A0A075B709_HUMAN Loading...

T cell receptor alpha joining 13 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B709, Species HUMAN (Homo sapiens, Human), Gene TRAJ13, Length 21 aa.

						>A0A075B709_HUMAN|A0A075B709|TRAJ13
MNSGGYQKVTFGTGTKLQVIP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	57.1	Low	80.8	Confident	247 Å²	247	147.3 Å²	147.3	100%	1.217	79%	0.786	S	S	*	*				0	110.3	0	-86.3	170.7	170.8	0	108	S3	M1-S3 PolarHBondContact O-N 3.14Å
2	N	67.8	Low	82	Confident	154 Å²	154	141 Å²	141	82%	0.824	78%	0.782	S	S	*	*			trans	-85.8	104.9	172.5	-171.7	-51.4	0	0	106.7	G4	N2-G4 PolarHBondContact O-N 2.75Å; N2-G4 VanDerWaalsContact OD1-CA 3.27Å; N2-G4 WeakPolarHBondContact OD1-CA 3.27Å; N2-G4 PolarHBondContact OD1-N 3.38Å
3	S	75.9	Confident	83.1	Confident	114 Å²	114	142.4 Å²	142.4	80%	0.797	80%	0.797	S	S	*	*			trans	-74.2	66.4	168.6	53.8	0	0	0	108.4	M1 G5	M1-S3 PolarHBondContact O-N 3.14Å; S3-G5 PolarHBondContact O-N 3.06Å
4	G	71.3	Confident	84.1	Confident	19 Å²	19	136.3 Å²	136.3	20%	0.196	78%	0.782	C	S	.	*			trans	-58.8	136.2	179.4	0	0	0	0	109.4	N2 Y6	N2-G4 PolarHBondContact O-N 2.75Å; N2-G4 VanDerWaalsContact OD1-CA 3.27Å; N2-G4 WeakPolarHBondContact OD1-CA 3.27Å; N2-G4 PolarHBondContact OD1-N 3.38Å; G4-Y6 PolarHBondContact O-N 3.44Å
5	G	80	Confident	85	Confident	84 Å²	84	136.3 Å²	136.3	87%	0.866	79%	0.786	S	S	*	*	S	Bend	trans	-67.8	37.9	-178.2	0	0	0	0	115	S3 Q7	S3-G5 PolarHBondContact O-N 3.06Å; G5-Q7 VanDerWaalsContact C-N 3.29Å
6	Y	83.3	Confident	85.7	Confident	217 Å²	217	139.2 Å²	139.2	85%	0.851	79%	0.786	S	S	*	*			trans	-82.6	-6	177.8	-64.1	-82.3	0	0	113.1	G4	G4-Y6 PolarHBondContact O-N 3.44Å
7	Q	87.4	Confident	86.3	Confident	166 Å²	166	139.9 Å²	139.9	78%	0.776	79%	0.787	S	S	*	*	S	Bend	trans	-79.2	137.4	176.6	-66.5	-179	79	0	110	G5	G5-Q7 VanDerWaalsContact C-N 3.29Å
8	K	88.1	Confident	86.9	Confident	198 Å²	198	139.6 Å²	139.6	86%	0.861	78%	0.778	S	S	*	*	P	Polyproline II helix	trans	-64.7	136.9	176.9	-67.5	-176.7	178.9	-179.5	109.8
9	V	89.5	Confident	87.4	Confident	114 Å²	114	138.5 Å²	138.5	69%	0.691	78%	0.775	S	S	*	*	P	Polyproline II helix	trans	-78.1	120.3	167.1	-179.2	0	0	0	107.9	F11	V9-F11 HydrophobicContact CG1-CE1 4.2Å; V9-F11 HydrophobicContact CG1-CE2 4.15Å; V9-F11 HydrophobicContact CG1-CZ 3.9Å
10	T	92.8	Very high	87.8	Confident	126 Å²	126	138.1 Å²	138.1	77%	0.773	77%	0.769	S	S	*	*			trans	-106.3	120.9	176.3	-57.7	0	0	0	109.1
11	F	95.1	Very high	88	Confident	181 Å²	181	140.5 Å²	140.5	79%	0.794	79%	0.791	S	S	*	*			trans	-86.6	138.6	173.7	-62.9	-77.1	0	0	110.5	V9	V9-F11 HydrophobicContact CG1-CE1 4.2Å; V9-F11 HydrophobicContact CG1-CE2 4.15Å; V9-F11 HydrophobicContact CG1-CZ 3.9Å
12	G	95.3	Very high	89.5	Confident	72 Å²	72	135.2 Å²	135.2	74%	0.742	77%	0.77	S	S	*	*			trans	-78.7	-176.9	170.5	0	0	0	0	112.1	G14	G12-G14 PolarHBondContact O-N 2.89Å; G12-G14 VanDerWaalsContact O-N 3.14Å
13	T	97.1	Very high	90.7	Very high	159 Å²	159	134.2 Å²	134.2	98%	0.975	77%	0.767	S	S	*	*			trans	-66.3	-13	178.9	54.1	0	0	0	114.2
14	G	96.6	Very high	91.5	Very high	57 Å²	57	135.3 Å²	135.3	59%	0.588	77%	0.766	S	S	*	*			trans	75.3	177.1	-172.7	0	0	0	0	113	G12	G12-G14 PolarHBondContact O-N 2.89Å; G12-G14 VanDerWaalsContact O-N 3.14Å
15	T	96.9	Very high	92.7	Very high	137 Å²	137	142.2 Å²	142.2	84%	0.84	80%	0.799	S	S	*	*			trans	-124.4	128.7	177.6	-57	0	0	0	108.6	L17	T15-L17 PolarHBondContact O-N 3.48Å
16	K	96.2	Very high	93.5	Very high	182 Å²	182	145.8 Å²	145.8	79%	0.791	80%	0.795	S	S	*	*			trans	-81.9	108.7	170.1	-176.6	179.4	176.4	-175.2	108.7
17	L	96.6	Very high	94.2	Very high	151 Å²	151	141.1 Å²	141.1	79%	0.791	79%	0.791	S	S	*	*			trans	-91.7	125	169.8	-177.8	62.3	0	0	109.1	T15	T15-L17 PolarHBondContact O-N 3.48Å
18	Q	97.1	Very high	94.6	Very high	134 Å²	134	139.3 Å²	139.3	63%	0.626	79%	0.793	S	S	*	*			trans	-116.7	119.3	174.1	-178.8	171	-36	0	108.6	I20	Q18-I20 HydrophobicContact CG-CG1 4.47Å
19	V	96.7	Very high	95.1	Very high	120 Å²	120	134.8 Å²	134.8	73%	0.727	79%	0.787	S	S	*	*			trans	-96.3	122.3	172.9	-177	0	0	0	107.4
20	I	94.3	Very high	95.6	Very high	129 Å²	129	136.5 Å²	136.5	66%	0.662	80%	0.795	S	S	*	*			trans	-98.8	128.1	169.5	-57.8	174.6	0	0	105.1	Q18	Q18-I20 HydrophobicContact CG-CG1 4.47Å
21	P	92.6	Very high	95.9	Very high	190 Å²	190	137.5 Å²	137.5	100%	1.234	80%	0.797	S	S	*	*			trans	-52.1	0	176.3	-25.1	33.9	0	0	113.2

Retrieved 21 of 21 residues in 4.7 ms (Link to these results)

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