A0A061ACS6_CAEEL Loading...

Pre-mRNA-splicing factor RBM22

AlphaFold DB , UniProt , Accession A0A061ACS6, Species CAEEL (Caenorhabditis elegans), Gene rbm-22, Length 56 aa.

						>A0A061ACS6_CAEEL|A0A061ACS6|rbm-22
MPRPPAPPTFAAPRSLVVPNVRPVKAGESSGASSSSSIYYPSQDPTRLGAKGDVIE
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	76.6	Confident	85.3	Confident	234 Å²	234	142 Å²	142	100%	1.153	82%	0.82	S	S	*	*				0	131.9	0	-66.1	169.6	72.3	0	0	108.1
2	P	86.3	Confident	85.4	Confident	129 Å²	129	137.6 Å²	137.6	84%	0.838	81%	0.813	S	S	*	*	P	Polyproline II helix	trans	-68	146.1	176.3	26	-28.3	0	0	0	110.3
3	R	85.5	Confident	85.4	Confident	232 Å²	232	133.7 Å²	133.7	88%	0.875	79%	0.793	S	S	*	*	P	Polyproline II helix	trans	-71.1	137.9	179.2	-165.5	-179.7	-69.3	176.9	-0.9	109
4	P	87.3	Confident	85.7	Confident	105 Å²	105	142.6 Å²	142.6	68%	0.682	81%	0.806	S	S	*	*	P	Polyproline II helix	trans	-59.7	149.1	175.1	22.3	-31.6	0	0	0	111
5	P	88.4	Confident	85.8	Confident	124 Å²	124	139.5 Å²	139.5	81%	0.805	80%	0.797	S	S	*	*	P	Polyproline II helix	trans	-61.8	148.8	179.6	24.9	-32.4	0	0	0	111.3
6	A	86.8	Confident	85.6	Confident	94 Å²	94	139.3 Å²	139.3	78%	0.777	79%	0.792	S	S	*	*	P	Polyproline II helix	trans	-66	143.7	179.2	0	0	0	0	0	111
7	P	87.3	Confident	85.8	Confident	106 Å²	106	139.6 Å²	139.6	69%	0.688	80%	0.797	S	S	*	*	P	Polyproline II helix	trans	-67	150.7	178	27.8	-33.6	0	0	0	111.2	T9	P7-T9 PolarHBondContact O-N 3.08Å
8	P	86.3	Confident	85.7	Confident	130 Å²	130	138 Å²	138	84%	0.844	79%	0.79	S	S	*	*	P	Polyproline II helix	trans	-61.3	134.7	175.8	26.3	-33.4	0	0	0	110.2
9	T	85.4	Confident	85.6	Confident	138 Å²	138	135.9 Å²	135.9	85%	0.847	78%	0.782	S	S	*	*	P	Polyproline II helix	trans	-89.4	124.6	177.6	-42.6	0	0	0	0	109.5	P7	P7-T9 PolarHBondContact O-N 3.08Å
10	F	83	Confident	85.3	Confident	187 Å²	187	137.1 Å²	137.1	82%	0.82	79%	0.786	S	S	*	*	P	Polyproline II helix	trans	-81.6	120.6	172.4	-171.4	-98.3	0	0	0	109.5
11	A	86	Confident	84.9	Confident	83 Å²	83	136 Å²	136	69%	0.686	78%	0.781	S	S	*	*	P	Polyproline II helix	trans	-72.4	130.6	176.5	0	0	0	0	0	110.2
12	A	85.6	Confident	85	Confident	89 Å²	89	135.2 Å²	135.2	74%	0.736	77%	0.766	S	S	*	*	P	Polyproline II helix	trans	-66.7	141.4	177.1	0	0	0	0	0	111	R14	A12-R14 PolarHBondContact O-N 3.26Å
13	P	85.4	Confident	84.3	Confident	87 Å²	87	135.2 Å²	135.2	57%	0.565	77%	0.765	S	S	*	*	P	Polyproline II helix	trans	-64.6	134.5	176.4	24.6	-31.1	0	0	0	110.8	S15 L16	P13-S15 VanDerWaalsContact C-N 3.27Å; P13-S15 PolarHBondContact O-N 3.39Å; P13-L16 HydrophobicContact CB-CD2 4.46Å; P13-L16 HydrophobicContact CG-CD2 4.03Å
14	R	89.5	Confident	83.3	Confident	258 Å²	258	130 Å²	130	97%	0.974	76%	0.759	S	S	*	*	S	Bend	trans	-68.8	-24.9	-178.1	-176.2	170.8	174.5	-171.8	-2.1	113.3	A12	A12-R14 PolarHBondContact O-N 3.26Å
15	S	87.9	Confident	82	Confident	96 Å²	96	132.5 Å²	132.5	67%	0.671	76%	0.759	S	S	*	*			trans	-155	151.6	175.5	56.7	0	0	0	0	110.4	P13	P13-S15 VanDerWaalsContact C-N 3.27Å; P13-S15 PolarHBondContact O-N 3.39Å
16	L	82.1	Confident	80.6	Confident	136 Å²	136	132.1 Å²	132.1	71%	0.712	77%	0.766	S	S	*	*			trans	-108.2	126.2	171.1	-63.1	175.6	0	0	0	108	P13 V18	P13-L16 HydrophobicContact CB-CD2 4.46Å; P13-L16 HydrophobicContact CG-CD2 4.03Å; L16-V18 HydrophobicContact CB-CG2 4.23Å; L16-V18 PolarHBondContact O-N 3.34Å; L16-V18 VanDerWaalsContact O-N 3.17Å
17	V	88.8	Confident	79.2	Confident	145 Å²	145	131.3 Å²	131.3	88%	0.879	77%	0.767	S	S	*	*			trans	-78.1	101.2	171.3	-179.5	0	0	0	0	107.1
18	V	85.1	Confident	77.4	Confident	111 Å²	111	132.7 Å²	132.7	67%	0.673	76%	0.764	S	S	*	*			trans	-99.4	123.5	176	-174.8	0	0	0	0	108.1	L16 N20	L16-V18 HydrophobicContact CB-CG2 4.23Å; L16-V18 PolarHBondContact O-N 3.34Å; L16-V18 VanDerWaalsContact O-N 3.17Å; V18-N20 PolarHBondContact O-N 3.1Å
19	P	83.3	Confident	75.6	Confident	98 Å²	98	131.5 Å²	131.5	64%	0.636	76%	0.759	S	S	*	*			trans	-55.3	133.4	170.6	-23.2	33.2	0	0	0	109.8	V21	P19-V21 PolarHBondContact O-N 3.42Å
20	N	79.9	Confident	74	Confident	160 Å²	160	131.3 Å²	131.3	86%	0.856	76%	0.764	S	S	*	*			trans	-73.3	80.7	175.5	-171.2	12.9	0	0	0	109.5	V18	V18-N20 PolarHBondContact O-N 3.1Å
21	V	77.2	Confident	72.6	Confident	114 Å²	114	125.5 Å²	125.5	69%	0.691	76%	0.757	S	S	*	*			trans	-81.5	115.1	170.9	-73.7	0	0	0	0	107.9	P19	P19-V21 PolarHBondContact O-N 3.42Å
22	R	77.8	Confident	71.3	Confident	218 Å²	218	126.1 Å²	126.1	82%	0.823	76%	0.762	S	S	*	*			trans	-55.2	135.7	169.4	-66.9	-176.7	-179.7	-171.1	0.2	107.6	V24	R22-V24 PolarHBondContact O-N 3.49Å
23	P	71.8	Confident	69.8	Low	128 Å²	128	128 Å²	128	83%	0.831	77%	0.769	S	S	*	*			trans	-55.9	112.4	174.2	-20.1	30.2	0	0	0	108.2	K25	P23-K25 PolarHBondContact O-N 2.97Å
24	V	64.8	Low	68.4	Low	124 Å²	124	129.6 Å²	129.6	75%	0.752	78%	0.782	S	S	*	*			trans	-68.1	116	167.5	-176	0	0	0	0	104.5	R22 A26	R22-V24 PolarHBondContact O-N 3.49Å; V24-A26 PolarHBondContact O-N 3.15Å; V24-A26 VanDerWaalsContact O-N 3.09Å
25	K	60.3	Low	67	Low	157 Å²	157	122 Å²	122	68%	0.683	77%	0.769	S	S	*	*			trans	-52.3	122.7	170	-93.8	-170.4	175.8	179.2	0	107.2	P23 G27 E28	P23-K25 PolarHBondContact O-N 2.97Å; K25-G27 VanDerWaalsContact C-N 3.29Å; K25-G27 PolarHBondContact O-N 3.15Å; K25-E28 VanDerWaalsContact O-N 3.11Å; K25-E28 PolarHBondContact O-N 2.63Å
26	A	59.3	Low	65.8	Low	115 Å²	115	123 Å²	123	95%	0.95	78%	0.776	S	S	*	*	T	Hydrogen-bonded Turn	trans	-59.7	97.5	168.2	0	0	0	0	0	107.5	V24	V24-A26 PolarHBondContact O-N 3.15Å; V24-A26 VanDerWaalsContact O-N 3.09Å
27	G	56.8	Low	65.1	Low	77 Å²	77	121.3 Å²	121.3	79%	0.794	78%	0.775	S	S	*	*	T	Hydrogen-bonded Turn	trans	134.8	-11.2	-176.9	0	0	0	0	0	115.9	K25 S29	K25-G27 VanDerWaalsContact C-N 3.29Å; K25-G27 PolarHBondContact O-N 3.15Å; G27-S29 PolarHBondContact O-N 3.15Å; G27-S29 VanDerWaalsContact O-N 3.15Å
28	E	48.9	Very low	64.7	Low	135 Å²	135	119.8 Å²	119.8	63%	0.631	76%	0.761	S	S	*	*			trans	-78.9	103.6	166.9	-125.2	136.3	142.5	0	0	107.6	K25 S30	K25-E28 VanDerWaalsContact O-N 3.11Å; K25-E28 PolarHBondContact O-N 2.63Å; E28-S30 PolarHBondContact O-N 2.73Å
29	S	49.5	Very low	64.5	Low	106 Å²	106	121.1 Å²	121.1	74%	0.741	76%	0.755	S	S	*	*			trans	-42	132.9	166.1	43.5	0	0	0	0	108.3	G27 G31	G27-S29 PolarHBondContact O-N 3.15Å; G27-S29 VanDerWaalsContact O-N 3.15Å; S29-G31 PolarHBondContact O-N 2.87Å
30	S	51.7	Low	64.3	Low	134 Å²	134	122.2 Å²	122.2	94%	0.937	75%	0.748	S	S	*	*			trans	-64.2	56.7	173.1	33.4	0	0	0	0	111.1	E28 A32	E28-S30 PolarHBondContact O-N 2.73Å; S30-A32 PolarHBondContact O-N 2.8Å
31	G	53.6	Low	64.3	Low	65 Å²	65	117.9 Å²	117.9	67%	0.67	73%	0.728	S	S	*	*			trans	-89.5	87.2	174	0	0	0	0	0	109.5	S29	S29-G31 PolarHBondContact O-N 2.87Å
32	A	58.2	Low	64.2	Low	96 Å²	96	116.7 Å²	116.7	79%	0.793	73%	0.725	S	S	*	*			trans	68.3	111.4	156.7	0	0	0	0	0	117.9	S30	S30-A32 PolarHBondContact O-N 2.8Å
33	S	54.9	Low	64.2	Low	127 Å²	127	111.4 Å²	111.4	89%	0.888	71%	0.709	S	S	*	*	S	Bend		-176.3	139.7	95.9	-166.5	0	0	0	0	112.2
34	S	55.4	Low	64.4	Low	121 Å²	121	106.9 Å²	106.9	85%	0.846	68%	0.678	S	S	*	*			trans	85.6	59.6	177.4	-150	0	0	0	0	117.5
35	S	58.9	Low	64.8	Low	98 Å²	98	106 Å²	106	69%	0.685	68%	0.675	S	S	*	*			trans	-122.6	124.7	145.9	164.5	0	0	0	0	105.4	S37	S35-S37 PolarHBondContact O-N 3.02Å
36	S	63.5	Low	65.5	Low	118 Å²	118	104.2 Å²	104.2	83%	0.825	68%	0.678	S	S	*	*			trans	-63.8	79.8	167.2	54.7	0	0	0	0	107.9	I38	S36-I38 PolarHBondContact O-N 3.37Å; S36-I38 VanDerWaalsContact O-N 3.08Å
37	S	68.2	Low	65.9	Low	100 Å²	100	107.2 Å²	107.2	70%	0.699	66%	0.664	S	S	*	*			trans	-75.8	103.6	-177.1	58.6	0	0	0	0	107.7	S35 Y39	S35-S37 PolarHBondContact O-N 3.02Å; S37-Y39 PolarHBondContact O-N 3.21Å
38	I	79.9	Confident	66.2	Low	114 Å²	114	109.1 Å²	109.1	59%	0.585	66%	0.655	S	S	*	*	P	Polyproline II helix	trans	-61.5	122.5	168.3	-61.5	175.6	0	0	0	107	S36 Y40	S36-I38 PolarHBondContact O-N 3.37Å; S36-I38 VanDerWaalsContact O-N 3.08Å; I38-Y40 HydrophobicContact CB-CE2 4.05Å; I38-Y40 HydrophobicContact CG2-CE1 4.39Å; I38-Y40 HydrophobicContact CG2-CE2 4.06Å; I38-Y40 VanDerWaalsContact O-CD2 3.29Å; I38-Y40 WeakPolarHBondContact O-CD2 3.21Å; I38-Y40 PolarHBondContact O-N 3.42Å
39	Y	79.8	Confident	67	Low	139 Å²	139	104.5 Å²	104.5	55%	0.545	64%	0.644	S	S	.	*	P	Polyproline II helix	trans	-72.7	118.3	173.4	174.8	-98.6	0	0	0	109.1	S37 D44	S37-Y39 PolarHBondContact O-N 3.21Å; Y39-D44 WeakPolarHBondContact OH-CB 3.39Å; Y39-D44 VanDerWaalsContact OH-OD2 3.1Å; Y39-D44 VanDerWaalsContact OH-CG 3.3Å; Y39-D44 PolarHBondContact OH-OD2 2.66Å
40	Y	80.8	Confident	68	Low	121 Å²	121	102.9 Å²	102.9	48%	0.475	64%	0.637	S	S	.	*	P	Polyproline II helix	trans	-97.4	132.5	169.6	-65.6	-86.9	0	0	0	108.8	I38 S42 Q43	I38-Y40 HydrophobicContact CB-CE2 4.05Å; I38-Y40 HydrophobicContact CG2-CE1 4.39Å; I38-Y40 HydrophobicContact CG2-CE2 4.06Å; I38-Y40 VanDerWaalsContact O-CD2 3.29Å; I38-Y40 WeakPolarHBondContact O-CD2 3.21Å; I38-Y40 PolarHBondContact O-N 3.42Å; Y40-S42 PolarHBondContact O-N 3.06Å; Y40-Q43 WeakPolarHBondContact O-CA 3.29Å; Y40-Q43 VanDerWaalsContact O-CB 3.25Å; Y40-Q43 WeakPolarHBondContact O-CB 3.25Å; Y40-Q43 PolarHBondContact O-N 3.15Å
41	P	78.2	Confident	68.5	Low	68 Å²	68	107.1 Å²	107.1	44%	0.442	64%	0.639	S	S	.	*	G	3₁₀ helix	trans	-58.4	-20.2	178.3	-27	35	0	0	0	114.7	Q43 D44 R47	P41-Q43 PolarHBondContact O-N 3.43Å; P41-D44 WeakPolarHBondContact O-CB 3.36Å; P41-D44 PolarHBondContact O-N 2.8Å; P41-R47 VanDerWaalsContact CB-NH1 3.33Å
42	S	75.7	Confident	68.9	Low	89 Å²	89	107.3 Å²	107.3	62%	0.622	64%	0.641	S	S	*	*	G	3₁₀ helix	trans	-71.3	-12.3	171.5	54.3	0	0	0	0	113.9	Y40 L48	Y40-S42 PolarHBondContact O-N 3.06Å; S42-L48 WeakPolarHBondContact O-CD1 3.18Å
43	Q	77.3	Confident	69.3	Low	107 Å²	107	108.6 Å²	108.6	50%	0.5	63%	0.634	S	S	.	*	G	3₁₀ helix	trans	-93.9	-2.2	175.5	-61.1	173.2	-29.4	0	0	112.2	Y40 P41 P45	Y40-Q43 WeakPolarHBondContact O-CA 3.29Å; Y40-Q43 VanDerWaalsContact O-CB 3.25Å; Y40-Q43 WeakPolarHBondContact O-CB 3.25Å; Y40-Q43 PolarHBondContact O-N 3.15Å; P41-Q43 PolarHBondContact O-N 3.43Å; Q43-P45 WeakPolarHBondContact O-CD 3.47Å
44	D	77.3	Confident	69.6	Low	34 Å²	34	109 Å²	109	18%	0.182	63%	0.631	C	S	.	*			trans	-65.4	114.4	175.1	-165.8	-26.5	0	0	0	109.7	Y39 P41 T46 R47 L48	Y39-D44 WeakPolarHBondContact OH-CB 3.39Å; Y39-D44 VanDerWaalsContact OH-OD2 3.1Å; Y39-D44 VanDerWaalsContact OH-CG 3.3Å; Y39-D44 PolarHBondContact OH-OD2 2.66Å; P41-D44 WeakPolarHBondContact O-CB 3.36Å; P41-D44 PolarHBondContact O-N 2.8Å; D44-T46 PolarHBondContact OD1-N 2.81Å; D44-T46 PolarHBondContact OD2-OG1 3.15Å; D44-T46 PolarHBondContact OD1-OG1 2.92Å; D44-T46 VanDerWaalsContact O-N 3.15Å; D44-T46 PolarHBondContact O-N 3.3Å; D44-T46 WeakPolarHBondContact OD1-CB 3.46Å; D44-R47 HydrophobicContact CB-CB 4.03Å; D44-R47 HydrophobicContact CB-CG 3.82Å; D44-R47 PolarHBondContact O-N 3.2Å; D44-L48 PolarHBondContact O-N 3.35Å; D44-L48 VanDerWaalsContact O-N 3.15Å
45	P	71.7	Confident	70	Confident	104 Å²	104	111.1 Å²	111.1	68%	0.675	63%	0.631	S	S	*	*	T	Hydrogen-bonded Turn	trans	-60	-26.6	178.2	-19.9	32.8	0	0	0	112.2	Q43 R47	Q43-P45 WeakPolarHBondContact O-CD 3.47Å; P45-R47 VanDerWaalsContact C-N 3.29Å; P45-R47 PolarHBondContact O-N 3.09Å
46	T	75.6	Confident	69.9	Low	121 Å²	121	119 Å²	119	74%	0.742	66%	0.657	S	S	*	*	T	Hydrogen-bonded Turn	trans	-73.7	-21.4	177.7	69	0	0	0	0	112.7	D44	D44-T46 PolarHBondContact OD1-N 2.81Å; D44-T46 PolarHBondContact OD2-OG1 3.15Å; D44-T46 PolarHBondContact OD1-OG1 2.92Å; D44-T46 VanDerWaalsContact O-N 3.15Å; D44-T46 PolarHBondContact O-N 3.3Å; D44-T46 WeakPolarHBondContact OD1-CB 3.46Å
47	R	67.1	Low	70.2	Confident	177 Å²	177	119.1 Å²	119.1	67%	0.668	65%	0.649	S	S	*	*	T	Hydrogen-bonded Turn	trans	-95.4	-20.4	177.2	-63.2	-172.7	68.5	-173	2.6	113.8	P41 D44 P45 G49	P41-R47 VanDerWaalsContact CB-NH1 3.33Å; D44-R47 HydrophobicContact CB-CB 4.03Å; D44-R47 HydrophobicContact CB-CG 3.82Å; D44-R47 PolarHBondContact O-N 3.2Å; P45-R47 VanDerWaalsContact C-N 3.29Å; P45-R47 PolarHBondContact O-N 3.09Å; R47-G49 PolarHBondContact O-N 3.11Å
48	L	64	Low	70.3	Confident	117 Å²	117	120.1 Å²	120.1	61%	0.613	65%	0.646	S	S	*	*	S	Bend	trans	-73.5	-0.1	-178	-85.8	153.7	0	0	0	113.9	S42 D44	S42-L48 WeakPolarHBondContact O-CD1 3.18Å; D44-L48 PolarHBondContact O-N 3.35Å; D44-L48 VanDerWaalsContact O-N 3.15Å
49	G	66.1	Low	69.8	Low	38 Å²	38	120.4 Å²	120.4	39%	0.392	65%	0.65	S	S	.	*			trans	63.3	171.5	-175.4	0	0	0	0	0	111.9	R47	R47-G49 PolarHBondContact O-N 3.11Å
50	A	70.1	Confident	69.2	Low	72 Å²	72	119.3 Å²	119.3	60%	0.595	66%	0.656	S	S	*	*	S	Bend	trans	-66.2	149.9	166	0	0	0	0	0	108.8	G52 D53	A50-G52 PolarHBondContact O-N 2.81Å; A50-D53 PolarHBondContact O-N 3.17Å; A50-D53 VanDerWaalsContact O-N 3.15Å
51	K	61.9	Low	68.5	Low	224 Å²	224	119.2 Å²	119.2	97%	0.974	67%	0.667	S	S	*	*	T	Hydrogen-bonded Turn	trans	-54.7	101.4	171.1	-73	-96.1	-176.4	178.4	0	108.7
52	G	62.6	Low	67.8	Low	69 Å²	69	122.6 Å²	122.6	71%	0.711	68%	0.682	S	S	*	*	T	Hydrogen-bonded Turn	trans	124.6	-2.4	178.4	0	0	0	0	0	116.6	A50 V54	A50-G52 PolarHBondContact O-N 2.81Å; G52-V54 PolarHBondContact O-N 3.39Å
53	D	66.1	Low	67.3	Low	122 Å²	122	125 Å²	125	65%	0.652	69%	0.686	S	S	*	*			trans	-68.7	104.7	169.4	-90.9	-21.3	0	0	0	109.6	A50 I55	A50-D53 PolarHBondContact O-N 3.17Å; A50-D53 VanDerWaalsContact O-N 3.15Å; D53-I55 PolarHBondContact O-N 3.47Å
54	V	60.6	Low	66.5	Low	137 Å²	137	126.4 Å²	126.4	83%	0.83	70%	0.701	S	S	*	*			trans	-73.8	117.6	169.4	177.6	0	0	0	0	106.9	G52 E56	G52-V54 PolarHBondContact O-N 3.39Å; V54-E56 PolarHBondContact O-N 3.43Å
55	I	64.3	Low	65.6	Low	165 Å²	165	134.1 Å²	134.1	85%	0.846	74%	0.744	S	S	*	*			trans	-73.4	118.9	171.2	-18.2	174.6	0	0	0	106.7	D53	D53-I55 PolarHBondContact O-N 3.47Å
56	E	57	Low	65	Low	263 Å²	263	136.8 Å²	136.8	100%	1.229	75%	0.75	S	S	*	*			trans	-66.2	0	173.6	-172.9	179.2	-175.5	0	0	112.1	V54	V54-E56 PolarHBondContact O-N 3.43Å

Retrieved 56 of 56 residues in 17.1 ms (Link to these results)

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