A0A075B6X9_HUMAN Loading...

T cell receptor alpha joining 18 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6X9, Species HUMAN (Homo sapiens, Human), Gene TRAJ18, Length 22 aa.

						>A0A075B6X9_HUMAN|A0A075B6X9|TRAJ18
XDRGSTLGRLYFGRGTQLTVWP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	57.6	Low	73.6	Confident	125 Å²	125	133.7 Å²	133.7	100%	1.289	77%	0.766	S	S	*	*				0	110	0	0	0	0	0	0	107.3	R3	G1-R3 PolarHBondContact O-N 3.5Å; G1-R3 VanDerWaalsContact C-N 3.25Å
2	D	62.3	Low	75.2	Confident	153 Å²	153	131.8 Å²	131.8	82%	0.818	74%	0.742	S	S	*	*			trans	-61.6	92.9	167.1	164.5	1.4	0	0	0	107.2	G4	D2-G4 WeakPolarHBondContact OD1-CA 3.31Å; D2-G4 PolarHBondContact OD1-N 2.9Å; D2-G4 VanDerWaalsContact OD1-CA 3.29Å
3	R	66.3	Low	76.8	Confident	240 Å²	240	125.6 Å²	125.6	91%	0.906	73%	0.726	S	S	*	*			trans	-97.5	64.7	157.6	-67.4	-173.6	-175.7	164.1	1.6	106	X1 S5	G1-R3 PolarHBondContact O-N 3.5Å; G1-R3 VanDerWaalsContact C-N 3.25Å; R3-S5 PolarHBondContact O-N 3.08Å
4	G	64.1	Low	78.2	Confident	49 Å²	49	135.1 Å²	135.1	51%	0.505	74%	0.744	S	S	.	*			trans	-45.7	116.3	168.8	0	0	0	0	0	107.5	D2 T6	D2-G4 WeakPolarHBondContact OD1-CA 3.31Å; D2-G4 PolarHBondContact OD1-N 2.9Å; D2-G4 VanDerWaalsContact OD1-CA 3.29Å; G4-T6 PolarHBondContact O-N 3.31Å
5	S	65.3	Low	79.5	Confident	90 Å²	90	131.9 Å²	131.9	63%	0.629	75%	0.754	S	S	*	*			trans	-44	107.1	-171.9	49.2	0	0	0	0	111.4	R3 L7	R3-S5 PolarHBondContact O-N 3.08Å; S5-L7 PolarHBondContact O-N 3.31Å; S5-L7 VanDerWaalsContact O-N 3.15Å
6	T	67.9	Low	80.7	Confident	118 Å²	118	128.6 Å²	128.6	72%	0.724	74%	0.737	S	S	*	*			trans	-66.2	-3.5	162.1	52.5	0	0	0	0	111.8	G4 G8 R9	G4-T6 PolarHBondContact O-N 3.31Å; T6-G8 PolarHBondContact O-N 3.39Å; T6-R9 PolarHBondContact O-N 3.36Å
7	L	75.8	Confident	81.6	Confident	156 Å²	156	131.1 Å²	131.1	82%	0.817	74%	0.741	S	S	*	*	T	Hydrogen-bonded Turn	trans	-62.7	99.1	175.2	-55.1	174.9	0	0	0	109	S5	S5-L7 PolarHBondContact O-N 3.31Å; S5-L7 VanDerWaalsContact O-N 3.15Å
8	G	80.9	Confident	82.4	Confident	73 Å²	73	129.6 Å²	129.6	75%	0.753	73%	0.73	S	S	*	*	T	Hydrogen-bonded Turn	trans	117.4	-7.6	174	0	0	0	0	0	115.2	T6 L10	T6-G8 PolarHBondContact O-N 3.39Å; G8-L10 PolarHBondContact O-N 3.18Å
9	R	87.1	Confident	83.1	Confident	172 Å²	172	127.2 Å²	127.2	65%	0.649	72%	0.718	S	S	*	*			trans	-84	110.3	175	-167.1	162	170.7	-174.1	-4.3	110.6	T6 Y11	T6-R9 PolarHBondContact O-N 3.36Å; R9-Y11 VanDerWaalsContact CD-CZ 3.49Å; R9-Y11 PolarHBondContact NH1-OH 3.15Å; R9-Y11 PolarHBondContact NE-OH 2.97Å; R9-Y11 VanDerWaalsContact CZ-CE1 3.43Å; R9-Y11 HydrophobicContact CG-CE2 3.7Å; R9-Y11 HydrophobicContact CG-CE1 4.33Å; R9-Y11 HydrophobicContact CG-CD2 4.19Å; R9-Y11 WeakPolarHBondContact CD-OH 3.32Å; R9-Y11 VanDerWaalsContact CD-OH 3.32Å; R9-Y11 HydrophobicContact CB-CE2 4.18Å
10	L	90.6	Very high	83.7	Confident	133 Å²	133	126.4 Å²	126.4	70%	0.696	72%	0.716	S	S	*	*			trans	-91.4	126.7	169.9	-57.6	176.8	0	0	0	108.6	G8 F12	G8-L10 PolarHBondContact O-N 3.18Å; L10-F12 HydrophobicContact CD1-CZ 4.19Å; L10-F12 HydrophobicContact CB-CZ 3.84Å; L10-F12 HydrophobicContact CB-CE2 3.7Å; L10-F12 HydrophobicContact CD1-CE2 4.48Å
11	Y	91.9	Very high	84.1	Confident	162 Å²	162	130.4 Å²	130.4	64%	0.635	72%	0.72	S	S	*	*			trans	-106.1	126.3	174.7	-66.2	-92	0	0	0	109.1	R9	R9-Y11 VanDerWaalsContact CD-CZ 3.49Å; R9-Y11 PolarHBondContact NH1-OH 3.15Å; R9-Y11 PolarHBondContact NE-OH 2.97Å; R9-Y11 VanDerWaalsContact CZ-CE1 3.43Å; R9-Y11 HydrophobicContact CG-CE2 3.7Å; R9-Y11 HydrophobicContact CG-CE1 4.33Å; R9-Y11 HydrophobicContact CG-CD2 4.19Å; R9-Y11 WeakPolarHBondContact CD-OH 3.32Å; R9-Y11 VanDerWaalsContact CD-OH 3.32Å; R9-Y11 HydrophobicContact CB-CE2 4.18Å
12	F	92.5	Very high	85.8	Confident	110 Å²	110	133.9 Å²	133.9	48%	0.482	72%	0.72	S	S	.	*			trans	-115.1	119.6	173.1	-58.1	-71.5	0	0	0	108.6	L10 T16 L18	L10-F12 HydrophobicContact CD1-CZ 4.19Å; L10-F12 HydrophobicContact CB-CZ 3.84Å; L10-F12 HydrophobicContact CB-CE2 3.7Å; L10-F12 HydrophobicContact CD1-CE2 4.48Å; F12-T16 HydrophobicContact CB-CG2 4.05Å; F12-T16 HydrophobicContact CD1-CG2 3.83Å; F12-T16 HydrophobicContact CG-CG2 4.35Å; F12-L18 HydrophobicContact CE1-CD1 4.19Å; F12-L18 HydrophobicContact CE2-CD2 3.93Å; F12-L18 HydrophobicContact CZ-CD1 4.06Å; F12-L18 HydrophobicContact CZ-CD2 3.89Å; F12-L18 HydrophobicContact CZ-CG 4.46Å
13	G	96	Very high	86.9	Confident	52 Å²	52	132.9 Å²	132.9	54%	0.536	72%	0.715	S	S	.	*			trans	-75.4	174.5	-177.6	0	0	0	0	0	112.6	G15 T16	G13-G15 PolarHBondContact O-N 3.3Å; G13-T16 PolarHBondContact N-OG1 2.72Å; G13-T16 PolarHBondContact O-OG1 2.9Å; G13-T16 VanDerWaalsContact O-N 3.08Å; G13-T16 PolarHBondContact O-N 2.97Å; G13-T16 WeakPolarHBondContact O-CB 3.29Å; G13-T16 VanDerWaalsContact O-CB 3.31Å
14	R	97.1	Very high	88	Confident	259 Å²	259	127.3 Å²	127.3	98%	0.977	71%	0.705	S	S	*	*	T	Hydrogen-bonded Turn	trans	-57.8	132.8	178.8	-57.4	178.3	90.5	175.6	6	110	T16	R14-T16 VanDerWaalsContact C-N 3.31Å; R14-T16 PolarHBondContact O-N 3.04Å
15	G	97.6	Very high	89.3	Confident	87 Å²	87	131.6 Å²	131.6	90%	0.897	72%	0.716	S	S	*	*	T	Hydrogen-bonded Turn	trans	80.7	2.1	-178.8	0	0	0	0	0	115.4	G13	G13-G15 PolarHBondContact O-N 3.3Å
16	T	97.5	Very high	90.7	Very high	78 Å²	78	134.1 Å²	134.1	48%	0.479	72%	0.721	S	S	.	*			trans	-78.1	129.9	175.7	-51.6	0	0	0	0	110.7	F12 G13 R14	F12-T16 HydrophobicContact CB-CG2 4.05Å; F12-T16 HydrophobicContact CD1-CG2 3.83Å; F12-T16 HydrophobicContact CG-CG2 4.35Å; G13-T16 PolarHBondContact N-OG1 2.72Å; G13-T16 PolarHBondContact O-OG1 2.9Å; G13-T16 VanDerWaalsContact O-N 3.08Å; G13-T16 PolarHBondContact O-N 2.97Å; G13-T16 WeakPolarHBondContact O-CB 3.29Å; G13-T16 VanDerWaalsContact O-CB 3.31Å; R14-T16 VanDerWaalsContact C-N 3.31Å; R14-T16 PolarHBondContact O-N 3.04Å
17	Q	96.9	Very high	92.2	Very high	171 Å²	171	135.1 Å²	135.1	80%	0.799	72%	0.721	S	S	*	*			trans	-108.4	118.9	170.6	-175.9	174.1	-14.9	0	0	109.3
18	L	95.1	Very high	93.3	Very high	105 Å²	105	133.7 Å²	133.7	55%	0.55	72%	0.715	S	S	.	*			trans	-95.1	125.8	173.5	179.8	66.9	0	0	0	109.2	F12 V20	F12-L18 HydrophobicContact CE1-CD1 4.19Å; F12-L18 HydrophobicContact CE2-CD2 3.93Å; F12-L18 HydrophobicContact CZ-CD1 4.06Å; F12-L18 HydrophobicContact CZ-CD2 3.89Å; F12-L18 HydrophobicContact CZ-CG 4.46Å; L18-V20 HydrophobicContact CD2-CG2 4.07Å; L18-V20 HydrophobicContact CG-CG2 4.04Å
19	T	96.9	Very high	94.2	Very high	83 Å²	83	138 Å²	138	51%	0.509	71%	0.712	S	S	.	*			trans	-112.6	121.2	170.2	-57.6	0	0	0	0	108.2	W21	T19-W21 HydrophobicContact CG2-CZ2 4.03Å
20	V	94.1	Very high	94.7	Very high	112 Å²	112	135.4 Å²	135.4	68%	0.679	72%	0.717	S	S	*	*			trans	-107.5	128.2	175.3	-178.3	0	0	0	0	108.2	L18	L18-V20 HydrophobicContact CD2-CG2 4.07Å; L18-V20 HydrophobicContact CG-CG2 4.04Å
21	W	92.8	Very high	95	Very high	210 Å²	210	135.6 Å²	135.6	80%	0.795	72%	0.719	S	S	*	*			trans	-98.6	137.4	166.4	-56.5	94.2	0	0	0	107.6	T19	T19-W21 HydrophobicContact CG2-CZ2 4.03Å
22	P	92.3	Very high	95.3	Very high	198 Å²	198	133.2 Å²	133.2	100%	1.286	73%	0.726	S	S	*	*			trans	-52.5	0	173.1	-25.3	34.7	0	0	0	113.2

Retrieved 22 of 22 residues in 22.7 ms (Link to these results)

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