A0A075B713_HUMAN Loading...

T cell receptor alpha joining 1 (non-functional) AlphaSync

AlphaFold DB , UniProt , Accession A0A075B713, Species HUMAN (Homo sapiens, Human), Gene TRAJ1, Length 21 aa.

						>A0A075B713_HUMAN|A0A075B713|TRAJ1
MYESITSQLQFGKGTRVSTSP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	70.1	Confident	79.9	Confident	238 Å²	238	156.7 Å²	156.7	100%	1.172	79%	0.786	S	S	*	*				0	134.2	0	-92	-175.2	173	0	0	107.7
2	Y	71.3	Confident	81.2	Confident	220 Å²	220	149.7 Å²	149.7	86%	0.863	78%	0.783	S	S	*	*			trans	-103.6	115	169.7	-169.5	-93.7	0	0	0	106.7
3	E	65.7	Low	82.4	Confident	168 Å²	168	155.5 Å²	155.5	79%	0.785	80%	0.798	S	S	*	*			trans	-84.2	115.9	174.8	-64.5	-164.2	145.4	0	0	108.4	I5	E3-I5 PolarHBondContact O-N 3.39Å
4	S	73.1	Confident	83.3	Confident	88 Å²	88	148.9 Å²	148.9	62%	0.615	79%	0.787	S	S	*	*			trans	-77.5	114.7	172	-165.4	0	0	0	0	108.2	T6	S4-T6 VanDerWaalsContact C-N 3.29Å; S4-T6 PolarHBondContact O-N 3.19Å
5	I	74.2	Confident	84.2	Confident	160 Å²	160	147.9 Å²	147.9	82%	0.821	79%	0.79	S	S	*	*			trans	-75.4	87.7	173.3	-59	171.2	0	0	0	107.3	E3 S7	E3-I5 PolarHBondContact O-N 3.39Å; I5-S7 VanDerWaalsContact C-N 3.3Å; I5-S7 PolarHBondContact O-N 2.95Å
6	T	80.8	Confident	84.9	Confident	113 Å²	113	151.9 Å²	151.9	69%	0.693	79%	0.79	S	S	*	*			trans	-87.5	70.7	172.8	57.2	0	0	0	0	109.6	S4	S4-T6 VanDerWaalsContact C-N 3.29Å; S4-T6 PolarHBondContact O-N 3.19Å
7	S	84.4	Confident	85.5	Confident	97 Å²	97	150 Å²	150	68%	0.678	79%	0.786	S	S	*	*	P	Polyproline II helix	trans	-90.4	127.6	169.7	-168.9	0	0	0	0	109.5	I5	I5-S7 VanDerWaalsContact C-N 3.3Å; I5-S7 PolarHBondContact O-N 2.95Å
8	Q	85.8	Confident	86.1	Confident	174 Å²	174	146.8 Å²	146.8	81%	0.813	78%	0.779	S	S	*	*	P	Polyproline II helix	trans	-94.6	135.3	176.5	-65.3	-67.9	-17.3	0	0	109.7
9	L	89.1	Confident	86.5	Confident	133 Å²	133	145.5 Å²	145.5	70%	0.696	78%	0.777	S	S	*	*	P	Polyproline II helix	trans	-86.2	124.4	175.9	-62.6	176.4	0	0	0	109.9	F11	L9-F11 HydrophobicContact CB-CE2 3.86Å; L9-F11 HydrophobicContact CB-CZ 3.95Å; L9-F11 HydrophobicContact CD1-CZ 3.94Å
10	Q	93.1	Very high	86.7	Confident	177 Å²	177	143.6 Å²	143.6	83%	0.827	78%	0.775	S	S	*	*			trans	-95.7	113.4	168.8	179.1	61	56.1	0	0	109.4
11	F	91.7	Very high	86.9	Confident	156 Å²	156	146.1 Å²	146.1	68%	0.684	80%	0.8	S	S	*	*			trans	-84.6	141	175.1	-63.3	-81.4	0	0	0	111	L9	L9-F11 HydrophobicContact CB-CE2 3.86Å; L9-F11 HydrophobicContact CB-CZ 3.95Å; L9-F11 HydrophobicContact CD1-CZ 3.94Å
12	G	95.6	Very high	87.8	Confident	72 Å²	72	141.6 Å²	141.6	74%	0.742	78%	0.781	S	S	*	*			trans	-79.9	178.9	169.2	0	0	0	0	0	111.9	G14	G12-G14 PolarHBondContact O-N 3.41Å; G12-G14 VanDerWaalsContact O-N 3.09Å
13	K	96.3	Very high	88.6	Confident	226 Å²	226	137.4 Å²	137.4	98%	0.983	78%	0.777	S	S	*	*			trans	-63.9	-15.7	-178.7	-65.9	-177.4	177.3	179.1	0	114.4
14	G	95.3	Very high	89.9	Confident	63 Å²	63	135.7 Å²	135.7	65%	0.649	78%	0.776	S	S	*	*			trans	64.5	-177.6	-170.7	0	0	0	0	0	112.2	G12	G12-G14 PolarHBondContact O-N 3.41Å; G12-G14 VanDerWaalsContact O-N 3.09Å
15	T	96.9	Very high	90.9	Very high	134 Å²	134	138.5 Å²	138.5	82%	0.822	79%	0.786	S	S	*	*			trans	-141.5	133.8	171.8	-61.9	0	0	0	0	108	V17	T15-V17 PolarHBondContact O-N 3.09Å
16	R	94.7	Very high	91.9	Very high	212 Å²	212	137.2 Å²	137.2	80%	0.8	78%	0.783	S	S	*	*			trans	-75	122.2	178.5	-175	176.1	-175.4	-85.8	-1.8	109
17	V	95.6	Very high	92.7	Very high	119 Å²	119	138.8 Å²	138.8	72%	0.721	79%	0.79	S	S	*	*			trans	-100.9	133.8	170.9	-177.1	0	0	0	0	108.3	T15 T19	T15-V17 PolarHBondContact O-N 3.09Å; V17-T19 HydrophobicContact CG1-CG2 4.25Å
18	S	95.9	Very high	93.3	Very high	93 Å²	93	141.8 Å²	141.8	65%	0.65	80%	0.797	S	S	*	*			trans	-119.9	122.9	175.8	-169.1	0	0	0	0	108.2
19	T	93.7	Very high	93.9	Very high	122 Å²	122	139.3 Å²	139.3	75%	0.748	80%	0.796	S	S	*	*			trans	-117.3	137.1	176.1	53.2	0	0	0	0	108.9	V17	V17-T19 HydrophobicContact CG1-CG2 4.25Å
20	S	91.3	Very high	94.3	Very high	106 Å²	106	139.8 Å²	139.8	74%	0.741	81%	0.805	S	S	*	*			trans	-84.9	161	166.6	59.5	0	0	0	0	110
21	P	91	Very high	94.4	Very high	198 Å²	198	136.5 Å²	136.5	100%	1.286	80%	0.803	S	S	*	*			trans	-51.7	0	169.5	-23.7	34.2	0	0	0	113.2

Retrieved 21 of 21 residues in 11.5 ms (Link to these results)

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