A0A075B708_HUMAN Loading...

T cell receptor alpha joining 61 (non-functional) AlphaSync

AlphaFold DB , UniProt , Accession A0A075B708, Species HUMAN (Homo sapiens, Human), Gene TRAJ61, Length 20 aa.

						>A0A075B708_HUMAN|A0A075B708|TRAJ61
XYRVNRKLTFGANTRGIMKL
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	50.3	Low	69.6	Low	110 Å²	110	141.7 Å²	141.7	100%	1.134	71%	0.714	S	S	*	*				0	114.9	0	0	0	0	0	0	110.6	R3	G1-R3 PolarHBondContact O-N 2.84Å
2	Y	66.9	Low	70.4	Confident	231 Å²	231	135.3 Å²	135.3	91%	0.906	70%	0.699	S	S	*	*	T	Hydrogen-bonded Turn	trans	-64.6	14.7	-169.6	-60.8	-91.8	0	0	0	116.9
3	R	67.2	Low	70.8	Confident	233 Å²	233	132.2 Å²	132.2	88%	0.879	68%	0.684	S	S	*	*	H	α-helix	trans	-79.4	-28.7	-177.8	-88.2	-178.5	136.9	-148	-2.6	114.3	X1 N5	G1-R3 PolarHBondContact O-N 2.84Å; R3-N5 VanDerWaalsContact C-N 3.34Å; R3-N5 PolarHBondContact O-N 2.95Å
4	V	66	Low	71.2	Confident	111 Å²	111	127.9 Å²	127.9	67%	0.673	67%	0.667	S	S	*	*	H	α-helix	trans	-67.7	-36.4	-175.5	-177.1	0	0	0	0	111.5
5	N	72.3	Confident	71.7	Confident	112 Å²	112	133.6 Å²	133.6	60%	0.599	68%	0.676	S	S	*	*	H	α-helix	trans	-72.4	-36	-174.3	-139.5	-9.7	0	0	0	112.4	R3 K7 L8 T9	R3-N5 VanDerWaalsContact C-N 3.34Å; R3-N5 PolarHBondContact O-N 2.95Å; N5-K7 VanDerWaalsContact C-N 3.32Å; N5-K7 PolarHBondContact O-N 2.94Å; N5-L8 PolarHBondContact O-N 3.17Å; N5-L8 VanDerWaalsContact O-N 3.17Å; N5-T9 PolarHBondContact O-N 3.46Å; N5-T9 PolarHBondContact O-OG1 3.09Å
6	R	70.8	Confident	71.7	Confident	207 Å²	207	128.4 Å²	128.4	78%	0.781	67%	0.666	S	S	*	*	H	α-helix	trans	-64.4	-32.9	-177.8	-168.5	174.2	-83	-129.7	0.1	113.1	F10	R6-F10 WeakPolarHBondContact O-CB 3.42Å; R6-F10 PolarHBondContact O-N 3.01Å
7	K	75.5	Confident	71.7	Confident	179 Å²	179	128.1 Å²	128.1	78%	0.778	66%	0.664	S	S	*	*	H	α-helix	trans	-69.4	-40	175.5	-170.6	176.8	-178.4	-175.7	0	111.8	N5 G11	N5-K7 VanDerWaalsContact C-N 3.32Å; N5-K7 PolarHBondContact O-N 2.94Å; K7-G11 PolarHBondContact O-N 3.06Å
8	L	73.2	Confident	71.9	Confident	116 Å²	116	129.9 Å²	129.9	61%	0.607	67%	0.672	S	S	*	*	H	α-helix	trans	-67.2	-42.3	176.5	-64.7	172.8	0	0	0	111.2	N5 A12	N5-L8 PolarHBondContact O-N 3.17Å; N5-L8 VanDerWaalsContact O-N 3.17Å; L8-A12 PolarHBondContact O-N 3.3Å; L8-A12 VanDerWaalsContact O-N 3.11Å; L8-A12 WeakPolarHBondContact O-CB 3.49Å
9	T	71.8	Confident	71.6	Confident	71 Å²	71	133.2 Å²	133.2	44%	0.436	68%	0.68	S	S	.	*	H	α-helix	trans	-63.4	-44.1	175.9	-49.8	0	0	0	0	112.4	N5 A12 N13	N5-T9 PolarHBondContact O-N 3.46Å; N5-T9 PolarHBondContact O-OG1 3.09Å; T9-A12 PolarHBondContact O-N 3.11Å; T9-N13 PolarHBondContact O-N 3.1Å; T9-N13 VanDerWaalsContact O-N 3.1Å; T9-N13 PolarHBondContact O-ND2 3.11Å; T9-N13 VanDerWaalsContact O-ND2 3.09Å
10	F	74.7	Confident	71.1	Confident	150 Å²	150	137.2 Å²	137.2	66%	0.658	70%	0.702	S	S	*	*	H	α-helix	trans	-62.8	-45	179.1	-169.1	-99.5	0	0	0	111.8	R6 A12 N13 T14	R6-F10 WeakPolarHBondContact O-CB 3.42Å; R6-F10 PolarHBondContact O-N 3.01Å; F10-A12 PolarHBondContact O-N 3.46Å; F10-N13 PolarHBondContact O-N 3.44Å; F10-T14 VanDerWaalsContact O-OG1 3.11Å; F10-T14 VanDerWaalsContact O-N 3.11Å; F10-T14 PolarHBondContact O-N 3.18Å; F10-T14 PolarHBondContact O-OG1 3.11Å
11	G	76.4	Confident	71.1	Confident	39 Å²	39	137.2 Å²	137.2	40%	0.402	70%	0.702	S	S	.	*	H	α-helix	trans	-63.3	-37.8	177.5	0	0	0	0	0	113.9	K7 R15	K7-G11 PolarHBondContact O-N 3.06Å; G11-R15 VanDerWaalsContact O-CB 3.32Å; G11-R15 WeakPolarHBondContact O-CB 3.31Å; G11-R15 PolarHBondContact O-N 3.5Å; G11-R15 VanDerWaalsContact O-N 3.11Å
12	A	79.5	Confident	72.2	Confident	65 Å²	65	138.6 Å²	138.6	54%	0.537	68%	0.679	S	S	.	*	H	α-helix	trans	-68.5	-43.8	178.3	0	0	0	0	0	112.5	L8 T9 F10 R15 G16	L8-A12 PolarHBondContact O-N 3.3Å; L8-A12 VanDerWaalsContact O-N 3.11Å; L8-A12 WeakPolarHBondContact O-CB 3.49Å; T9-A12 PolarHBondContact O-N 3.11Å; F10-A12 PolarHBondContact O-N 3.46Å; A12-R15 PolarHBondContact O-N 3.48Å; A12-G16 PolarHBondContact O-N 3.46Å
13	N	76.1	Confident	72.5	Confident	95 Å²	95	133.5 Å²	133.5	51%	0.508	67%	0.667	S	S	.	*	H	α-helix	trans	-65.4	-42.2	178.7	-69.4	-35.2	0	0	0	111.6	T9 F10 I17	T9-N13 PolarHBondContact O-N 3.1Å; T9-N13 VanDerWaalsContact O-N 3.1Å; T9-N13 PolarHBondContact O-ND2 3.11Å; T9-N13 VanDerWaalsContact O-ND2 3.09Å; F10-N13 PolarHBondContact O-N 3.44Å; N13-I17 PolarHBondContact O-N 3.39Å; N13-I17 WeakPolarHBondContact O-CG1 3.36Å; N13-I17 WeakPolarHBondContact O-CD1 3.19Å; N13-I17 WeakPolarHBondContact O-CB 3.45Å
14	T	76.4	Confident	72.8	Confident	72 Å²	72	127.6 Å²	127.6	44%	0.442	65%	0.654	S	S	.	*	H	α-helix	trans	-66.4	-42.1	177.3	-56.8	0	0	0	0	112.2	F10 G16 I17 M18	F10-T14 VanDerWaalsContact O-OG1 3.11Å; F10-T14 VanDerWaalsContact O-N 3.11Å; F10-T14 PolarHBondContact O-N 3.18Å; F10-T14 PolarHBondContact O-OG1 3.11Å; T14-G16 VanDerWaalsContact C-N 3.33Å; T14-G16 PolarHBondContact O-N 3.05Å; T14-I17 PolarHBondContact O-N 3.11Å; T14-M18 VanDerWaalsContact O-CB 3.31Å; T14-M18 WeakPolarHBondContact O-CB 3.32Å; T14-M18 PolarHBondContact O-N 3.33Å
15	R	77.8	Confident	73.3	Confident	213 Å²	213	128.7 Å²	128.7	80%	0.804	65%	0.653	S	S	*	*	H	α-helix	trans	-70.3	-29.9	-178.3	-161.3	-178.7	-78.1	-169.6	-4	112.4	G11 A12	G11-R15 VanDerWaalsContact O-CB 3.32Å; G11-R15 WeakPolarHBondContact O-CB 3.31Å; G11-R15 PolarHBondContact O-N 3.5Å; G11-R15 VanDerWaalsContact O-N 3.11Å; A12-R15 PolarHBondContact O-N 3.48Å
16	G	71.7	Confident	73.3	Confident	50 Å²	50	129.8 Å²	129.8	52%	0.515	66%	0.657	S	S	.	*	H	α-helix	trans	-76.2	-40.1	174.6	0	0	0	0	0	113.8	A12 T14 K19	A12-G16 PolarHBondContact O-N 3.46Å; T14-G16 VanDerWaalsContact C-N 3.33Å; T14-G16 PolarHBondContact O-N 3.05Å; G16-K19 PolarHBondContact O-N 3.45Å
17	I	71.8	Confident	73.5	Confident	123 Å²	123	124.3 Å²	124.3	63%	0.631	65%	0.648	S	S	*	*	H	α-helix	trans	-72.2	-35.3	179.3	-65.6	165.5	0	0	0	111.6	N13 T14 K19 L20	N13-I17 PolarHBondContact O-N 3.39Å; N13-I17 WeakPolarHBondContact O-CG1 3.36Å; N13-I17 WeakPolarHBondContact O-CD1 3.19Å; N13-I17 WeakPolarHBondContact O-CB 3.45Å; T14-I17 PolarHBondContact O-N 3.11Å; I17-K19 PolarHBondContact O-N 3.13Å; I17-K19 VanDerWaalsContact O-N 3.13Å; I17-L20 PolarHBondContact O-N 3.06Å
18	M	75.1	Confident	73.4	Confident	162 Å²	162	120.1 Å²	120.1	80%	0.798	64%	0.638	S	S	*	*	T	Hydrogen-bonded Turn	trans	-67.6	-8.9	178.7	-170.7	176.1	-179.7	0	0	113.9	T14	T14-M18 VanDerWaalsContact O-CB 3.31Å; T14-M18 WeakPolarHBondContact O-CB 3.32Å; T14-M18 PolarHBondContact O-N 3.33Å
19	K	67.2	Low	73.4	Confident	191 Å²	191	120.4 Å²	120.4	83%	0.83	64%	0.64	S	S	*	*	T	Hydrogen-bonded Turn	trans	-94	5.4	-180	-154.2	174.3	-179.9	-178.8	0	113.5	G16 I17	G16-K19 PolarHBondContact O-N 3.45Å; I17-K19 PolarHBondContact O-N 3.13Å; I17-K19 VanDerWaalsContact O-N 3.13Å
20	L	61.9	Low	73.5	Confident	214 Å²	214	124.9 Å²	124.9	100%	1.12	66%	0.659	S	S	*	*			trans	-98.5	0	164.5	-78.2	154	0	0	0	109	I17	I17-L20 PolarHBondContact O-N 3.06Å

Retrieved 20 of 20 residues in 13.7 ms (Link to these results)

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