A0A077QWU1_HUMAN Loading...

Bardet-Biedl syndrome 1 protein

AlphaFold DB , UniProt , Accession A0A077QWU1, Species HUMAN (Homo sapiens, Human), Gene BBS1, Length 53 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1G64.1Low83.6Confident132 Ų132103.1 Ų103.1100%1.36158%0.576SS**  0144.5000000109.9K3G1-K3 PolarHBondContact O-N 3.1Å
2K78.8Confident84.7Confident189 Ų189100.2 Ų100.282%0.82258%0.575SS**  trans-70123.9178.7-175.9176.4179.1-179.30109.4L4K2-L4 PolarHBondContact O-N 2.9Å; K2-L4 VanDerWaalsContact O-N 3.1Å
3K70.2Confident85.5Confident163 Ų16397.2 Ų97.271%0.70955%0.554SS**  trans-67107.4172.7-172.2174177179.20108.4G1 T6G1-K3 PolarHBondContact O-N 3.1Å; K3-T6 WeakPolarHBondContact CE-OG1 3.29Å; K3-T6 PolarHBondContact NZ-OG1 3.29Å
4L76.6Confident86.2Confident137 Ų13799.4 Ų99.472%0.71756%0.563SS**  trans-69.7-42.4-177.4-63.8173.5000110.5K2K2-L4 PolarHBondContact O-N 2.9Å; K2-L4 VanDerWaalsContact O-N 3.1Å
5W85.1Confident86.8Confident82 Ų8298.9 Ų98.931%0.31156%0.563SS.*  trans-171.7173.1179.147.3-95.8000114.1V7 D43 K44W5-V7 HydrophobicContact CE3-CG2 3.96Å; W5-V7 HydrophobicContact CZ3-CG2 3.98Å; W5-D43 VanDerWaalsContact CH2-O 3.24Å; W5-D43 WeakPolarHBondContact CH2-O 3.41Å; W5-D43 WeakPolarHBondContact CZ2-O 3.32Å; W5-K44 HydrophobicContact CB-CD 3.83Å; W5-K44 HydrophobicContact CB-CG 3.42Å; W5-K44 VanDerWaalsContact CB-CG 3.42Å; W5-K44 HydrophobicContact CD2-CG 4.22Å; W5-K44 HydrophobicContact CE3-CG 4.5Å; W5-K44 HydrophobicContact CG-CG 3.78Å
6T87.2Confident87.2Confident75 Ų75100.1 Ų100.146%0.4656%0.564SS.*  trans-148.1143.7170.2-63.10000109.1K3K3-T6 WeakPolarHBondContact CE-OG1 3.29Å; K3-T6 PolarHBondContact NZ-OG1 3.29Å
7V88.1Confident87.7Confident38 Ų3899.8 Ų99.823%0.2356%0.561CS.*  trans-124.8138.7173.7179.30000107.6W5 M9 Y41W5-V7 HydrophobicContact CE3-CG2 3.96Å; W5-V7 HydrophobicContact CZ3-CG2 3.98Å; V7-M9 HydrophobicContact CB-CE 3.79Å; V7-M9 HydrophobicContact CG1-CE 3.8Å; V7-Y41 HydrophobicContact CB-CE1 4.45Å; V7-Y41 HydrophobicContact CG1-CE1 3.76Å; V7-Y41 HydrophobicContact CG2-CD1 4.42Å; V7-Y41 HydrophobicContact CG2-CE1 4.25Å
8Q90.9Very high88Confident165 Ų16598.6 Ų98.677%0.77155%0.552SS**  trans-77.9129.8172.8-65.6-63.9-57.400109
9M91.9Very high88.1Confident55 Ų5596.6 Ų96.627%0.27154%0.54SS..  trans-99.6144177-62.8-58.1157.800110.3V7 A11 I13 Y41V7-M9 HydrophobicContact CB-CE 3.79Å; V7-M9 HydrophobicContact CG1-CE 3.8Å; M9-A11 VanDerWaalsContact C-N 3.28Å; M9-A11 WeakPolarHBondContact CB-O 3.32Å; M9-I13 HydrophobicContact CG-CD1 3.99Å; M9-I13 HydrophobicContact CG-CG1 4.03Å; M9-Y41 HydrophobicContact CE-CD2 4.32Å; M9-Y41 HydrophobicContact CE-CE2 3.55Å; M9-Y41 HydrophobicContact SD-CE2 4.05Å
10P92.1Very high88.2Confident73 Ų7397.4 Ų97.447%0.47454%0.539SS..SBendtrans-75.2-20179.535-41.2000112.4L33 E37 R39P10-L33 HydrophobicContact CG-CD1 3.61Å; P10-E37 VanDerWaalsContact CG-OE2 3.23Å; P10-E37 WeakPolarHBondContact CG-OE2 3.23Å; P10-R39 VanDerWaalsContact CD-NH1 3.29Å; P10-R39 VanDerWaalsContact CG-CZ 3.49Å
11A95.1Very high88.2Confident25 Ų2596.5 Ų96.521%0.20753%0.531CS..SBendtrans-147.4168.5179.400000110.7M9 L33 N35M9-A11 VanDerWaalsContact C-N 3.28Å; M9-A11 WeakPolarHBondContact CB-O 3.32Å; A11-L33 HydrophobicContact CB-CB 4.27Å; A11-N35 HydrophobicContact CB-CB 3.93Å
12A95.9Very high88.9Confident68 Ų6898 Ų9856%0.56250%0.503SS*.  trans-62.1137.4178.100000110.8L14 L33 A34A12-L14 PolarHBondContact O-N 2.9Å; A12-L33 CarbonylContact O-C 3.57Å; A12-L33 WeakPolarHBondContact O-CA 3.27Å; A12-A34 HydrophobicContact CB-CB 4.29Å; A12-A34 PolarHBondContact O-N 2.83Å
13I95.1Very high89Confident61 Ų6194.7 Ų94.731%0.31350%0.503SS..EExtended strand (participates in β ladder)trans-79.9120177-52166.5000108.4M9 T15 M16 A31 L33M9-I13 HydrophobicContact CG-CD1 3.99Å; M9-I13 HydrophobicContact CG-CG1 4.03Å; I13-T15 VanDerWaalsContact CG2-O 3.32Å; I13-T15 WeakPolarHBondContact CG2-O 3.46Å; I13-M16 HydrophobicContact CB-CE 3.91Å; I13-M16 HydrophobicContact CD1-CE 3.42Å; I13-M16 VanDerWaalsContact CD1-CE 3.42Å; I13-M16 HydrophobicContact CD1-SD 3.94Å; I13-M16 HydrophobicContact CG1-CE 4.26Å; I13-M16 HydrophobicContact CG2-CE 3.6Å; I13-M16 HydrophobicContact CG2-CG 3.39Å; I13-M16 HydrophobicContact CG2-SD 4.03Å; I13-A31 HydrophobicContact CG2-CB 4.1Å; I13-L33 HydrophobicContact CB-CD2 4.24Å; I13-L33 HydrophobicContact CG1-CD2 3.74Å; I13-L33 HydrophobicContact CG2-CD2 4.43Å
14L95.9Very high89.4Confident128 Ų12896.5 Ų96.567%0.6751%0.505SS*.EExtended strand (participates in β ladder)trans-87.6-38.6177.1-63.5-176000111.7A12 G32 A34A12-L14 PolarHBondContact O-N 2.9Å; L14-G32 PolarHBondContact N-O 3.13Å; L14-A34 HydrophobicContact CD1-CB 4.2Å; L14-A34 HydrophobicContact CD2-CB 4Å; L14-A34 HydrophobicContact CG-CB 4.01Å
15T94.6Very high89.8Confident92 Ų9292.7 Ų92.756%0.56450%0.5SS*.EExtended strand (participates in β ladder)trans-146.6148.9-179.3-1720000110.9I13 A31 G32I13-T15 VanDerWaalsContact CG2-O 3.32Å; I13-T15 WeakPolarHBondContact CG2-O 3.46Å; T15-A31 CarbonylContact O-C 3.56Å; T15-A31 WeakPolarHBondContact O-CA 3.42Å; T15-G32 PolarHBondContact N-O 2.94Å; T15-G32 PolarHBondContact O-N 3.37Å
16M94.4Very high89.8Confident119 Ų11991.3 Ų91.359%0.58650%0.498SS*.EExtended strand (participates in β ladder)trans-133.9141.3173.8-67.4-172.9-117.900110I13 M30 A31I13-M16 HydrophobicContact CB-CE 3.91Å; I13-M16 HydrophobicContact CD1-CE 3.42Å; I13-M16 VanDerWaalsContact CD1-CE 3.42Å; I13-M16 HydrophobicContact CD1-SD 3.94Å; I13-M16 HydrophobicContact CG1-CE 4.26Å; I13-M16 HydrophobicContact CG2-CE 3.6Å; I13-M16 HydrophobicContact CG2-CG 3.39Å; I13-M16 HydrophobicContact CG2-SD 4.03Å; M16-M30 CarbonylContact C-O 3.37Å; M16-M30 VanDerWaalsContact CA-O 3.25Å; M16-M30 WeakPolarHBondContact CA-O 3.23Å; M16-A31 HydrophobicContact CG-CB 4.27Å
17N94.6Very high90Very high95 Ų9593.6 Ų93.651%0.50850%0.503SS..EExtended strand (participates in β ladder)trans-140.7144.8176-170.9-94.7000111M30N17-M30 HydrophobicContact CB-CE 4.29Å; N17-M30 PolarHBondContact N-O 2.64Å; N17-M30 PolarHBondContact O-N 3.45Å
18L92.8Very high90.2Very high77 Ų7791.9 Ų91.940%0.40349%0.493SS..EExtended strand (participates in β ladder)trans-91115.4175.1-173.864.9000109E20 Q27 V29L18-E20 HydrophobicContact CD2-CG 4.42Å; L18-E20 WeakPolarHBondContact CD2-OE1 3.16Å; L18-E20 HydrophobicContact CG-CG 4.23Å; L18-Q27 HydrophobicContact CD1-CG 3.82Å; L18-V29 HydrophobicContact CD1-CG2 4.27Å
19L91Very high90.3Very high62 Ų6286 Ų8633%0.32547%0.469SS..EExtended strand (participates in β ladder)trans-86.2110.8167.5-73.2178.4000109.4Q27 A28 M30 I40L19-Q27 CarbonylContact O-C 3.59Å; L19-Q27 WeakPolarHBondContact O-CA 2.69Å; L19-A28 HydrophobicContact CB-CB 4.22Å; L19-A28 PolarHBondContact N-O 2.84Å; L19-A28 PolarHBondContact O-N 3.46Å; L19-M30 HydrophobicContact CD1-CE 3.98Å; L19-M30 HydrophobicContact CD1-CG 3.39Å; L19-M30 HydrophobicContact CD1-SD 3.44Å; L19-M30 WeakPolarHBondContact CD1-SD 3.39Å; L19-M30 HydrophobicContact CD2-CE 3.43Å; L19-M30 VanDerWaalsContact CD2-CE 3.43Å; L19-M30 HydrophobicContact CD2-SD 4.03Å; L19-M30 HydrophobicContact CG-CE 3.59Å; L19-M30 HydrophobicContact CG-CG 3.68Å; L19-M30 HydrophobicContact CG-SD 3.77Å; L19-I40 HydrophobicContact CD1-CG2 4.21Å
20E90.4Very high90.4Very high111 Ų11185.9 Ų85.952%0.51947%0.468SS..EExtended strand (participates in β ladder)trans-121119.2176.226.3-173.957.700109.6L18 L26L18-E20 HydrophobicContact CD2-CG 4.42Å; L18-E20 WeakPolarHBondContact CD2-OE1 3.16Å; L18-E20 HydrophobicContact CG-CG 4.23Å; E20-L26 WeakPolarHBondContact CA-O 3.24Å
21Q87.1Confident90.6Very high80 Ų8082.5 Ų82.537%0.37445%0.446SS..EExtended strand (participates in β ladder)trans-117.894.2174.4-161.9-161.6-11.200109.5S23 R24 G25 L26Q21-S23 VanDerWaalsContact C-N 3.31Å; Q21-S23 PolarHBondContact O-N 3.39Å; Q21-R24 HydrophobicContact CG-CB 4.49Å; Q21-R24 PolarHBondContact O-N 2.77Å; Q21-R24 VanDerWaalsContact O-N 3.09Å; Q21-R24 VanDerWaalsContact OE1-CD 3.3Å; Q21-G25 PolarHBondContact O-N 3.16Å; Q21-L26 HydrophobicContact CB-CB 4.18Å; Q21-L26 PolarHBondContact N-O 3.44Å; Q21-L26 PolarHBondContact O-N 3.33Å
22H79.5Confident90.6Very high164 Ų16481.9 Ų81.976%0.75944%0.442SS*.G310 helixtrans-54.5-42.8-177-71.6-84.6000113.2R24 G25H22-R24 PolarHBondContact O-N 3.26Å; H22-G25 PolarHBondContact O-N 3.07Å
23S80.8Confident90.6Very high119 Ų11979 Ų7983%0.83242%0.417SS*.G310 helixtrans-66-20.1-178.4-47.50000114.3Q21Q21-S23 VanDerWaalsContact C-N 3.31Å; Q21-S23 PolarHBondContact O-N 3.39Å
24R78.8Confident90.6Very high200 Ų20078.9 Ų78.976%0.75543%0.426SS*.G310 helixtrans-114.92.9-179.6-68.8-165.6-175.7-170-1.3113.4Q21 H22 L26Q21-R24 HydrophobicContact CG-CB 4.49Å; Q21-R24 PolarHBondContact O-N 2.77Å; Q21-R24 VanDerWaalsContact O-N 3.09Å; Q21-R24 VanDerWaalsContact OE1-CD 3.3Å; H22-R24 PolarHBondContact O-N 3.26Å; R24-L26 PolarHBondContact O-N 3.07Å; R24-L26 VanDerWaalsContact O-N 3.16Å
25G83.8Confident90.6Very high58 Ų5876.5 Ų76.560%0.59841%0.414SS*.THydrogen-bonded Turntrans57.126.8-17500000113.1Q21 H22Q21-G25 PolarHBondContact O-N 3.16Å; H22-G25 PolarHBondContact O-N 3.07Å
26L85.3Confident90.5Very high52 Ų5273.3 Ų73.327%0.27240%0.399SS..EExtended strand (participates in β ladder)trans-90.4124.9-179.6-177.667.8000108.9E20 Q21 R24E20-L26 WeakPolarHBondContact CA-O 3.24Å; Q21-L26 HydrophobicContact CB-CB 4.18Å; Q21-L26 PolarHBondContact N-O 3.44Å; Q21-L26 PolarHBondContact O-N 3.33Å; R24-L26 PolarHBondContact O-N 3.07Å; R24-L26 VanDerWaalsContact O-N 3.16Å
27Q91.2Very high90.5Very high123 Ų12368.7 Ų68.758%0.57538%0.376SS*.EExtended strand (participates in β ladder)trans-125.1121.8167.4-172174.558.600107.9L18 L19L18-Q27 HydrophobicContact CD1-CG 3.82Å; L19-Q27 CarbonylContact O-C 3.59Å; L19-Q27 WeakPolarHBondContact O-CA 2.69Å
28A92.9Very high90.5Very high3 Ų365.8 Ų65.83%0.02536%0.362CS..EExtended strand (participates in β ladder)trans-142.6153.6-17800000110.7L19 I40 Y41L19-A28 HydrophobicContact CB-CB 4.22Å; L19-A28 PolarHBondContact N-O 2.84Å; L19-A28 PolarHBondContact O-N 3.46Å; A28-I40 HydrophobicContact CB-CG2 4.14Å; A28-Y41 CarbonylContact C-O 3.57Å; A28-Y41 WeakPolarHBondContact CA-O 3.21Å; A28-Y41 VanDerWaalsContact CB-O 3.23Å; A28-Y41 WeakPolarHBondContact CB-O 3.42Å
29V93.3Very high90.7Very high42 Ų4264.1 Ų64.126%0.25535%0.35SS..EExtended strand (participates in β ladder)trans-107.8125175.7177.90000108.5L18 I40 Y41L18-V29 HydrophobicContact CD1-CG2 4.27Å; V29-I40 CarbonylContact O-C 3.6Å; V29-I40 WeakPolarHBondContact O-CA 3.48Å; V29-Y41 PolarHBondContact N-O 3.44Å; V29-Y41 PolarHBondContact O-N 3.45Å
30M94.4Very high90.8Very high51 Ų5162.5 Ų62.525%0.25134%0.341SS..EExtended strand (participates in β ladder)trans-93.8135.7165-65.9-168.1-62.800109.9M16 N17 L19 R39 I40M16-M30 CarbonylContact C-O 3.37Å; M16-M30 VanDerWaalsContact CA-O 3.25Å; M16-M30 WeakPolarHBondContact CA-O 3.23Å; N17-M30 HydrophobicContact CB-CE 4.29Å; N17-M30 PolarHBondContact N-O 2.64Å; N17-M30 PolarHBondContact O-N 3.45Å; L19-M30 HydrophobicContact CD1-CE 3.98Å; L19-M30 HydrophobicContact CD1-CG 3.39Å; L19-M30 HydrophobicContact CD1-SD 3.44Å; L19-M30 WeakPolarHBondContact CD1-SD 3.39Å; L19-M30 HydrophobicContact CD2-CE 3.43Å; L19-M30 VanDerWaalsContact CD2-CE 3.43Å; L19-M30 HydrophobicContact CD2-SD 4.03Å; L19-M30 HydrophobicContact CG-CE 3.59Å; L19-M30 HydrophobicContact CG-CG 3.68Å; L19-M30 HydrophobicContact CG-SD 3.77Å; M30-R39 CarbonylContact C-O 3.54Å; M30-R39 WeakPolarHBondContact CA-O 3.44Å; M30-I40 HydrophobicContact CG-CD1 4.27Å; M30-I40 HydrophobicContact CG-CG1 3.99Å; M30-I40 HydrophobicContact CG-CG2 4.27Å; M30-I40 HydrophobicContact SD-CD1 4.23Å; M30-I40 HydrophobicContact SD-CG1 4.49Å
31A95.3Very high91Very high2 Ų257.7 Ų57.72%0.01732%0.318CS..EExtended strand (participates in β ladder)trans-126.9119173.500000109.4I13 T15 M16 L33 V38 R39I13-A31 HydrophobicContact CG2-CB 4.1Å; T15-A31 CarbonylContact O-C 3.56Å; T15-A31 WeakPolarHBondContact O-CA 3.42Å; M16-A31 HydrophobicContact CG-CB 4.27Å; A31-L33 HydrophobicContact CB-CD2 4.32Å; A31-V38 WeakPolarHBondContact O-CA 3.08Å; A31-R39 PolarHBondContact N-O 3.21Å; A31-R39 PolarHBondContact O-N 3.27Å
32G95.8Very high91.1Very high12 Ų1259.4 Ų59.412%0.12432%0.321CS..EExtended strand (participates in β ladder)trans-88.1127169.300000109.8L14 T15L14-G32 PolarHBondContact N-O 3.13Å; T15-G32 PolarHBondContact N-O 2.94Å; T15-G32 PolarHBondContact O-N 3.37Å
33L96.2Very high91.5Very high7 Ų756.7 Ų56.74%0.03731%0.312CS..EExtended strand (participates in β ladder)trans-107.4155.7-172.6-54.9-172.9000111.7P10 A11 A12 I13 A31 N35 G36 E37 R39P10-L33 HydrophobicContact CG-CD1 3.61Å; A11-L33 HydrophobicContact CB-CB 4.27Å; A12-L33 CarbonylContact O-C 3.57Å; A12-L33 WeakPolarHBondContact O-CA 3.27Å; I13-L33 HydrophobicContact CB-CD2 4.24Å; I13-L33 HydrophobicContact CG1-CD2 3.74Å; I13-L33 HydrophobicContact CG2-CD2 4.43Å; A31-L33 HydrophobicContact CB-CD2 4.32Å; L33-N35 WeakPolarHBondContact CB-OD1 3.49Å; L33-N35 PolarHBondContact O-N 2.87Å; L33-N35 VanDerWaalsContact O-N 3.16Å; L33-G36 PolarHBondContact O-N 2.75Å; L33-G36 VanDerWaalsContact O-N 3.16Å; L33-E37 HydrophobicContact CB-CB 4.34Å; L33-E37 VanDerWaalsContact CB-O 3.32Å; L33-E37 WeakPolarHBondContact CB-O 3.34Å; L33-E37 HydrophobicContact CD1-CB 4.11Å; L33-E37 HydrophobicContact CG-CB 4.47Å; L33-E37 PolarHBondContact N-O 2.85Å; L33-R39 HydrophobicContact CD1-CG 4.2Å
34A95.6Very high91.8Very high60 Ų6057.5 Ų57.550%0.49630%0.301SS..THydrogen-bonded Turntrans-66.8-13.8-17700000114.8A12 L14A12-A34 HydrophobicContact CB-CB 4.29Å; A12-A34 PolarHBondContact O-N 2.83Å; L14-A34 HydrophobicContact CD1-CB 4.2Å; L14-A34 HydrophobicContact CD2-CB 4Å; L14-A34 HydrophobicContact CG-CB 4.01Å
35N94.1Very high92.3Very high78 Ų7850.6 Ų50.642%0.41729%0.287SS..THydrogen-bonded Turntrans-94.412.7176.764-9.7000113.3A11 L33 E37A11-N35 HydrophobicContact CB-CB 3.93Å; L33-N35 WeakPolarHBondContact CB-OD1 3.49Å; L33-N35 PolarHBondContact O-N 2.87Å; L33-N35 VanDerWaalsContact O-N 3.16Å; N35-E37 VanDerWaalsContact C-N 3.27Å; N35-E37 PolarHBondContact ND2-OE2 2.88Å; N35-E37 PolarHBondContact O-N 2.84Å; N35-E37 WeakPolarHBondContact OD1-CB 3.43Å; N35-E37 PolarHBondContact OD1-N 2.9Å; N35-E37 PolarHBondContact OD1-OE2 3.09Å
36G93.4Very high92.7Very high24 Ų2451.8 Ų51.825%0.24728%0.279CS..SBendtrans7710-178.900000114.1L33 T52L33-G36 PolarHBondContact O-N 2.75Å; L33-G36 VanDerWaalsContact O-N 3.16Å; G36-T52 PolarHBondContact O-N 2.79Å; G36-T52 PolarHBondContact O-OG1 2.75Å
37E95.1Very high93Very high22 Ų2253.8 Ų53.810%0.10329%0.29CS..EExtended strand (participates in β ladder)trans-85.4141168.3-71.7177.4111.500110.5P10 L33 N35 R39 D49 I50P10-E37 VanDerWaalsContact CG-OE2 3.23Å; P10-E37 WeakPolarHBondContact CG-OE2 3.23Å; L33-E37 HydrophobicContact CB-CB 4.34Å; L33-E37 VanDerWaalsContact CB-O 3.32Å; L33-E37 WeakPolarHBondContact CB-O 3.34Å; L33-E37 HydrophobicContact CD1-CB 4.11Å; L33-E37 HydrophobicContact CG-CB 4.47Å; L33-E37 PolarHBondContact N-O 2.85Å; N35-E37 VanDerWaalsContact C-N 3.27Å; N35-E37 PolarHBondContact ND2-OE2 2.88Å; N35-E37 PolarHBondContact O-N 2.84Å; N35-E37 WeakPolarHBondContact OD1-CB 3.43Å; N35-E37 PolarHBondContact OD1-N 2.9Å; N35-E37 PolarHBondContact OD1-OE2 3.09Å; E37-R39 IonicContact OE1-CZ 3.7Å; E37-R39 IonicContact OE1-NE 2.94Å; E37-R39 IonicContact OE1-NH2 2.84Å; E37-R39 PolarHBondContact OE1-NH2 3.16Å; E37-R39 IonicContact OE2-NH2 3.46Å; E37-R39 PolarHBondContact OE2-NH2 2.88Å; E37-D49 VanDerWaalsContact OE1-OD2 3.12Å; E37-I50 CarbonylContact C-O 3.59Å
38V94.9Very high93Very high35 Ų3551.8 Ų51.821%0.21228%0.283CS..EExtended strand (participates in β ladder)trans-116.8121.2165.7177.70000108A31 I50 T52A31-V38 WeakPolarHBondContact O-CA 3.08Å; V38-I50 HydrophobicContact CB-CB 4.29Å; V38-I50 PolarHBondContact N-O 3.19Å; V38-I50 PolarHBondContact O-N 2.82Å; V38-T52 HydrophobicContact CG2-CG2 3.86Å
39R95.1Very high93Very high42 Ų4253.8 Ų53.816%0.15829%0.293CS..EExtended strand (participates in β ladder)trans-111.3134.8-178.3-64.8-167.5172.2-170.6-2.6111.6P10 M30 A31 L33 E37 Y41 L46 D49P10-R39 VanDerWaalsContact CD-NH1 3.29Å; P10-R39 VanDerWaalsContact CG-CZ 3.49Å; M30-R39 CarbonylContact C-O 3.54Å; M30-R39 WeakPolarHBondContact CA-O 3.44Å; A31-R39 PolarHBondContact N-O 3.21Å; A31-R39 PolarHBondContact O-N 3.27Å; L33-R39 HydrophobicContact CD1-CG 4.2Å; E37-R39 IonicContact OE1-CZ 3.7Å; E37-R39 IonicContact OE1-NE 2.94Å; E37-R39 IonicContact OE1-NH2 2.84Å; E37-R39 PolarHBondContact OE1-NH2 3.16Å; E37-R39 IonicContact OE2-NH2 3.46Å; E37-R39 PolarHBondContact OE2-NH2 2.88Å; R39-Y41 HydrophobicContact CB-CD2 4.21Å; R39-Y41 HydrophobicContact CB-CE2 3.5Å; R39-Y41 WeakPolarHBondContact CD-OH 3.32Å; R39-Y41 HydrophobicContact CG-CE2 4.49Å; R39-L46 HydrophobicContact CB-CD1 3.93Å; R39-L46 HydrophobicContact CG-CD1 4.25Å; R39-D49 VanDerWaalsContact CG-OD2 3.27Å; R39-D49 WeakPolarHBondContact CG-OD2 3.44Å; R39-D49 IonicContact CZ-OD2 3.7Å; R39-D49 IonicContact NE-OD2 3.68Å; R39-D49 PolarHBondContact NE-OD2 2.9Å; R39-D49 IonicContact NH2-OD2 3.71Å
40I94.6Very high93Very high27 Ų2755.1 Ų55.114%0.13830%0.298CS..EExtended strand (participates in β ladder)trans-112.6120.1178-47-170000109L19 A28 V29 M30 L47 N48 I50L19-I40 HydrophobicContact CD1-CG2 4.21Å; A28-I40 HydrophobicContact CB-CG2 4.14Å; V29-I40 CarbonylContact O-C 3.6Å; V29-I40 WeakPolarHBondContact O-CA 3.48Å; M30-I40 HydrophobicContact CG-CD1 4.27Å; M30-I40 HydrophobicContact CG-CG1 3.99Å; M30-I40 HydrophobicContact CG-CG2 4.27Å; M30-I40 HydrophobicContact SD-CD1 4.23Å; M30-I40 HydrophobicContact SD-CG1 4.49Å; I40-L47 HydrophobicContact CG2-CB 4.48Å; I40-L47 PolarHBondContact O-N 3.16Å; I40-N48 HydrophobicContact CB-CB 4.36Å; I40-N48 HydrophobicContact CD1-CB 4.35Å; I40-N48 HydrophobicContact CG1-CB 4.33Å; I40-N48 PolarHBondContact N-O 2.86Å; I40-N48 PolarHBondContact O-N 3.3Å; I40-I50 HydrophobicContact CD1-CD1 4.12Å
41Y93.3Very high92.9Very high10 Ų1059.3 Ų59.34%0.03932%0.317CS..EExtended strand (participates in β ladder)trans-114.5138.3-179.6-69.5-83.9000111.8V7 M9 A28 V29 R39 A45 L46V7-Y41 HydrophobicContact CB-CE1 4.45Å; V7-Y41 HydrophobicContact CG1-CE1 3.76Å; V7-Y41 HydrophobicContact CG2-CD1 4.42Å; V7-Y41 HydrophobicContact CG2-CE1 4.25Å; M9-Y41 HydrophobicContact CE-CD2 4.32Å; M9-Y41 HydrophobicContact CE-CE2 3.55Å; M9-Y41 HydrophobicContact SD-CE2 4.05Å; A28-Y41 CarbonylContact C-O 3.57Å; A28-Y41 WeakPolarHBondContact CA-O 3.21Å; A28-Y41 VanDerWaalsContact CB-O 3.23Å; A28-Y41 WeakPolarHBondContact CB-O 3.42Å; V29-Y41 PolarHBondContact N-O 3.44Å; V29-Y41 PolarHBondContact O-N 3.45Å; R39-Y41 HydrophobicContact CB-CD2 4.21Å; R39-Y41 HydrophobicContact CB-CE2 3.5Å; R39-Y41 WeakPolarHBondContact CD-OH 3.32Å; R39-Y41 HydrophobicContact CG-CE2 4.49Å; Y41-A45 CarbonylContact C-O 3.58Å; Y41-A45 VanDerWaalsContact CA-O 3.32Å; Y41-A45 WeakPolarHBondContact CA-O 3.41Å; Y41-L46 HydrophobicContact CD1-CB 4.19Å; Y41-L46 HydrophobicContact CD1-CD1 4.22Å; Y41-L46 HydrophobicContact CE1-CB 3.8Å; Y41-L46 HydrophobicContact CE1-CD1 3.72Å; Y41-L46 HydrophobicContact CE1-CG 4.35Å; Y41-L46 HydrophobicContact CE2-CD1 4.09Å
42R90.8Very high92.3Very high116 Ų11662.8 Ų62.844%0.43834%0.338SS..EExtended strand (participates in β ladder)trans-113.1113.3160.5178.6176.3-172.7179.65.3107.6K44 A45 L47R42-K44 PolarHBondContact O-N 2.76Å; R42-K44 VanDerWaalsContact O-N 3.13Å; R42-A45 PolarHBondContact N-O 2.95Å; R42-A45 WeakPolarHBondContact O-CB 3.39Å; R42-A45 PolarHBondContact O-N 2.79Å; R42-L47 HydrophobicContact CB-CD1 3.67Å; R42-L47 HydrophobicContact CB-CD2 4.14Å; R42-L47 HydrophobicContact CB-CG 3.9Å
43D86.5Confident91.4Very high107 Ų10771.6 Ų71.657%0.57239%0.393SS*.THydrogen-bonded Turntrans52.7-115.3-166.4-60.1-80000110.9W5W5-D43 VanDerWaalsContact CH2-O 3.24Å; W5-D43 WeakPolarHBondContact CH2-O 3.41Å; W5-D43 WeakPolarHBondContact CZ2-O 3.32Å
44K87.8Confident91.2Very high137 Ų13774.9 Ų74.960%0.59641%0.411SS*.THydrogen-bonded Turntrans-94.1-10.8175.9-66180-173.9178.60113.7W5 R42W5-K44 HydrophobicContact CB-CD 3.83Å; W5-K44 HydrophobicContact CB-CG 3.42Å; W5-K44 VanDerWaalsContact CB-CG 3.42Å; W5-K44 HydrophobicContact CD2-CG 4.22Å; W5-K44 HydrophobicContact CE3-CG 4.5Å; W5-K44 HydrophobicContact CG-CG 3.78Å; R42-K44 PolarHBondContact O-N 2.76Å; R42-K44 VanDerWaalsContact O-N 3.13Å
45A89.6Confident91Very high55 Ų5575.6 Ų75.646%0.45541%0.406SS..EExtended strand (participates in β ladder)trans-83.6121.8-174.200000109.9Y41 R42 L47Y41-A45 CarbonylContact C-O 3.58Å; Y41-A45 VanDerWaalsContact CA-O 3.32Å; Y41-A45 WeakPolarHBondContact CA-O 3.41Å; R42-A45 PolarHBondContact N-O 2.95Å; R42-A45 WeakPolarHBondContact O-CB 3.39Å; R42-A45 PolarHBondContact O-N 2.79Å; A45-L47 PolarHBondContact O-N 2.86Å
46L92.2Very high90.8Very high83 Ų8375.5 Ų75.544%0.43541%0.406SS..EExtended strand (participates in β ladder)trans-70.1115.2168.3-17866.9000107.9R39 Y41 N48 D49R39-L46 HydrophobicContact CB-CD1 3.93Å; R39-L46 HydrophobicContact CG-CD1 4.25Å; Y41-L46 HydrophobicContact CD1-CB 4.19Å; Y41-L46 HydrophobicContact CD1-CD1 4.22Å; Y41-L46 HydrophobicContact CE1-CB 3.8Å; Y41-L46 HydrophobicContact CE1-CD1 3.72Å; Y41-L46 HydrophobicContact CE1-CG 4.35Å; Y41-L46 HydrophobicContact CE2-CD1 4.09Å; L46-N48 VanDerWaalsContact CD1-O 3.29Å; L46-N48 WeakPolarHBondContact CD1-O 3.25Å; L46-D49 HydrophobicContact CD2-CB 4.49Å
47L91.4Very high90.6Very high94 Ų9478.5 Ų78.549%0.49242%0.415SS..EExtended strand (participates in β ladder)trans-85.6-38.9176.1-64.4-173.3000111.4I40 R42 A45I40-L47 HydrophobicContact CG2-CB 4.48Å; I40-L47 PolarHBondContact O-N 3.16Å; R42-L47 HydrophobicContact CB-CD1 3.67Å; R42-L47 HydrophobicContact CB-CD2 4.14Å; R42-L47 HydrophobicContact CB-CG 3.9Å; A45-L47 PolarHBondContact O-N 2.86Å
48N91.6Very high90.4Very high80 Ų8082.1 Ų82.143%0.42844%0.435SS..EExtended strand (participates in β ladder)trans-156.1150.5-178.6-157.99.4000112.3I40 L46 I50I40-N48 HydrophobicContact CB-CB 4.36Å; I40-N48 HydrophobicContact CD1-CB 4.35Å; I40-N48 HydrophobicContact CG1-CB 4.33Å; I40-N48 PolarHBondContact N-O 2.86Å; I40-N48 PolarHBondContact O-N 3.3Å; L46-N48 VanDerWaalsContact CD1-O 3.29Å; L46-N48 WeakPolarHBondContact CD1-O 3.25Å; N48-I50 WeakPolarHBondContact ND2-CG1 3.05Å
49D92.4Very high90.1Very high46 Ų4685.2 Ų85.225%0.24645%0.449CS..EExtended strand (participates in β ladder)trans-126.5121.7171.4-176.7-91.2000108E37 R39 L46 H51E37-D49 VanDerWaalsContact OE1-OD2 3.12Å; R39-D49 VanDerWaalsContact CG-OD2 3.27Å; R39-D49 WeakPolarHBondContact CG-OD2 3.44Å; R39-D49 IonicContact CZ-OD2 3.7Å; R39-D49 IonicContact NE-OD2 3.68Å; R39-D49 PolarHBondContact NE-OD2 2.9Å; R39-D49 IonicContact NH2-OD2 3.71Å; L46-D49 HydrophobicContact CD2-CB 4.49Å; D49-H51 IonicContact OD1-CD2 3.7Å; D49-H51 IonicContact OD1-CE1 3.97Å; D49-H51 IonicContact OD1-NE2 3.37Å; D49-H51 PolarHBondContact OD1-NE2 2.81Å
50I93.1Very high89.7Confident70 Ų7088.3 Ų88.336%0.35947%0.47SS..EExtended strand (participates in β ladder)trans-122.5121.4-172.5-56168.3000107.8E37 V38 I40 N48E37-I50 CarbonylContact C-O 3.59Å; V38-I50 HydrophobicContact CB-CB 4.29Å; V38-I50 PolarHBondContact N-O 3.19Å; V38-I50 PolarHBondContact O-N 2.82Å; I40-I50 HydrophobicContact CD1-CD1 4.12Å; N48-I50 WeakPolarHBondContact ND2-CG1 3.05Å
51H91.7Very high89.3Confident138 Ų13893 Ų9364%0.63950%0.496SS*.EExtended strand (participates in β ladder)trans-85.7121.1171.7-66.9-88000110D49D49-H51 IonicContact OD1-CD2 3.7Å; D49-H51 IonicContact OD1-CE1 3.97Å; D49-H51 IonicContact OD1-NE2 3.37Å; D49-H51 PolarHBondContact OD1-NE2 2.81Å
52T83.6Confident89Confident75 Ų7599.9 Ų99.946%0.4653%0.534SS..  trans-82133.3170.159.80000109.2G36 V38G36-T52 PolarHBondContact O-N 2.79Å; G36-T52 PolarHBondContact O-OG1 2.75Å; V38-T52 HydrophobicContact CG2-CG2 3.86Å
53P77.2Confident88.8Confident198 Ų19898.5 Ų98.5100%1.28654%0.542SS*.  trans-64.40176.727.7-34.1000113

Retrieved 53 of 53 residues in 69.6 ms (Link to these results)