A0A075B6Y5_HUMAN Loading...

T cell receptor alpha joining 47 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Y5, Species HUMAN (Homo sapiens, Human), Gene TRAJ47, Length 19 aa.

						>A0A075B6Y5_HUMAN|A0A075B6Y5|TRAJ47
XEYGNKLVFGAGTILRVKS
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	74.4	Confident	86.7	Confident	94 Å²	94	127.4 Å²	127.4	97%	0.969	75%	0.747	S	S	*	*				0	146	0	0	0	0	0	0	108	Y3	G1-Y3 VanDerWaalsContact O-CE2 3.31Å; G1-Y3 WeakPolarHBondContact O-CE2 3.19Å; G1-Y3 PolarHBondContact O-N 3.37Å; G1-Y3 WeakPolarHBondContact O-CD2 3.28Å
2	E	74.4	Confident	87.6	Confident	161 Å²	161	123.3 Å²	123.3	75%	0.752	75%	0.752	S	S	*	*			trans	-68.5	95.7	171.5	-167.4	180	155.5	0	0	107	G4 K6	E2-G4 PolarHBondContact O-N 2.84Å; E2-K6 WeakPolarHBondContact OE1-CE 3.31Å; E2-K6 IonicContact OE1-NZ 2.95Å; E2-K6 PolarHBondContact OE1-NZ 3.11Å
3	Y	78.2	Confident	88.4	Confident	223 Å²	223	120 Å²	120	88%	0.875	73%	0.732	S	S	*	*			trans	-78	102.4	-177.5	-63	-79.6	0	0	0	109	X1	G1-Y3 VanDerWaalsContact O-CE2 3.31Å; G1-Y3 WeakPolarHBondContact O-CE2 3.19Å; G1-Y3 PolarHBondContact O-N 3.37Å; G1-Y3 WeakPolarHBondContact O-CD2 3.28Å
4	G	82.6	Confident	88.9	Confident	59 Å²	59	120.4 Å²	120.4	61%	0.608	73%	0.726	S	S	*	*			trans	161	125.5	170.3	0	0	0	0	0	112.5	E2 K6	E2-G4 PolarHBondContact O-N 2.84Å; G4-K6 PolarHBondContact O-N 3.43Å
5	N	85	Confident	89.3	Confident	162 Å²	162	119.8 Å²	119.8	87%	0.866	72%	0.717	S	S	*	*			trans	-70.6	125.2	167	-67.2	-54.8	0	0	0	108.4	L7	N5-L7 PolarHBondContact O-N 3.42Å
6	K	87.9	Confident	89.7	Confident	157 Å²	157	125.3 Å²	125.3	68%	0.683	72%	0.721	S	S	*	*			trans	-71.6	123	174.9	-68.4	178.5	-178.1	169.7	0	108.8	E2 G4	E2-K6 WeakPolarHBondContact OE1-CE 3.31Å; E2-K6 IonicContact OE1-NZ 2.95Å; E2-K6 PolarHBondContact OE1-NZ 3.11Å; G4-K6 PolarHBondContact O-N 3.43Å
7	L	90.8	Very high	90	Very high	141 Å²	141	125.5 Å²	125.5	74%	0.738	72%	0.724	S	S	*	*			trans	-88.7	111.3	170.7	-58.9	179.8	0	0	0	107.8	N5 F9	N5-L7 PolarHBondContact O-N 3.42Å; L7-F9 HydrophobicContact CB-CE2 4.08Å; L7-F9 HydrophobicContact CB-CZ 4.07Å
8	V	93.7	Very high	90.2	Very high	130 Å²	130	129.3 Å²	129.3	79%	0.788	73%	0.731	S	S	*	*			trans	-104.4	128.2	179.9	-177.8	0	0	0	0	108.8
9	F	94.1	Very high	90.4	Very high	111 Å²	111	132.5 Å²	132.5	49%	0.487	76%	0.762	S	S	.	*			trans	-115	134.4	175.9	-55.7	-72.9	0	0	0	109.9	L7 T13 L15	L7-F9 HydrophobicContact CB-CE2 4.08Å; L7-F9 HydrophobicContact CB-CZ 4.07Å; F9-T13 HydrophobicContact CG-CG2 4.41Å; F9-T13 HydrophobicContact CD1-CG2 3.9Å; F9-T13 HydrophobicContact CB-CG2 4.18Å; F9-L15 HydrophobicContact CE1-CD1 4.09Å; F9-L15 HydrophobicContact CE2-CD2 4.09Å; F9-L15 HydrophobicContact CZ-CD1 3.95Å; F9-L15 HydrophobicContact CZ-CD2 4.05Å
10	G	96	Very high	90.4	Very high	50 Å²	50	132.5 Å²	132.5	52%	0.515	76%	0.762	S	S	.	*			trans	-88.8	172.1	-179.6	0	0	0	0	0	113.1	G12 T13	G10-G12 PolarHBondContact O-N 3.49Å; G10-T13 PolarHBondContact N-OG1 2.95Å; G10-T13 VanDerWaalsContact O-CB 3.28Å; G10-T13 WeakPolarHBondContact O-CB 3.03Å; G10-T13 PolarHBondContact O-N 3.42Å; G10-T13 VanDerWaalsContact O-N 3.11Å; G10-T13 PolarHBondContact O-OG1 3.2Å
11	A	96.9	Very high	90.4	Very high	113 Å²	113	132.5 Å²	132.5	93%	0.934	76%	0.762	S	S	*	*	T	Hydrogen-bonded Turn	trans	-54.1	134.5	175.6	0	0	0	0	0	111.4	T13	A11-T13 VanDerWaalsContact C-N 3.29Å; A11-T13 PolarHBondContact O-N 3.39Å
12	G	97.7	Very high	91.3	Very high	79 Å²	79	134.6 Å²	134.6	81%	0.814	75%	0.751	S	S	*	*	T	Hydrogen-bonded Turn	trans	80.8	-1.9	-178.6	0	0	0	0	0	115.5	G10 I14	G10-G12 PolarHBondContact O-N 3.49Å; G12-I14 PolarHBondContact O-N 2.99Å
13	T	97.3	Very high	92.2	Very high	80 Å²	80	133.1 Å²	133.1	49%	0.491	75%	0.751	S	S	.	*			trans	-73.1	128.7	176.7	-53.1	0	0	0	0	111.1	F9 G10 A11	F9-T13 HydrophobicContact CG-CG2 4.41Å; F9-T13 HydrophobicContact CD1-CG2 3.9Å; F9-T13 HydrophobicContact CB-CG2 4.18Å; G10-T13 PolarHBondContact N-OG1 2.95Å; G10-T13 VanDerWaalsContact O-CB 3.28Å; G10-T13 WeakPolarHBondContact O-CB 3.03Å; G10-T13 PolarHBondContact O-N 3.42Å; G10-T13 VanDerWaalsContact O-N 3.11Å; G10-T13 PolarHBondContact O-OG1 3.2Å; A11-T13 VanDerWaalsContact C-N 3.29Å; A11-T13 PolarHBondContact O-N 3.39Å
14	I	96.1	Very high	93.1	Very high	126 Å²	126	127.4 Å²	127.4	65%	0.646	74%	0.743	S	S	*	*			trans	-107.6	106.4	175	-55.4	174	0	0	0	108.9	G12	G12-I14 PolarHBondContact O-N 2.99Å
15	L	95.1	Very high	93.8	Very high	111 Å²	111	132 Å²	132	58%	0.581	75%	0.752	S	S	*	*			trans	-82	133.7	174.5	-175.8	64.8	0	0	0	110.4	F9	F9-L15 HydrophobicContact CE1-CD1 4.09Å; F9-L15 HydrophobicContact CE2-CD2 4.09Å; F9-L15 HydrophobicContact CZ-CD1 3.95Å; F9-L15 HydrophobicContact CZ-CD2 4.05Å
16	R	95.7	Very high	94.5	Very high	207 Å²	207	129.9 Å²	129.9	78%	0.781	74%	0.744	S	S	*	*			trans	-122.6	123.6	173.4	-63.5	-177.8	178.3	110.8	-2.5	109.1
17	V	94.4	Very high	95	Very high	129 Å²	129	127.8 Å²	127.8	78%	0.782	75%	0.748	S	S	*	*			trans	-104.1	130.1	173.7	-178.1	0	0	0	0	108
18	K	93.9	Very high	95.3	Very high	194 Å²	194	126.7 Å²	126.7	84%	0.843	75%	0.749	S	S	*	*			trans	-101	134.9	166.6	-65.6	-174.5	178.6	-177.8	0	107.4
19	S	92.9	Very high	95.5	Very high	190 Å²	190	126.4 Å²	126.4	100%	1.329	75%	0.746	S	S	*	*			trans	-60.2	0	168	57.6	0	0	0	0	110.6

Retrieved 19 of 19 residues in 7.5 ms (Link to these results)

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