A0A075B710_HUMAN Loading...

T cell receptor alpha joining 39 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B710, Species HUMAN (Homo sapiens, Human), Gene TRAJ39, Length 21 aa.

						>A0A075B710_HUMAN|A0A075B710|TRAJ39
XNNNAGNMLTFGGGTRLMVKP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	58.6	Low	79.1	Confident	108 Å²	108	131 Å²	131	100%	1.113	80%	0.795	S	S	*	*				0	123.9	0	0	0	0	0	0	108	N3	G1-N3 PolarHBondContact O-N 3.23Å; G1-N3 VanDerWaalsContact O-N 3.12Å
2	N	71.1	Confident	80.3	Confident	159 Å²	159	125.8 Å²	125.8	85%	0.85	79%	0.788	S	S	*	*			trans	-75.9	98.9	176.5	-80.9	-7.3	0	0	0	108.7	N4	N2-N4 VanDerWaalsContact C-N 3.33Å; N2-N4 PolarHBondContact O-N 3.26Å
3	N	70.2	Confident	81.6	Confident	144 Å²	144	123.4 Å²	123.4	77%	0.77	80%	0.802	S	S	*	*			trans	-79.1	83.1	177.9	-59.1	-29.8	0	0	0	108.6	X1 A5	G1-N3 PolarHBondContact O-N 3.23Å; G1-N3 VanDerWaalsContact O-N 3.12Å; N3-A5 PolarHBondContact O-N 3.01Å
4	N	72.7	Confident	82.6	Confident	137 Å²	137	119.4 Å²	119.4	73%	0.733	79%	0.794	S	S	*	*	G	3₁₀ helix	trans	-67.3	12	172.2	-78.5	-25.8	0	0	0	113.5	N2 G6 N7	N2-N4 VanDerWaalsContact C-N 3.33Å; N2-N4 PolarHBondContact O-N 3.26Å; N4-G6 PolarHBondContact O-N 3.35Å; N4-N7 PolarHBondContact O-N 3.49Å
5	A	74	Confident	83.5	Confident	90 Å²	90	120.7 Å²	120.7	74%	0.744	80%	0.798	S	S	*	*	G	3₁₀ helix	trans	-66.2	-16.6	179.7	0	0	0	0	0	113.5	N3 N7	N3-A5 PolarHBondContact O-N 3.01Å; A5-N7 VanDerWaalsContact C-N 3.34Å
6	G	81.4	Confident	84.2	Confident	78 Å²	78	128.7 Å²	128.7	80%	0.804	81%	0.807	S	S	*	*	G	3₁₀ helix	trans	-81	-7.5	176.3	0	0	0	0	0	115	N4 M8	N4-G6 PolarHBondContact O-N 3.35Å; G6-M8 PolarHBondContact O-N 3.12Å
7	N	84.7	Confident	84.9	Confident	141 Å²	141	130.5 Å²	130.5	75%	0.754	81%	0.809	S	S	*	*	G	3₁₀ helix	trans	-90	18.6	-177.2	-146.6	62.2	0	0	0	113.2	N4 A5	N4-N7 PolarHBondContact O-N 3.49Å; A5-N7 VanDerWaalsContact C-N 3.34Å
8	M	86.2	Confident	85.5	Confident	151 Å²	151	132.2 Å²	132.2	74%	0.744	81%	0.808	S	S	*	*			trans	-81.5	120	175.6	-172.7	171.5	-177.2	0	0	109.8	G6 T10	G6-M8 PolarHBondContact O-N 3.12Å; M8-T10 PolarHBondContact O-N 3.03Å
9	L	89.3	Confident	86	Confident	136 Å²	136	131.8 Å²	131.8	71%	0.712	81%	0.805	S	S	*	*			trans	-86.3	108.8	171.6	-59.9	178.6	0	0	0	109	F11	L9-F11 HydrophobicContact CB-CE2 4.02Å; L9-F11 HydrophobicContact CB-CZ 4.15Å; L9-F11 HydrophobicContact CD1-CZ 4.43Å
10	T	90	Very high	86.4	Confident	122 Å²	122	133.7 Å²	133.7	75%	0.748	80%	0.802	S	S	*	*			trans	-96.5	116.2	172.5	-58.9	0	0	0	0	109.1	M8	M8-T10 PolarHBondContact O-N 3.03Å
11	F	92.7	Very high	86.6	Confident	175 Å²	175	137 Å²	137	77%	0.768	83%	0.827	S	S	*	*			trans	-90.5	136.3	174.9	-61.2	-82.5	0	0	0	110.4	L9	L9-F11 HydrophobicContact CB-CE2 4.02Å; L9-F11 HydrophobicContact CB-CZ 4.15Å; L9-F11 HydrophobicContact CD1-CZ 4.43Å
12	G	93.4	Very high	88	Confident	69 Å²	69	138.5 Å²	138.5	71%	0.711	81%	0.812	S	S	*	*			trans	-80	-171.6	170.9	0	0	0	0	0	112.2	G14	G12-G14 PolarHBondContact O-N 2.96Å
13	G	96.5	Very high	88.9	Confident	94 Å²	94	137.4 Å²	137.4	97%	0.969	81%	0.81	S	S	*	*	S	Bend	trans	-62.3	-11.9	179	0	0	0	0	0	115.3
14	G	95.7	Very high	89.9	Confident	68 Å²	68	137.1 Å²	137.1	70%	0.701	81%	0.813	S	S	*	*			trans	66.1	-170	-178.8	0	0	0	0	0	112.9	G12	G12-G14 PolarHBondContact O-N 2.96Å
15	T	96.6	Very high	90.9	Very high	139 Å²	139	137.1 Å²	137.1	85%	0.853	82%	0.817	S	S	*	*			trans	-138.3	134	171	-64.9	0	0	0	0	107.9
16	R	94.4	Very high	92	Very high	248 Å²	248	140 Å²	140	94%	0.936	82%	0.822	S	S	*	*	P	Polyproline II helix	trans	-85.6	119.7	176.8	-67.3	178.5	174.9	139.5	-1.6	108.7
17	L	95.8	Very high	92.7	Very high	160 Å²	160	144.1 Å²	144.1	84%	0.838	82%	0.823	S	S	*	*	P	Polyproline II helix	trans	-92.3	120	170	-177.9	62.6	0	0	0	108.8
18	M	96	Very high	93.3	Very high	160 Å²	160	144.4 Å²	144.4	79%	0.788	83%	0.828	S	S	*	*	P	Polyproline II helix	trans	-99.9	117.5	176.7	-178.3	177.2	-74.7	0	0	109.7
19	V	95.5	Very high	93.8	Very high	126 Å²	126	143.8 Å²	143.8	76%	0.764	84%	0.835	S	S	*	*	P	Polyproline II helix	trans	-96.6	125.6	171.8	-176.2	0	0	0	0	108
20	K	93	Very high	94.2	Very high	168 Å²	168	144.5 Å²	144.5	73%	0.73	85%	0.845	S	S	*	*	P	Polyproline II helix	trans	-89.7	144.8	171.5	-67.5	175.7	-178.1	150.6	0	108
21	P	90.6	Very high	94.6	Very high	205 Å²	205	146.5 Å²	146.5	100%	1.331	85%	0.854	S	S	*	*			trans	-56.5	0	-179.1	26.6	-35.7	0	0	0	112.2

Retrieved 21 of 21 residues in 7.8 ms (Link to these results)

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