A0A075B6Y8_HUMAN Loading...

T cell receptor alpha joining 11 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Y8, Species HUMAN (Homo sapiens, Human), Gene TRAJ11, Length 20 aa.

						>A0A075B6Y8_HUMAN|A0A075B6Y8|TRAJ11
XNSGYSTLTFGKGTMLLVSP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	65.4	Low	82.9	Confident	129 Å²	129	121.3 Å²	121.3	100%	1.33	76%	0.762	S	S	*	*				0	129.3	0	0	0	0	0	108	S3	G1-S3 PolarHBondContact O-N 3.2Å
2	N	71.4	Confident	84.1	Confident	162 Å²	162	129.9 Å²	129.9	87%	0.866	78%	0.78	S	S	*	*			trans	-77.7	90.6	176.6	-168.9	-11.6	0	0	107.8	G4	N2-G4 PolarHBondContact O-N 3.17Å; N2-G4 PolarHBondContact OD1-N 3.02Å
3	S	73.1	Confident	85.1	Confident	113 Å²	113	125.7 Å²	125.7	79%	0.79	78%	0.779	S	S	*	*			trans	-78.8	72.1	168.9	-132.8	0	0	0	107	X1 Y5	G1-S3 PolarHBondContact O-N 3.2Å; S3-Y5 PolarHBondContact O-N 3.06Å
4	G	75.5	Confident	86	Confident	49 Å²	49	122.4 Å²	122.4	51%	0.505	76%	0.759	S	S	.	*			trans	-71	110.4	171.6	0	0	0	0	106.9	N2 S6	N2-G4 PolarHBondContact O-N 3.17Å; N2-G4 PolarHBondContact OD1-N 3.02Å; G4-S6 PolarHBondContact O-N 3.4Å
5	Y	81.1	Confident	86.7	Confident	224 Å²	224	125.3 Å²	125.3	88%	0.878	76%	0.763	S	S	*	*			trans	-53.3	115.7	161.6	-65.2	-83.1	0	0	106.9	S3 T7	S3-Y5 PolarHBondContact O-N 3.06Å; Y5-T7 PolarHBondContact O-N 2.99Å
6	S	82.1	Confident	87.2	Confident	108 Å²	108	124.9 Å²	124.9	76%	0.755	75%	0.754	S	S	*	*			trans	-64.2	118.9	175.7	-64	0	0	0	108.3	G4 L8	G4-S6 PolarHBondContact O-N 3.4Å; S6-L8 PolarHBondContact O-N 3.29Å
7	T	88.6	Confident	87.7	Confident	123 Å²	123	126.9 Å²	126.9	76%	0.755	76%	0.759	S	S	*	*			trans	-63.6	124.3	175.9	-55.4	0	0	0	109.5	Y5	Y5-T7 PolarHBondContact O-N 2.99Å
8	L	91.3	Very high	88.1	Confident	140 Å²	140	126.3 Å²	126.3	73%	0.733	76%	0.755	S	S	*	*			trans	-90.6	111.6	169.9	-60	177.7	0	0	108.3	S6 F10	S6-L8 PolarHBondContact O-N 3.29Å; L8-F10 HydrophobicContact CB-CE2 4.12Å; L8-F10 HydrophobicContact CB-CZ 4.37Å
9	T	93.7	Very high	88.3	Confident	124 Å²	124	125.4 Å²	125.4	76%	0.761	76%	0.755	S	S	*	*			trans	-103.1	126.5	177.9	-56.9	0	0	0	109.8
10	F	93.5	Very high	88.6	Confident	112 Å²	112	129 Å²	129	49%	0.491	78%	0.782	S	S	.	*			trans	-108.9	132.5	172.8	-59.3	-78	0	0	110	L8 T14 L16	L8-F10 HydrophobicContact CB-CE2 4.12Å; L8-F10 HydrophobicContact CB-CZ 4.37Å; F10-T14 HydrophobicContact CG-CG2 4.3Å; F10-T14 HydrophobicContact CD1-CG2 3.74Å; F10-T14 HydrophobicContact CB-CG2 4.07Å; F10-L16 HydrophobicContact CE1-CD1 4.44Å; F10-L16 HydrophobicContact CE2-CD2 4.35Å; F10-L16 HydrophobicContact CZ-CD1 4.15Å; F10-L16 HydrophobicContact CZ-CD2 4.38Å
11	G	96.2	Very high	88.6	Confident	50 Å²	50	129 Å²	129	52%	0.515	78%	0.782	S	S	.	*			trans	-80.3	177.5	-176.5	0	0	0	0	113.3	G13 T14	G11-G13 PolarHBondContact O-N 3.32Å; G11-T14 WeakPolarHBondContact O-CB 3.45Å; G11-T14 PolarHBondContact O-N 3.19Å; G11-T14 PolarHBondContact O-OG1 3.31Å
12	K	97.2	Very high	89.8	Confident	225 Å²	225	129 Å²	129	98%	0.978	75%	0.753	S	S	*	*	T	Hydrogen-bonded Turn	trans	-59.7	128.7	176.1	-177.9	176.8	179.5	170.9	110.3	T14	K12-T14 VanDerWaalsContact C-N 3.32Å
13	G	97.6	Very high	90.8	Very high	75 Å²	75	127.2 Å²	127.2	77%	0.773	75%	0.747	S	S	*	*	T	Hydrogen-bonded Turn	trans	84	-0.4	178.3	0	0	0	0	114.7	G11	G11-G13 PolarHBondContact O-N 3.32Å
14	T	97.4	Very high	91.8	Very high	80 Å²	80	128 Å²	128	49%	0.491	74%	0.744	S	S	.	*			trans	-76.8	130.7	174.1	-56.1	0	0	0	110.9	F10 G11 K12	F10-T14 HydrophobicContact CG-CG2 4.3Å; F10-T14 HydrophobicContact CD1-CG2 3.74Å; F10-T14 HydrophobicContact CB-CG2 4.07Å; G11-T14 WeakPolarHBondContact O-CB 3.45Å; G11-T14 PolarHBondContact O-N 3.19Å; G11-T14 PolarHBondContact O-OG1 3.31Å; K12-T14 VanDerWaalsContact C-N 3.32Å
15	M	96.2	Very high	92.9	Very high	166 Å²	166	132.9 Å²	132.9	82%	0.818	76%	0.759	S	S	*	*			trans	-109	123.9	173.8	-64.4	-177.9	173.5	0	109.3
16	L	94.7	Very high	93.6	Very high	118 Å²	118	126.9 Å²	126.9	62%	0.618	75%	0.751	S	S	*	*			trans	-93.3	120.3	171.9	-179.3	66.5	0	0	108.8	F10 V18	F10-L16 HydrophobicContact CE1-CD1 4.44Å; F10-L16 HydrophobicContact CE2-CD2 4.35Å; F10-L16 HydrophobicContact CZ-CD1 4.15Å; F10-L16 HydrophobicContact CZ-CD2 4.38Å; L16-V18 HydrophobicContact CD2-CG2 4.23Å; L16-V18 HydrophobicContact CG-CG2 4.1Å
17	L	96.2	Very high	94.5	Very high	160 Å²	160	128.2 Å²	128.2	84%	0.838	75%	0.751	S	S	*	*			trans	-105.6	126.4	172.9	-61.7	119.1	0	0	108.2
18	V	94.2	Very high	94.9	Very high	116 Å²	116	128.6 Å²	128.6	70%	0.703	75%	0.751	S	S	*	*			trans	-117.8	120.2	175.4	-178.1	0	0	0	107.8	L16	L16-V18 HydrophobicContact CD2-CG2 4.23Å; L16-V18 HydrophobicContact CG-CG2 4.1Å
19	S	93.3	Very high	95.2	Very high	108 Å²	108	127.7 Å²	127.7	76%	0.755	75%	0.752	S	S	*	*			trans	-81.9	135	160.7	-62.9	0	0	0	108.1
20	P	92.6	Very high	95.4	Very high	198 Å²	198	128 Å²	128	100%	1.286	75%	0.751	S	S	*	*			trans	-52.7	0	169.6	-23.9	33.8	0	0	112.9

Retrieved 20 of 20 residues in 15.3 ms (Link to these results)

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