A0A075B6W1_HUMAN Loading...

T cell receptor delta joining 3 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6W1, Species HUMAN (Homo sapiens, Human), Gene TRDJ3, Length 20 aa.

						>A0A075B6W1_HUMAN|A0A075B6W1|TRDJ3
XSWDTRQMFFGTGIKLFVEP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	65.8	Low	81.7	Confident	118 Å²	118	148.5 Å²	148.5	100%	1.216	80%	0.801	S	S	*	*				0	128.1	0	0	0	0	0	0	107.8
2	S	73	Confident	82.9	Confident	122 Å²	122	149.2 Å²	149.2	85%	0.853	81%	0.814	S	S	*	*			trans	-82.7	118.8	173.5	-171.9	0	0	0	0	108	D4	S2-D4 PolarHBondContact O-N 3.09Å
3	W	76.2	Confident	83.9	Confident	228 Å²	228	142.1 Å²	142.1	86%	0.864	80%	0.797	S	S	*	*			trans	-81.2	104.3	169.2	-56.4	96.6	0	0	0	106.4	T5	W3-T5 VanDerWaalsContact C-N 3.29Å; W3-T5 PolarHBondContact O-N 3.36Å
4	D	73.9	Confident	84.8	Confident	110 Å²	110	142.9 Å²	142.9	59%	0.588	80%	0.796	S	S	*	*			trans	-69.3	88.9	176.2	-164	-0.9	0	0	0	108	S2 R6	S2-D4 PolarHBondContact O-N 3.09Å; D4-R6 PolarHBondContact OD2-NH2 2.89Å; D4-R6 IonicContact OD2-NH2 2.81Å; D4-R6 PolarHBondContact OD2-NE 3.38Å; D4-R6 IonicContact OD2-NE 2.9Å; D4-R6 VanDerWaalsContact OD2-CZ 3.29Å; D4-R6 IonicContact OD2-CZ 3.29Å; D4-R6 IonicContact OD1-NE 3.78Å; D4-R6 PolarHBondContact O-N 2.81Å
5	T	75.4	Confident	85.5	Confident	123 Å²	123	145.4 Å²	145.4	76%	0.755	80%	0.795	S	S	*	*			trans	-76.4	69.2	178.9	56.5	0	0	0	0	109.6	W3 Q7	W3-T5 VanDerWaalsContact C-N 3.29Å; W3-T5 PolarHBondContact O-N 3.36Å; T5-Q7 PolarHBondContact O-N 2.9Å
6	R	84.2	Confident	86.1	Confident	191 Å²	191	145.9 Å²	145.9	72%	0.721	80%	0.796	S	S	*	*	P	Polyproline II helix	trans	-65.1	130.6	172.9	-63.1	-174.7	-166.1	168.6	4.7	109	D4	D4-R6 PolarHBondContact OD2-NH2 2.89Å; D4-R6 IonicContact OD2-NH2 2.81Å; D4-R6 PolarHBondContact OD2-NE 3.38Å; D4-R6 IonicContact OD2-NE 2.9Å; D4-R6 VanDerWaalsContact OD2-CZ 3.29Å; D4-R6 IonicContact OD2-CZ 3.29Å; D4-R6 IonicContact OD1-NE 3.78Å; D4-R6 PolarHBondContact O-N 2.81Å
7	Q	85	Confident	86.7	Confident	158 Å²	158	148.3 Å²	148.3	74%	0.738	80%	0.797	S	S	*	*	P	Polyproline II helix	trans	-64.6	138.6	-179.7	-68.3	179.6	-6	0	0	110.3	T5 F9	T5-Q7 PolarHBondContact O-N 2.9Å; Q7-F9 HydrophobicContact CB-CE2 3.93Å; Q7-F9 HydrophobicContact CB-CZ 4.15Å; Q7-F9 VanDerWaalsContact OE1-CZ 3.31Å
8	M	87.4	Confident	87.3	Confident	157 Å²	157	147.8 Å²	147.8	77%	0.773	80%	0.8	S	S	*	*	P	Polyproline II helix	trans	-103.2	125.2	172.5	-64.3	-178.9	-173.7	0	0	108.9	F10	M8-F10 HydrophobicContact CB-CE2 4.05Å; M8-F10 HydrophobicContact CB-CZ 4.29Å
9	F	90.5	Very high	87.6	Confident	174 Å²	174	148.8 Å²	148.8	76%	0.763	80%	0.799	S	S	*	*			trans	-107.2	132.1	173.9	-62.7	-83.3	0	0	0	109.4	Q7	Q7-F9 HydrophobicContact CB-CE2 3.93Å; Q7-F9 HydrophobicContact CB-CZ 4.15Å; Q7-F9 VanDerWaalsContact OE1-CZ 3.31Å
10	F	92.7	Very high	87.8	Confident	180 Å²	180	151.6 Å²	151.6	79%	0.789	83%	0.825	S	S	*	*			trans	-108.7	140.2	176.2	-62.4	-84.6	0	0	0	109.9	M8	M8-F10 HydrophobicContact CB-CE2 4.05Å; M8-F10 HydrophobicContact CB-CZ 4.29Å
11	G	94.4	Very high	87.8	Confident	73 Å²	73	151.6 Å²	151.6	75%	0.753	83%	0.825	S	S	*	*			trans	-75.7	-174.8	168.1	0	0	0	0	0	111.8	G13	G11-G13 PolarHBondContact O-N 2.9Å; G11-G13 VanDerWaalsContact O-N 3.09Å
12	T	96.6	Very high	88.9	Confident	156 Å²	156	153.3 Å²	153.3	96%	0.957	80%	0.804	S	S	*	*			trans	-63.5	-16.7	179.7	55.3	0	0	0	0	114
13	G	96.1	Very high	89.8	Confident	57 Å²	57	155.1 Å²	155.1	59%	0.588	80%	0.802	S	S	*	*			trans	72.3	173.9	-174	0	0	0	0	0	112.8	G11	G11-G13 PolarHBondContact O-N 2.9Å; G11-G13 VanDerWaalsContact O-N 3.09Å
14	I	96.6	Very high	90.6	Very high	154 Å²	154	150.8 Å²	150.8	79%	0.79	80%	0.798	S	S	*	*			trans	-132.2	141.4	174.4	-65.7	169.5	0	0	0	107	L16	I14-L16 HydrophobicContact CG2-CD2 4.06Å
15	K	95	Very high	91.7	Very high	180 Å²	180	153.3 Å²	153.3	78%	0.783	81%	0.811	S	S	*	*			trans	-92.9	127.7	170.9	-66.8	179.6	-178.3	177.7	0	108.7
16	L	95.5	Very high	92.8	Very high	154 Å²	154	155.3 Å²	155.3	81%	0.806	82%	0.815	S	S	*	*			trans	-104.6	134.6	173.4	-59.6	178.6	0	0	0	108.6	I14	I14-L16 HydrophobicContact CG2-CD2 4.06Å
17	F	96.2	Very high	93.4	Very high	186 Å²	186	152.8 Å²	152.8	82%	0.816	82%	0.822	S	S	*	*			trans	-102.7	133.2	172	-63.9	-84.6	0	0	0	108.2
18	V	96	Very high	94	Very high	140 Å²	140	152.4 Å²	152.4	85%	0.848	83%	0.828	S	S	*	*			trans	-115.2	118	175.9	-177.4	0	0	0	0	107.2
19	E	93.8	Very high	94.6	Very high	167 Å²	167	152 Å²	152	78%	0.78	83%	0.833	S	S	*	*			trans	-97	143.4	172.1	-63.3	178.5	176.1	0	0	108.3
20	P	91.5	Very high	94.9	Very high	203 Å²	203	150 Å²	150	100%	1.318	84%	0.839	S	S	*	*			trans	-56.1	0	165.1	-22.3	33.7	0	0	0	112.9

Retrieved 20 of 20 residues in 18.6 ms (Link to these results)

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