A0A068BDV0_HUMAN Loading...

Truncated breast and ovarian cancer susceptibility protein 1

AlphaFold DB , UniProt , Accession A0A068BDV0, Species HUMAN (Homo sapiens, Human), Gene BRCA1, Length 36 aa.

						>A0A068BDV0_HUMAN|A0A068BDV0|BRCA1
LELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPL
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	L	50.2	Low	59.2	Low	195 Å²	195	130.6 Å²	130.6	100%	1.021	67%	0.665	S	S	*	*				0	71.3	0	-165.8	71.7	0	0	108.1	L3	L1-L3 VanDerWaalsContact O-N 3.13Å; L1-L3 PolarHBondContact O-N 3.13Å
2	E	51.6	Low	59.7	Low	194 Å²	194	122.3 Å²	122.3	91%	0.907	63%	0.627	S	S	*	*			trans	-85.2	32.9	-177.2	-63.5	179	95.9	0	111.9
3	L	55.8	Low	60.1	Low	119 Å²	119	124.9 Å²	124.9	62%	0.623	64%	0.643	S	S	*	*			trans	-91	2.3	-166.5	-121.4	92.3	0	0	114.6	L1	L1-L3 VanDerWaalsContact O-N 3.13Å; L1-L3 PolarHBondContact O-N 3.13Å
4	I	57.6	Low	61.2	Low	94 Å²	94	119.7 Å²	119.7	48%	0.482	61%	0.614	S	S	.	*			trans	-126.7	69.5	-173.9	-41.5	176.8	0	0	108.8	E6 P7	I4-E6 VanDerWaalsContact C-N 3.3Å; I4-P7 HydrophobicContact CG2-CB 3.7Å; I4-P7 HydrophobicContact CG2-CG 4.14Å
5	K	57.9	Low	62	Low	202 Å²	202	119.9 Å²	119.9	88%	0.878	62%	0.615	S	S	*	*	S	Bend	trans	-71.5	-28.5	172.6	-107	178	176.9	176.3	112.3
6	E	60.7	Low	62.8	Low	127 Å²	127	114.9 Å²	114.9	59%	0.593	59%	0.588	S	S	*	*	S	Bend	trans	-150.9	95.8	179.3	-60.9	-177.3	110.3	0	109.3	I4 K18	I4-E6 VanDerWaalsContact C-N 3.3Å; E6-K18 IonicContact OE2-NZ 3.76Å
7	P	62.3	Low	63.6	Low	79 Å²	79	109.4 Å²	109.4	51%	0.513	56%	0.562	S	S	.	*			trans	-69.3	142.2	175.8	27.2	-30.1	0	0	110.6	I4 I15	I4-P7 HydrophobicContact CG2-CB 3.7Å; I4-P7 HydrophobicContact CG2-CG 4.14Å; P7-I15 HydrophobicContact CB-CG2 3.62Å
8	V	61.8	Low	64.3	Low	62 Å²	62	110.1 Å²	110.1	38%	0.376	56%	0.56	S	S	.	*	E	Extended strand (participates in β ladder)	trans	-106.7	118.8	172	-175.6	0	0	0	108.3	F16 M21	V8-F16 PolarHBondContact N-O 3.43Å; V8-M21 HydrophobicContact CB-CE 3.91Å; V8-M21 HydrophobicContact CG1-CE 3.72Å
9	S	61.8	Low	65.1	Low	99 Å²	99	112.3 Å²	112.3	69%	0.692	57%	0.565	S	S	*	*	E	Extended strand (participates in β ladder)	trans	-83.9	120.5	174.4	57.9	0	0	0	110.3
10	T	65.6	Low	65.7	Low	40 Å²	40	109.8 Å²	109.8	25%	0.245	56%	0.558	C	S	.	*			trans	-84.3	164.9	168.3	46.4	0	0	0	111.1	C12 H14 F16 M21	T10-C12 PolarHBondContact O-N 3.48Å; T10-C12 PolarHBondContact OG1-SG 2.61Å; T10-C12 PolarHBondContact OG1-O 2.63Å; T10-C12 CarbonylContact O-C 3.33Å; T10-C12 WeakPolarHBondContact CB-O 3.41Å; T10-C12 CarbonylContact C-O 3.16Å; T10-H14 PolarHBondContact OG1-O 3.15Å; T10-F16 HydrophobicContact CG2-CD2 4.32Å; T10-F16 HydrophobicContact CG2-CE2 4.22Å; T10-M21 HydrophobicContact CG2-CE 3.43Å; T10-M21 VanDerWaalsContact CG2-CE 3.43Å; T10-M21 HydrophobicContact CG2-SD 4.45Å
11	K	66.3	Low	66.3	Low	226 Å²	226	105.6 Å²	105.6	98%	0.983	54%	0.537	S	S	*	.	S	Bend	trans	-60	-28	175.9	-69.3	-174.1	179.2	-179.2	113
12	C	64.9	Low	67.8	Low	31 Å²	31	101.3 Å²	101.3	21%	0.209	51%	0.514	C	S	.	.	S	Bend	trans	-83.5	122.5	160.1	57.6	0	0	0	105.5	T10 H14 C34	T10-C12 PolarHBondContact O-N 3.48Å; T10-C12 PolarHBondContact OG1-SG 2.61Å; T10-C12 PolarHBondContact OG1-O 2.63Å; T10-C12 CarbonylContact O-C 3.33Å; T10-C12 WeakPolarHBondContact CB-O 3.41Å; T10-C12 CarbonylContact C-O 3.16Å; C12-H14 WeakPolarHBondContact CB-CE1 3.5Å; C12-H14 PolarHBondContact SG-ND1 3.06Å; C12-H14 PolarHBondContact O-N 3.24Å; C12-H14 VanDerWaalsContact CB-CE1 3.5Å; C12-H14 WeakPolarHBondContact CB-ND1 3.28Å; C12-C34 HydrophobicContact CB-CB 4.2Å; C12-C34 WeakPolarHBondContact CB-SG 3.4Å; C12-C34 WeakPolarHBondContact SG-CB 3.27Å; C12-C34 CovalentContact SG-SG 2.06Å; C12-C34 PolarHBondContact SG-SG 2.95Å
13	D	64.9	Low	69.2	Low	156 Å²	156	98 Å²	98	83%	0.834	50%	0.497	S	S	*	.	S	Bend	trans	-61.8	47.4	-167	-160.2	-112.4	0	0	115.4
14	H	76.3	Confident	70.2	Confident	52 Å²	52	94.1 Å²	94.1	24%	0.241	48%	0.477	C	S	.	.			trans	-106.1	133.4	-173.1	-56.1	127.3	0	0	109.6	T10 C12 F16 L36	T10-H14 PolarHBondContact OG1-O 3.15Å; C12-H14 WeakPolarHBondContact CB-CE1 3.5Å; C12-H14 PolarHBondContact SG-ND1 3.06Å; C12-H14 PolarHBondContact O-N 3.24Å; C12-H14 VanDerWaalsContact CB-CE1 3.5Å; C12-H14 WeakPolarHBondContact CB-ND1 3.28Å; H14-F16 HydrophobicContact CB-CZ 3.69Å; H14-F16 VanDerWaalsContact CB-CE2 3.43Å; H14-F16 HydrophobicContact CB-CE2 3.43Å; H14-F16 HydrophobicContact CB-CD2 4.23Å; H14-L36 HydrophobicContact CB-CD1 4.29Å; H14-L36 VanDerWaalsContact CD2-CD1 3.43Å; H14-L36 WeakPolarHBondContact CD2-CD1 3.21Å; H14-L36 WeakPolarHBondContact CE1-CD1 3.14Å; H14-L36 WeakPolarHBondContact ND1-CD1 3.32Å; H14-L36 VanDerWaalsContact NE2-CD1 3.28Å; H14-L36 WeakPolarHBondContact NE2-CD1 3.43Å; H14-L36 WeakPolarHBondContact NE2-CD2 3.2Å
15	I	72.3	Confident	71	Confident	123 Å²	123	94.8 Å²	94.8	63%	0.631	48%	0.48	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-99.4	115.9	178.9	-61.6	170.6	0	0	108	P7	P7-I15 HydrophobicContact CB-CG2 3.62Å
16	F	75.6	Confident	71.9	Confident	40 Å²	40	92.2 Å²	92.2	18%	0.175	48%	0.476	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-112.7	148.4	172.1	-56.7	-82.9	0	0	110.1	V8 T10 H14 M21 P35	V8-F16 PolarHBondContact N-O 3.43Å; T10-F16 HydrophobicContact CG2-CD2 4.32Å; T10-F16 HydrophobicContact CG2-CE2 4.22Å; H14-F16 HydrophobicContact CB-CZ 3.69Å; H14-F16 VanDerWaalsContact CB-CE2 3.43Å; H14-F16 HydrophobicContact CB-CE2 3.43Å; H14-F16 HydrophobicContact CB-CD2 4.23Å; F16-M21 HydrophobicContact CG-CE 4.3Å; F16-M21 HydrophobicContact CB-CE 4.18Å; F16-M21 HydrophobicContact CD2-CE 3.72Å; F16-P35 HydrophobicContact CZ-CG 4.18Å; F16-P35 HydrophobicContact CE1-CG 4.18Å
17	C	76.7	Confident	72.3	Confident	21 Å²	21	93.2 Å²	93.2	14%	0.142	48%	0.481	C	S	.	.			trans	-71	153.4	164.8	75.8	0	0	0	109.9	F19 C20 M21	C17-F19 PolarHBondContact O-N 3.1Å; C17-F19 VanDerWaalsContact O-N 3.15Å; C17-C20 PolarHBondContact O-N 3.09Å; C17-C20 VanDerWaalsContact O-N 3.09Å; C17-C20 PolarHBondContact SG-N 2.98Å; C17-C20 VanDerWaalsContact SG-N 3.42Å; C17-C20 PolarHBondContact SG-SG 3.4Å; C17-M21 PolarHBondContact O-N 3.42Å
18	K	75.7	Confident	72.2	Confident	121 Å²	121	94.1 Å²	94.1	53%	0.526	48%	0.477	S	S	.	.	H	α-helix	trans	-51.1	-40.3	179.2	-172.5	173.6	-173.2	168.3	112.7	E6 M21 L22	E6-K18 IonicContact OE2-NZ 3.76Å; K18-M21 PolarHBondContact O-N 3.41Å; K18-L22 HydrophobicContact CG-CD1 4.13Å; K18-L22 PolarHBondContact O-N 2.06Å; K18-L22 WeakPolarHBondContact O-CG 3.22Å; K18-L22 VanDerWaalsContact O-CG 3.27Å
19	F	79.9	Confident	72.3	Confident	152 Å²	152	102.1 Å²	102.1	67%	0.667	51%	0.507	S	S	*	.	H	α-helix	trans	-63.1	-48	178.7	-179.9	-97.6	0	0	112.7	C17 M21 L22 K23	C17-F19 PolarHBondContact O-N 3.1Å; C17-F19 VanDerWaalsContact O-N 3.15Å; F19-M21 VanDerWaalsContact C-N 3.31Å; F19-M21 PolarHBondContact O-N 3.44Å; F19-L22 PolarHBondContact O-N 3.19Å; F19-K23 PolarHBondContact O-N 3.42Å
20	C	76.9	Confident	72.4	Confident	63 Å²	63	99.4 Å²	99.4	43%	0.426	50%	0.495	S	S	.	.	H	α-helix	trans	-62.9	-39.7	178	-71.6	0	0	0	111.6	C17 K23 L24	C17-C20 PolarHBondContact O-N 3.09Å; C17-C20 VanDerWaalsContact O-N 3.09Å; C17-C20 PolarHBondContact SG-N 2.98Å; C17-C20 VanDerWaalsContact SG-N 3.42Å; C17-C20 PolarHBondContact SG-SG 3.4Å; C20-K23 PolarHBondContact O-N 3.2Å; C20-L24 WeakPolarHBondContact O-CB 3.39Å; C20-L24 PolarHBondContact O-N 2.96Å
21	M	77.7	Confident	72	Confident	22 Å²	22	103.9 Å²	103.9	11%	0.108	52%	0.524	C	S	.	.	H	α-helix	trans	-63.1	-48	177	-168.3	64.2	83.5	0	111.5	V8 T10 F16 C17 K18 F19 K23 L24 L25	V8-M21 HydrophobicContact CB-CE 3.91Å; V8-M21 HydrophobicContact CG1-CE 3.72Å; T10-M21 HydrophobicContact CG2-CE 3.43Å; T10-M21 VanDerWaalsContact CG2-CE 3.43Å; T10-M21 HydrophobicContact CG2-SD 4.45Å; F16-M21 HydrophobicContact CG-CE 4.3Å; F16-M21 HydrophobicContact CB-CE 4.18Å; F16-M21 HydrophobicContact CD2-CE 3.72Å; C17-M21 PolarHBondContact O-N 3.42Å; K18-M21 PolarHBondContact O-N 3.41Å; F19-M21 VanDerWaalsContact C-N 3.31Å; F19-M21 PolarHBondContact O-N 3.44Å; M21-K23 VanDerWaalsContact C-N 3.33Å; M21-K23 PolarHBondContact O-N 2.98Å; M21-L24 PolarHBondContact O-N 3.41Å; M21-L25 HydrophobicContact CG-CD1 4.14Å; M21-L25 VanDerWaalsContact O-CG 3.29Å; M21-L25 WeakPolarHBondContact O-CG 3.18Å; M21-L25 PolarHBondContact O-N 2.99Å
22	L	81.3	Confident	71.8	Confident	104 Å²	104	96 Å²	96	55%	0.545	50%	0.498	S	S	.	.	H	α-helix	trans	-61.1	-41.2	177.8	-71.1	171	0	0	112.1	K18 F19 L25 N26	K18-L22 HydrophobicContact CG-CD1 4.13Å; K18-L22 PolarHBondContact O-N 2.06Å; K18-L22 WeakPolarHBondContact O-CG 3.22Å; K18-L22 VanDerWaalsContact O-CG 3.27Å; F19-L22 PolarHBondContact O-N 3.19Å; L22-L25 PolarHBondContact O-N 3.3Å; L22-N26 WeakPolarHBondContact O-CB 3.46Å; L22-N26 PolarHBondContact O-N 3.39Å
23	K	80.9	Confident	71.7	Confident	124 Å²	124	102.3 Å²	102.3	54%	0.539	52%	0.524	S	S	.	.	H	α-helix	trans	-61.8	-43.9	175.3	-171.9	178.4	179.9	-178.3	111.7	F19 C20 M21 N26 Q27	F19-K23 PolarHBondContact O-N 3.42Å; C20-K23 PolarHBondContact O-N 3.2Å; M21-K23 VanDerWaalsContact C-N 3.33Å; M21-K23 PolarHBondContact O-N 2.98Å; K23-N26 PolarHBondContact O-N 3.36Å; K23-Q27 PolarHBondContact O-N 2.9Å; K23-Q27 WeakPolarHBondContact O-CG 3.29Å
24	L	76.3	Confident	71.6	Confident	39 Å²	39	97.8 Å²	97.8	20%	0.204	50%	0.504	C	S	.	.	H	α-helix	trans	-62.8	-45.1	178.3	-176.3	67.4	0	0	111.8	C20 M21 N26 Q27 P35	C20-L24 WeakPolarHBondContact O-CB 3.39Å; C20-L24 PolarHBondContact O-N 2.96Å; M21-L24 PolarHBondContact O-N 3.41Å; L24-N26 VanDerWaalsContact C-N 3.33Å; L24-N26 PolarHBondContact O-N 3.28Å; L24-Q27 PolarHBondContact O-N 3.49Å; L24-P35 HydrophobicContact CD1-CG 4.28Å; L24-P35 HydrophobicContact CD2-CG 4.07Å
25	L	74.5	Confident	71.1	Confident	107 Å²	107	98.9 Å²	98.9	56%	0.56	52%	0.516	S	S	*	.	H	α-helix	trans	-64.5	-37.3	178.2	-67.7	172.8	0	0	112.1	M21 L22 Q27	M21-L25 HydrophobicContact CG-CD1 4.14Å; M21-L25 VanDerWaalsContact O-CG 3.29Å; M21-L25 WeakPolarHBondContact O-CG 3.18Å; M21-L25 PolarHBondContact O-N 2.99Å; L22-L25 PolarHBondContact O-N 3.3Å; L25-Q27 PolarHBondContact O-N 3.34Å
26	N	78.1	Confident	70.5	Confident	148 Å²	148	101.4 Å²	101.4	79%	0.791	53%	0.529	S	S	*	.	H	α-helix	trans	-72.7	-15.7	179.5	-162.5	60.6	0	0	113.5	L22 K23 L24	L22-N26 WeakPolarHBondContact O-CB 3.46Å; L22-N26 PolarHBondContact O-N 3.39Å; K23-N26 PolarHBondContact O-N 3.36Å; L24-N26 VanDerWaalsContact C-N 3.33Å; L24-N26 PolarHBondContact O-N 3.28Å
27	Q	69	Low	70.3	Confident	148 Å²	148	104.5 Å²	104.5	69%	0.692	55%	0.547	S	S	*	.	H	α-helix	trans	-96.9	-13.8	-177.2	-73.8	-154	0.8	0	115.3	K23 L24 L25	K23-Q27 PolarHBondContact O-N 2.9Å; K23-Q27 WeakPolarHBondContact O-CG 3.29Å; L24-Q27 PolarHBondContact O-N 3.49Å; L25-Q27 PolarHBondContact O-N 3.34Å
28	K	60.6	Low	69.9	Low	98 Å²	98	108.8 Å²	108.8	43%	0.426	57%	0.568	S	S	.	*			trans	-124	118.2	-174.3	-68.1	-170.3	176.3	-179.1	112.6	G30	K28-G30 VanDerWaalsContact C-N 3.26Å; K28-G30 PolarHBondContact O-N 2.97Å
29	K	62.1	Low	69.6	Low	230 Å²	230	108.2 Å²	108.2	100%	1	57%	0.571	S	S	*	*	S	Bend	trans	-88	29.2	167	-71.9	-171.8	175.8	-180	112.9
30	G	64.5	Low	69	Low	43 Å²	43	105.6 Å²	105.6	44%	0.443	57%	0.565	S	S	.	*	S	Bend	trans	-161.5	176.6	-175.6	0	0	0	0	111.4	K28 S32	K28-G30 VanDerWaalsContact C-N 3.26Å; K28-G30 PolarHBondContact O-N 2.97Å; G30-S32 PolarHBondContact O-N 3.43Å
31	P	58.3	Low	68.5	Low	134 Å²	134	108.3 Å²	108.3	87%	0.87	57%	0.574	S	S	*	*			trans	-57	111.2	-176.8	21.8	-31.2	0	0	110.5	Q33	P31-Q33 PolarHBondContact O-N 3.29Å
32	S	60.8	Low	67.9	Low	60 Å²	60	114 Å²	114	42%	0.42	61%	0.605	S	S	.	*			trans	-77.4	106.1	178	35.9	0	0	0	109.2	G30	G30-S32 PolarHBondContact O-N 3.43Å
33	Q	62.8	Low	67	Low	163 Å²	163	114.7 Å²	114.7	76%	0.762	61%	0.609	S	S	*	*			trans	-60.4	137.8	164.4	-66.9	-178.7	34.8	0	109.3	P31	P31-Q33 PolarHBondContact O-N 3.29Å
34	C	64.4	Low	65.9	Low	61 Å²	61	114 Å²	114	41%	0.412	62%	0.615	S	S	.	*			trans	-56.2	125.5	176.3	-63	0	0	0	108.2	C12 L36	C12-C34 HydrophobicContact CB-CB 4.2Å; C12-C34 WeakPolarHBondContact CB-SG 3.4Å; C12-C34 WeakPolarHBondContact SG-CB 3.27Å; C12-C34 CovalentContact SG-SG 2.06Å; C12-C34 PolarHBondContact SG-SG 2.95Å; C34-L36 PolarHBondContact O-N 3.44Å
35	P	64.4	Low	65	Low	75 Å²	75	120.3 Å²	120.3	49%	0.487	65%	0.649	S	S	.	*			trans	-80.1	48.3	-170.6	32.8	-36.6	0	0	113.5	F16 L24	F16-P35 HydrophobicContact CZ-CG 4.18Å; F16-P35 HydrophobicContact CE1-CG 4.18Å; L24-P35 HydrophobicContact CD1-CG 4.28Å; L24-P35 HydrophobicContact CD2-CG 4.07Å
36	L	60.7	Low	64.1	Low	176 Å²	176	121.5 Å²	121.5	92%	0.921	66%	0.657	S	S	*	*			trans	-93.2	0	168.2	-85.1	84.5	0	0	111.6	H14 C34	H14-L36 HydrophobicContact CB-CD1 4.29Å; H14-L36 VanDerWaalsContact CD2-CD1 3.43Å; H14-L36 WeakPolarHBondContact CD2-CD1 3.21Å; H14-L36 WeakPolarHBondContact CE1-CD1 3.14Å; H14-L36 WeakPolarHBondContact ND1-CD1 3.32Å; H14-L36 VanDerWaalsContact NE2-CD1 3.28Å; H14-L36 WeakPolarHBondContact NE2-CD1 3.43Å; H14-L36 WeakPolarHBondContact NE2-CD2 3.2Å; C34-L36 PolarHBondContact O-N 3.44Å

Retrieved 36 of 36 residues in 32.9 ms (Link to these results)

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