A0A075B6Y2_HUMAN Loading...

T cell receptor alpha joining 35 (non-functional) AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Y2, Species HUMAN (Homo sapiens, Human), Gene TRAJ35, Length 20 aa.

						>A0A075B6Y2_HUMAN|A0A075B6Y2|TRAJ35
XIGFGNVLHCGSGTQVIVLP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	46.1	Very low	67.2	Low	133 Å²	133	127.6 Å²	127.6	100%	1.371	83%	0.831	S	S	*	*				0	119.8	0	0	0	0	107.7
2	I	63.9	Low	68.2	Low	153 Å²	153	127.4 Å²	127.4	79%	0.785	83%	0.834	S	S	*	*			trans	-82.6	114.9	-175.4	25.5	178.5	0	108.8	F4	I2-F4 HydrophobicContact CB-CD2 4.48Å; I2-F4 HydrophobicContact CB-CE2 4.04Å; I2-F4 HydrophobicContact CD1-CE2 4.14Å; I2-F4 HydrophobicContact CG1-CE2 4.26Å; I2-F4 WeakPolarHBondContact O-CD2 3.48Å; I2-F4 PolarHBondContact O-N 3.38Å
3	G	59.7	Low	69.1	Low	80 Å²	80	122.4 Å²	122.4	83%	0.825	82%	0.819	S	S	*	*			trans	-72.5	106.1	-174.6	0	0	0	112.4
4	F	67.8	Low	70.2	Confident	182 Å²	182	123.1 Å²	123.1	80%	0.798	82%	0.819	S	S	*	*			trans	-110.8	29.8	165.1	-67.4	-84.1	0	111.1	I2	I2-F4 HydrophobicContact CB-CD2 4.48Å; I2-F4 HydrophobicContact CB-CE2 4.04Å; I2-F4 HydrophobicContact CD1-CE2 4.14Å; I2-F4 HydrophobicContact CG1-CE2 4.26Å; I2-F4 WeakPolarHBondContact O-CD2 3.48Å; I2-F4 PolarHBondContact O-N 3.38Å
5	G	65.8	Low	71.1	Confident	77 Å²	77	126.6 Å²	126.6	79%	0.794	82%	0.819	S	S	*	*			trans	-97.2	15.4	-169.7	0	0	0	115.9
6	N	69.5	Low	72.1	Confident	151 Å²	151	126.4 Å²	126.4	81%	0.807	81%	0.814	S	S	*	*			trans	-138.3	66.6	-175.5	-149.2	13.1	0	111.9
7	V	69.8	Low	73.1	Confident	127 Å²	127	127.2 Å²	127.2	77%	0.77	81%	0.809	S	S	*	*			trans	-97.8	87.5	166	-174	0	0	107.4	H9	V7-H9 PolarHBondContact O-N 3.36Å; V7-H9 VanDerWaalsContact O-N 3.15Å
8	L	73.2	Confident	73.9	Confident	157 Å²	157	127.3 Å²	127.3	82%	0.822	81%	0.807	S	S	*	*			trans	-76.4	96.2	167.5	-177.8	66.8	0	107.9	C10	L8-C10 PolarHBondContact O-N 2.99Å; L8-C10 VanDerWaalsContact O-N 3.14Å
9	H	73.8	Confident	74.6	Confident	172 Å²	172	128.1 Å²	128.1	80%	0.796	80%	0.804	S	S	*	*			trans	-77.4	97	173.6	-144.2	164.7	0	108	V7 G11	V7-H9 PolarHBondContact O-N 3.36Å; V7-H9 VanDerWaalsContact O-N 3.15Å; H9-G11 PolarHBondContact O-N 3.17Å
10	C	76.6	Confident	75.1	Confident	113 Å²	113	131.7 Å²	131.7	76%	0.764	83%	0.829	S	S	*	*			trans	-69.3	110.4	170.2	-170.6	0	0	107.7	L8	L8-C10 PolarHBondContact O-N 2.99Å; L8-C10 VanDerWaalsContact O-N 3.14Å
11	G	73.2	Confident	75.1	Confident	59 Å²	59	131.7 Å²	131.7	61%	0.608	83%	0.829	S	S	*	*			trans	-57	138.8	175.9	0	0	0	110.4	H9 G13	H9-G11 PolarHBondContact O-N 3.17Å; G11-G13 PolarHBondContact O-N 3.14Å
12	S	78.8	Confident	76.6	Confident	125 Å²	125	131.6 Å²	131.6	87%	0.874	80%	0.8	S	S	*	*			trans	-55.3	109.9	176.3	-175.2	0	0	109.3
13	G	80	Confident	77.3	Confident	62 Å²	62	130.4 Å²	130.4	64%	0.639	80%	0.801	S	S	*	*	P	Polyproline II helix	trans	-65.9	135.3	179.9	0	0	0	111	G11 Q15	G11-G13 PolarHBondContact O-N 3.14Å; G13-Q15 PolarHBondContact O-N 3.15Å
14	T	84.3	Confident	78.3	Confident	132 Å²	132	133.4 Å²	133.4	81%	0.81	80%	0.799	S	S	*	*	P	Polyproline II helix	trans	-65.7	123.9	169.5	-55.4	0	0	109	V16	T14-V16 PolarHBondContact O-N 3.24Å
15	Q	84.3	Confident	79	Confident	176 Å²	176	130.3 Å²	130.3	82%	0.822	80%	0.8	S	S	*	*	P	Polyproline II helix	trans	-75.5	117.5	172.2	-65.4	-177.1	82.8	108.8	G13	G13-Q15 PolarHBondContact O-N 3.15Å
16	V	86.3	Confident	79.9	Confident	123 Å²	123	133.9 Å²	133.9	75%	0.745	80%	0.8	S	S	*	*			trans	-97.1	115	170.3	-178.9	0	0	107.6	T14 V18	T14-V16 PolarHBondContact O-N 3.24Å; V16-V18 HydrophobicContact CG1-CG2 4.35Å
17	I	89.7	Confident	80.6	Confident	140 Å²	140	132.6 Å²	132.6	72%	0.718	80%	0.799	S	S	*	*			trans	-96.9	117.2	174.5	-57.5	170.9	0	107
18	V	87.3	Confident	81.5	Confident	129 Å²	129	133.1 Å²	133.1	78%	0.782	80%	0.802	S	S	*	*			trans	-95.4	113.3	170.9	-177.8	0	0	107.3	V16	V16-V18 HydrophobicContact CG1-CG2 4.35Å
19	L	87	Confident	82.2	Confident	143 Å²	143	131.1 Å²	131.1	75%	0.749	80%	0.8	S	S	*	*			trans	-77.7	147.4	170.4	-73	144.5	0	108.9
20	P	84.6	Confident	82.9	Confident	199 Å²	199	127.4 Å²	127.4	100%	1.292	80%	0.8	S	S	*	*			trans	-59.5	0	-174.6	26.5	-35.9	0	113.9

Retrieved 20 of 20 residues in 7 ms (Link to these results)

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