å
72A82.6Confident74.5Confident56 Ų56100 Ų10046%0.46352%0.518SS..  trans-73.7131.1176.700000110.3V87 Y88A72-V87 WeakPolarHBondContact O-CA 3.38Å; A72-Y88 HydrophobicContact CB-CE1 4.02Å
73V88.9Confident76.6Confident88 Ų88100.1 Ų100.153%0.53351%0.51SS..EExtended strand (participates in β ladder)trans-80.3133.3171.9-176.40000108.6M86 V87 I107V73-M86 CarbonylContact C-O 3.49Å; V73-M86 WeakPolarHBondContact CA-O 3.23Å; V73-V87 HydrophobicContact CG2-CG2 3.86Å; V73-I107 HydrophobicContact CG2-CG2 4.45Å
74I90.4Very high78.9Confident49 Ų4999.4 Ų99.425%0.25151%0.507SS..EExtended strand (participates in β ladder)trans-118.3153.8176.461.5157.1000111.3R76 G85 M86 Y88 F104I74-R76 HydrophobicContact CD1-CB 3.79Å; I74-R76 HydrophobicContact CG1-CB 4.14Å; I74-R76 PolarHBondContact O-N 2.91Å; I74-G85 WeakPolarHBondContact O-CA 3.34Å; I74-M86 HydrophobicContact CG1-CB 4.41Å; I74-M86 WeakPolarHBondContact CG1-O 3.38Å; I74-M86 PolarHBondContact N-O 2.78Å; I74-M86 PolarHBondContact O-N 2.86Å; I74-M86 VanDerWaalsContact O-N 3.09Å; I74-Y88 HydrophobicContact CG2-CD1 3.65Å; I74-Y88 HydrophobicContact CG2-CE1 3.87Å; I74-F104 HydrophobicContact CD1-CD1 3.64Å; I74-F104 HydrophobicContact CD1-CE1 3.45Å; I74-F104 VanDerWaalsContact CD1-CE1 3.45Å
75D91.3Very high81Confident157 Ų15791.3 Ų91.384%0.8447%0.47SS*.EExtended strand (participates in β ladder)trans-79.263.6177.9-62.1-28.9000111.3
76R90.6Very high83.3Confident81 Ų8186 Ų8631%0.30645%0.445SS..EExtended strand (participates in β ladder)trans-112.8139.8173-172.9173.1177.1135.2-6.2109.9I74 G85 M86 F104 E113 E115I74-R76 HydrophobicContact CD1-CB 3.79Å; I74-R76 HydrophobicContact CG1-CB 4.14Å; I74-R76 PolarHBondContact O-N 2.91Å; R76-G85 PolarHBondContact O-N 2.94Å; R76-G85 VanDerWaalsContact O-N 3.12Å; R76-M86 HydrophobicContact CB-CB 4.41Å; R76-M86 HydrophobicContact CB-CG 4.27Å; R76-M86 HydrophobicContact CB-SD 4.16Å; R76-M86 HydrophobicContact CG-SD 3.88Å; R76-F104 VanDerWaalsContact NH1-CE2 3.32Å; R76-E113 IonicContact NE-OE2 3.37Å; R76-E113 IonicContact NH2-OE2 3.6Å; R76-E115 IonicContact CZ-OE2 2.89Å; R76-E115 VanDerWaalsContact CZ-OE2 3.28Å; R76-E115 IonicContact NH1-OE2 3.62Å; R76-E115 PolarHBondContact NH1-OE2 2.69Å; R76-E115 IonicContact NH2-OE2 3.42Å; R76-E115 PolarHBondContact NH2-OE2 3.18Å
77R93.9Very high85.4Confident147 Ų14780.5 Ų80.556%0.55542%0.416SS*.EExtended strand (participates in β ladder)trans-87.8126.8178.6-162.9177.5-163.8-177.90.4110.4S79 N82R77-S79 PolarHBondContact O-N 2.79Å; R77-N82 WeakPolarHBondContact CD-OD1 3.17Å; R77-N82 VanDerWaalsContact NE-CG 3.27Å; R77-N82 PolarHBondContact NE-O 3.44Å; R77-N82 PolarHBondContact NE-OD1 2.87Å; R77-N82 VanDerWaalsContact NH2-CG 3.27Å; R77-N82 PolarHBondContact NH2-ND2 2.81Å; R77-N82 PolarHBondContact NH2-OD1 2.91Å
78C93.7Very high87.1Confident1 Ų182.3 Ų82.31%0.00741%0.413CS..  trans-70.2128.3178176.50000111.5R80 N82 K83 M86 C106 C109C78-R80 PolarHBondContact O-N 3.29Å; C78-R80 VanDerWaalsContact O-N 3.17Å; C78-R80 PolarHBondContact SG-N 3.1Å; C78-R80 VanDerWaalsContact SG-N 3.4Å; C78-N82 VanDerWaalsContact O-CA 3.22Å; C78-N82 WeakPolarHBondContact O-CA 3.35Å; C78-N82 PolarHBondContact O-N 3.4Å; C78-K83 PolarHBondContact N-O 3.17Å; C78-M86 HydrophobicContact CB-SD 4.35Å; C78-C106 HydrophobicContact CB-CB 3.88Å; C78-C106 VanDerWaalsContact CB-SG 3.58Å; C78-C109 VanDerWaalsContact SG-SG 3.63Å
79S93.4Very high88.4Confident88 Ų8879.3 Ų79.362%0.61540%0.399SS*.THydrogen-bonded Turntrans-61.7-22.2177.958.60000114.2R77 Y111 E113R77-S79 PolarHBondContact O-N 2.79Å; S79-Y111 WeakPolarHBondContact OG-CE1 3.36Å; S79-E113 VanDerWaalsContact CB-OE1 3.23Å; S79-E113 WeakPolarHBondContact CB-OE1 3.4Å; S79-E113 PolarHBondContact N-OE1 2.86Å; S79-E113 PolarHBondContact OG-OE1 3.47Å
80R93.3Very high89.6Confident175 Ų17580.2 Ų80.266%0.6641%0.407SS*.THydrogen-bonded Turntrans-91.3-50.3-177.5-170.2-179.7-177.2-1712.1114.1C78 Y111C78-R80 PolarHBondContact O-N 3.29Å; C78-R80 VanDerWaalsContact O-N 3.17Å; C78-R80 PolarHBondContact SG-N 3.1Å; C78-R80 VanDerWaalsContact SG-N 3.4Å; R80-Y111 HydrophobicContact CB-CD1 3.96Å; R80-Y111 HydrophobicContact CB-CD2 4.46Å; R80-Y111 HydrophobicContact CB-CE1 4.48Å; R80-Y111 HydrophobicContact CB-CG 3.94Å
81C93.6Very high90.6Very high38 Ų3880.5 Ų80.526%0.25740%0.404SS..THydrogen-bonded Turntrans-107.7-5.1-174.375.50000113.9K83 C109C81-K83 PolarHBondContact O-N 3Å; C81-K83 VanDerWaalsContact O-N 3.1Å; C81-C109 HydrophobicContact CB-CB 3.96Å; C81-C109 VanDerWaalsContact SG-SG 3.61Å
82N92.7Very high91.2Very high92 Ų9281.9 Ų81.949%0.49240%0.397SS..  trans63.314.7173.5-143.931.5000115.2R77 C78R77-N82 WeakPolarHBondContact CD-OD1 3.17Å; R77-N82 VanDerWaalsContact NE-CG 3.27Å; R77-N82 PolarHBondContact NE-O 3.44Å; R77-N82 PolarHBondContact NE-OD1 2.87Å; R77-N82 VanDerWaalsContact NH2-CG 3.27Å; R77-N82 PolarHBondContact NH2-ND2 2.81Å; R77-N82 PolarHBondContact NH2-OD1 2.91Å; C78-N82 VanDerWaalsContact O-CA 3.22Å; C78-N82 WeakPolarHBondContact O-CA 3.35Å; C78-N82 PolarHBondContact O-N 3.4Å
83K91.7Very high91.4Very high111 Ų11184.1 Ų84.148%0.48340%0.399SS..  trans-92.6152173.8-57.8180-157.9-69.20110.5C78 C81 H108C78-K83 PolarHBondContact N-O 3.17Å; C81-K83 PolarHBondContact O-N 3Å; C81-K83 VanDerWaalsContact O-N 3.1Å; K83-H108 VanDerWaalsContact CB-CD2 3.44Å; K83-H108 WeakPolarHBondContact CB-CD2 3.23Å; K83-H108 HydrophobicContact CD-CB 3.62Å
84E92.6Very high91.3Very high135 Ų13585.9 Ų85.963%0.63140%0.396SS*.EExtended strand (participates in β ladder)trans-84.5150.8175.9-66.9175.5166.300111.2H108E84-H108 PolarHBondContact O-CD2 2.9Å; E84-H108 PolarHBondContact O-NE2 2.83Å
85G90.7Very high91.2Very high4 Ų486.5 Ų86.54%0.04141%0.405CS..EExtended strand (participates in β ladder)trans105.1105.6-178.500000111.7I74 R76 I107I74-G85 WeakPolarHBondContact O-CA 3.34Å; R76-G85 PolarHBondContact O-N 2.94Å; R76-G85 VanDerWaalsContact O-N 3.12Å; G85-I107 WeakPolarHBondContact O-CG1 3.31Å; G85-I107 PolarHBondContact O-N 3.39Å
86M93.6Very high90.7Very high0 Ų084 Ų840%041%0.406CS..EExtended strand (participates in β ladder)trans-132.3145.9170.4-58.4-17278.400109.6V73 I74 R76 C78 F104 T105 C106 E113V73-M86 CarbonylContact C-O 3.49Å; V73-M86 WeakPolarHBondContact CA-O 3.23Å; I74-M86 HydrophobicContact CG1-CB 4.41Å; I74-M86 WeakPolarHBondContact CG1-O 3.38Å; I74-M86 PolarHBondContact N-O 2.78Å; I74-M86 PolarHBondContact O-N 2.86Å; I74-M86 VanDerWaalsContact O-N 3.09Å; R76-M86 HydrophobicContact CB-CB 4.41Å; R76-M86 HydrophobicContact CB-CG 4.27Å; R76-M86 HydrophobicContact CB-SD 4.16Å; R76-M86 HydrophobicContact CG-SD 3.88Å; C78-M86 HydrophobicContact CB-SD 4.35Å; M86-F104 HydrophobicContact CB-CB 4.37Å; M86-F104 HydrophobicContact CE-CB 3.64Å; M86-F104 WeakPolarHBondContact CE-O 3.45Å; M86-F104 HydrophobicContact SD-CB 4.15Å; M86-T105 CarbonylContact C-O 3.53Å; M86-T105 VanDerWaalsContact CA-O 3.31Å; M86-T105 WeakPolarHBondContact CA-O 3.45Å; M86-C106 HydrophobicContact CE-CB 4.15Å; M86-E113 HydrophobicContact CE-CG 4.23Å
87V93.8Very high90.6Very high5 Ų586.8 Ų86.83%0.0343%0.427CS..EExtended strand (participates in β ladder)trans-95.7133171.6173.50000108.6L69 A72 V73 F104 T105 I107L69-V87 HydrophobicContact CB-CB 4.13Å; L69-V87 HydrophobicContact CB-CG1 4.44Å; L69-V87 HydrophobicContact CB-CG2 3.72Å; L69-V87 HydrophobicContact CD1-CG2 4.37Å; A72-V87 WeakPolarHBondContact O-CA 3.38Å; V73-V87 HydrophobicContact CG2-CG2 3.86Å; V87-F104 CarbonylContact O-C 3.59Å; V87-F104 WeakPolarHBondContact O-CA 3.17Å; V87-T105 PolarHBondContact N-O 2.84Å; V87-T105 PolarHBondContact O-N 3.47Å; V87-I107 HydrophobicContact CG2-CG2 3.99Å
88Y91.7Very high90.2Very high101 Ų10183.5 Ų83.540%0.39642%0.418SS..EExtended strand (participates in β ladder)trans-106.1147.7176.680.7-82.3000112.3A72 I74 T90 V102 F103 F104A72-Y88 HydrophobicContact CB-CE1 4.02Å; I74-Y88 HydrophobicContact CG2-CD1 3.65Å; I74-Y88 HydrophobicContact CG2-CE1 3.87Å; Y88-T90 HydrophobicContact CD2-CG2 4.38Å; Y88-V102 HydrophobicContact CD2-CG1 4.23Å; Y88-F103 CarbonylContact C-O 3.58Å; Y88-F103 WeakPolarHBondContact CA-O 3.37Å; Y88-F104 HydrophobicContact CG-CE1 4.47Å
89H89.9Confident89.8Confident80 Ų8085.2 Ų85.237%0.3744%0.436SS..EExtended strand (participates in β ladder)trans-140.8146.8165.759.4-81000109.6F103 Q112H89-F103 WeakPolarHBondContact CE1-CB 3.21Å; H89-F103 PolarHBondContact N-O 3.26Å; H89-F103 VanDerWaalsContact NE2-CB 3.34Å; H89-F103 WeakPolarHBondContact NE2-CB 3.41Å; H89-F103 AromaticContact NE2-CD2 3.87Å; H89-F103 AromaticContact NE2-CG 3.67Å; H89-F103 PolarHBondContact O-N 3.09Å; H89-Q112 PolarHBondContact CE1-NE2 2.93Å; H89-Q112 VanDerWaalsContact CE1-NE2 3.33Å
90T89.8Confident89.5Confident68 Ų6885.9 Ų85.942%0.41743%0.43SS..EExtended strand (participates in β ladder)trans-107.8144179.264.70000110.8Y88 Q100 T101 V102Y88-T90 HydrophobicContact CD2-CG2 4.38Å; T90-Q100 VanDerWaalsContact CB-OE1 3.27Å; T90-Q100 PolarHBondContact OG1-OE1 2.94Å; T90-T101 WeakPolarHBondContact CA-O 3.31Å; T90-V102 HydrophobicContact CG2-CB 4.49Å; T90-V102 HydrophobicContact CG2-CG1 4.24Å; T90-V102 HydrophobicContact CG2-CG2 4.04Å
91R89.3Confident89.4Confident166 Ų16677.7 Ų77.763%0.62640%0.399SS*.EExtended strand (participates in β ladder)trans-146134.6175.4-171.9174.7179.9170.51.1110.2M93 T101 F103R91-M93 HydrophobicContact CG-SD 4.1Å; R91-M93 PolarHBondContact O-N 3.33Å; R91-T101 PolarHBondContact N-O 2.8Å; R91-T101 WeakPolarHBondContact O-CB 3.34Å; R91-T101 PolarHBondContact O-N 3.43Å; R91-F103 HydrophobicContact CB-CD2 4.48Å; R91-F103 HydrophobicContact CB-CE2 4.04Å
92Q88.6Confident89.3Confident77 Ų7776.8 Ų76.836%0.3639%0.392SS..  trans-74.7113.8171.1-166.3664.300109.4R94 S95 E98Q92-R94 WeakPolarHBondContact CG-O 3.22Å; Q92-R94 PolarHBondContact NE2-O 3Å; Q92-S95 PolarHBondContact NE2-O 2.94Å; Q92-E98 PolarHBondContact NE2-O 2.9Å
93M86.5Confident89.3Confident104 Ų10473.8 Ų73.851%0.51238%0.375SS..  trans-103.6-15.6179.2-65-63.8-60.900112.6R91 T101 F103R91-M93 HydrophobicContact CG-SD 4.1Å; R91-M93 PolarHBondContact O-N 3.33Å; M93-T101 HydrophobicContact CG-CG2 4.45Å; M93-F103 HydrophobicContact CG-CE2 4.44Å; M93-F103 HydrophobicContact CG-CZ 4.39Å; M93-F103 HydrophobicContact SD-CZ 4.46Å
94R87.4Confident89.4Confident124 Ų12469.3 Ų69.347%0.46836%0.355SS..SBendtrans-128.7-172.5-171.3-57.1-175.8-172.8-1777.3111.3Q92 E98 D116Q92-R94 WeakPolarHBondContact CG-O 3.22Å; Q92-R94 PolarHBondContact NE2-O 3Å; R94-E98 HydrophobicContact CB-CB 4.11Å; R94-E98 HydrophobicContact CB-CG 4.36Å; R94-E98 WeakPolarHBondContact CD-OE2 3.4Å; R94-E98 IonicContact CZ-OE2 3.28Å; R94-E98 IonicContact NE-OE2 2.84Å; R94-E98 IonicContact NH1-OE2 3.65Å; R94-E98 PolarHBondContact NH1-OE2 3.12Å; R94-D116 IonicContact NH2-OD2 3.63Å; R94-D116 PolarHBondContact NH2-OD2 2.98Å; R94-D116 VanDerWaalsContact NH2-OD2 3.09Å
95S86.8Confident89.4Confident63 Ų6363.8 Ų63.844%0.44133%0.331SS..  trans-58.3159.517740.20000112Q92 D97 E98Q92-S95 PolarHBondContact NE2-O 2.94Å; S95-D97 VanDerWaalsContact CB-OD1 3.24Å; S95-D97 WeakPolarHBondContact CB-OD1 3.41Å; S95-D97 PolarHBondContact O-N 3.03Å; S95-D97 VanDerWaalsContact O-N 3.16Å; S95-D97 PolarHBondContact OG-OD1 3.17Å; S95-E98 PolarHBondContact O-N 3.21Å; S95-E98 VanDerWaalsContact O-N 3.14Å
96A81.9Confident89.5Confident104 Ų10463.6 Ų63.686%0.8633%0.329SS*.THydrogen-bonded Turntrans-67.8-10.9-176.500000114.4
97D88.1Confident89.4Confident139 Ų13966.4 Ų66.474%0.74334%0.343SS*.THydrogen-bonded Turntrans-82.7-14.9174.671.1-26.8000113.1S95S95-D97 VanDerWaalsContact CB-OD1 3.24Å; S95-D97 WeakPolarHBondContact CB-OD1 3.41Å; S95-D97 PolarHBondContact O-N 3.03Å; S95-D97 VanDerWaalsContact O-N 3.16Å; S95-D97 PolarHBondContact OG-OD1 3.17Å
98E84.7Confident89.2Confident78 Ų7871 Ų7136%0.36436%0.364SS..SBendtrans-94.8149.7178.1-60.6-168.7-129.400111.7Q92 R94 S95Q92-E98 PolarHBondContact NE2-O 2.9Å; R94-E98 HydrophobicContact CB-CB 4.11Å; R94-E98 HydrophobicContact CB-CG 4.36Å; R94-E98 WeakPolarHBondContact CD-OE2 3.4Å; R94-E98 IonicContact CZ-OE2 3.28Å; R94-E98 IonicContact NE-OE2 2.84Å; R94-E98 IonicContact NH1-OE2 3.65Å; R94-E98 PolarHBondContact NH1-OE2 3.12Å; S95-E98 PolarHBondContact O-N 3.21Å; S95-E98 VanDerWaalsContact O-N 3.14Å
99G84.8Confident89.1Confident38 Ų3868 Ų6839%0.39236%0.358SS..PPolyproline II helixtrans-60161175.900000113.2
100Q88.1Confident89.1Confident102 Ų10270 Ų7048%0.47736%0.362SS..PPolyproline II helixtrans-70.9140.3176-66.6-176.41.300110.6T90 S117T90-Q100 VanDerWaalsContact CB-OE1 3.27Å; T90-Q100 PolarHBondContact OG1-OE1 2.94Å; Q100-S117 WeakPolarHBondContact O-CB 3.47Å; Q100-S117 PolarHBondContact O-OG 2.76Å
101T91.5Very high89.3Confident2 Ų271.1 Ų71.11%0.01236%0.359CS..EExtended strand (participates in β ladder)trans-76.9130.6167.3-610000109.1T90 R91 M93 F103 K114 D116T90-T101 WeakPolarHBondContact CA-O 3.31Å; R91-T101 PolarHBondContact N-O 2.8Å; R91-T101 WeakPolarHBondContact O-CB 3.34Å; R91-T101 PolarHBondContact O-N 3.43Å; M93-T101 HydrophobicContact CG-CG2 4.45Å; T101-F103 HydrophobicContact CG2-CD2 4.04Å; T101-F103 HydrophobicContact CG2-CE1 4.33Å; T101-F103 HydrophobicContact CG2-CE2 3.47Å; T101-F103 VanDerWaalsContact CG2-CE2 3.47Å; T101-F103 HydrophobicContact CG2-CZ 3.66Å; T101-K114 HydrophobicContact CG2-CD 4.16Å; T101-K114 HydrophobicContact CG2-CG 3.62Å; T101-D116 WeakPolarHBondContact CG2-OD1 3.4Å; T101-D116 PolarHBondContact OG1-OD1 2.98Å
102V92Very high89.4Confident20 Ų2067.7 Ų67.712%0.12135%0.35CS..EExtended strand (participates in β ladder)trans-102.4132.4174.2-166.50000109.3Y88 T90 F104 E115Y88-V102 HydrophobicContact CD2-CG1 4.23Å; T90-V102 HydrophobicContact CG2-CB 4.49Å; T90-V102 HydrophobicContact CG2-CG1 4.24Å; T90-V102 HydrophobicContact CG2-CG2 4.04Å; V102-F104 HydrophobicContact CB-CE2 4.12Å; V102-F104 HydrophobicContact CB-CZ 4.15Å; V102-F104 HydrophobicContact CG1-CD1 4.47Å; V102-F104 HydrophobicContact CG1-CD2 4.43Å; V102-F104 HydrophobicContact CG1-CE1 3.83Å; V102-F104 HydrophobicContact CG1-CE2 3.78Å; V102-F104 HydrophobicContact CG1-CZ 3.44Å; V102-F104 VanDerWaalsContact CG1-CZ 3.44Å; V102-E115 PolarHBondContact N-O 3.15Å; V102-E115 PolarHBondContact O-N 3.19Å
103F92.3Very high89.6Confident29 Ų2965.3 Ų65.313%0.12734%0.339CS..EExtended strand (participates in β ladder)trans-114.1128175.7-66.8-90.9000109.6Y88 H89 R91 M93 T101 Q112 E113 K114Y88-F103 CarbonylContact C-O 3.58Å; Y88-F103 WeakPolarHBondContact CA-O 3.37Å; H89-F103 WeakPolarHBondContact CE1-CB 3.21Å; H89-F103 PolarHBondContact N-O 3.26Å; H89-F103 VanDerWaalsContact NE2-CB 3.34Å; H89-F103 WeakPolarHBondContact NE2-CB 3.41Å; H89-F103 AromaticContact NE2-CD2 3.87Å; H89-F103 AromaticContact NE2-CG 3.67Å; H89-F103 PolarHBondContact O-N 3.09Å; R91-F103 HydrophobicContact CB-CD2 4.48Å; R91-F103 HydrophobicContact CB-CE2 4.04Å; M93-F103 HydrophobicContact CG-CE2 4.44Å; M93-F103 HydrophobicContact CG-CZ 4.39Å; M93-F103 HydrophobicContact SD-CZ 4.46Å; T101-F103 HydrophobicContact CG2-CD2 4.04Å; T101-F103 HydrophobicContact CG2-CE1 4.33Å; T101-F103 HydrophobicContact CG2-CE2 3.47Å; T101-F103 VanDerWaalsContact CG2-CE2 3.47Å; T101-F103 HydrophobicContact CG2-CZ 3.66Å; F103-Q112 HydrophobicContact CD1-CG 4.45Å; F103-E113 CarbonylContact C-O 3.58Å; F103-E113 WeakPolarHBondContact CA-O 3.44Å; F103-K114 HydrophobicContact CD1-CB 4.3Å; F103-K114 HydrophobicContact CD1-CG 4.23Å; F103-K114 HydrophobicContact CE1-CB 4.26Å; F103-K114 HydrophobicContact CE1-CD 4.25Å; F103-K114 HydrophobicContact CE1-CG 3.85Å; F103-K114 HydrophobicContact CZ-CG 4.32Å
104F93Very high89.8Confident16 Ų1665.8 Ų65.87%0.0734%0.338CS..EExtended strand (participates in β ladder)trans-112123.4178.3-58.3-80000110.5I74 R76 M86 V87 Y88 V102 Q112 E113 E115I74-F104 HydrophobicContact CD1-CD1 3.64Å; I74-F104 HydrophobicContact CD1-CE1 3.45Å; I74-F104 VanDerWaalsContact CD1-CE1 3.45Å; R76-F104 VanDerWaalsContact NH1-CE2 3.32Å; M86-F104 HydrophobicContact CB-CB 4.37Å; M86-F104 HydrophobicContact CE-CB 3.64Å; M86-F104 WeakPolarHBondContact CE-O 3.45Å; M86-F104 HydrophobicContact SD-CB 4.15Å; V87-F104 CarbonylContact O-C 3.59Å; V87-F104 WeakPolarHBondContact O-CA 3.17Å; Y88-F104 HydrophobicContact CG-CE1 4.47Å; V102-F104 HydrophobicContact CB-CE2 4.12Å; V102-F104 HydrophobicContact CB-CZ 4.15Å; V102-F104 HydrophobicContact CG1-CD1 4.47Å; V102-F104 HydrophobicContact CG1-CD2 4.43Å; V102-F104 HydrophobicContact CG1-CE1 3.83Å; V102-F104 HydrophobicContact CG1-CE2 3.78Å; V102-F104 HydrophobicContact CG1-CZ 3.44Å; V102-F104 VanDerWaalsContact CG1-CZ 3.44Å; F104-Q112 CarbonylContact O-C 3.54Å; F104-Q112 VanDerWaalsContact O-CA 3.23Å; F104-Q112 WeakPolarHBondContact O-CA 3.44Å; F104-E113 HydrophobicContact CB-CB 4.35Å; F104-E113 PolarHBondContact N-O 2.7Å; F104-E113 PolarHBondContact O-N 2.78Å; F104-E115 HydrophobicContact CE2-CB 3.92Å
105T93.4Very high89.9Confident19 Ų1963.8 Ų63.812%0.11734%0.335CS..EExtended strand (participates in β ladder)trans-111.7122.4178-55.10000110.3L69 M86 V87 I107L69-T105 HydrophobicContact CD1-CG2 4.29Å; L69-T105 HydrophobicContact CD2-CG2 3.59Å; M86-T105 CarbonylContact C-O 3.53Å; M86-T105 VanDerWaalsContact CA-O 3.31Å; M86-T105 WeakPolarHBondContact CA-O 3.45Å; V87-T105 PolarHBondContact N-O 2.84Å; V87-T105 PolarHBondContact O-N 3.47Å; T105-I107 PolarHBondContact O-N 2.73Å
106C92.6Very high89.8Confident0 Ų064.2 Ų64.20%033%0.332CS..EExtended strand (participates in β ladder)trans-66.8130.4177.8179.80000111.7C78 M86 H108 C109 R110 Y111C78-C106 HydrophobicContact CB-CB 3.88Å; C78-C106 VanDerWaalsContact CB-SG 3.58Å; M86-C106 HydrophobicContact CE-CB 4.15Å; C106-H108 PolarHBondContact O-N 2.86Å; C106-H108 PolarHBondContact SG-N 3.31Å; C106-H108 VanDerWaalsContact SG-N 3.39Å; C106-C109 VanDerWaalsContact SG-SG 3.62Å; C106-R110 WeakPolarHBondContact O-CA 3.22Å; C106-R110 PolarHBondContact O-N 2.71Å; C106-Y111 PolarHBondContact N-O 2.73Å
107I90.9Very high89.1Confident59 Ų5965.1 Ų65.130%0.30333%0.332SS..THydrogen-bonded Turntrans-67.1-26.2178.870.4-177.5000113.2L69 V73 G85 V87 T105L69-I107 HydrophobicContact CD1-CB 4.11Å; L69-I107 HydrophobicContact CD1-CG2 3.87Å; V73-I107 HydrophobicContact CG2-CG2 4.45Å; G85-I107 WeakPolarHBondContact O-CG1 3.31Å; G85-I107 PolarHBondContact O-N 3.39Å; V87-I107 HydrophobicContact CG2-CG2 3.99Å; T105-I107 PolarHBondContact O-N 2.73Å
108H89.7Confident89.2Confident102 Ų10261.5 Ų61.547%0.47231%0.311SS..THydrogen-bonded Turntrans-94.2-38.9-172.5-59.6-83000114.2K83 E84 C106K83-H108 VanDerWaalsContact CB-CD2 3.44Å; K83-H108 WeakPolarHBondContact CB-CD2 3.23Å; K83-H108 HydrophobicContact CD-CB 3.62Å; E84-H108 PolarHBondContact O-CD2 2.9Å; E84-H108 PolarHBondContact O-NE2 2.83Å; C106-H108 PolarHBondContact O-N 2.86Å; C106-H108 PolarHBondContact SG-N 3.31Å; C106-H108 VanDerWaalsContact SG-N 3.39Å
109C90.7Very high89.4Confident39 Ų3960.6 Ų60.626%0.26431%0.309SS..THydrogen-bonded Turntrans-1212.2-175.173.30000113.9C78 C81 C106 Y111C78-C109 VanDerWaalsContact SG-SG 3.63Å; C81-C109 HydrophobicContact CB-CB 3.96Å; C81-C109 VanDerWaalsContact SG-SG 3.61Å; C106-C109 VanDerWaalsContact SG-SG 3.62Å; C109-Y111 PolarHBondContact O-N 2.64Å; C109-Y111 VanDerWaalsContact SG-CB 3.51Å
110R89.9Confident89.7Confident120 Ų12061.8 Ų61.845%0.45330%0.304SS..  trans56.116.3-179.7-51.1-57.3-172.7124.3-2.5114.6S67 L69 C106S67-R110 PolarHBondContact O-NH1 2.77Å; L69-R110 VanDerWaalsContact CD2-NH1 3.3Å; C106-R110 WeakPolarHBondContact O-CA 3.22Å; C106-R110 PolarHBondContact O-N 2.71Å
111Y92.5Very high89.8Confident92 Ų9259.5 Ų59.536%0.36129%0.294SS..  trans-68.3132.1172.9-176.4-110.2000110.3S79 R80 C106 C109 E113S79-Y111 WeakPolarHBondContact OG-CE1 3.36Å; R80-Y111 HydrophobicContact CB-CD1 3.96Å; R80-Y111 HydrophobicContact CB-CD2 4.46Å; R80-Y111 HydrophobicContact CB-CE1 4.48Å; R80-Y111 HydrophobicContact CB-CG 3.94Å; C106-Y111 PolarHBondContact N-O 2.73Å; C109-Y111 PolarHBondContact O-N 2.64Å; C109-Y111 VanDerWaalsContact SG-CB 3.51Å; Y111-E113 HydrophobicContact CD1-CG 3.88Å; Y111-E113 HydrophobicContact CE1-CG 3.52Å
112Q91.6Very high89.7Confident95 Ų9563.1 Ų63.144%0.44431%0.311SS..EExtended strand (participates in β ladder)trans-106.9129.1-179.5-168.5178.922.800110.5H89 F103 F104H89-Q112 PolarHBondContact CE1-NE2 2.93Å; H89-Q112 VanDerWaalsContact CE1-NE2 3.33Å; F103-Q112 HydrophobicContact CD1-CG 4.45Å; F104-Q112 CarbonylContact O-C 3.54Å; F104-Q112 VanDerWaalsContact O-CA 3.23Å; F104-Q112 WeakPolarHBondContact O-CA 3.44Å
113E92.5Very high89.5Confident27 Ų2765.9 Ų65.913%0.12632%0.324CS..EExtended strand (participates in β ladder)trans-108.1142.8173.5-65.9173.3-170.700109.1R76 S79 M86 F103 F104 Y111R76-E113 IonicContact NE-OE2 3.37Å; R76-E113 IonicContact NH2-OE2 3.6Å; S79-E113 VanDerWaalsContact CB-OE1 3.23Å; S79-E113 WeakPolarHBondContact CB-OE1 3.4Å; S79-E113 PolarHBondContact N-OE1 2.86Å; S79-E113 PolarHBondContact OG-OE1 3.47Å; M86-E113 HydrophobicContact CE-CG 4.23Å; F103-E113 CarbonylContact C-O 3.58Å; F103-E113 WeakPolarHBondContact CA-O 3.44Å; F104-E113 HydrophobicContact CB-CB 4.35Å; F104-E113 PolarHBondContact N-O 2.7Å; F104-E113 PolarHBondContact O-N 2.78Å; Y111-E113 HydrophobicContact CD1-CG 3.88Å; Y111-E113 HydrophobicContact CE1-CG 3.52Å
114K92.1Very high89.3Confident113 Ų11368.6 Ų68.649%0.49134%0.338SS..EExtended strand (participates in β ladder)trans-113.2129.7176.9-175.3-167179.9-129.90109T101 F103 D116T101-K114 HydrophobicContact CG2-CD 4.16Å; T101-K114 HydrophobicContact CG2-CG 3.62Å; F103-K114 HydrophobicContact CD1-CB 4.3Å; F103-K114 HydrophobicContact CD1-CG 4.23Å; F103-K114 HydrophobicContact CE1-CB 4.26Å; F103-K114 HydrophobicContact CE1-CD 4.25Å; F103-K114 HydrophobicContact CE1-CG 3.85Å; F103-K114 HydrophobicContact CZ-CG 4.32Å; K114-D116 WeakPolarHBondContact CE-OD1 3.47Å; K114-D116 VanDerWaalsContact NZ-CG 3.25Å; K114-D116 IonicContact NZ-OD1 2.8Å; K114-D116 PolarHBondContact NZ-OD1 2.67Å; K114-D116 IonicContact NZ-OD2 2.83Å; K114-D116 PolarHBondContact NZ-OD2 3.37Å
115E89Confident89Confident83 Ų8372.6 Ų72.639%0.38836%0.359SS..EExtended strand (participates in β ladder)trans-126123.6174.9-161.8169.7123.900108.7R76 V102 F104R76-E115 IonicContact CZ-OE2 2.89Å; R76-E115 VanDerWaalsContact CZ-OE2 3.28Å; R76-E115 IonicContact NH1-OE2 3.62Å; R76-E115 PolarHBondContact NH1-OE2 2.69Å; R76-E115 IonicContact NH2-OE2 3.42Å; R76-E115 PolarHBondContact NH2-OE2 3.18Å; V102-E115 PolarHBondContact N-O 3.15Å; V102-E115 PolarHBondContact O-N 3.19Å; F104-E115 HydrophobicContact CE2-CB 3.92Å
116D84.1Confident88.7Confident72 Ų7277.1 Ų77.139%0.38538%0.379SS..EExtended strand (participates in β ladder)trans-93.6123.3174.7-69.6-38.8000107.4R94 T101 K114R94-D116 IonicContact NH2-OD2 3.63Å; R94-D116 PolarHBondContact NH2-OD2 2.98Å; R94-D116 VanDerWaalsContact NH2-OD2 3.09Å; T101-D116 WeakPolarHBondContact CG2-OD1 3.4Å; T101-D116 PolarHBondContact OG1-OD1 2.98Å; K114-D116 WeakPolarHBondContact CE-OD1 3.47Å; K114-D116 VanDerWaalsContact NZ-CG 3.25Å; K114-D116 IonicContact NZ-OD1 2.8Å; K114-D116 PolarHBondContact NZ-OD1 2.67Å; K114-D116 IonicContact NZ-OD2 2.83Å; K114-D116 PolarHBondContact NZ-OD2 3.37Å
117S68.3Low88.3Confident123 Ų12384.1 Ų84.186%0.8641%0.413SS*.  trans-86.20-180-490000112.5Q100Q100-S117 WeakPolarHBondContact O-CB 3.47Å; Q100-S117 PolarHBondContact O-OG 2.76Å

Retrieved 117 of 117 residues in 116.8 ms (Link to these results)