A0A075B6Y8_HUMAN Loading...

T cell receptor alpha joining 11 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Y8, Species HUMAN (Homo sapiens, Human), Gene TRAJ11, Length 20 aa.

						>A0A075B6Y8_HUMAN|A0A075B6Y8|TRAJ11
MNSGYSTLTFGKGTMLLVSP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	59.9	Low	82.7	Confident	243 Å²	243	129.5 Å²	129.5	100%	1.197	74%	0.736	S	S	*	*				0	113.6	0	-67.3	175.1	-171.2	0	107.2	S3	M1-S3 VanDerWaalsContact O-N 3.12Å; M1-S3 PolarHBondContact O-N 3.21Å
2	N	70.1	Confident	83.9	Confident	159 Å²	159	137.5 Å²	137.5	85%	0.85	76%	0.756	S	S	*	*			trans	-76.9	96.8	173.5	-173.5	-89.5	0	0	106.7	G4	N2-G4 PolarHBondContact O-N 3.31Å; N2-G4 PolarHBondContact OD1-N 3.37Å
3	S	74.5	Confident	85	Confident	105 Å²	105	132.8 Å²	132.8	73%	0.734	76%	0.758	S	S	*	*			trans	-76.2	67.2	169.3	-174.6	0	0	0	107.7	M1 Y5	M1-S3 VanDerWaalsContact O-N 3.12Å; M1-S3 PolarHBondContact O-N 3.21Å; S3-Y5 PolarHBondContact O-N 3.38Å
4	G	76.3	Confident	85.9	Confident	43 Å²	43	129.1 Å²	129.1	44%	0.443	74%	0.74	S	S	.	*	P	Polyproline II helix	trans	-65.5	119.3	173.2	0	0	0	0	107.9	N2 S6	N2-G4 PolarHBondContact O-N 3.31Å; N2-G4 PolarHBondContact OD1-N 3.37Å; G4-S6 PolarHBondContact O-N 3.15Å; G4-S6 VanDerWaalsContact O-N 3.08Å
5	Y	82	Confident	86.6	Confident	217 Å²	217	131.8 Å²	131.8	85%	0.851	75%	0.746	S	S	*	*	P	Polyproline II helix	trans	-57.3	117.6	163.9	-64.9	-83	0	0	107.2	S3 T7	S3-Y5 PolarHBondContact O-N 3.38Å; Y5-T7 PolarHBondContact O-N 3.08Å; Y5-T7 VanDerWaalsContact O-N 3.15Å
6	S	83.9	Confident	87.1	Confident	112 Å²	112	130.4 Å²	130.4	78%	0.783	74%	0.735	S	S	*	*	P	Polyproline II helix	trans	-61.5	119.5	173.9	-64.9	0	0	0	108.2	G4 L8	G4-S6 PolarHBondContact O-N 3.15Å; G4-S6 VanDerWaalsContact O-N 3.08Å; S6-L8 PolarHBondContact O-N 3.25Å
7	T	88.8	Confident	87.6	Confident	123 Å²	123	132.3 Å²	132.3	76%	0.755	74%	0.742	S	S	*	*	P	Polyproline II helix	trans	-71.3	125	176.2	-59.5	0	0	0	108.8	Y5	Y5-T7 PolarHBondContact O-N 3.08Å; Y5-T7 VanDerWaalsContact O-N 3.15Å
8	L	91.1	Very high	88	Confident	142 Å²	142	131.2 Å²	131.2	74%	0.743	74%	0.739	S	S	*	*			trans	-90.5	109.7	170.9	-61.3	178.1	0	0	108.2	S6 F10	S6-L8 PolarHBondContact O-N 3.25Å; L8-F10 HydrophobicContact CB-CE2 4.31Å
9	T	93.7	Very high	88.3	Confident	122 Å²	122	130.2 Å²	130.2	75%	0.748	74%	0.741	S	S	*	*			trans	-103.1	127.9	178.9	-57	0	0	0	110
10	F	93.8	Very high	88.5	Confident	110 Å²	110	133.6 Å²	133.6	48%	0.482	77%	0.768	S	S	.	*			trans	-107.3	131.9	171.9	-59	-77.6	0	0	109.9	L8 T14 L16	L8-F10 HydrophobicContact CB-CE2 4.31Å; F10-T14 HydrophobicContact CG-CG2 4.34Å; F10-T14 HydrophobicContact CD1-CG2 3.8Å; F10-T14 HydrophobicContact CB-CG2 4.09Å; F10-L16 HydrophobicContact CE1-CD1 4.22Å; F10-L16 HydrophobicContact CE2-CD2 4.03Å; F10-L16 HydrophobicContact CZ-CD1 3.9Å; F10-L16 HydrophobicContact CZ-CD2 4.16Å; F10-L16 HydrophobicContact CZ-CG 4.5Å
11	G	96.1	Very high	88.5	Confident	49 Å²	49	133.6 Å²	133.6	51%	0.505	77%	0.768	S	S	.	*			trans	-77.9	177	-177.2	0	0	0	0	113.3	G13 T14	G11-G13 PolarHBondContact O-N 2.91Å; G11-T14 WeakPolarHBondContact O-CB 3.47Å; G11-T14 PolarHBondContact O-N 3.12Å; G11-T14 PolarHBondContact O-OG1 3.3Å
12	K	97.1	Very high	90	Very high	225 Å²	225	127.8 Å²	127.8	98%	0.978	75%	0.746	S	S	*	*	T	Hydrogen-bonded Turn	trans	-59.3	128.2	176.3	-174.3	-173.9	179.4	-178.4	110.3	T14	K12-T14 VanDerWaalsContact C-N 3.32Å
13	G	97.6	Very high	91.1	Very high	76 Å²	76	126.1 Å²	126.1	78%	0.784	74%	0.74	S	S	*	*	T	Hydrogen-bonded Turn	trans	84.3	0.3	177.3	0	0	0	0	114.7	G11	G11-G13 PolarHBondContact O-N 2.91Å
14	T	97.3	Very high	92	Very high	82 Å²	82	127.3 Å²	127.3	50%	0.503	74%	0.74	S	S	.	*			trans	-78.1	131.6	173.9	-56.9	0	0	0	111	F10 G11 K12	F10-T14 HydrophobicContact CG-CG2 4.34Å; F10-T14 HydrophobicContact CD1-CG2 3.8Å; F10-T14 HydrophobicContact CB-CG2 4.09Å; G11-T14 WeakPolarHBondContact O-CB 3.47Å; G11-T14 PolarHBondContact O-N 3.12Å; G11-T14 PolarHBondContact O-OG1 3.3Å; K12-T14 VanDerWaalsContact C-N 3.32Å
15	M	96.1	Very high	93	Very high	169 Å²	169	132.6 Å²	132.6	83%	0.833	76%	0.759	S	S	*	*			trans	-106.4	123.6	173	-64.8	-178.6	177.7	0	109.6
16	L	94.9	Very high	93.8	Very high	110 Å²	110	126.9 Å²	126.9	58%	0.576	75%	0.752	S	S	*	*			trans	-92.7	119.6	172.8	-179.8	64.9	0	0	109	F10 V18	F10-L16 HydrophobicContact CE1-CD1 4.22Å; F10-L16 HydrophobicContact CE2-CD2 4.03Å; F10-L16 HydrophobicContact CZ-CD1 3.9Å; F10-L16 HydrophobicContact CZ-CD2 4.16Å; F10-L16 HydrophobicContact CZ-CG 4.5Å; L16-V18 HydrophobicContact CD2-CG2 4.2Å; L16-V18 HydrophobicContact CG-CG2 4.05Å
17	L	96.1	Very high	94.5	Very high	162 Å²	162	128 Å²	128	85%	0.848	75%	0.75	S	S	*	*			trans	-103.7	124.9	173.3	-59.4	176	0	0	108.3
18	V	94.4	Very high	94.9	Very high	113 Å²	113	128.4 Å²	128.4	69%	0.685	75%	0.75	S	S	*	*			trans	-116.8	120.8	176.5	-177.4	0	0	0	108.2	L16	L16-V18 HydrophobicContact CD2-CG2 4.2Å; L16-V18 HydrophobicContact CG-CG2 4.05Å
19	S	93.3	Very high	95.2	Very high	112 Å²	112	127.3 Å²	127.3	78%	0.783	75%	0.75	S	S	*	*			trans	-84	129.7	160.3	-62	0	0	0	107.8
20	P	92.3	Very high	95.4	Very high	197 Å²	197	127.7 Å²	127.7	100%	1.279	75%	0.751	S	S	*	*			trans	-54	0	171.4	-24.5	34.5	0	0	113.2

Retrieved 20 of 20 residues in 14 ms (Link to these results)

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