A0A075B711_HUMAN Loading...

T cell receptor alpha joining 29 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B711, Species HUMAN (Homo sapiens, Human), Gene TRAJ29, Length 20 aa.

						>A0A075B711_HUMAN|A0A075B711|TRAJ29
XNSGNTPLVFGKGTRLSVIA
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	75.6	Confident	86.5	Confident	124 Å²	124	113.9 Å²	113.9	100%	1.278	75%	0.749	S	S	*	*				0	131.3	0	0	0	0	0	0	108.7	S3	G1-S3 PolarHBondContact O-N 3.49Å; G1-S3 VanDerWaalsContact C-N 3.32Å
2	N	74.5	Confident	87.3	Confident	165 Å²	165	122.9 Å²	122.9	88%	0.882	77%	0.767	S	S	*	*			trans	-74.6	80.2	-178.6	-80.7	-22.9	0	0	0	110.9	G4	N2-G4 VanDerWaalsContact C-N 3.28Å; N2-G4 PolarHBondContact O-N 2.95Å
3	S	76.6	Confident	88.1	Confident	106 Å²	106	119 Å²	119	74%	0.741	77%	0.765	S	S	*	*	T	Hydrogen-bonded Turn	trans	-81.3	-3.2	178.5	-166.2	0	0	0	0	113.8	X1	G1-S3 PolarHBondContact O-N 3.49Å; G1-S3 VanDerWaalsContact C-N 3.32Å
4	G	81.8	Confident	88.8	Confident	70 Å²	70	116 Å²	116	72%	0.722	74%	0.744	S	S	*	*	T	Hydrogen-bonded Turn	trans	-86	-15.9	-171.7	0	0	0	0	0	115.9	N2	N2-G4 VanDerWaalsContact C-N 3.28Å; N2-G4 PolarHBondContact O-N 2.95Å
5	N	87.3	Confident	89.3	Confident	150 Å²	150	123.6 Å²	123.6	80%	0.802	75%	0.752	S	S	*	*			trans	-110.2	16.6	-170.2	-70.8	30.4	0	0	0	113.2	P7	N5-P7 WeakPolarHBondContact O-CD 3.29Å
6	T	88.1	Confident	89.6	Confident	108 Å²	108	122.6 Å²	122.6	66%	0.663	74%	0.74	S	S	*	*	P	Polyproline II helix	trans	-78.6	117.8	177.2	-54.3	0	0	0	0	109.5
7	P	89.8	Confident	90	Very high	98 Å²	98	122.2 Å²	122.2	64%	0.636	75%	0.745	S	S	*	*	P	Polyproline II helix	trans	-69.4	146.9	179.4	29.2	-34.4	0	0	0	110.8	N5 V9	N5-P7 WeakPolarHBondContact O-CD 3.29Å; P7-V9 HydrophobicContact CG-CG2 4.45Å; P7-V9 PolarHBondContact O-N 2.91Å
8	L	91.4	Very high	90.3	Very high	147 Å²	147	122.9 Å²	122.9	77%	0.77	75%	0.749	S	S	*	*	P	Polyproline II helix	trans	-77.7	116.9	169.1	-59.9	176.9	0	0	0	108.4	F10	L8-F10 HydrophobicContact CB-CE2 4.13Å; L8-F10 HydrophobicContact CB-CZ 4.02Å
9	V	94.6	Very high	90.5	Very high	124 Å²	124	124.9 Å²	124.9	75%	0.752	75%	0.753	S	S	*	*			trans	-109.6	127.9	-179.9	-178.9	0	0	0	0	109.2	P7	P7-V9 HydrophobicContact CG-CG2 4.45Å; P7-V9 PolarHBondContact O-N 2.91Å
10	F	95.1	Very high	90.6	Very high	113 Å²	113	127 Å²	127	50%	0.496	78%	0.784	S	S	.	*			trans	-111.3	132.1	177.7	-55.9	-70.9	0	0	0	110.7	L8 T14 L16	L8-F10 HydrophobicContact CB-CE2 4.13Å; L8-F10 HydrophobicContact CB-CZ 4.02Å; F10-T14 HydrophobicContact CD1-CG2 3.98Å; F10-T14 HydrophobicContact CG-CG2 4.46Å; F10-T14 HydrophobicContact CB-CG2 4.23Å; F10-L16 VanDerWaalsContact CE1-CD2 3.45Å; F10-L16 HydrophobicContact CZ-CG 4.47Å; F10-L16 HydrophobicContact CZ-CD2 3.6Å; F10-L16 HydrophobicContact CZ-CD1 4.04Å; F10-L16 HydrophobicContact CG-CG 4.49Å; F10-L16 HydrophobicContact CG-CD2 4.1Å; F10-L16 HydrophobicContact CG-CD1 4.2Å; F10-L16 HydrophobicContact CE2-CG 4.43Å; F10-L16 HydrophobicContact CE2-CD2 4.03Å; F10-L16 HydrophobicContact CE2-CD1 3.61Å; F10-L16 HydrophobicContact CE1-CD2 3.45Å; F10-L16 HydrophobicContact CD2-CG 4.45Å; F10-L16 HydrophobicContact CD2-CD2 4.27Å; F10-L16 HydrophobicContact CD2-CD1 3.7Å; F10-L16 HydrophobicContact CD1-CD2 3.71Å
11	G	96.2	Very high	90.6	Very high	48 Å²	48	127 Å²	127	50%	0.495	78%	0.784	S	S	.	*			trans	-86.8	169.2	-178.9	0	0	0	0	0	113.3	G13 T14	G11-G13 PolarHBondContact O-N 3.08Å; G11-T14 VanDerWaalsContact O-CB 3.29Å; G11-T14 WeakPolarHBondContact O-CB 3.34Å; G11-T14 PolarHBondContact O-N 3.33Å; G11-T14 VanDerWaalsContact O-N 3.08Å; G11-T14 PolarHBondContact O-OG1 3.43Å
12	K	97	Very high	91.4	Very high	222 Å²	222	127.1 Å²	127.1	97%	0.965	76%	0.758	S	S	*	*	T	Hydrogen-bonded Turn	trans	-52.6	129.5	175.2	-175.9	179.4	179.2	179.7	0	110.8
13	G	97.7	Very high	92.4	Very high	72 Å²	72	125 Å²	125	74%	0.742	75%	0.751	S	S	*	*	T	Hydrogen-bonded Turn	trans	88.5	-7.2	179.7	0	0	0	0	0	115.1	G11	G11-G13 PolarHBondContact O-N 3.08Å
14	T	97.3	Very high	93.3	Very high	77 Å²	77	126.1 Å²	126.1	47%	0.472	75%	0.751	S	S	.	*			trans	-72.5	130.7	174.6	-51.3	0	0	0	0	110.1	F10 G11 L16	F10-T14 HydrophobicContact CD1-CG2 3.98Å; F10-T14 HydrophobicContact CG-CG2 4.46Å; F10-T14 HydrophobicContact CB-CG2 4.23Å; G11-T14 VanDerWaalsContact O-CB 3.29Å; G11-T14 WeakPolarHBondContact O-CB 3.34Å; G11-T14 PolarHBondContact O-N 3.33Å; G11-T14 VanDerWaalsContact O-N 3.08Å; G11-T14 PolarHBondContact O-OG1 3.43Å; T14-L16 HydrophobicContact CG2-CD2 4.46Å
15	R	96	Very high	94	Very high	230 Å²	230	129.6 Å²	129.6	87%	0.868	75%	0.753	S	S	*	*			trans	-111.4	126.5	175.2	-64.7	179.1	179.6	174.3	-0.6	109
16	L	94.9	Very high	94.4	Very high	107 Å²	107	128.3 Å²	128.3	56%	0.56	75%	0.75	S	S	*	*			trans	-96.5	138.5	176.2	-60.2	174.7	0	0	0	109.6	F10 T14	F10-L16 VanDerWaalsContact CE1-CD2 3.45Å; F10-L16 HydrophobicContact CZ-CG 4.47Å; F10-L16 HydrophobicContact CZ-CD2 3.6Å; F10-L16 HydrophobicContact CZ-CD1 4.04Å; F10-L16 HydrophobicContact CG-CG 4.49Å; F10-L16 HydrophobicContact CG-CD2 4.1Å; F10-L16 HydrophobicContact CG-CD1 4.2Å; F10-L16 HydrophobicContact CE2-CG 4.43Å; F10-L16 HydrophobicContact CE2-CD2 4.03Å; F10-L16 HydrophobicContact CE2-CD1 3.61Å; F10-L16 HydrophobicContact CE1-CD2 3.45Å; F10-L16 HydrophobicContact CD2-CG 4.45Å; F10-L16 HydrophobicContact CD2-CD2 4.27Å; F10-L16 HydrophobicContact CD2-CD1 3.7Å; F10-L16 HydrophobicContact CD1-CD2 3.71Å; T14-L16 HydrophobicContact CG2-CD2 4.46Å
17	S	95.8	Very high	94.9	Very high	117 Å²	117	129.7 Å²	129.7	82%	0.818	76%	0.756	S	S	*	*			trans	-118.7	121.9	169.7	-61.1	0	0	0	0	107.6
18	V	95	Very high	95.3	Very high	135 Å²	135	132.2 Å²	132.2	82%	0.818	77%	0.765	S	S	*	*			trans	-105.4	124.7	176.4	-179.5	0	0	0	0	107.2
19	I	94.5	Very high	95.6	Very high	160 Å²	160	130.9 Å²	130.9	82%	0.821	77%	0.765	S	S	*	*			trans	-99.6	125.7	168.9	-56	173.7	0	0	0	105.2
20	A	93.3	Very high	95.7	Very high	166 Å²	166	131.5 Å²	131.5	100%	1.372	77%	0.766	S	S	*	*			trans	-68.1	0	176.2	0	0	0	0	0	111.3

Retrieved 20 of 20 residues in 28.3 ms (Link to these results)

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