A0A075B6Z8_HUMAN Loading...

T cell receptor alpha joining 25 (non-functional) AlphaSync

AlphaFold DB , UniProt , Accession A0A075B6Z8, Species HUMAN (Homo sapiens, Human), Gene TRAJ25, Length 20 aa.

						>A0A075B6Z8_HUMAN|A0A075B6Z8|TRAJ25
XEGQGFSFIFGKGTRLLVKP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	72.7	Confident	85.3	Confident	130 Å²	130	129.2 Å²	129.2	100%	1.34	78%	0.782	S	S	*	*				0	132.5	0	0	0	0	0	107.4	G3	G1-G3 PolarHBondContact O-N 3.14Å
2	E	75.6	Confident	86.2	Confident	192 Å²	192	136.8 Å²	136.8	90%	0.897	80%	0.797	S	S	*	*			trans	-61.3	123.2	178.6	-152.7	168.1	-178.3	0	109.1	Q4	E2-Q4 PolarHBondContact O-N 3.26Å
3	G	77.4	Confident	87.1	Confident	74 Å²	74	132 Å²	132	76%	0.763	80%	0.795	S	S	*	*			trans	-71.7	100.4	-177	0	0	0	0	109.6	X1 G5	G1-G3 PolarHBondContact O-N 3.14Å; G3-G5 VanDerWaalsContact C-N 3.34Å; G3-G5 PolarHBondContact O-N 3.47Å
4	Q	79.8	Confident	87.8	Confident	185 Å²	185	128.5 Å²	128.5	86%	0.864	77%	0.774	S	S	*	*			trans	-69.5	96.1	171.7	-68.2	-175	86.7	0	108.2	E2	E2-Q4 PolarHBondContact O-N 3.26Å
5	G	85.7	Confident	88.3	Confident	65 Å²	65	134.7 Å²	134.7	67%	0.67	78%	0.778	S	S	*	*	P	Polyproline II helix	trans	-62.8	141.2	171.9	0	0	0	0	110.4	G3 S7	G3-G5 VanDerWaalsContact C-N 3.34Å; G3-G5 PolarHBondContact O-N 3.47Å; G5-S7 PolarHBondContact O-N 3.49Å
6	F	85.6	Confident	88.7	Confident	190 Å²	190	133.7 Å²	133.7	83%	0.833	77%	0.768	S	S	*	*	P	Polyproline II helix	trans	-72.4	128.9	173.3	-63.1	-75.3	0	0	109.9
7	S	88.3	Confident	89.1	Confident	105 Å²	105	135.1 Å²	135.1	73%	0.734	77%	0.772	S	S	*	*	P	Polyproline II helix	trans	-93.3	122.9	173.8	-66.8	0	0	0	110	G5	G5-S7 PolarHBondContact O-N 3.49Å
8	F	91	Very high	89.3	Confident	172 Å²	172	134.2 Å²	134.2	75%	0.754	77%	0.769	S	S	*	*			trans	-91.3	103.8	170	-62.9	-72.7	0	0	109.1	F10	F8-F10 HydrophobicContact CB-CE2 3.86Å; F8-F10 HydrophobicContact CB-CZ 4.07Å
9	I	93	Very high	89.5	Confident	154 Å²	154	137.1 Å²	137.1	79%	0.79	77%	0.772	S	S	*	*			trans	-97.6	121.1	178.5	-55.5	176.6	0	0	108.9
10	F	93.1	Very high	89.6	Confident	106 Å²	106	140.2 Å²	140.2	47%	0.465	80%	0.798	S	S	.	*			trans	-108.1	119.4	172.6	-57.8	-75.1	0	0	109.3	F8 T14 L16	F8-F10 HydrophobicContact CB-CE2 3.86Å; F8-F10 HydrophobicContact CB-CZ 4.07Å; F10-T14 HydrophobicContact CB-CG2 4.02Å; F10-T14 HydrophobicContact CD1-CG2 3.69Å; F10-T14 HydrophobicContact CG-CG2 4.26Å; F10-L16 HydrophobicContact CE2-CD2 4.25Å; F10-L16 HydrophobicContact CZ-CG 4.45Å; F10-L16 HydrophobicContact CZ-CD2 4.16Å; F10-L16 HydrophobicContact CZ-CD1 4.01Å; F10-L16 HydrophobicContact CZ-CB 4.46Å; F10-L16 HydrophobicContact CE1-CD1 4.32Å
11	G	95.7	Very high	89.6	Confident	48 Å²	48	140.2 Å²	140.2	50%	0.495	80%	0.798	S	S	.	*			trans	-71.4	177.1	179.6	0	0	0	0	113.6	G13 T14	G11-G13 PolarHBondContact O-N 3.04Å; G11-T14 WeakPolarHBondContact O-CB 3.44Å; G11-T14 PolarHBondContact O-N 3.34Å; G11-T14 VanDerWaalsContact O-N 3.14Å; G11-T14 PolarHBondContact O-OG1 2.92Å
12	K	97	Very high	90.5	Very high	221 Å²	221	140.7 Å²	140.7	96%	0.961	77%	0.769	S	S	*	*	T	Hydrogen-bonded Turn	trans	-57.3	126	179.5	-174.5	179.5	179.9	-179.6	110.7
13	G	97.3	Very high	91.3	Very high	74 Å²	74	137.8 Å²	137.8	76%	0.763	76%	0.762	S	S	*	*	T	Hydrogen-bonded Turn	trans	89.7	-7.4	178	0	0	0	0	115	G11	G11-G13 PolarHBondContact O-N 3.04Å
14	T	97.1	Very high	92.1	Very high	83 Å²	83	141.6 Å²	141.6	51%	0.509	76%	0.762	S	S	.	*			trans	-78.2	138	177.9	-59.1	0	0	0	111.5	F10 G11	F10-T14 HydrophobicContact CB-CG2 4.02Å; F10-T14 HydrophobicContact CD1-CG2 3.69Å; F10-T14 HydrophobicContact CG-CG2 4.26Å; G11-T14 WeakPolarHBondContact O-CB 3.44Å; G11-T14 PolarHBondContact O-N 3.34Å; G11-T14 VanDerWaalsContact O-N 3.14Å; G11-T14 PolarHBondContact O-OG1 2.92Å
15	R	95.3	Very high	92.9	Very high	222 Å²	222	138.9 Å²	138.9	84%	0.838	76%	0.755	S	S	*	*			trans	-121.2	126.8	176.4	-59.7	-177.4	-176.2	-165	109.6
16	L	94.2	Very high	93.4	Very high	118 Å²	118	143.8 Å²	143.8	62%	0.618	76%	0.761	S	S	*	*			trans	-87.4	125	170.6	-177.4	65.1	0	0	109	F10 V18	F10-L16 HydrophobicContact CE2-CD2 4.25Å; F10-L16 HydrophobicContact CZ-CG 4.45Å; F10-L16 HydrophobicContact CZ-CD2 4.16Å; F10-L16 HydrophobicContact CZ-CD1 4.01Å; F10-L16 HydrophobicContact CZ-CB 4.46Å; F10-L16 HydrophobicContact CE1-CD1 4.32Å; L16-V18 HydrophobicContact CD2-CG2 4.26Å; L16-V18 HydrophobicContact CG-CG2 4.21Å
17	L	95.6	Very high	93.9	Very high	158 Å²	158	140.5 Å²	140.5	83%	0.827	76%	0.756	S	S	*	*			trans	-108.9	117.1	174	-62.9	172.2	0	0	108.2
18	V	93.8	Very high	94.4	Very high	118 Å²	118	143.2 Å²	143.2	72%	0.715	76%	0.758	S	S	*	*			trans	-102.3	124.1	173.9	-177.2	0	0	0	107.9	L16	L16-V18 HydrophobicContact CD2-CG2 4.26Å; L16-V18 HydrophobicContact CG-CG2 4.21Å
19	K	92.6	Very high	94.7	Very high	189 Å²	189	140.8 Å²	140.8	82%	0.822	76%	0.758	S	S	*	*			trans	-84.9	137.5	164.1	-66.5	-178.3	-178.3	177.2	107.6
20	P	91.4	Very high	94.8	Very high	199 Å²	199	139.6 Å²	139.6	100%	1.292	76%	0.755	S	S	*	*			trans	-51.6	0	169.3	-23.3	33.3	0	0	112.2

Retrieved 20 of 20 residues in 16.6 ms (Link to these results)

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