A0A075B714_HUMAN Loading...

T cell receptor alpha joining 7 AlphaSync

AlphaFold DB , UniProt , Accession A0A075B714, Species HUMAN (Homo sapiens, Human), Gene TRAJ7, Length 20 aa.

						>A0A075B714_HUMAN|A0A075B714|TRAJ7
XDYGNNRLAFGKGNQVVVIP
					

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(Predicted Aligned Error values between residue pairs)

Download Structure AlphaSync Parameters PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	X	69.1	Low	80.9	Confident	102 Å²	102	133.8 Å²	133.8	100%	1.052	77%	0.771	S	S	*	*				0	121.5	0	0	0	0	0	0	107.2	Y3	G1-Y3 WeakPolarHBondContact O-CD2 3.44Å; G1-Y3 WeakPolarHBondContact O-CE2 3.23Å; G1-Y3 PolarHBondContact O-N 3.43Å; G1-Y3 VanDerWaalsContact O-CD2 3.23Å
2	D	72.9	Confident	82.1	Confident	142 Å²	142	140.9 Å²	140.9	76%	0.759	79%	0.786	S	S	*	*			trans	-78.3	104.2	174	-176.3	5.5	0	0	0	108.4	G4	D2-G4 VanDerWaalsContact C-N 3.25Å; D2-G4 WeakPolarHBondContact OD1-CA 3.47Å; D2-G4 PolarHBondContact OD1-N 3.42Å
3	Y	74.6	Confident	83.2	Confident	185 Å²	185	134.6 Å²	134.6	73%	0.725	77%	0.772	S	S	*	*			trans	-88.2	6.6	176.3	-58.4	-77	0	0	0	111.8	X1 N5 N6	G1-Y3 WeakPolarHBondContact O-CD2 3.44Å; G1-Y3 WeakPolarHBondContact O-CE2 3.23Å; G1-Y3 PolarHBondContact O-N 3.43Å; G1-Y3 VanDerWaalsContact O-CD2 3.23Å; Y3-N5 VanDerWaalsContact C-N 3.28Å; Y3-N5 PolarHBondContact O-N 3.15Å; Y3-N6 PolarHBondContact O-N 3.27Å
4	G	73.3	Confident	84.1	Confident	54 Å²	54	136.2 Å²	136.2	56%	0.557	78%	0.777	S	S	*	*	T	Hydrogen-bonded Turn	trans	-67.5	-21.6	-169.8	0	0	0	0	0	115.3	D2	D2-G4 VanDerWaalsContact C-N 3.25Å; D2-G4 WeakPolarHBondContact OD1-CA 3.47Å; D2-G4 PolarHBondContact OD1-N 3.42Å
5	N	75.6	Confident	84.8	Confident	149 Å²	149	139.2 Å²	139.2	80%	0.797	78%	0.782	S	S	*	*	T	Hydrogen-bonded Turn	trans	-98.4	6.3	-177.3	-74.3	-28.3	0	0	0	114.7	Y3 R7	Y3-N5 VanDerWaalsContact C-N 3.28Å; Y3-N5 PolarHBondContact O-N 3.15Å; N5-R7 PolarHBondContact O-N 3.31Å
6	N	83.1	Confident	85.5	Confident	128 Å²	128	137.9 Å²	137.9	68%	0.684	78%	0.778	S	S	*	*			trans	-86	23.9	178.5	-68	-9.7	0	0	0	113.1	Y3 L8	Y3-N6 PolarHBondContact O-N 3.27Å; N6-L8 PolarHBondContact O-N 3.2Å
7	R	84	Confident	86.2	Confident	228 Å²	228	135.9 Å²	135.9	86%	0.86	77%	0.769	S	S	*	*			trans	-81.5	112.2	-178.3	-163.7	178	-158.6	170.9	7.1	110.4	N5 A9	N5-R7 PolarHBondContact O-N 3.31Å; R7-A9 PolarHBondContact O-N 3.49Å
8	L	87.1	Confident	86.7	Confident	136 Å²	136	135.5 Å²	135.5	71%	0.712	77%	0.77	S	S	*	*			trans	-74.5	122.7	165.2	-61.8	175.8	0	0	0	109.1	N6 F10	N6-L8 PolarHBondContact O-N 3.2Å; L8-F10 HydrophobicContact CB-CE2 3.78Å; L8-F10 HydrophobicContact CB-CZ 4.06Å; L8-F10 HydrophobicContact CD1-CE2 4.45Å; L8-F10 HydrophobicContact CD1-CZ 4.18Å
9	A	86.9	Confident	87.1	Confident	97 Å²	97	135.6 Å²	135.6	80%	0.802	77%	0.766	S	S	*	*			trans	-107.6	122.2	171.2	0	0	0	0	0	108.7	R7	R7-A9 PolarHBondContact O-N 3.49Å
10	F	91.2	Very high	87.3	Confident	178 Å²	178	138.4 Å²	138.4	78%	0.781	79%	0.79	S	S	*	*			trans	-102.5	141.9	175.8	-63.6	-79.8	0	0	0	110	L8	L8-F10 HydrophobicContact CB-CE2 3.78Å; L8-F10 HydrophobicContact CB-CZ 4.06Å; L8-F10 HydrophobicContact CD1-CE2 4.45Å; L8-F10 HydrophobicContact CD1-CZ 4.18Å
11	G	92.6	Very high	87.3	Confident	73 Å²	73	138.4 Å²	138.4	75%	0.753	79%	0.79	S	S	*	*			trans	-74.1	-176	173.4	0	0	0	0	0	112.3	G13	G11-G13 PolarHBondContact O-N 3.3Å; G11-G13 VanDerWaalsContact O-N 3.15Å
12	K	95.4	Very high	88.2	Confident	219 Å²	219	140.3 Å²	140.3	95%	0.952	78%	0.776	S	S	*	*			trans	-62.1	-20.7	178.5	-69.6	-81.8	-178.3	171.3	0	113.7
13	G	95.5	Very high	89.1	Confident	59 Å²	59	140.2 Å²	140.2	61%	0.608	78%	0.777	S	S	*	*			trans	72.9	169.1	-169.6	0	0	0	0	0	111.9	G11	G11-G13 PolarHBondContact O-N 3.3Å; G11-G13 VanDerWaalsContact O-N 3.15Å
14	N	95.7	Very high	89.9	Confident	157 Å²	157	137.5 Å²	137.5	84%	0.84	78%	0.78	S	S	*	*			trans	-117.7	142	171.4	-69.4	-37.6	0	0	0	108.4	V16	N14-V16 PolarHBondContact O-N 2.9Å
15	Q	95.2	Very high	91	Very high	181 Å²	181	142.8 Å²	142.8	85%	0.846	79%	0.794	S	S	*	*			trans	-78.8	117.6	168.4	-174	175.5	6.2	0	0	108.6	V17	Q15-V17 HydrophobicContact CG-CG2 4.24Å
16	V	96	Very high	92	Very high	119 Å²	119	142.3 Å²	142.3	72%	0.721	79%	0.794	S	S	*	*			trans	-97.7	120.8	173.2	-178.4	0	0	0	0	107.7	N14 V18	N14-V16 PolarHBondContact O-N 2.9Å; V16-V18 HydrophobicContact CG1-CG2 4.3Å
17	V	96.6	Very high	92.6	Very high	104 Å²	104	143.4 Å²	143.4	63%	0.63	80%	0.802	S	S	*	*			trans	-107.3	118.4	173.6	-178.1	0	0	0	0	107.5	Q15 I19	Q15-V17 HydrophobicContact CG-CG2 4.24Å; V17-I19 HydrophobicContact CG1-CG1 4.14Å
18	V	96	Very high	93.3	Very high	128 Å²	128	136.8 Å²	136.8	78%	0.776	80%	0.797	S	S	*	*			trans	-98.7	120.3	173.3	-178.2	0	0	0	0	107.6	V16	V16-V18 HydrophobicContact CG1-CG2 4.3Å
19	I	93.7	Very high	93.8	Very high	138 Å²	138	136.9 Å²	136.9	71%	0.708	80%	0.804	S	S	*	*			trans	-106.2	129.6	172.4	-55.9	174	0	0	0	105.4	V17	V17-I19 HydrophobicContact CG1-CG1 4.14Å
20	P	91	Very high	94.4	Very high	190 Å²	190	140.5 Å²	140.5	100%	1.234	80%	0.804	S	S	*	*			trans	-60.7	0	176.9	27.9	-35.3	0	0	0	112.4

Retrieved 20 of 20 residues in 6.9 ms (Link to these results)

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