A0A075B6W9_HUMAN Loading...

T cell receptor alpha joining 53 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6W9, Species HUMAN (Homo sapiens, Human), Gene TRAJ53, Length 22 aa.

						>A0A075B6W9_HUMAN|A0A075B6W9|TRAJ53
XNSGGSNYKLTFGKGTLLTVNP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	58.9	Low	76.4	Confident	125 Å²	125	125.8 Å²	125.8	100%	1.289	78%	0.778	S	S	*	*				0	133.5	0	0	0	0	0	107.9	S3	G1-S3 VanDerWaalsContact O-N 3.15Å; G1-S3 PolarHBondContact O-N 3.48Å
2	N	65.4	Low	77.9	Confident	168 Å²	168	124.8 Å²	124.8	90%	0.898	76%	0.755	S	S	*	*			trans	-77	100.2	177.5	-141.1	-31.8	0	0	106.9	G4	N2-G4 PolarHBondContact O-N 3.13Å
3	S	71.4	Confident	79.3	Confident	118 Å²	118	119.2 Å²	119.2	83%	0.825	74%	0.737	S	S	*	*			trans	-67.1	87.8	169.8	-80.9	0	0	0	107	X1 G5	G1-S3 VanDerWaalsContact O-N 3.15Å; G1-S3 PolarHBondContact O-N 3.48Å; S3-G5 PolarHBondContact O-N 3.33Å
4	G	66.9	Low	80.6	Confident	66 Å²	66	126.6 Å²	126.6	68%	0.68	75%	0.754	S	S	*	*			trans	-62.8	90.6	164.4	0	0	0	0	106.8	N2 S6	N2-G4 PolarHBondContact O-N 3.13Å; G4-S6 PolarHBondContact O-N 3.24Å
5	G	72.5	Confident	81.8	Confident	61 Å²	61	123.7 Å²	123.7	63%	0.629	76%	0.761	S	S	*	*			trans	-57.2	100.3	164.7	0	0	0	0	105.3	S3 N7	S3-G5 PolarHBondContact O-N 3.33Å; G5-N7 PolarHBondContact O-N 2.8Å; G5-N7 VanDerWaalsContact O-N 3.16Å
6	S	72.4	Confident	82.7	Confident	62 Å²	62	120.8 Å²	120.8	43%	0.434	74%	0.742	S	S	.	*			trans	-55.6	128.1	176.4	17.4	0	0	0	105.8	G4 Y8	G4-S6 PolarHBondContact O-N 3.24Å; S6-Y8 WeakPolarHBondContact O-CD2 3.13Å; S6-Y8 PolarHBondContact O-N 2.99Å; S6-Y8 WeakPolarHBondContact OG-CE2 3.37Å; S6-Y8 PolarHBondContact OG-OH 2.68Å
7	N	76.9	Confident	83.6	Confident	163 Å²	163	122.8 Å²	122.8	87%	0.872	75%	0.747	S	S	*	*			trans	-65.1	77.6	179.4	-66.2	-63.4	0	0	108.6	G5 K9	G5-N7 PolarHBondContact O-N 2.8Å; G5-N7 VanDerWaalsContact O-N 3.16Å; N7-K9 PolarHBondContact O-N 3.45Å
8	Y	81	Confident	84.2	Confident	199 Å²	199	121.9 Å²	121.9	78%	0.78	74%	0.736	S	S	*	*			trans	-69.7	86.4	179.2	-65.5	-70.2	0	0	108	S6	S6-Y8 WeakPolarHBondContact O-CD2 3.13Å; S6-Y8 PolarHBondContact O-N 2.99Å; S6-Y8 WeakPolarHBondContact OG-CE2 3.37Å; S6-Y8 PolarHBondContact OG-OH 2.68Å
9	K	88.7	Confident	84.9	Confident	174 Å²	174	121.1 Å²	121.1	76%	0.757	73%	0.732	S	S	*	*			trans	-90.1	110.6	175.8	-173.5	-180	178.8	179.5	108.9	N7 T11	N7-K9 PolarHBondContact O-N 3.45Å; K9-T11 PolarHBondContact O-N 2.8Å
10	L	92.1	Very high	85.4	Confident	143 Å²	143	120.6 Å²	120.6	75%	0.749	73%	0.729	S	S	*	*			trans	-75.7	119.9	165.8	-55.7	-179.8	0	0	108	F12	L10-F12 HydrophobicContact CB-CE2 4Å; L10-F12 HydrophobicContact CB-CZ 4.11Å
11	T	94.5	Very high	85.7	Confident	105 Å²	105	121.4 Å²	121.4	64%	0.644	73%	0.729	S	S	*	*			trans	-116	128.2	178.2	-59	0	0	0	109	K9	K9-T11 PolarHBondContact O-N 2.8Å
12	F	94	Very high	87.3	Confident	114 Å²	114	124.9 Å²	124.9	50%	0.5	73%	0.729	S	S	.	*			trans	-116.8	128.5	176.6	-57	-70.7	0	0	109.2	L10 T16 L18	L10-F12 HydrophobicContact CB-CE2 4Å; L10-F12 HydrophobicContact CB-CZ 4.11Å; F12-T16 HydrophobicContact CG-CG2 4.23Å; F12-T16 HydrophobicContact CD1-CG2 3.81Å; F12-T16 HydrophobicContact CB-CG2 3.99Å; F12-L18 HydrophobicContact CE1-CD1 4.46Å; F12-L18 HydrophobicContact CE2-CD2 4.13Å; F12-L18 HydrophobicContact CZ-CD1 4.24Å; F12-L18 HydrophobicContact CZ-CD2 4.17Å
13	G	96.8	Very high	88.4	Confident	51 Å²	51	122.7 Å²	122.7	53%	0.526	72%	0.721	S	S	.	*			trans	-82.8	175.6	-177.9	0	0	0	0	112.8	G15 T16	G13-G15 PolarHBondContact O-N 3.16Å; G13-T16 PolarHBondContact N-OG1 2.83Å; G13-T16 WeakPolarHBondContact O-CB 3.03Å; G13-T16 PolarHBondContact O-N 2.82Å; G13-T16 VanDerWaalsContact O-N 3.13Å; G13-T16 PolarHBondContact O-OG1 3.15Å
14	K	97.5	Very high	89.3	Confident	223 Å²	223	122.9 Å²	122.9	97%	0.97	72%	0.715	S	S	*	*	T	Hydrogen-bonded Turn	trans	-55	129.9	176.8	-174.8	-177.4	-175.9	179.8	110.7	T16	K14-T16 VanDerWaalsContact C-N 3.34Å
15	G	97.8	Very high	90.5	Very high	83 Å²	83	126.1 Å²	126.1	86%	0.856	72%	0.717	S	S	*	*	T	Hydrogen-bonded Turn	trans	84.4	1.8	178.8	0	0	0	0	115	G13 L17	G13-G15 PolarHBondContact O-N 3.16Å; G15-L17 PolarHBondContact O-N 2.83Å
16	T	97.6	Very high	91.6	Very high	77 Å²	77	129.9 Å²	129.9	47%	0.472	72%	0.722	S	S	.	*			trans	-72.4	128.2	174.8	-50.4	0	0	0	110.5	F12 G13 K14	F12-T16 HydrophobicContact CG-CG2 4.23Å; F12-T16 HydrophobicContact CD1-CG2 3.81Å; F12-T16 HydrophobicContact CB-CG2 3.99Å; G13-T16 PolarHBondContact N-OG1 2.83Å; G13-T16 WeakPolarHBondContact O-CB 3.03Å; G13-T16 PolarHBondContact O-N 2.82Å; G13-T16 VanDerWaalsContact O-N 3.13Å; G13-T16 PolarHBondContact O-OG1 3.15Å; K14-T16 VanDerWaalsContact C-N 3.34Å
17	L	97.1	Very high	92.8	Very high	155 Å²	155	134.2 Å²	134.2	81%	0.812	74%	0.74	S	S	*	*			trans	-105.1	116.3	168.5	-176.2	64.1	0	0	109.1	G15	G15-L17 PolarHBondContact O-N 2.83Å
18	L	95.4	Very high	93.9	Very high	108 Å²	108	132.3 Å²	132.3	57%	0.565	73%	0.731	S	S	*	*			trans	-95.2	126.7	173.1	179.7	66.3	0	0	109.2	F12 V20	F12-L18 HydrophobicContact CE1-CD1 4.46Å; F12-L18 HydrophobicContact CE2-CD2 4.13Å; F12-L18 HydrophobicContact CZ-CD1 4.24Å; F12-L18 HydrophobicContact CZ-CD2 4.17Å; L18-V20 HydrophobicContact CD2-CG2 4.27Å; L18-V20 HydrophobicContact CG-CG2 4.22Å
19	T	97.1	Very high	94.8	Very high	106 Å²	106	127.5 Å²	127.5	65%	0.65	73%	0.728	S	S	*	*			trans	-114.4	123.1	171.5	-54.3	0	0	0	108.5
20	V	94.2	Very high	95.3	Very high	111 Å²	111	123.9 Å²	123.9	67%	0.673	73%	0.726	S	S	*	*			trans	-107	122.3	175.1	-179	0	0	0	108	L18	L18-V20 HydrophobicContact CD2-CG2 4.27Å; L18-V20 HydrophobicContact CG-CG2 4.22Å
21	N	92.7	Very high	95.5	Very high	137 Å²	137	122.3 Å²	122.3	73%	0.733	72%	0.724	S	S	*	*			trans	-91.2	130	161.8	-61.5	-52.3	0	0	107.2
22	P	91.9	Very high	95.6	Very high	198 Å²	198	123.9 Å²	123.9	100%	1.286	73%	0.731	S	S	*	*			trans	-54.1	0	174.9	-23.4	33.2	0	0	113.3

Retrieved 22 of 22 residues in 27.5 ms (Link to these results)

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