A0A075B6W2_HUMAN Loading...

T cell receptor alpha joining 52 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6W2, Species HUMAN (Homo sapiens, Human), Gene TRAJ52, Length 23 aa.

						>A0A075B6W2_HUMAN|A0A075B6W2|TRAJ52
XNAGGTSYGKLTFGQGTILTVHP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	53.6	Low	76.7	Confident	133 Å²	133	121.3 Å²	121.3	100%	1.371	80%	0.797	S	S	*	*				0	123.3	0	0	0	0	0	107.7
2	N	67.8	Low	78.3	Confident	167 Å²	167	120.3 Å²	120.3	89%	0.893	79%	0.786	S	S	*	*			trans	-103.6	91	176.1	-133	-27.5	0	0	106.3	G4	N2-G4 PolarHBondContact O-N 3.43Å
3	A	70.4	Confident	79.5	Confident	99 Å²	99	119.7 Å²	119.7	82%	0.818	76%	0.764	S	S	*	*			trans	-69.4	89.1	169.8	0	0	0	0	106.2	G5	A3-G5 PolarHBondContact O-N 3.36Å
4	G	70.8	Confident	80.8	Confident	67 Å²	67	114.6 Å²	114.6	69%	0.691	75%	0.745	S	S	*	*			trans	-62.3	93.9	169.5	0	0	0	0	107.4	N2 T6	N2-G4 PolarHBondContact O-N 3.43Å; G4-T6 PolarHBondContact O-N 3.08Å; G4-T6 VanDerWaalsContact O-N 3.08Å
5	G	75.2	Confident	81.9	Confident	61 Å²	61	120 Å²	120	63%	0.629	76%	0.756	S	S	*	*			trans	-59.4	115.4	174.4	0	0	0	0	107.7	A3 S7	A3-G5 PolarHBondContact O-N 3.36Å; G5-S7 VanDerWaalsContact C-N 3.25Å; G5-S7 PolarHBondContact O-N 3.17Å
6	T	74.3	Confident	82.9	Confident	110 Å²	110	117.6 Å²	117.6	68%	0.675	76%	0.761	S	S	*	*			trans	-63.9	94	171.3	45.7	0	0	0	107.3	G4 Y8	G4-T6 PolarHBondContact O-N 3.08Å; G4-T6 VanDerWaalsContact O-N 3.08Å; T6-Y8 PolarHBondContact O-N 3.42Å
7	S	81	Confident	83.8	Confident	112 Å²	112	115.2 Å²	115.2	78%	0.783	74%	0.744	S	S	*	*			trans	-73.8	109.2	174.6	-66	0	0	0	107	G5 G9	G5-S7 VanDerWaalsContact C-N 3.25Å; G5-S7 PolarHBondContact O-N 3.17Å; S7-G9 VanDerWaalsContact C-N 3.34Å; S7-G9 PolarHBondContact O-N 3.12Å
8	Y	79.5	Confident	84.5	Confident	206 Å²	206	117.1 Å²	117.1	81%	0.808	75%	0.745	S	S	*	*			trans	-67.5	104.1	162	-55.5	-76.2	0	0	105.3	T6	T6-Y8 PolarHBondContact O-N 3.42Å
9	G	87.6	Confident	85.1	Confident	55 Å²	55	116.8 Å²	116.8	57%	0.567	74%	0.737	S	S	*	*			trans	-56.7	177.8	176.9	0	0	0	0	111.8	S7 L11	S7-G9 VanDerWaalsContact C-N 3.34Å; S7-G9 PolarHBondContact O-N 3.12Å; G9-L11 PolarHBondContact O-N 3.01Å; G9-L11 VanDerWaalsContact O-N 3.12Å
10	K	91.1	Very high	85.7	Confident	190 Å²	190	116 Å²	116	83%	0.826	73%	0.731	S	S	*	*			trans	-60.6	119.1	-178.6	-177.6	177.1	177.7	179.5	111.2
11	L	92.7	Very high	86.1	Confident	134 Å²	134	116 Å²	116	70%	0.702	73%	0.729	S	S	*	*			trans	-79.7	126.6	167.8	-54.3	-178.7	0	0	108.7	G9 F13	G9-L11 PolarHBondContact O-N 3.01Å; G9-L11 VanDerWaalsContact O-N 3.12Å; L11-F13 HydrophobicContact CB-CE2 4.11Å; L11-F13 HydrophobicContact CB-CZ 4.22Å
12	T	95.4	Very high	88	Confident	110 Å²	110	117 Å²	117	68%	0.675	70%	0.698	S	S	*	*			trans	-119.3	128.3	177.9	-58.3	0	0	0	109.2
13	F	94.3	Very high	89.1	Confident	112 Å²	112	118.4 Å²	118.4	49%	0.491	72%	0.717	S	S	.	*			trans	-113	131.2	175.9	-57.5	-73.9	0	0	109.3	L11 T17 L19	L11-F13 HydrophobicContact CB-CE2 4.11Å; L11-F13 HydrophobicContact CB-CZ 4.22Å; F13-T17 HydrophobicContact CG-CG2 4.2Å; F13-T17 HydrophobicContact CB-CG2 3.9Å; F13-T17 HydrophobicContact CD1-CG2 3.8Å; F13-L19 HydrophobicContact CE1-CD1 4.48Å; F13-L19 HydrophobicContact CE2-CD2 4.02Å; F13-L19 HydrophobicContact CZ-CD1 4.22Å; F13-L19 HydrophobicContact CZ-CD2 4.13Å
14	G	97.2	Very high	90.1	Very high	48 Å²	48	119.4 Å²	119.4	50%	0.495	71%	0.712	S	S	.	*			trans	-79.3	176.7	-177.1	0	0	0	0	112.9	G16 T17	G14-G16 PolarHBondContact O-N 2.89Å; G14-T17 WeakPolarHBondContact O-CB 3.35Å; G14-T17 VanDerWaalsContact O-OG1 3.08Å; G14-T17 PolarHBondContact O-OG1 3.08Å; G14-T17 VanDerWaalsContact O-N 3.17Å; G14-T17 PolarHBondContact O-N 2.8Å; G14-T17 PolarHBondContact N-OG1 3.19Å
15	Q	97.7	Very high	91.1	Very high	196 Å²	196	122.2 Å²	122.2	92%	0.916	71%	0.713	S	S	*	*	T	Hydrogen-bonded Turn	trans	-57.6	135.9	176.3	-62.3	-60.8	-62.8	0	110.7	T17	Q15-T17 VanDerWaalsContact C-N 3.26Å; Q15-T17 PolarHBondContact O-N 2.83Å
16	G	98	Very high	92	Very high	81 Å²	81	125.6 Å²	125.6	84%	0.835	72%	0.717	S	S	*	*	T	Hydrogen-bonded Turn	trans	76.5	2.3	-179	0	0	0	0	115.7	G14	G14-G16 PolarHBondContact O-N 2.89Å
17	T	97.8	Very high	93	Very high	78 Å²	78	126.5 Å²	126.5	48%	0.479	72%	0.72	S	S	.	*			trans	-76	129.8	175.8	-57.5	0	0	0	111	F13 G14 Q15	F13-T17 HydrophobicContact CG-CG2 4.2Å; F13-T17 HydrophobicContact CB-CG2 3.9Å; F13-T17 HydrophobicContact CD1-CG2 3.8Å; G14-T17 WeakPolarHBondContact O-CB 3.35Å; G14-T17 VanDerWaalsContact O-OG1 3.08Å; G14-T17 PolarHBondContact O-OG1 3.08Å; G14-T17 VanDerWaalsContact O-N 3.17Å; G14-T17 PolarHBondContact O-N 2.8Å; G14-T17 PolarHBondContact N-OG1 3.19Å; Q15-T17 VanDerWaalsContact C-N 3.26Å; Q15-T17 PolarHBondContact O-N 2.83Å
18	I	97.1	Very high	93.8	Very high	149 Å²	149	127.4 Å²	127.4	76%	0.764	72%	0.716	S	S	*	*			trans	-107.3	117	173.4	-57	174.1	0	0	108.4
19	L	95.4	Very high	94.7	Very high	112 Å²	112	122.1 Å²	122.1	59%	0.586	71%	0.71	S	S	*	*			trans	-95	119	172.4	179.2	64.9	0	0	109.4	F13 V21	F13-L19 HydrophobicContact CE1-CD1 4.48Å; F13-L19 HydrophobicContact CE2-CD2 4.02Å; F13-L19 HydrophobicContact CZ-CD1 4.22Å; F13-L19 HydrophobicContact CZ-CD2 4.13Å; L19-V21 HydrophobicContact CD2-CG2 4.38Å; L19-V21 HydrophobicContact CG-CG2 4.24Å
20	T	97.2	Very high	95.2	Very high	99 Å²	99	126.9 Å²	126.9	61%	0.607	72%	0.72	S	S	*	*			trans	-105.3	123.4	172.7	-53.1	0	0	0	108.9
21	V	94.5	Very high	95.5	Very high	116 Å²	116	122.1 Å²	122.1	70%	0.703	71%	0.712	S	S	*	*			trans	-107.5	125.8	174.8	-178.6	0	0	0	108.6	L19	L19-V21 HydrophobicContact CD2-CG2 4.38Å; L19-V21 HydrophobicContact CG-CG2 4.24Å
22	H	92.9	Very high	95.8	Very high	154 Å²	154	121.1 Å²	121.1	71%	0.713	71%	0.712	S	S	*	*			trans	-96.9	132.5	165.6	-65.4	-83.6	0	0	108.1
23	P	92	Very high	95.8	Very high	198 Å²	198	122.1 Å²	122.1	100%	1.286	72%	0.716	S	S	*	*			trans	-54.8	0	171.7	-23.4	33.7	0	0	112.9

Retrieved 23 of 23 residues in 18.1 ms (Link to these results)

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