A0A075B6V3_HUMAN Loading...

T cell receptor alpha joining 48 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6V3, Species HUMAN (Homo sapiens, Human), Gene TRAJ48, Length 21 aa.

						>A0A075B6V3_HUMAN|A0A075B6V3|TRAJ48
XSNFGNEKLTFGTGTRLTIIP
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	68.6	Low	86.8	Confident	116 Å²	116	132.5 Å²	132.5	100%	1.196	75%	0.751	S	S	*	*				0	133.1	0	0	0	0	0	0	108.4	N3	G1-N3 PolarHBondContact O-N 3.44Å
2	S	77.9	Confident	87.6	Confident	104 Å²	104	127.4 Å²	127.4	73%	0.727	75%	0.75	S	S	*	*			trans	-75.6	112.2	175.7	47.1	0	0	0	0	109.4
3	N	78.9	Confident	88.4	Confident	125 Å²	125	129.6 Å²	129.6	67%	0.668	77%	0.766	S	S	*	*			trans	-99.8	58	-177.7	-80.3	-42.1	0	0	0	110.7	X1 N6	G1-N3 PolarHBondContact O-N 3.44Å; N3-N6 VanDerWaalsContact CA-OD1 3.26Å; N3-N6 WeakPolarHBondContact CA-OD1 3.21Å; N3-N6 WeakPolarHBondContact CB-ND2 3.26Å; N3-N6 PolarHBondContact O-OD1 3.1Å; N3-N6 VanDerWaalsContact O-OD1 3.09Å; N3-N6 PolarHBondContact OD1-ND2 3.16Å
4	F	87.7	Confident	89.1	Confident	192 Å²	192	124.3 Å²	124.3	84%	0.842	75%	0.752	S	S	*	*			trans	-105.1	136.8	174.8	-59.6	-66.7	0	0	0	110.1	N6	F4-N6 VanDerWaalsContact C-OD1 3.31Å; F4-N6 PolarHBondContact N-OD1 3.09Å; F4-N6 VanDerWaalsContact N-OD1 3.16Å; F4-N6 PolarHBondContact O-OD1 3.4Å
5	G	86.1	Confident	89.6	Confident	58 Å²	58	125.3 Å²	125.3	60%	0.598	76%	0.759	S	S	*	*	S	Bend	trans	81.9	17.1	-178.3	0	0	0	0	0	114.8	E7	G5-E7 PolarHBondContact O-N 3.39Å
6	N	88.5	Confident	90.1	Very high	104 Å²	104	131.6 Å²	131.6	56%	0.556	77%	0.765	S	S	*	*			trans	-74.7	-13.2	-179.6	-53.2	25.9	0	0	0	113.1	N3 F4	N3-N6 VanDerWaalsContact CA-OD1 3.26Å; N3-N6 WeakPolarHBondContact CA-OD1 3.21Å; N3-N6 WeakPolarHBondContact CB-ND2 3.26Å; N3-N6 PolarHBondContact O-OD1 3.1Å; N3-N6 VanDerWaalsContact O-OD1 3.09Å; N3-N6 PolarHBondContact OD1-ND2 3.16Å; F4-N6 VanDerWaalsContact C-OD1 3.31Å; F4-N6 PolarHBondContact N-OD1 3.09Å; F4-N6 VanDerWaalsContact N-OD1 3.16Å; F4-N6 PolarHBondContact O-OD1 3.4Å
7	E	92	Very high	90.5	Very high	169 Å²	169	132.4 Å²	132.4	79%	0.79	76%	0.764	S	S	*	*	S	Bend	trans	-95.2	161.8	177.6	-64.9	-179.5	-174.5	0	0	110.7	G5 L9	G5-E7 PolarHBondContact O-N 3.39Å; E7-L9 PolarHBondContact O-N 3.06Å
8	K	92.4	Very high	90.9	Very high	189 Å²	189	130 Å²	130	82%	0.822	75%	0.752	S	S	*	*			trans	-63.1	114	-179	-177.9	179.2	179.1	-179.4	0	110.7
9	L	92.5	Very high	91.1	Very high	109 Å²	109	130.1 Å²	130.1	57%	0.571	75%	0.748	S	S	*	*			trans	-80.7	126.7	169.9	-56.5	-177.7	0	0	0	109.9	E7 F11	E7-L9 PolarHBondContact O-N 3.06Å; L9-F11 HydrophobicContact CB-CD2 4.43Å; L9-F11 HydrophobicContact CB-CE2 3.62Å; L9-F11 HydrophobicContact CB-CZ 3.87Å; L9-F11 HydrophobicContact CD1-CE2 4.37Å; L9-F11 HydrophobicContact CD1-CZ 3.99Å
10	T	94.5	Very high	91.2	Very high	120 Å²	120	130.9 Å²	130.9	74%	0.736	75%	0.748	S	S	*	*			trans	-110.1	117.5	175.5	-57.9	0	0	0	0	108.7
11	F	95.8	Very high	91.2	Very high	171 Å²	171	133.6 Å²	133.6	75%	0.75	77%	0.771	S	S	*	*			trans	-102	150.2	177.9	-60.6	-84	0	0	0	110.8	L9	L9-F11 HydrophobicContact CB-CD2 4.43Å; L9-F11 HydrophobicContact CB-CE2 3.62Å; L9-F11 HydrophobicContact CB-CZ 3.87Å; L9-F11 HydrophobicContact CD1-CE2 4.37Å; L9-F11 HydrophobicContact CD1-CZ 3.99Å
12	G	96.8	Very high	92.3	Very high	72 Å²	72	134.5 Å²	134.5	74%	0.742	75%	0.749	S	S	*	*			trans	-79.8	-171.6	170.5	0	0	0	0	0	112.5	G14	G12-G14 PolarHBondContact O-N 3.37Å; G12-G14 VanDerWaalsContact O-N 3.1Å
13	T	97.9	Very high	93.1	Very high	156 Å²	156	136.1 Å²	136.1	96%	0.957	75%	0.751	S	S	*	*	S	Bend	trans	-68.9	-5.5	179.7	53.7	0	0	0	0	114.5
14	G	97.3	Very high	93.9	Very high	55 Å²	55	136.7 Å²	136.7	57%	0.567	76%	0.755	S	S	*	*			trans	79.2	-175.1	-174.5	0	0	0	0	0	113.2	G12	G12-G14 PolarHBondContact O-N 3.37Å; G12-G14 VanDerWaalsContact O-N 3.1Å
15	T	97	Very high	94.3	Very high	140 Å²	140	133.5 Å²	133.5	86%	0.859	75%	0.75	S	S	*	*			trans	-132.9	132.3	179.5	-61.3	0	0	0	0	109	L17	T15-L17 PolarHBondContact O-N 3.07Å
16	R	97.3	Very high	94.8	Very high	226 Å²	226	138.2 Å²	138.2	85%	0.853	76%	0.76	S	S	*	*			trans	-86.1	106.5	172.5	-173.8	-179.9	-177.6	-152.3	-0.2	109.2
17	L	96.9	Very high	95.2	Very high	145 Å²	145	140.5 Å²	140.5	76%	0.759	77%	0.773	S	S	*	*			trans	-83.6	126.9	171.2	-174.9	62.7	0	0	0	109.7	T15 I19	T15-L17 PolarHBondContact O-N 3.07Å; L17-I19 HydrophobicContact CD2-CD1 4.41Å; L17-I19 HydrophobicContact CG-CD1 4.32Å
18	T	97.5	Very high	95.4	Very high	89 Å²	89	138.4 Å²	138.4	55%	0.546	77%	0.772	S	S	.	*			trans	-118	125.2	174.5	-58.9	0	0	0	0	108.5
19	I	94.6	Very high	95.7	Very high	131 Å²	131	134.5 Å²	134.5	67%	0.672	77%	0.768	S	S	*	*			trans	-99.8	123.3	173.1	-55.5	-62.8	0	0	0	107.7	L17	L17-I19 HydrophobicContact CD2-CD1 4.41Å; L17-I19 HydrophobicContact CG-CD1 4.32Å
20	I	94.5	Very high	95.9	Very high	147 Å²	147	136.7 Å²	136.7	75%	0.754	79%	0.785	S	S	*	*			trans	-98.1	120.3	167.4	-60.8	174	0	0	0	105.2
21	P	91	Very high	96	Very high	188 Å²	188	138.2 Å²	138.2	100%	1.221	79%	0.789	S	S	*	*			trans	-55	0	176	-22.4	32.2	0	0	0	112.8

Retrieved 21 of 21 residues in 10.5 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).