A0A075B6Z5_HUMAN Loading...

T cell receptor alpha joining 4 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Z5, Species HUMAN (Homo sapiens, Human), Gene TRAJ4, Length 21 aa.

						>A0A075B6Z5_HUMAN|A0A075B6Z5|TRAJ4
XFSGGYNKLIFGAGTRLAVHP
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	60.9	Low	77.8	Confident	114 Å²	114	131.4 Å²	131.4	100%	1.175	75%	0.749	S	S	*	*				0	129	0	0	0	0	0	0	108.8
2	F	63.2	Low	79.3	Confident	194 Å²	194	124.6 Å²	124.6	85%	0.851	73%	0.729	S	S	*	*			trans	-149.9	96.4	164.9	-67.4	-76.9	0	0	0	105.2	G4	F2-G4 PolarHBondContact O-N 2.76Å
3	S	67.3	Low	80.6	Confident	105 Å²	105	123.6 Å²	123.6	73%	0.734	75%	0.745	S	S	*	*			trans	-68	125.8	178.8	-179.6	0	0	0	0	108.3	G5	S3-G5 PolarHBondContact O-N 3.44Å
4	G	68	Low	81.9	Confident	77 Å²	77	121 Å²	121	79%	0.794	76%	0.755	S	S	*	*	T	Hydrogen-bonded Turn	trans	-68.3	40.7	-170.6	0	0	0	0	0	116.2	F2	F2-G4 PolarHBondContact O-N 2.76Å
5	G	72.8	Confident	82.9	Confident	35 Å²	35	118.4 Å²	118.4	36%	0.361	74%	0.739	S	S	.	*	T	Hydrogen-bonded Turn	trans	-89.8	-15	-177.9	0	0	0	0	0	115.4	S3 N7	S3-G5 PolarHBondContact O-N 3.44Å; G5-N7 VanDerWaalsContact C-N 3.28Å; G5-N7 PolarHBondContact O-N 3.27Å
6	Y	76.9	Confident	83.7	Confident	199 Å²	199	125.9 Å²	125.9	78%	0.78	75%	0.749	S	S	*	*	T	Hydrogen-bonded Turn	trans	-71.2	-17.3	-170.9	-60.3	-77.2	0	0	0	114.7
7	N	82.7	Confident	84.4	Confident	154 Å²	154	124.9 Å²	124.9	82%	0.824	74%	0.738	S	S	*	*	T	Hydrogen-bonded Turn	trans	-109.1	24.8	-172.5	-60.9	-25.3	0	0	0	113.4	G5	G5-N7 VanDerWaalsContact C-N 3.28Å; G5-N7 PolarHBondContact O-N 3.27Å
8	K	86.5	Confident	85.1	Confident	157 Å²	157	121.8 Å²	121.8	68%	0.683	73%	0.729	S	S	*	*			trans	-79.9	126.2	178.7	-69	-178.8	-179.7	-179.1	0	110.3
9	L	90.7	Very high	85.6	Confident	147 Å²	147	121.7 Å²	121.7	77%	0.77	73%	0.729	S	S	*	*			trans	-83.7	121.3	167.6	-56.8	178.8	0	0	0	108.1	F11	L9-F11 HydrophobicContact CB-CE2 4.1Å; L9-F11 HydrophobicContact CB-CZ 4.02Å
10	I	92.2	Very high	86	Confident	153 Å²	153	123.9 Å²	123.9	79%	0.785	73%	0.731	S	S	*	*			trans	-110.9	128.1	179.9	-57.3	173.4	0	0	0	107.8
11	F	94.2	Very high	86.4	Confident	110 Å²	110	127.3 Å²	127.3	48%	0.482	76%	0.756	S	S	.	*			trans	-113.8	138.5	176.2	-55.8	-72	0	0	0	110	L9 T15 L17	L9-F11 HydrophobicContact CB-CE2 4.1Å; L9-F11 HydrophobicContact CB-CZ 4.02Å; F11-T15 HydrophobicContact CB-CG2 4.17Å; F11-T15 HydrophobicContact CD1-CG2 3.9Å; F11-T15 HydrophobicContact CG-CG2 4.41Å; F11-L17 HydrophobicContact CE1-CD1 4.2Å; F11-L17 HydrophobicContact CZ-CD2 4.13Å; F11-L17 HydrophobicContact CZ-CD1 3.9Å; F11-L17 HydrophobicContact CE2-CD2 3.99Å
12	G	96	Very high	87.7	Confident	50 Å²	50	128 Å²	128	52%	0.515	74%	0.735	S	S	.	*			trans	-92.3	177.1	-177.3	0	0	0	0	0	113.2	G14 T15	G12-G14 PolarHBondContact O-N 3.42Å; G12-T15 WeakPolarHBondContact O-CB 3.44Å; G12-T15 PolarHBondContact O-N 3.39Å; G12-T15 PolarHBondContact O-OG1 3.2Å
13	A	96.8	Very high	89	Confident	112 Å²	112	124.5 Å²	124.5	93%	0.926	73%	0.729	S	S	*	*	T	Hydrogen-bonded Turn	trans	-58.9	134	173.9	0	0	0	0	0	110.8	T15	A13-T15 VanDerWaalsContact C-N 3.28Å; A13-T15 PolarHBondContact O-N 3.41Å
14	G	97.8	Very high	90.2	Very high	87 Å²	87	125.6 Å²	125.6	90%	0.897	73%	0.729	S	S	*	*	T	Hydrogen-bonded Turn	trans	81.1	-5.4	-178.8	0	0	0	0	0	115.3	G12	G12-G14 PolarHBondContact O-N 3.42Å
15	T	97.5	Very high	91.5	Very high	82 Å²	82	128.4 Å²	128.4	50%	0.503	73%	0.725	S	S	.	*			trans	-75.7	126.9	174.5	-57.8	0	0	0	0	111.2	F11 G12 A13	F11-T15 HydrophobicContact CB-CG2 4.17Å; F11-T15 HydrophobicContact CD1-CG2 3.9Å; F11-T15 HydrophobicContact CG-CG2 4.41Å; G12-T15 WeakPolarHBondContact O-CB 3.44Å; G12-T15 PolarHBondContact O-N 3.39Å; G12-T15 PolarHBondContact O-OG1 3.2Å; A13-T15 VanDerWaalsContact C-N 3.28Å; A13-T15 PolarHBondContact O-N 3.41Å
16	R	96.5	Very high	92.6	Very high	238 Å²	238	134.3 Å²	134.3	90%	0.898	75%	0.748	S	S	*	*			trans	-104.7	112.4	172.9	-173.9	175.4	-179.6	170.8	-0.3	110
17	L	95.6	Very high	93.7	Very high	109 Å²	109	129.9 Å²	129.9	57%	0.571	75%	0.746	S	S	*	*			trans	-81.5	132.2	172.1	-177.6	64.1	0	0	0	109.8	F11	F11-L17 HydrophobicContact CE1-CD1 4.2Å; F11-L17 HydrophobicContact CZ-CD2 4.13Å; F11-L17 HydrophobicContact CZ-CD1 3.9Å; F11-L17 HydrophobicContact CE2-CD2 3.99Å
18	A	96.2	Very high	94.5	Very high	70 Å²	70	128.2 Å²	128.2	58%	0.579	74%	0.74	S	S	*	*			trans	-118.4	134.5	170.7	0	0	0	0	0	109.1
19	V	95.1	Very high	95.1	Very high	120 Å²	120	126 Å²	126	73%	0.727	75%	0.745	S	S	*	*			trans	-114.9	123.1	175.4	179.8	0	0	0	0	107.4
20	H	94	Very high	95.5	Very high	165 Å²	165	124.3 Å²	124.3	76%	0.764	74%	0.743	S	S	*	*			trans	-93.4	126.9	167.3	-62	-75.7	0	0	0	107.1
21	P	93.6	Very high	95.8	Very high	195 Å²	195	121.6 Å²	121.6	100%	1.266	74%	0.739	S	S	*	*			trans	-54.9	0	172.7	-24.6	34.8	0	0	0	112.9

Retrieved 21 of 21 residues in 5.9 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).