A0A075B6U8_HUMAN Loading...

T cell receptor alpha joining 12 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6U8, Species HUMAN (Homo sapiens, Human), Gene TRAJ12, Length 20 aa.

						>A0A075B6U8_HUMAN|A0A075B6U8|TRAJ12
XMDSSYKLIFGSGTRLLVRP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	76.9	Confident	86	Confident	129 Å²	129	134.8 Å²	134.8	100%	1.33	76%	0.76	S	S	*	*				0	143.6	0	0	0	0	0	0	107.9	D3	G1-D3 VanDerWaalsContact O-N 3.14Å; G1-D3 PolarHBondContact O-N 3.49Å
2	M	75.7	Confident	86.9	Confident	184 Å²	184	134.9 Å²	134.9	91%	0.906	78%	0.776	S	S	*	*			trans	-65.9	112.1	174.4	-71.9	174.5	180	0	0	108.4	S4	M2-S4 PolarHBondContact O-N 3.39Å; M2-S4 PolarHBondContact O-OG 2.84Å
3	D	77.8	Confident	87.8	Confident	147 Å²	147	130.8 Å²	130.8	79%	0.786	78%	0.781	S	S	*	*			trans	-66.7	103.7	174.1	-166	0.6	0	0	0	107.6	X1 S5	G1-D3 VanDerWaalsContact O-N 3.14Å; G1-D3 PolarHBondContact O-N 3.49Å; D3-S5 PolarHBondContact O-N 3.43Å
4	S	78.1	Confident	88.5	Confident	72 Å²	72	127.2 Å²	127.2	50%	0.503	76%	0.76	S	S	.	*			trans	-82.5	72.7	-172.9	-53.8	0	0	0	0	108.1	M2 Y6	M2-S4 PolarHBondContact O-N 3.39Å; M2-S4 PolarHBondContact O-OG 2.84Å; S4-Y6 WeakPolarHBondContact O-CD2 3.27Å; S4-Y6 WeakPolarHBondContact O-CE2 3.46Å; S4-Y6 PolarHBondContact O-N 3.08Å
5	S	85.1	Confident	89	Confident	97 Å²	97	134.2 Å²	134.2	68%	0.678	77%	0.768	S	S	*	*			trans	-68.9	98.8	171.8	-72.1	0	0	0	0	109	D3	D3-S5 PolarHBondContact O-N 3.43Å
6	Y	85.5	Confident	89.4	Confident	208 Å²	208	133 Å²	133	82%	0.816	76%	0.758	S	S	*	*	P	Polyproline II helix	trans	-71.6	128.7	173.9	-64.1	-79.7	0	0	0	109.8	S4	S4-Y6 WeakPolarHBondContact O-CD2 3.27Å; S4-Y6 WeakPolarHBondContact O-CE2 3.46Å; S4-Y6 PolarHBondContact O-N 3.08Å
7	K	88.9	Confident	89.8	Confident	184 Å²	184	134.3 Å²	134.3	80%	0.8	76%	0.761	S	S	*	*	P	Polyproline II helix	trans	-88.6	133.7	173.8	-67	-177	-178.7	178.6	0	109.6	I9	K7-I9 HydrophobicContact CB-CG1 4.34Å; K7-I9 PolarHBondContact O-N 3.5Å
8	L	92.2	Very high	90.1	Very high	151 Å²	151	133.4 Å²	133.4	79%	0.791	76%	0.758	S	S	*	*	P	Polyproline II helix	trans	-80.1	116.5	165.5	-60.3	177.6	0	0	0	108	F10	L8-F10 HydrophobicContact CB-CE2 4.39Å; L8-F10 HydrophobicContact CB-CZ 4.27Å
9	I	94.3	Very high	90.3	Very high	146 Å²	146	138.3 Å²	138.3	75%	0.749	76%	0.763	S	S	*	*			trans	-111.8	126.3	179.7	-58.7	174.1	0	0	0	108	K7	K7-I9 HydrophobicContact CB-CG1 4.34Å; K7-I9 PolarHBondContact O-N 3.5Å
10	F	95.3	Very high	90.5	Very high	118 Å²	118	141.5 Å²	141.5	52%	0.518	79%	0.791	S	S	.	*			trans	-109	128.8	174.7	-55.6	-69.2	0	0	0	109.7	L8 T14 L16	L8-F10 HydrophobicContact CB-CE2 4.39Å; L8-F10 HydrophobicContact CB-CZ 4.27Å; F10-T14 HydrophobicContact CB-CG2 4.2Å; F10-T14 HydrophobicContact CD1-CG2 3.84Å; F10-T14 HydrophobicContact CG-CG2 4.4Å; F10-L16 HydrophobicContact CE1-CD1 4.39Å; F10-L16 HydrophobicContact CZ-CD2 4.32Å; F10-L16 HydrophobicContact CZ-CD1 4.19Å; F10-L16 HydrophobicContact CE2-CD2 4.36Å
11	G	96.3	Very high	90.5	Very high	47 Å²	47	141.5 Å²	141.5	49%	0.485	79%	0.791	S	S	.	*			trans	-88.5	170.8	178.3	0	0	0	0	0	112.8	G13 T14	G11-G13 PolarHBondContact O-N 3Å; G11-T14 PolarHBondContact N-OG1 2.92Å; G11-T14 VanDerWaalsContact O-CB 3.27Å; G11-T14 WeakPolarHBondContact O-CB 3.2Å; G11-T14 PolarHBondContact O-N 2.99Å; G11-T14 VanDerWaalsContact O-N 3.08Å; G11-T14 PolarHBondContact O-OG1 3.14Å
12	S	96.9	Very high	91.2	Very high	136 Å²	136	142.1 Å²	142.1	95%	0.951	76%	0.762	S	S	*	*	T	Hydrogen-bonded Turn	trans	-51.6	132	175.5	-55	0	0	0	0	111.7	T14	S12-T14 VanDerWaalsContact C-N 3.33Å
13	G	97.9	Very high	92.1	Very high	81 Å²	81	139.8 Å²	139.8	84%	0.835	75%	0.754	S	S	*	*	T	Hydrogen-bonded Turn	trans	85.9	-7.2	-178.7	0	0	0	0	0	115.4	G11 R15	G11-G13 PolarHBondContact O-N 3Å; G13-R15 PolarHBondContact O-N 3.21Å
14	T	97.6	Very high	92.9	Very high	81 Å²	81	139.4 Å²	139.4	50%	0.497	75%	0.752	S	S	.	*			trans	-70.8	129.7	176.7	-53	0	0	0	0	111	F10 G11 S12	F10-T14 HydrophobicContact CB-CG2 4.2Å; F10-T14 HydrophobicContact CD1-CG2 3.84Å; F10-T14 HydrophobicContact CG-CG2 4.4Å; G11-T14 PolarHBondContact N-OG1 2.92Å; G11-T14 VanDerWaalsContact O-CB 3.27Å; G11-T14 WeakPolarHBondContact O-CB 3.2Å; G11-T14 PolarHBondContact O-N 2.99Å; G11-T14 VanDerWaalsContact O-N 3.08Å; G11-T14 PolarHBondContact O-OG1 3.14Å; S12-T14 VanDerWaalsContact C-N 3.33Å
15	R	96.4	Very high	93.9	Very high	232 Å²	232	143.6 Å²	143.6	88%	0.875	77%	0.768	S	S	*	*			trans	-109.1	113.6	174.6	-62.3	-179.3	-174.8	-177.7	0.8	109.4	G13	G13-R15 PolarHBondContact O-N 3.21Å
16	L	95.6	Very high	94.4	Very high	115 Å²	115	146.7 Å²	146.7	60%	0.602	77%	0.774	S	S	*	*			trans	-88.3	127.7	174.5	-176.9	65.4	0	0	0	109.7	F10 V18	F10-L16 HydrophobicContact CE1-CD1 4.39Å; F10-L16 HydrophobicContact CZ-CD2 4.32Å; F10-L16 HydrophobicContact CZ-CD1 4.19Å; F10-L16 HydrophobicContact CE2-CD2 4.36Å; L16-V18 HydrophobicContact CD2-CG2 4.23Å; L16-V18 HydrophobicContact CG-CG2 4.21Å
17	L	96.1	Very high	95.1	Very high	155 Å²	155	142.3 Å²	142.3	81%	0.812	77%	0.771	S	S	*	*			trans	-110	119.2	173.5	-60.5	176.6	0	0	0	108.5
18	V	95.3	Very high	95.6	Very high	118 Å²	118	139.1 Å²	139.1	72%	0.715	77%	0.768	S	S	*	*			trans	-105.9	124.3	174.2	-177.7	0	0	0	0	107.9	L16	L16-V18 HydrophobicContact CD2-CG2 4.23Å; L16-V18 HydrophobicContact CG-CG2 4.21Å
19	R	94.5	Very high	95.8	Very high	227 Å²	227	138.1 Å²	138.1	86%	0.857	77%	0.767	S	S	*	*			trans	-97	132.2	165.6	-66.4	179.5	-178.8	153.1	0.5	106.9
20	P	93.9	Very high	96	Very high	201 Å²	201	137.4 Å²	137.4	100%	1.305	77%	0.768	S	S	*	*			trans	-52.5	0	169.8	-24	34.2	0	0	0	112.2

Retrieved 20 of 20 residues in 19.1 ms (Link to these results)

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