A0A075B6Y4_HUMAN Loading...

T cell receptor alpha joining 19 (non-functional) AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Y4, Species HUMAN (Homo sapiens, Human), Gene TRAJ19, Length 20 aa.

						>A0A075B6Y4_HUMAN|A0A075B6Y4|TRAJ19
XYQRFYNFTFGKGSKHNVTP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	73.7	Confident	80.8	Confident	133 Å²	133	164.1 Å²	164.1	100%	1.371	83%	0.831	S	S	*	*				0	135.8	0	0	0	0	0	0	108.7	Q3	G1-Q3 PolarHBondContact O-N 3.34Å
2	Y	78.8	Confident	81	Confident	241 Å²	241	168.8 Å²	168.8	95%	0.945	84%	0.841	S	S	*	*			trans	-80.4	111.6	175.1	-115.2	-95.8	0	0	0	109	R4	Y2-R4 PolarHBondContact O-N 3.43Å
3	Q	79.3	Confident	81.1	Confident	151 Å²	151	161.8 Å²	161.8	71%	0.706	84%	0.838	S	S	*	*			trans	-71.3	115.1	171.6	-166.7	98	71.1	0	0	108	X1 F5	G1-Q3 PolarHBondContact O-N 3.34Å; Q3-F5 HydrophobicContact CB-CE2 4.02Å; Q3-F5 HydrophobicContact CB-CZ 4.24Å; Q3-F5 HydrophobicContact CG-CD2 4.5Å; Q3-F5 HydrophobicContact CG-CE1 4.11Å; Q3-F5 HydrophobicContact CG-CE2 3.91Å; Q3-F5 HydrophobicContact CG-CZ 3.7Å; Q3-F5 PolarHBondContact O-N 3.48Å
4	R	77.8	Confident	81.4	Confident	241 Å²	241	158.5 Å²	158.5	91%	0.909	84%	0.836	S	S	*	*			trans	-85.4	110.7	175.1	-165.2	175.9	-169	173.1	2.7	108.6	Y2	Y2-R4 PolarHBondContact O-N 3.43Å
5	F	80.7	Confident	81.6	Confident	168 Å²	168	161.1 Å²	161.1	74%	0.737	84%	0.838	S	S	*	*			trans	-85.4	129.4	170.4	-63.4	-81.5	0	0	0	109.3	Q3	Q3-F5 HydrophobicContact CB-CE2 4.02Å; Q3-F5 HydrophobicContact CB-CZ 4.24Å; Q3-F5 HydrophobicContact CG-CD2 4.5Å; Q3-F5 HydrophobicContact CG-CE1 4.11Å; Q3-F5 HydrophobicContact CG-CE2 3.91Å; Q3-F5 HydrophobicContact CG-CZ 3.7Å; Q3-F5 PolarHBondContact O-N 3.48Å
6	Y	83.2	Confident	81.9	Confident	214 Å²	214	161 Å²	161	84%	0.839	83%	0.832	S	S	*	*			trans	-80.2	122.2	170.4	-174.3	-98.4	0	0	0	108.3	F8	Y6-F8 PolarHBondContact O-N 3.32Å
7	N	79.8	Confident	82.1	Confident	144 Å²	144	158.9 Å²	158.9	77%	0.77	82%	0.822	S	S	*	*			trans	-76.1	113.8	174.7	-81	-34.9	0	0	0	109.1
8	F	84.4	Confident	82.1	Confident	144 Å²	144	155.8 Å²	155.8	63%	0.632	81%	0.811	S	S	*	*			trans	-85.8	129.9	166.1	-173.6	-95.3	0	0	0	109.2	Y6 F10	Y6-F8 PolarHBondContact O-N 3.32Å; F8-F10 HydrophobicContact CE1-CZ 3.8Å; F8-F10 AromaticContact CE1-CZ 3.8Å; F8-F10 HydrophobicContact CE1-CG 3.93Å; F8-F10 AromaticContact CE1-CG 3.93Å; F8-F10 HydrophobicContact CE1-CE2 3.96Å; F8-F10 AromaticContact CE1-CE2 3.96Å; F8-F10 HydrophobicContact CE1-CE1 3.7Å; F8-F10 HydrophobicContact CE1-CD1 3.77Å; F8-F10 AromaticContact CE1-CE1 3.7Å; F8-F10 HydrophobicContact CE1-CD2 4.02Å; F8-F10 AromaticContact CE1-CD1 3.77Å; F8-F10 HydrophobicContact CD1-CZ 4.15Å; F8-F10 HydrophobicContact CD1-CG 4.44Å; F8-F10 HydrophobicContact CD1-CE2 3.95Å; F8-F10 AromaticContact CD1-CE2 3.95Å; F8-F10 HydrophobicContact CD1-CE1 4.48Å; F8-F10 HydrophobicContact CD1-CD2 4.1Å
9	T	84.5	Confident	82.1	Confident	116 Å²	116	153.5 Å²	153.5	71%	0.712	81%	0.805	S	S	*	*			trans	-113.5	127.2	172.7	53.9	0	0	0	0	109.3	G11	T9-G11 PolarHBondContact O-N 3.39Å
10	F	82.1	Confident	81.8	Confident	184 Å²	184	155.4 Å²	155.4	81%	0.807	83%	0.826	S	S	*	*	P	Polyproline II helix	trans	-70.8	124	170.9	-73.4	-86.4	0	0	0	109.7	F8	F8-F10 HydrophobicContact CE1-CZ 3.8Å; F8-F10 AromaticContact CE1-CZ 3.8Å; F8-F10 HydrophobicContact CE1-CG 3.93Å; F8-F10 AromaticContact CE1-CG 3.93Å; F8-F10 HydrophobicContact CE1-CE2 3.96Å; F8-F10 AromaticContact CE1-CE2 3.96Å; F8-F10 HydrophobicContact CE1-CE1 3.7Å; F8-F10 HydrophobicContact CE1-CD1 3.77Å; F8-F10 AromaticContact CE1-CE1 3.7Å; F8-F10 HydrophobicContact CE1-CD2 4.02Å; F8-F10 AromaticContact CE1-CD1 3.77Å; F8-F10 HydrophobicContact CD1-CZ 4.15Å; F8-F10 HydrophobicContact CD1-CG 4.44Å; F8-F10 HydrophobicContact CD1-CE2 3.95Å; F8-F10 AromaticContact CD1-CE2 3.95Å; F8-F10 HydrophobicContact CD1-CE1 4.48Å; F8-F10 HydrophobicContact CD1-CD2 4.1Å
11	G	84.1	Confident	81.8	Confident	69 Å²	69	155.4 Å²	155.4	71%	0.711	83%	0.826	S	S	*	*	P	Polyproline II helix	trans	-62.2	153.1	170.1	0	0	0	0	0	110.8	T9 G13	T9-G11 PolarHBondContact O-N 3.39Å; G11-G13 PolarHBondContact O-N 3.18Å
12	K	83.3	Confident	82.3	Confident	220 Å²	220	156.5 Å²	156.5	96%	0.957	80%	0.798	S	S	*	*	P	Polyproline II helix	trans	-63.8	119.7	171.3	-68.9	-180	179	176.6	0	107.8
13	G	83.1	Confident	82.4	Confident	78 Å²	78	151.8 Å²	151.8	80%	0.804	79%	0.79	S	S	*	*	P	Polyproline II helix	trans	-56.3	143.2	-178.2	0	0	0	0	0	111.9	G11	G11-G13 PolarHBondContact O-N 3.18Å
14	S	85	Confident	82.6	Confident	116 Å²	116	151.9 Å²	151.9	81%	0.811	79%	0.794	S	S	*	*	P	Polyproline II helix	trans	-82.4	133.6	172.8	55.6	0	0	0	0	110.1	H16	S14-H16 PolarHBondContact O-N 3.41Å
15	K	84.4	Confident	82.9	Confident	197 Å²	197	146.3 Å²	146.3	86%	0.857	79%	0.787	S	S	*	*			trans	-74.2	109.1	171	-169.6	175.6	-177.4	-179.4	0	108.9	N17	K15-N17 PolarHBondContact O-N 3.48Å
16	H	86	Confident	83.1	Confident	160 Å²	160	144.9 Å²	144.9	74%	0.741	79%	0.791	S	S	*	*			trans	-79.4	116.1	170.1	-173.5	64.6	0	0	0	108.5	S14 V18	S14-H16 PolarHBondContact O-N 3.41Å; H16-V18 WeakPolarHBondContact CD2-CG2 3.36Å; H16-V18 PolarHBondContact O-N 3.44Å
17	N	84.8	Confident	83.1	Confident	125 Å²	125	139.9 Å²	139.9	67%	0.668	79%	0.787	S	S	*	*			trans	-91.1	98.2	176.6	-166.5	65	0	0	0	108.3	K15 T19	K15-N17 PolarHBondContact O-N 3.48Å; N17-T19 PolarHBondContact O-N 3.23Å
18	V	82	Confident	83.3	Confident	104 Å²	104	139.6 Å²	139.6	63%	0.63	79%	0.788	S	S	*	*			trans	-76.8	116	169.6	-176.5	0	0	0	0	107	H16	H16-V18 WeakPolarHBondContact CD2-CG2 3.36Å; H16-V18 PolarHBondContact O-N 3.44Å
19	T	82.3	Confident	83.2	Confident	112 Å²	112	139.3 Å²	139.3	69%	0.687	80%	0.802	S	S	*	*			trans	-76	128.2	164.3	-39.7	0	0	0	0	107.1	N17	N17-T19 PolarHBondContact O-N 3.23Å
20	P	77.2	Confident	83.1	Confident	190 Å²	190	141.4 Å²	141.4	100%	1.234	81%	0.81	S	S	*	*			trans	-61	0	173.1	28.2	-34.8	0	0	0	111.8

Retrieved 20 of 20 residues in 21.1 ms (Link to these results)

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