A0A061IL49_CRIGR Loading...

Beta-defensin

Has antibacterial activity.

AlphaFold DB , UniProt , Accession A0A061IL49, Species CRIGR (Cricetulus griseus, Chinese hamster), Gene LOC100770098, Length 73 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M60.1Low63.2Low200 Ų200131.5 Ų131.599%0.98564%0.637SS**  0-31.20-63.7-175.6-175.600113.8T3 F5M1-T3 PolarHBondContact O-N 3.47Å; M1-F5 WeakPolarHBondContact O-CD2 3.38Å
2K62Low62.9Low172 Ų172132.1 Ų132.175%0.74864%0.635SS**Hα-helixtrans-69.6-30.7-176-157.5127.5106.3160.40115F6K2-F6 HydrophobicContact CG-CE2 4.24Å; K2-F6 WeakPolarHBondContact O-CD2 3Å
3T64.1Low62.5Low93 Ų93134.9 Ų134.957%0.57164%0.643SS**Hα-helixtrans-67.9-33.5-178.842.70000114.1M1 F5 F6 F7M1-T3 PolarHBondContact O-N 3.47Å; T3-F5 VanDerWaalsContact C-N 3.34Å; T3-F5 PolarHBondContact O-N 3.46Å; T3-F6 PolarHBondContact O-N 3.39Å; T3-F7 WeakPolarHBondContact O-CD2 3.4Å; T3-F7 PolarHBondContact O-N 3.4Å
4F62.5Low62Low154 Ų154134.1 Ų134.168%0.67564%0.644SS**Hα-helixtrans-65.2-36.2179.1-74.3-80.4000112.9F6 F7 F8F4-F6 VanDerWaalsContact C-N 3.34Å; F4-F6 PolarHBondContact O-N 2.92Å; F4-F7 PolarHBondContact O-N 3.32Å; F4-F8 PolarHBondContact O-N 3.09Å; F4-F8 VanDerWaalsContact O-N 3.12Å
5F63Low61.6Low157 Ų157129.7 Ų129.769%0.68963%0.632SS**Hα-helixtrans-66.3-36.1176.3-70-76.5000112.4M1 T3 F8 A9M1-F5 WeakPolarHBondContact O-CD2 3.38Å; T3-F5 VanDerWaalsContact C-N 3.34Å; T3-F5 PolarHBondContact O-N 3.46Å; F5-F8 PolarHBondContact O-N 3.01Å; F5-A9 PolarHBondContact O-N 3.43Å
6F62.8Low61.1Low142 Ų142126.4 Ų126.462%0.62362%0.624SS**Hα-helixtrans-65.9-41.4175.6-85.2-81.9000112.1K2 T3 F4 A9 V10K2-F6 HydrophobicContact CG-CE2 4.24Å; K2-F6 WeakPolarHBondContact O-CD2 3Å; T3-F6 PolarHBondContact O-N 3.39Å; F4-F6 VanDerWaalsContact C-N 3.34Å; F4-F6 PolarHBondContact O-N 2.92Å; F6-A9 PolarHBondContact O-N 3.44Å; F6-V10 WeakPolarHBondContact O-CG2 3.49Å; F6-V10 PolarHBondContact O-N 3.27Å
7F62.9Low60.9Low149 Ų149123.5 Ų123.565%0.65462%0.624SS**Hα-helixtrans-62.9-42.6175.5-91.8-84000112.5T3 F4 V10 L11T3-F7 WeakPolarHBondContact O-CD2 3.4Å; T3-F7 PolarHBondContact O-N 3.4Å; F4-F7 PolarHBondContact O-N 3.32Å; F7-V10 PolarHBondContact O-N 3.4Å; F7-L11 WeakPolarHBondContact O-CG 3.07Å; F7-L11 PolarHBondContact O-N 3.45Å; F7-L11 VanDerWaalsContact O-N 3.09Å
8F62.1Low60.6Low134 Ų134124.5 Ų124.559%0.58862%0.624SS**Hα-helixtrans-62.7-44.4177-112.1-99.7000111.9F4 F5 V10 L11 F12F4-F8 PolarHBondContact O-N 3.09Å; F4-F8 VanDerWaalsContact O-N 3.12Å; F5-F8 PolarHBondContact O-N 3.01Å; F8-V10 PolarHBondContact O-N 3.05Å; F8-L11 PolarHBondContact O-N 3.12Å; F8-F12 AromaticContact CD1-CD2 3.71Å; F8-F12 HydrophobicContact CD1-CD2 3.71Å; F8-F12 AromaticContact CD1-CE2 3.29Å; F8-F12 HydrophobicContact CD1-CE2 3.29Å; F8-F12 HydrophobicContact CD1-CZ 4.3Å; F8-F12 HydrophobicContact CE1-CD2 4.26Å; F8-F12 AromaticContact CE1-CE2 3.4Å; F8-F12 HydrophobicContact CE1-CE2 3.4Å; F8-F12 HydrophobicContact CE1-CZ 4.16Å; F8-F12 HydrophobicContact CG-CE2 4.44Å; F8-F12 WeakPolarHBondContact O-CB 3.11Å; F8-F12 VanDerWaalsContact O-CD2 3.26Å; F8-F12 WeakPolarHBondContact O-CD2 3.32Å; F8-F12 PolarHBondContact O-N 3.24Å
9A67.1Low60.5Low41 Ų41121.7 Ų121.734%0.33961%0.611SS.*Hα-helixtrans-57.8-49177.500000111.5F5 F6 L11 F12 F13F5-A9 PolarHBondContact O-N 3.43Å; F6-A9 PolarHBondContact O-N 3.44Å; A9-L11 PolarHBondContact O-N 3.38Å; A9-F12 PolarHBondContact O-N 3.18Å; A9-F13 HydrophobicContact CB-CD2 4.42Å; A9-F13 HydrophobicContact CB-CE2 4.49Å; A9-F13 WeakPolarHBondContact O-CB 3.33Å; A9-F13 WeakPolarHBondContact O-CD2 3.47Å; A9-F13 PolarHBondContact O-N 3.5Å
10V65.9Low60.8Low88 Ų88119 Ų11953%0.53361%0.609SS.*Hα-helixtrans-60.9-43.3179.7176.50000111.7F6 F7 F8 F13 L14F6-V10 WeakPolarHBondContact O-CG2 3.49Å; F6-V10 PolarHBondContact O-N 3.27Å; F7-V10 PolarHBondContact O-N 3.4Å; F8-V10 PolarHBondContact O-N 3.05Å; V10-F13 PolarHBondContact O-N 3.28Å; V10-L14 HydrophobicContact CG1-CD1 3.74Å; V10-L14 WeakPolarHBondContact O-CD1 3.26Å; V10-L14 PolarHBondContact O-N 3.44Å
11L63.3Low61.1Low116 Ų116119.7 Ų119.761%0.60761%0.608SS**Hα-helixtrans-65.5-39.3178.2-69.7168.4000112.7F7 F8 A9 L14 S15F7-L11 WeakPolarHBondContact O-CG 3.07Å; F7-L11 PolarHBondContact O-N 3.45Å; F7-L11 VanDerWaalsContact O-N 3.09Å; F8-L11 PolarHBondContact O-N 3.12Å; A9-L11 PolarHBondContact O-N 3.38Å; L11-L14 PolarHBondContact O-N 3.5Å; L11-S15 PolarHBondContact O-N 3.46Å
12F59.7Low61.7Low139 Ų139114.3 Ų114.361%0.6158%0.579SS**Hα-helixtrans-71.1-34.1176.8-88-100.1000112.6F8 A9 P16F8-F12 AromaticContact CD1-CD2 3.71Å; F8-F12 HydrophobicContact CD1-CD2 3.71Å; F8-F12 AromaticContact CD1-CE2 3.29Å; F8-F12 HydrophobicContact CD1-CE2 3.29Å; F8-F12 HydrophobicContact CD1-CZ 4.3Å; F8-F12 HydrophobicContact CE1-CD2 4.26Å; F8-F12 AromaticContact CE1-CE2 3.4Å; F8-F12 HydrophobicContact CE1-CE2 3.4Å; F8-F12 HydrophobicContact CE1-CZ 4.16Å; F8-F12 HydrophobicContact CG-CE2 4.44Å; F8-F12 WeakPolarHBondContact O-CB 3.11Å; F8-F12 VanDerWaalsContact O-CD2 3.26Å; F8-F12 WeakPolarHBondContact O-CD2 3.32Å; F8-F12 PolarHBondContact O-N 3.24Å; A9-F12 PolarHBondContact O-N 3.18Å; F12-P16 WeakPolarHBondContact O-CD 3.49Å
13F57.4Low62.5Low169 Ų169109.8 Ų109.874%0.74156%0.563SS**Hα-helixtrans-77-19.2174.6-78-69.4000114A9 V10 P16A9-F13 HydrophobicContact CB-CD2 4.42Å; A9-F13 HydrophobicContact CB-CE2 4.49Å; A9-F13 WeakPolarHBondContact O-CB 3.33Å; A9-F13 WeakPolarHBondContact O-CD2 3.47Å; A9-F13 PolarHBondContact O-N 3.5Å; V10-F13 PolarHBondContact O-N 3.28Å; F13-P16 WeakPolarHBondContact O-CD 3.47Å
14L55Low63.4Low124 Ų124108.2 Ų108.265%0.64956%0.559SS**Hα-helixtrans-83.3-21.4171.1-95.785.7000113.8V10 L11V10-L14 HydrophobicContact CG1-CD1 3.74Å; V10-L14 WeakPolarHBondContact O-CD1 3.26Å; V10-L14 PolarHBondContact O-N 3.44Å; L11-L14 PolarHBondContact O-N 3.5Å
15S56.6Low64.4Low67 Ų67106.4 Ų106.447%0.46955%0.551SS.*THydrogen-bonded Turntrans-63.9-28.6177.8-159.50000116.8L11 A17 K18L11-S15 PolarHBondContact O-N 3.46Å; S15-A17 PolarHBondContact O-N 3.15Å; S15-A17 VanDerWaalsContact O-N 3.15Å; S15-K18 PolarHBondContact O-N 3.31Å
16P53.6Low65.5Low78 Ų7898.9 Ų98.951%0.50652%0.518SS..Hα-helixtrans-65.8-21-175.2-1629.3000114.3F12 F13 K18F12-P16 WeakPolarHBondContact O-CD 3.49Å; F13-P16 WeakPolarHBondContact O-CD 3.47Å; P16-K18 PolarHBondContact O-N 2.95Å
17A56.7Low66.6Low76 Ų7697.3 Ų97.363%0.62852%0.516SS*.Hα-helixtrans-74.1-27.6-174.900000113.6S15 N19S15-A17 PolarHBondContact O-N 3.15Å; S15-A17 VanDerWaalsContact O-N 3.15Å; A17-N19 VanDerWaalsContact C-N 3.33Å
18K56.8Low67.8Low142 Ų14299.2 Ų99.262%0.61752%0.524SS*.Hα-helixtrans-71.3-32.5-178.6-66.8-68.3-177174.80111.7S15 P16 F21 F22S15-K18 PolarHBondContact O-N 3.31Å; P16-K18 PolarHBondContact O-N 2.95Å; K18-F21 PolarHBondContact O-N 3.46Å; K18-F22 HydrophobicContact CB-CE2 4.18Å; K18-F22 WeakPolarHBondContact O-CD2 3.34Å; K18-F22 WeakPolarHBondContact O-CE2 3.42Å
19N58.6Low68.8Low72 Ų7296.9 Ų96.939%0.38552%0.517SS..Hα-helixtrans-67-50.5-171.3-68.6-41.5000111.9A17 F21 Q48A17-N19 VanDerWaalsContact C-N 3.33Å; N19-F21 VanDerWaalsContact C-N 3.29Å; N19-F21 PolarHBondContact O-N 3.46Å; N19-Q48 VanDerWaalsContact C-CD 3.47Å; N19-Q48 HydrophobicContact CB-CG 4.26Å; N19-Q48 WeakPolarHBondContact O-CG 3.48Å; N19-Q48 PolarHBondContact O-NE2 2.81Å
20A65Low69.8Low67 Ų6799.6 Ų99.655%0.55453%0.526SS*.Hα-helixtrans-69.9-24.8-178.400000113.7A24A20-A24 PolarHBondContact O-N 3.13Å
21F67.6Low70.8Confident134 Ų13496.1 Ų96.159%0.58851%0.508SS*.Hα-helixtrans-70.6-36.2-174.6-173.1-98.5000113.4K18 N19 K25K18-F21 PolarHBondContact O-N 3.46Å; N19-F21 VanDerWaalsContact C-N 3.29Å; N19-F21 PolarHBondContact O-N 3.46Å; F21-K25 WeakPolarHBondContact O-CB 3.49Å; F21-K25 PolarHBondContact O-N 3.3Å
22F74.1Confident72.1Confident87 Ų8795.9 Ų95.938%0.38250%0.499SS..Hα-helixtrans-69.8-36.8-177.1-72.5-63.7000113K18 K25 C26 L46K18-F22 HydrophobicContact CB-CE2 4.18Å; K18-F22 WeakPolarHBondContact O-CD2 3.34Å; K18-F22 WeakPolarHBondContact O-CE2 3.42Å; F22-K25 PolarHBondContact O-N 2.83Å; F22-C26 PolarHBondContact O-N 3.07Å; F22-L46 WeakPolarHBondContact CB-O 3.29Å
23D77.4Confident73.6Confident77 Ų7791.2 Ų91.241%0.41248%0.483SS..Hα-helixtrans-68.3-46.2177.6-158-8.9000110.8K25 C26 N27D23-K25 VanDerWaalsContact C-N 3.29Å; D23-K25 PolarHBondContact O-N 2.95Å; D23-C26 PolarHBondContact O-N 3.43Å; D23-C26 VanDerWaalsContact O-N 3.13Å; D23-N27 WeakPolarHBondContact O-CB 2.99Å; D23-N27 PolarHBondContact O-N 2.89Å
24A82.9Confident75.2Confident60 Ų6083.7 Ų83.750%0.49645%0.452SS..Hα-helixtrans-59.5-38.8175.800000112.7A20 K28A20-A24 PolarHBondContact O-N 3.13Å; A24-K28 WeakPolarHBondContact O-CB 2.94Å; A24-K28 PolarHBondContact O-N 2.93Å
25K83.1Confident76.9Confident115 Ų11583.1 Ų83.150%0.545%0.45SS..Hα-helixtrans-67.2-41.4175.8-171.3-179.7179.4-172.50112F21 F22 D23 K28 L29F21-K25 WeakPolarHBondContact O-CB 3.49Å; F21-K25 PolarHBondContact O-N 3.3Å; F22-K25 PolarHBondContact O-N 2.83Å; D23-K25 VanDerWaalsContact C-N 3.29Å; D23-K25 PolarHBondContact O-N 2.95Å; K25-K28 PolarHBondContact O-N 2.75Å; K25-L29 WeakPolarHBondContact O-CG 3.09Å; K25-L29 PolarHBondContact O-N 3.31Å
26C87.2Confident78.5Confident0 Ų087.7 Ų87.70%046%0.458CS..Hα-helixtrans-63.5-46.3176.7-172.30000111.3F22 D23 K28 L29 N30 G31 C53F22-C26 PolarHBondContact O-N 3.07Å; D23-C26 PolarHBondContact O-N 3.43Å; D23-C26 VanDerWaalsContact O-N 3.13Å; C26-K28 PolarHBondContact O-N 2.92Å; C26-L29 PolarHBondContact O-N 3.48Å; C26-L29 VanDerWaalsContact O-N 3.1Å; C26-N30 PolarHBondContact O-N 2.9Å; C26-G31 WeakPolarHBondContact O-CA 3.44Å; C26-G31 PolarHBondContact O-N 3.14Å; C26-G31 VanDerWaalsContact SG-C 3.56Å; C26-C53 WeakPolarHBondContact CA-SG 2.94Å; C26-C53 HydrophobicContact CB-CB 3.82Å; C26-C53 WeakPolarHBondContact CB-SG 3.35Å; C26-C53 VanDerWaalsContact SG-CA 3.57Å; C26-C53 WeakPolarHBondContact SG-CB 3.49Å; C26-C53 CovalentContact SG-SG 2.02Å; C26-C53 PolarHBondContact SG-SG 3.34Å
27N85.1Confident80.3Confident109 Ų10985.5 Ų85.558%0.58345%0.445SS*.Hα-helixtrans-62.5-41177.6-167.2-4.7000111.9D23 L29 N30D23-N27 WeakPolarHBondContact O-CB 2.99Å; D23-N27 PolarHBondContact O-N 2.89Å; N27-L29 PolarHBondContact O-N 3.48Å; N27-L29 VanDerWaalsContact O-N 3.14Å; N27-N30 PolarHBondContact O-N 3.48Å
28K87.6Confident81.8Confident188 Ų18887.5 Ų87.582%0.81744%0.439SS*.Hα-helixtrans-59.9-26.2175.1-171.5175.3-177.8-179.50113.6A24 K25 C26 N30A24-K28 WeakPolarHBondContact O-CB 2.94Å; A24-K28 PolarHBondContact O-N 2.93Å; K25-K28 PolarHBondContact O-N 2.75Å; C26-K28 PolarHBondContact O-N 2.92Å; K28-N30 VanDerWaalsContact C-N 3.33Å
29L84.8Confident83.2Confident86 Ų8690.9 Ų90.945%0.4545%0.454SS..THydrogen-bonded Turntrans-88.94.4176.1-66.4169.1000112.6K25 C26 N27 G31 L55K25-L29 WeakPolarHBondContact O-CG 3.09Å; K25-L29 PolarHBondContact O-N 3.31Å; C26-L29 PolarHBondContact O-N 3.48Å; C26-L29 VanDerWaalsContact O-N 3.1Å; N27-L29 PolarHBondContact O-N 3.48Å; N27-L29 VanDerWaalsContact O-N 3.14Å; L29-G31 PolarHBondContact O-N 3.1Å; L29-L55 HydrophobicContact CB-CD1 3.96Å; L29-L55 WeakPolarHBondContact O-CD1 3.01Å
30N86.8Confident84.5Confident98 Ų9893.4 Ų93.452%0.52447%0.467SS..THydrogen-bonded Turntrans55.630.8-166.7-65.9-36.6000113.6C26 N27 K28 Y70C26-N30 PolarHBondContact O-N 2.9Å; N27-N30 PolarHBondContact O-N 3.48Å; K28-N30 VanDerWaalsContact C-N 3.33Å; N30-Y70 VanDerWaalsContact CG-OH 3.23Å; N30-Y70 WeakPolarHBondContact ND2-CE2 3.29Å; N30-Y70 PolarHBondContact ND2-OH 2.9Å; N30-Y70 PolarHBondContact OD1-OH 3.32Å
31G88.4Confident85.6Confident15 Ų1591.5 Ų91.516%0.15545%0.447CS..PPolyproline II helixtrans-84.8153.6175.200000112.4C26 L29 C54C26-G31 WeakPolarHBondContact O-CA 3.44Å; C26-G31 PolarHBondContact O-N 3.14Å; C26-G31 VanDerWaalsContact SG-C 3.56Å; L29-G31 PolarHBondContact O-N 3.1Å; G31-C54 CarbonylContact C-O 3.59Å; G31-C54 WeakPolarHBondContact CA-O 3.4Å
32R89.9Confident86.6Confident110 Ų11090.1 Ų90.142%0.41544%0.442SS..EExtended strand (participates in β ladder)trans-102.9126.6173.7-172.9-174.983.7141.44.7110.5A34 C54R32-A34 PolarHBondContact O-N 2.03Å; R32-C54 PolarHBondContact N-O 2.91Å; R32-C54 PolarHBondContact O-N 2.02Å
33C90.6Very high87.4Confident41 Ų4190.4 Ų90.428%0.27745%0.447SS..EExtended strand (participates in β ladder)trans-77.5117.1169.2-61.90000110.8C47 L51 K52C33-C47 HydrophobicContact CB-CB 3.64Å; C33-C47 WeakPolarHBondContact CB-SG 3.04Å; C33-C47 WeakPolarHBondContact SG-CB 3.33Å; C33-C47 CovalentContact SG-SG 2.03Å; C33-C47 PolarHBondContact SG-SG 3.08Å; C33-L51 HydrophobicContact CB-CB 4.48Å; C33-L51 HydrophobicContact CB-CD1 4.43Å; C33-K52 CarbonylContact C-O 3.58Å; C33-K52 VanDerWaalsContact CA-O 3.29Å; C33-K52 WeakPolarHBondContact CA-O 3.33Å
34A90.8Very high87.9Confident11 Ų1189.4 Ų89.49%0.09144%0.444CS..EExtended strand (participates in β ladder)trans-145.5161.7-179.900000112.2R32 Y36 K52R32-A34 PolarHBondContact O-N 2.03Å; A34-Y36 WeakPolarHBondContact CB-O 2.99Å; A34-Y36 PolarHBondContact O-N 3.05Å; A34-K52 PolarHBondContact N-O 2.77Å; A34-K52 WeakPolarHBondContact O-CA 2.98Å; A34-K52 WeakPolarHBondContact O-CB 3.44Å; A34-K52 PolarHBondContact O-N 3.2Å
35N91.4Very high88Confident113 Ų11387.7 Ų87.760%0.60443%0.43SS*.SBendtrans-65-31.4174-83.6-33.3000112.4L51 K52N35-L51 WeakPolarHBondContact OD1-CD2 3.19Å; N35-K52 PolarHBondContact O-NZ 3.33Å
36Y90.6Very high88.2Confident162 Ų16287.2 Ų87.264%0.63543%0.432SS*.SBendtrans-142.8146.8178.161.6-91.3000110.3A34A34-Y36 WeakPolarHBondContact CB-O 2.99Å; A34-Y36 PolarHBondContact O-N 3.05Å
37C90.3Very high88.1Confident33 Ų3387.6 Ų87.622%0.22344%0.435CS..  trans-86.3146.1172.4-54.90000109.8E41 C54C37-E41 HydrophobicContact CB-CB 4.01Å; C37-C54 WeakPolarHBondContact CA-SG 3.34Å; C37-C54 HydrophobicContact CB-CB 3.66Å; C37-C54 WeakPolarHBondContact CB-SG 3.47Å; C37-C54 PolarHBondContact N-SG 3.4Å; C37-C54 VanDerWaalsContact SG-CA 3.55Å; C37-C54 WeakPolarHBondContact SG-CB 3.44Å; C37-C54 CovalentContact SG-SG 2.04Å; C37-C54 PolarHBondContact SG-SG 2.79Å
38K89.8Confident88Confident118 Ų11885.7 Ų85.751%0.51342%0.422SS..  trans-72166.3174.1-62.3178.6-176.11710110.4N40 E41K38-N40 PolarHBondContact O-N 2.82Å; K38-N40 VanDerWaalsContact O-N 3.17Å; K38-E41 HydrophobicContact CB-CB 4.37Å; K38-E41 HydrophobicContact CB-CG 4.03Å; K38-E41 PolarHBondContact N-OE2 3.44Å; K38-E41 PolarHBondContact O-N 2.78Å
39K86.3Confident87.7Confident213 Ų21385.3 Ų85.393%0.92642%0.421SS*.THydrogen-bonded Turntrans-58.3-28.2178.2-73.9-174.9175.5-177.90114.2E41K39-E41 VanDerWaalsContact C-N 3.33Å
40N84.5Confident87.5Confident124 Ų12486.4 Ų86.466%0.66344%0.435SS*.THydrogen-bonded Turntrans-9712.4178.8-53.1-11.5000111.7K38 V57K38-N40 PolarHBondContact O-N 2.82Å; K38-N40 VanDerWaalsContact O-N 3.17Å; N40-V57 PolarHBondContact O-N 2.84Å
41E88.6Confident87.6Confident28 Ų2884 Ų8413%0.13142%0.422CS..EExtended strand (participates in β ladder)trans-122.2144.3179.2-65.5169.6178.700110C37 K38 K39 C54 L55C37-E41 HydrophobicContact CB-CB 4.01Å; K38-E41 HydrophobicContact CB-CB 4.37Å; K38-E41 HydrophobicContact CB-CG 4.03Å; K38-E41 PolarHBondContact N-OE2 3.44Å; K38-E41 PolarHBondContact O-N 2.78Å; K39-E41 VanDerWaalsContact C-N 3.33Å; E41-C54 HydrophobicContact CB-CB 4.1Å; E41-C54 WeakPolarHBondContact OE2-CB 3.04Å; E41-L55 CarbonylContact C-O 3.55Å; E41-L55 WeakPolarHBondContact CA-O 3.13Å
42E88.9Confident87.7Confident105 Ų10587 Ų8749%0.49143%0.431SS..EExtended strand (participates in β ladder)trans-106.3144.9176.2168-179.712400110.9V44 C54 L55 V57E42-V44 HydrophobicContact CG-CG1 4.02Å; E42-V44 PolarHBondContact O-N 2.84Å; E42-V44 WeakPolarHBondContact OE1-CG1 3.43Å; E42-C54 CarbonylContact O-C 3.45Å; E42-C54 VanDerWaalsContact O-CA 3.29Å; E42-C54 WeakPolarHBondContact O-CA 3.43Å; E42-L55 PolarHBondContact N-O 3.11Å; E42-L55 PolarHBondContact O-N 2.78Å; E42-V57 HydrophobicContact CB-CG2 3.32Å
43L90.4Very high87.8Confident93 Ų9381.8 Ų81.849%0.48741%0.411SS..EExtended strand (participates in β ladder)trans-77.1107.7168.5175.968.8000110.1A45 K52L43-A45 VanDerWaalsContact CD1-O 3.26Å; L43-A45 WeakPolarHBondContact CD1-O 3.37Å; L43-K52 HydrophobicContact CD1-CB 3.52Å; L43-K52 HydrophobicContact CD1-CD 4.05Å; L43-K52 HydrophobicContact CD1-CG 3.73Å
44V87.9Confident87.9Confident55 Ų5579.9 Ų79.933%0.33340%0.399SS..EExtended strand (participates in β ladder)trans-104.2-24.6-179-65.20000113.6E42 C53 L55E42-V44 HydrophobicContact CG-CG1 4.02Å; E42-V44 PolarHBondContact O-N 2.84Å; E42-V44 WeakPolarHBondContact OE1-CG1 3.43Å; V44-C53 HydrophobicContact CG2-CB 4.2Å; V44-C53 PolarHBondContact N-O 2.04Å; V44-L55 HydrophobicContact CG1-CB 3.72Å; V44-L55 HydrophobicContact CG1-CD2 4.44Å; V44-L55 HydrophobicContact CG2-CB 4Å
45A85.6Confident87.9Confident25 Ų2581.7 Ų81.721%0.20741%0.407CS..EExtended strand (participates in β ladder)trans-161.3178.9-179.600000111.6L43 C53L43-A45 VanDerWaalsContact CD1-O 3.26Å; L43-A45 WeakPolarHBondContact CD1-O 3.37Å; A45-C53 HydrophobicContact CB-CB 3.82Å; A45-C53 VanDerWaalsContact O-CB 3.3Å; A45-C53 WeakPolarHBondContact O-CB 3.03Å; A45-C53 PolarHBondContact O-N 3.48Å
46L86.1Confident87.7Confident104 Ų10481 Ų8155%0.54541%0.407SS..EExtended strand (participates in β ladder)trans-104.9144.9168.5-63.4174.5000109.7F22 L51F22-L46 WeakPolarHBondContact CB-O 3.29Å; L46-L51 CarbonylContact C-O 3.52Å; L46-L51 WeakPolarHBondContact CA-O 3.46Å
47C86.4Confident87.4Confident9 Ų976.3 Ų76.36%0.06140%0.395CS..  trans-103.3179.9170.3-62.40000110.2C33 L51C33-C47 HydrophobicContact CB-CB 3.64Å; C33-C47 WeakPolarHBondContact CB-SG 3.04Å; C33-C47 WeakPolarHBondContact SG-CB 3.33Å; C33-C47 CovalentContact SG-SG 2.03Å; C33-C47 PolarHBondContact SG-SG 3.08Å; C47-L51 HydrophobicContact CB-CB 3.88Å; C47-L51 PolarHBondContact N-O 3.1Å
48Q82Confident86.7Confident68 Ų6880.6 Ų80.632%0.31841%0.412SS..G310 helixtrans-55.9158.5174-74.9-143.934.300113.3N19 S50 L51N19-Q48 VanDerWaalsContact C-CD 3.47Å; N19-Q48 HydrophobicContact CB-CG 4.26Å; N19-Q48 WeakPolarHBondContact O-CG 3.48Å; N19-Q48 PolarHBondContact O-NE2 2.81Å; Q48-S50 PolarHBondContact O-N 2.87Å; Q48-L51 WeakPolarHBondContact O-CB 3.3Å; Q48-L51 WeakPolarHBondContact O-CG 3.26Å; Q48-L51 PolarHBondContact O-N 3.05Å; Q48-L51 VanDerWaalsContact O-N 3.08Å
49K81.7Confident85.8Confident180 Ų18080.6 Ų80.678%0.78342%0.424SS*.G310 helixtrans53.538.8176.6-57.8-179.8-179.4-179.10112.5L51K49-L51 PolarHBondContact O-N 3.45Å; K49-L51 VanDerWaalsContact O-N 3.1Å
50S80.1Confident84.7Confident109 Ų10977.5 Ų77.576%0.76243%0.427SS*.G310 helixtrans57.520.9-179.556.60000115.3Q48Q48-S50 PolarHBondContact O-N 2.87Å
51L89.4Confident83.6Confident47 Ų4774.6 Ų74.625%0.24643%0.426CS..  trans-71.6155.4172.5-64.5176.1000110.1C33 N35 L46 C47 Q48 K49C33-L51 HydrophobicContact CB-CB 4.48Å; C33-L51 HydrophobicContact CB-CD1 4.43Å; N35-L51 WeakPolarHBondContact OD1-CD2 3.19Å; L46-L51 CarbonylContact C-O 3.52Å; L46-L51 WeakPolarHBondContact CA-O 3.46Å; C47-L51 HydrophobicContact CB-CB 3.88Å; C47-L51 PolarHBondContact N-O 3.1Å; Q48-L51 WeakPolarHBondContact O-CB 3.3Å; Q48-L51 WeakPolarHBondContact O-CG 3.26Å; Q48-L51 PolarHBondContact O-N 3.05Å; Q48-L51 VanDerWaalsContact O-N 3.08Å; K49-L51 PolarHBondContact O-N 3.45Å; K49-L51 VanDerWaalsContact O-N 3.1Å
52K91.4Very high81.7Confident79 Ų7979.3 Ų79.334%0.34346%0.463SS..EExtended strand (participates in β ladder)trans-96.2134.8178.1-67-177.5-172.41110109.5C33 A34 N35 L43C33-K52 CarbonylContact C-O 3.58Å; C33-K52 VanDerWaalsContact CA-O 3.29Å; C33-K52 WeakPolarHBondContact CA-O 3.33Å; A34-K52 PolarHBondContact N-O 2.77Å; A34-K52 WeakPolarHBondContact O-CA 2.98Å; A34-K52 WeakPolarHBondContact O-CB 3.44Å; A34-K52 PolarHBondContact O-N 3.2Å; N35-K52 PolarHBondContact O-NZ 3.33Å; L43-K52 HydrophobicContact CD1-CB 3.52Å; L43-K52 HydrophobicContact CD1-CD 4.05Å; L43-K52 HydrophobicContact CD1-CG 3.73Å
53C91.8Very high80Confident0 Ų084.7 Ų84.70%048%0.484CS..EExtended strand (participates in β ladder)trans-85.5112.3168.2-175.90000108.6C26 V44 A45C26-C53 WeakPolarHBondContact CA-SG 2.94Å; C26-C53 HydrophobicContact CB-CB 3.82Å; C26-C53 WeakPolarHBondContact CB-SG 3.35Å; C26-C53 VanDerWaalsContact SG-CA 3.57Å; C26-C53 WeakPolarHBondContact SG-CB 3.49Å; C26-C53 CovalentContact SG-SG 2.02Å; C26-C53 PolarHBondContact SG-SG 3.34Å; V44-C53 HydrophobicContact CG2-CB 4.2Å; V44-C53 PolarHBondContact N-O 2.04Å; A45-C53 HydrophobicContact CB-CB 3.82Å; A45-C53 VanDerWaalsContact O-CB 3.3Å; A45-C53 WeakPolarHBondContact O-CB 3.03Å; A45-C53 PolarHBondContact O-N 3.48Å
54C92.9Very high77.9Confident2 Ų283.3 Ų83.31%0.01449%0.492CS..EExtended strand (participates in β ladder)trans-107122.3-175.2-56.30000109.9G31 R32 C37 E41 E42G31-C54 CarbonylContact C-O 3.59Å; G31-C54 WeakPolarHBondContact CA-O 3.4Å; R32-C54 PolarHBondContact N-O 2.91Å; R32-C54 PolarHBondContact O-N 2.02Å; C37-C54 WeakPolarHBondContact CA-SG 3.34Å; C37-C54 HydrophobicContact CB-CB 3.66Å; C37-C54 WeakPolarHBondContact CB-SG 3.47Å; C37-C54 PolarHBondContact N-SG 3.4Å; C37-C54 VanDerWaalsContact SG-CA 3.55Å; C37-C54 WeakPolarHBondContact SG-CB 3.44Å; C37-C54 CovalentContact SG-SG 2.04Å; C37-C54 PolarHBondContact SG-SG 2.79Å; E41-C54 HydrophobicContact CB-CB 4.1Å; E41-C54 WeakPolarHBondContact OE2-CB 3.04Å; E42-C54 CarbonylContact O-C 3.45Å; E42-C54 VanDerWaalsContact O-CA 3.29Å; E42-C54 WeakPolarHBondContact O-CA 3.43Å
55L90.8Very high76.2Confident49 Ų4988 Ų8826%0.25752%0.515SS..EExtended strand (participates in β ladder)trans-106.6133179.5-164.1102.7000109.6L29 E41 E42 V44 V57L29-L55 HydrophobicContact CB-CD1 3.96Å; L29-L55 WeakPolarHBondContact O-CD1 3.01Å; E41-L55 CarbonylContact C-O 3.55Å; E41-L55 WeakPolarHBondContact CA-O 3.13Å; E42-L55 PolarHBondContact N-O 3.11Å; E42-L55 PolarHBondContact O-N 2.78Å; V44-L55 HydrophobicContact CG1-CB 3.72Å; V44-L55 HydrophobicContact CG1-CD2 4.44Å; V44-L55 HydrophobicContact CG2-CB 4Å; L55-V57 PolarHBondContact O-N 3.47Å
56T87.1Confident74.7Confident98 Ų9892.5 Ų92.560%0.60154%0.536SS*.EExtended strand (participates in β ladder)trans-66.7117.4173.9-54.70000109.5
57V84Confident73.1Confident64 Ų6493.6 Ų93.639%0.38855%0.553SS.*PPolyproline II helixtrans-88.2121.7175.6-1760000107N40 E42 L55N40-V57 PolarHBondContact O-N 2.84Å; E42-V57 HydrophobicContact CB-CG2 3.32Å; L55-V57 PolarHBondContact O-N 3.47Å
58Q75Confident71.3Confident123 Ų12397 Ų9758%0.57558%0.581SS**PPolyproline II helixtrans-64.3136.5169-85.1-168.40.700109.4C60 D66Q58-C60 PolarHBondContact O-N 3.19Å; Q58-D66 VanDerWaalsContact NE2-CG 3.28Å; Q58-D66 PolarHBondContact NE2-OD2 3.17Å; Q58-D66 PolarHBondContact OE1-OD2 2.94Å
59P70.5Confident69.6Low118 Ų118102.2 Ų102.277%0.76661%0.605SS**PPolyproline II helixtrans-58.1132.7173.125.2-32000109.1G61P59-G61 PolarHBondContact O-N 2.83Å
60C64.2Low67.9Low148 Ų148102.1 Ų102.1100%160%0.601SS**SBendtrans-69.496.4179.1-161.90000109.2Q58Q58-C60 PolarHBondContact O-N 3.19Å
61G60.4Low66.1Low63 Ų63105.1 Ų105.165%0.64961%0.608SS**SBendtrans-151.9129.6173.200000108.1P59 K63P59-G61 PolarHBondContact O-N 2.83Å; G61-K63 PolarHBondContact O-N 3.36Å
62S48.7Very low63.7Low127 Ų127106.5 Ų106.589%0.88863%0.626SS**  trans-13.5118.3-172.6-940000117.2G64S62-G64 PolarHBondContact O-N 3Å; S62-G64 VanDerWaalsContact O-N 3.11Å
63K53.6Low61.1Low218 Ų218113.3 Ų113.395%0.94868%0.675SS**  trans-38.4110.8167.1-77.7170.3168.5164.50112.4G61G61-K63 PolarHBondContact O-N 3.36Å
64G47.3Very low59.5Low63 Ų63119 Ų11965%0.64971%0.708SS**  trans-124.285.2154.100000108.6S62S62-G64 PolarHBondContact O-N 3Å; S62-G64 VanDerWaalsContact O-N 3.11Å
65N51.2Low57.8Low153 Ų153125.2 Ų125.282%0.81875%0.745SS**  trans46.585166.7-77.5-18.8000118.2
66D53.7Low55.9Low120 Ų120129.4 Ų129.464%0.64277%0.772SS**  trans-124.154.7160.8-72-52.5000111.1Q58Q58-D66 VanDerWaalsContact NE2-CG 3.28Å; Q58-D66 PolarHBondContact NE2-OD2 3.17Å; Q58-D66 PolarHBondContact OE1-OD2 2.94Å
67S52.8Low54.1Low128 Ų128131.2 Ų131.290%0.89578%0.782SS**SBendtrans-11823.8162.6-57.50000111.6
68A48.8Very low52.2Low79 Ų79135.4 Ų135.465%0.65381%0.807SS**  trans-139.665.5-176.200000112.4
69E46.3Very low50.7Low178 Ų178136.3 Ų136.383%0.83282%0.822SS**SBendtrans-14239.3144.1-156150.18700111
70Y46.6Very low49.3Very low178 Ų178137.6 Ų137.670%0.69883%0.826SS**SBendtrans-126.740.2158.3-83.4-79000109.2N30N30-Y70 VanDerWaalsContact CG-OH 3.23Å; N30-Y70 WeakPolarHBondContact ND2-CE2 3.29Å; N30-Y70 PolarHBondContact ND2-OH 2.9Å; N30-Y70 PolarHBondContact OD1-OH 3.32Å
71L42.9Very low48.2Very low173 Ų173136.8 Ų136.891%0.90681%0.813SS**SBendtrans-173.979155.3-12883.5000108.9
72A38Very low47.2Very low76 Ų76142.9 Ų142.963%0.62883%0.827SS**  trans-151.1102.2157.700000109
73T36.2Very low47Very low222 Ų222144.4 Ų144.4100%1.36282%0.821SS**  trans91.60172.5-24.30000116.6

Retrieved 73 of 73 residues in 17.9 ms (Link to these results)