A0A061ACT8_CAEEL Loading...

NADH dehydrogenase subunit 1

AlphaFold DB , UniProt , Accession A0A061ACT8, Species CAEEL (Caenorhabditis elegans), Gene ugt-65, Length 25 aa.

						>A0A061ACT8_CAEEL|A0A061ACT8|ugt-65
MNHLQYLNLDIFLVILVILFIVSKF
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	61.3	Low	78.1	Confident	216 Å²	216	129.8 Å²	129.8	100%	1.064	64%	0.642	S	S	*	*				0	121.4	0	-80	176.1	160.3	0	107.2	H3	M1-H3 PolarHBondContact O-N 3.27Å
2	N	69	Low	79.4	Confident	110 Å²	110	130.5 Å²	130.5	59%	0.588	64%	0.639	S	S	*	*			trans	-65	107.4	-168.9	-79	-4.8	0	0	110.9	L4 Q5	N2-L4 PolarHBondContact O-N 3.23Å; N2-L4 VanDerWaalsContact O-N 3.14Å; N2-Q5 HydrophobicContact CB-CB 3.96Å; N2-Q5 PolarHBondContact O-N 3.29Å; N2-Q5 VanDerWaalsContact O-CB 3.26Å; N2-Q5 WeakPolarHBondContact O-CB 3.28Å
3	H	68.3	Low	80.5	Confident	166 Å²	166	128.2 Å²	128.2	77%	0.769	63%	0.63	S	S	*	*	H	α-helix	trans	-56	-27.4	174.5	-143.4	-59.6	0	0	112.3	M1 Q5 L7	M1-H3 PolarHBondContact O-N 3.27Å; H3-Q5 VanDerWaalsContact C-N 3.32Å; H3-L7 PolarHBondContact O-N 3.08Å
4	L	73.6	Confident	81.6	Confident	139 Å²	139	124.8 Å²	124.8	73%	0.728	62%	0.62	S	S	*	*	H	α-helix	trans	-66.2	-30.7	173	-65.9	171.5	0	0	113.1	N2 N8	N2-L4 PolarHBondContact O-N 3.23Å; N2-L4 VanDerWaalsContact O-N 3.14Å; L4-N8 WeakPolarHBondContact O-CB 3.34Å; L4-N8 PolarHBondContact O-N 3.46Å; L4-N8 VanDerWaalsContact O-N 3.13Å
5	Q	76.6	Confident	82.6	Confident	136 Å²	136	122.5 Å²	122.5	64%	0.636	61%	0.61	S	S	*	*	H	α-helix	trans	-76.8	-35.7	-177.3	-142.8	173	-11	0	111.3	N2 H3 N8 L9	N2-Q5 HydrophobicContact CB-CB 3.96Å; N2-Q5 PolarHBondContact O-N 3.29Å; N2-Q5 VanDerWaalsContact O-CB 3.26Å; N2-Q5 WeakPolarHBondContact O-CB 3.28Å; H3-Q5 VanDerWaalsContact C-N 3.32Å; Q5-N8 PolarHBondContact O-N 3.48Å; Q5-L9 VanDerWaalsContact O-N 3.13Å; Q5-L9 PolarHBondContact O-N 3.38Å
6	Y	80.1	Confident	83.4	Confident	152 Å²	152	121 Å²	121	60%	0.596	60%	0.604	S	S	*	*	H	α-helix	trans	-64.3	-48.6	171.6	-87.4	-86	0	0	111.5	N8 L9 D10	Y6-N8 VanDerWaalsContact C-N 3.25Å; Y6-N8 PolarHBondContact O-N 3.02Å; Y6-L9 PolarHBondContact O-N 2.99Å; Y6-L9 VanDerWaalsContact O-N 3.07Å; Y6-D10 PolarHBondContact O-N 3.4Å
7	L	81.3	Confident	84.1	Confident	106 Å²	106	118.4 Å²	118.4	56%	0.555	60%	0.595	S	S	*	*	H	α-helix	trans	-59.1	-37.2	177.7	-169.7	119.2	0	0	112.4	H3 I11	H3-L7 PolarHBondContact O-N 3.08Å; L7-I11 PolarHBondContact O-N 3.01Å; L7-I11 WeakPolarHBondContact O-CG1 3.46Å; L7-I11 VanDerWaalsContact O-CG1 3.25Å; L7-I11 HydrophobicContact CG-CD1 4.2Å; L7-I11 HydrophobicContact CD2-CD1 3.77Å; L7-I11 WeakPolarHBondContact O-CD1 3.43Å
8	N	84.8	Confident	84.8	Confident	111 Å²	111	117.1 Å²	117.1	59%	0.594	59%	0.59	S	S	*	*	H	α-helix	trans	-71	-33.6	178.1	-151.1	-0.2	0	0	112.5	L4 Q5 Y6 F12	L4-N8 WeakPolarHBondContact O-CB 3.34Å; L4-N8 PolarHBondContact O-N 3.46Å; L4-N8 VanDerWaalsContact O-N 3.13Å; Q5-N8 PolarHBondContact O-N 3.48Å; Y6-N8 VanDerWaalsContact C-N 3.25Å; Y6-N8 PolarHBondContact O-N 3.02Å; N8-F12 WeakPolarHBondContact O-CB 3.41Å; N8-F12 PolarHBondContact O-N 3.34Å
9	L	86.4	Confident	85.4	Confident	113 Å²	113	117.1 Å²	117.1	59%	0.592	59%	0.591	S	S	*	*	H	α-helix	trans	-70.9	-39.4	177.5	-162.3	149.2	0	0	111.6	Q5 Y6 F12 L13	Q5-L9 VanDerWaalsContact O-N 3.13Å; Q5-L9 PolarHBondContact O-N 3.38Å; Y6-L9 PolarHBondContact O-N 2.99Å; Y6-L9 VanDerWaalsContact O-N 3.07Å; L9-F12 PolarHBondContact O-N 3.24Å; L9-L13 PolarHBondContact O-N 3.5Å
10	D	86	Confident	85.9	Confident	97 Å²	97	118.9 Å²	118.9	52%	0.519	60%	0.595	S	S	.	*	H	α-helix	trans	-63.1	-45.5	174.9	-67	-42.9	0	0	111.5	Y6 F12 L13 V14	Y6-D10 PolarHBondContact O-N 3.4Å; D10-F12 PolarHBondContact O-N 2.97Å; D10-L13 PolarHBondContact O-N 2.97Å; D10-V14 PolarHBondContact O-N 3.3Å; D10-V14 VanDerWaalsContact O-N 3.08Å; D10-V14 WeakPolarHBondContact O-CG2 3.32Å
11	I	92.3	Very high	86.4	Confident	82 Å²	82	117.6 Å²	117.6	42%	0.421	59%	0.589	S	S	.	*	H	α-helix	trans	-62.6	-43.9	177.7	-67.7	165.2	0	0	111	L7 L13 V14 I15	L7-I11 PolarHBondContact O-N 3.01Å; L7-I11 WeakPolarHBondContact O-CG1 3.46Å; L7-I11 VanDerWaalsContact O-CG1 3.25Å; L7-I11 HydrophobicContact CG-CD1 4.2Å; L7-I11 HydrophobicContact CD2-CD1 3.77Å; L7-I11 WeakPolarHBondContact O-CD1 3.43Å; I11-L13 VanDerWaalsContact C-N 3.32Å; I11-L13 PolarHBondContact O-N 3.05Å; I11-V14 PolarHBondContact O-N 3.43Å; I11-I15 HydrophobicContact CG2-CD1 3.76Å; I11-I15 HydrophobicContact CG2-CG1 4.46Å; I11-I15 VanDerWaalsContact O-CG1 3.31Å; I11-I15 WeakPolarHBondContact O-CG1 3.42Å; I11-I15 PolarHBondContact O-N 3.42Å
12	F	93.2	Very high	88	Confident	138 Å²	138	111.9 Å²	111.9	61%	0.605	57%	0.566	S	S	*	*	H	α-helix	trans	-59.8	-42.8	177.4	179.7	-98.3	0	0	112.1	N8 L9 D10 I15 L16	N8-F12 WeakPolarHBondContact O-CB 3.41Å; N8-F12 PolarHBondContact O-N 3.34Å; L9-F12 PolarHBondContact O-N 3.24Å; D10-F12 PolarHBondContact O-N 2.97Å; F12-I15 PolarHBondContact O-N 3.02Å; F12-L16 PolarHBondContact O-N 3.44Å; F12-L16 WeakPolarHBondContact O-CB 3.36Å
13	L	94.4	Very high	89.1	Confident	100 Å²	100	111.4 Å²	111.4	52%	0.524	57%	0.571	S	S	.	*	H	α-helix	trans	-64.7	-41.3	179	-171.7	128.2	0	0	111.9	L9 D10 I11 L16 V17	L9-L13 PolarHBondContact O-N 3.5Å; D10-L13 PolarHBondContact O-N 2.97Å; I11-L13 VanDerWaalsContact C-N 3.32Å; I11-L13 PolarHBondContact O-N 3.05Å; L13-L16 PolarHBondContact O-N 3.43Å; L13-V17 WeakPolarHBondContact O-CG2 3.4Å; L13-V17 PolarHBondContact O-N 3.3Å
14	V	95.5	Very high	89.6	Confident	81 Å²	81	112 Å²	112	49%	0.491	57%	0.571	S	S	.	*	H	α-helix	trans	-62.2	-46.2	175.7	172.6	0	0	0	111.1	D10 I11 L16 V17 I18	D10-V14 PolarHBondContact O-N 3.3Å; D10-V14 VanDerWaalsContact O-N 3.08Å; D10-V14 WeakPolarHBondContact O-CG2 3.32Å; I11-V14 PolarHBondContact O-N 3.43Å; V14-L16 VanDerWaalsContact C-N 3.3Å; V14-L16 PolarHBondContact O-N 3.02Å; V14-V17 PolarHBondContact O-N 2.94Å; V14-I18 HydrophobicContact CG1-CD1 3.85Å; V14-I18 VanDerWaalsContact O-CG1 3.32Å; V14-I18 WeakPolarHBondContact O-CG1 3.37Å; V14-I18 PolarHBondContact O-N 3.36Å
15	I	95.9	Very high	89.7	Confident	91 Å²	91	116.4 Å²	116.4	47%	0.467	59%	0.585	S	S	.	*	H	α-helix	trans	-60.2	-43.4	177.4	-67.3	165.8	0	0	110.5	I11 F12 V17 I18 L19	I11-I15 HydrophobicContact CG2-CD1 3.76Å; I11-I15 HydrophobicContact CG2-CG1 4.46Å; I11-I15 VanDerWaalsContact O-CG1 3.31Å; I11-I15 WeakPolarHBondContact O-CG1 3.42Å; I11-I15 PolarHBondContact O-N 3.42Å; F12-I15 PolarHBondContact O-N 3.02Å; I15-V17 PolarHBondContact O-N 2.92Å; I15-I18 PolarHBondContact O-N 3.05Å; I15-L19 WeakPolarHBondContact O-CB 3.44Å; I15-L19 PolarHBondContact O-N 3.32Å
16	L	95.8	Very high	90.3	Very high	98 Å²	98	115.5 Å²	115.5	51%	0.513	58%	0.583	S	S	.	*	H	α-helix	trans	-61.4	-42.9	178.9	-174.5	67.4	0	0	112.1	F12 L13 V14 L19 F20	F12-L16 PolarHBondContact O-N 3.44Å; F12-L16 WeakPolarHBondContact O-CB 3.36Å; L13-L16 PolarHBondContact O-N 3.43Å; V14-L16 VanDerWaalsContact C-N 3.3Å; V14-L16 PolarHBondContact O-N 3.02Å; L16-L19 PolarHBondContact O-N 3.08Å; L16-F20 WeakPolarHBondContact O-CB 3.26Å; L16-F20 PolarHBondContact O-N 3.32Å
17	V	96.2	Very high	90.9	Very high	76 Å²	76	113.5 Å²	113.5	46%	0.461	58%	0.582	S	S	.	*	H	α-helix	trans	-63.9	-43.8	176.9	170.7	0	0	0	111.1	L13 V14 I15 L19 F20 I21	L13-V17 WeakPolarHBondContact O-CG2 3.4Å; L13-V17 PolarHBondContact O-N 3.3Å; V14-V17 PolarHBondContact O-N 2.94Å; I15-V17 PolarHBondContact O-N 2.92Å; V17-L19 VanDerWaalsContact C-N 3.34Å; V17-L19 PolarHBondContact O-N 3.04Å; V17-F20 PolarHBondContact O-N 3.07Å; V17-I21 VanDerWaalsContact O-CG1 3.28Å; V17-I21 WeakPolarHBondContact O-CG1 3.31Å; V17-I21 PolarHBondContact O-N 3.13Å; V17-I21 HydrophobicContact CG1-CD1 3.83Å
18	I	96.6	Very high	91.4	Very high	96 Å²	96	113.9 Å²	113.9	49%	0.492	58%	0.584	S	S	.	*	H	α-helix	trans	-61.2	-45.7	176.9	-67.1	165.8	0	0	110.3	V14 I15 F20 I21 V22	V14-I18 HydrophobicContact CG1-CD1 3.85Å; V14-I18 VanDerWaalsContact O-CG1 3.32Å; V14-I18 WeakPolarHBondContact O-CG1 3.37Å; V14-I18 PolarHBondContact O-N 3.36Å; I15-I18 PolarHBondContact O-N 3.05Å; I18-F20 VanDerWaalsContact C-N 3.31Å; I18-F20 PolarHBondContact O-N 3.13Å; I18-I21 PolarHBondContact O-N 3.19Å; I18-V22 HydrophobicContact CG2-CG2 4.42Å; I18-V22 WeakPolarHBondContact O-CG2 3.39Å; I18-V22 PolarHBondContact O-N 3.48Å
19	L	96.3	Very high	91.8	Very high	117 Å²	117	114.1 Å²	114.1	61%	0.613	58%	0.583	S	S	*	*	H	α-helix	trans	-61.2	-41.4	-180	-142.5	109.7	0	0	111.7	I15 L16 V17 V22 S23	I15-L19 WeakPolarHBondContact O-CB 3.44Å; I15-L19 PolarHBondContact O-N 3.32Å; L16-L19 PolarHBondContact O-N 3.08Å; V17-L19 VanDerWaalsContact C-N 3.34Å; V17-L19 PolarHBondContact O-N 3.04Å; L19-V22 PolarHBondContact O-N 3.26Å; L19-S23 WeakPolarHBondContact O-CB 3.25Å; L19-S23 PolarHBondContact O-N 3.5Å
20	F	95.4	Very high	92.1	Very high	153 Å²	153	114.2 Å²	114.2	67%	0.671	58%	0.583	S	S	*	*	H	α-helix	trans	-65.2	-40.4	177.4	-175.6	-99.6	0	0	112.5	L16 V17 I18	L16-F20 WeakPolarHBondContact O-CB 3.26Å; L16-F20 PolarHBondContact O-N 3.32Å; V17-F20 PolarHBondContact O-N 3.07Å; I18-F20 VanDerWaalsContact C-N 3.31Å; I18-F20 PolarHBondContact O-N 3.13Å
21	I	95.4	Very high	92.5	Very high	91 Å²	91	115.3 Å²	115.3	47%	0.467	59%	0.587	S	S	.	*	H	α-helix	trans	-64.9	-46.1	176.2	-68.3	164.3	0	0	110.5	V17 I18 S23 K24 F25	V17-I21 VanDerWaalsContact O-CG1 3.28Å; V17-I21 WeakPolarHBondContact O-CG1 3.31Å; V17-I21 PolarHBondContact O-N 3.13Å; V17-I21 HydrophobicContact CG1-CD1 3.83Å; I18-I21 PolarHBondContact O-N 3.19Å; I21-S23 PolarHBondContact O-N 3.05Å; I21-K24 PolarHBondContact O-N 3.32Å; I21-F25 HydrophobicContact CG2-CE2 4.28Å; I21-F25 WeakPolarHBondContact O-CD2 3.4Å
22	V	95.2	Very high	92.6	Very high	96 Å²	96	117.7 Å²	117.7	58%	0.582	60%	0.599	S	S	*	*	H	α-helix	trans	-63.7	-41.5	-179.8	171.9	0	0	0	111.3	I18 L19 K24 F25	I18-V22 HydrophobicContact CG2-CG2 4.42Å; I18-V22 WeakPolarHBondContact O-CG2 3.39Å; I18-V22 PolarHBondContact O-N 3.48Å; L19-V22 PolarHBondContact O-N 3.26Å; V22-K24 PolarHBondContact O-N 2.86Å; V22-K24 VanDerWaalsContact O-N 3.08Å; V22-F25 PolarHBondContact O-N 3.14Å
23	S	91.9	Very high	92.5	Very high	101 Å²	101	116.2 Å²	116.2	71%	0.706	60%	0.598	S	S	*	*	T	Hydrogen-bonded Turn	trans	-65	-11.6	179	-174.4	0	0	0	114.3	L19 I21	L19-S23 WeakPolarHBondContact O-CB 3.25Å; L19-S23 PolarHBondContact O-N 3.5Å; I21-S23 PolarHBondContact O-N 3.05Å
24	K	79.3	Confident	92.3	Very high	177 Å²	177	117.5 Å²	117.5	77%	0.77	60%	0.604	S	S	*	*	T	Hydrogen-bonded Turn	trans	-91.1	-14.9	-178.5	-176.2	171.2	175.5	171	113.1	I21 V22	I21-K24 PolarHBondContact O-N 3.32Å; V22-K24 PolarHBondContact O-N 2.86Å; V22-K24 VanDerWaalsContact O-N 3.08Å
25	F	74.6	Confident	92.1	Very high	233 Å²	233	120.8 Å²	120.8	100%	1.022	62%	0.615	S	S	*	*			trans	-94.1	0	172.8	-72.8	-81.7	0	0	110.8	I21 V22	I21-F25 HydrophobicContact CG2-CE2 4.28Å; I21-F25 WeakPolarHBondContact O-CD2 3.4Å; V22-F25 PolarHBondContact O-N 3.14Å

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