A0A077YWD9_TRITR Loading...

Uncharacterized protein

AlphaFold DB , UniProt , Accession A0A077YWD9, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 49 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M44.9Very low47.7Very low241 Ų241179.5 Ų179.5100%1.18786%0.857SS**  0129.60-72169150.600108.7
2Q47Very low47.5Very low195 Ų195171.3 Ų171.391%0.91183%0.832SS**  trans53.589.3170.8-66.7171.934.800119.3S4Q2-S4 PolarHBondContact O-N 3.32Å
3K44.6Very low47.9Very low214 Ų214169 Ų16993%0.9383%0.827SS**  trans-65.7108.2160.6-93.7170.3163.5177.80109.6Q5K3-Q5 PolarHBondContact O-N 2.8Å
4S49Very low48.7Very low110 Ų110161.8 Ų161.877%0.76980%0.801SS**  trans-74.1108.3169.9-1610000109.2Q2 R6Q2-S4 PolarHBondContact O-N 3.32Å; S4-R6 PolarHBondContact O-N 3.28Å
5Q53Low50Low198 Ų198151.9 Ų151.993%0.92576%0.755SS**  trans-69.264.1169.8-72.7-164.5-4.200111.2K3 S7K3-Q5 PolarHBondContact O-N 2.8Å; Q5-S7 PolarHBondContact O-N 3.24Å
6R50.6Low51.4Low210 Ų210150.4 Ų150.479%0.79274%0.739SS**  trans-89.388.9175-160.8168-168.7175.74.1108.3S4S4-R6 PolarHBondContact O-N 3.28Å
7S44.5Very low52.7Low93 Ų93141.8 Ų141.865%0.6570%0.697SS**  trans35.594.1155-152.50000114.5Q5 R9Q5-S7 PolarHBondContact O-N 3.24Å; S7-R9 PolarHBondContact O-N 2.8Å
8H49.8Very low53.6Low202 Ų202139.4 Ų139.494%0.93569%0.694SS**  trans-65.731.2164.1-96.1-111.4000112.7P10H8-P10 WeakPolarHBondContact O-CD 3.4Å
9R48.1Very low54.6Low205 Ų205138 Ų13877%0.77469%0.693SS**SBendtrans-69.6120156.4-161.9-174.6176.9-150-5.1104.7S7 K11S7-R9 PolarHBondContact O-N 2.8Å; R9-K11 PolarHBondContact O-N 2.77Å
10P48.5Very low55.6Low101 Ų101132.7 Ų132.766%0.65667%0.668SS**  trans-55.2114.516924-30.9000105.4H8 S12H8-P10 WeakPolarHBondContact O-CD 3.4Å; P10-S12 PolarHBondContact O-N 2.82Å
11K44.6Very low56.6Low206 Ų206133.5 Ų133.590%0.89667%0.67SS**  trans-70.448.3162.4-146.7177.7-174-173.70107R9 N13R9-K11 PolarHBondContact O-N 2.77Å; K11-N13 PolarHBondContact O-N 2.79Å
12S45.5Very low58.1Low80 Ų80126.8 Ų126.856%0.55964%0.635SS**  trans-80.3107.4174.4-170.90000103.9P10 S14P10-S12 PolarHBondContact O-N 2.82Å; S12-S14 PolarHBondContact O-N 3.28Å; S12-S14 VanDerWaalsContact OG-CB 3.27Å; S12-S14 WeakPolarHBondContact OG-CB 3.27Å
13N52.9Low59.4Low142 Ų142121.4 Ų121.476%0.75962%0.618SS**  trans-66.529.4171.3-156.827.8000111.4K11 R35K11-N13 PolarHBondContact O-N 2.79Å; N13-R35 PolarHBondContact O-NH1 2.01Å; N13-R35 PolarHBondContact O-NH2 2.78Å
14S58.4Low60.9Low68 Ų68112 Ų11248%0.47658%0.578SS.*  trans-101.9110-178.5-163.30000107.2S12 Y16S12-S14 PolarHBondContact O-N 3.28Å; S12-S14 VanDerWaalsContact OG-CB 3.27Å; S12-S14 WeakPolarHBondContact OG-CB 3.27Å; S14-Y16 PolarHBondContact O-N 2.76Å
15S68.7Low62.2Low14 Ų14110.2 Ų110.210%0.09857%0.566CS.*  trans-65.2133.9175.7-640000107.4C24 R35 I45S15-C24 WeakPolarHBondContact CB-SG 3.44Å; S15-C24 WeakPolarHBondContact O-CA 3.09Å; S15-C24 WeakPolarHBondContact O-CB 3.49Å; S15-C24 PolarHBondContact O-N 2.79Å; S15-C24 PolarHBondContact O-SG 3.01Å; S15-R35 VanDerWaalsContact CB-CD 3.44Å; S15-R35 WeakPolarHBondContact OG-CD 3.38Å; S15-R35 PolarHBondContact OG-NH1 2.89Å; S15-I45 WeakPolarHBondContact OG-CD1 3.1Å; S15-I45 WeakPolarHBondContact OG-CG1 3.35Å
16Y72.9Confident63.5Low127 Ų127107.8 Ų107.850%0.49855%0.553SS.*EExtended strand (participates in β ladder)trans-114.5137.5176.1-175.5-100.5000107.8S14 P18 E21 Q22 C24S14-Y16 PolarHBondContact O-N 2.76Å; Y16-P18 WeakPolarHBondContact O-CD 3.45Å; Y16-E21 WeakPolarHBondContact OH-CA 3.35Å; Y16-E21 WeakPolarHBondContact OH-CB 3.35Å; Y16-E21 PolarHBondContact OH-O 3.38Å; Y16-Q22 WeakPolarHBondContact CD2-O 3.2Å; Y16-C24 VanDerWaalsContact C-SG 3.6Å
17C73Confident64.8Low5 Ų598.7 Ų98.73%0.03452%0.524CS..EExtended strand (participates in β ladder)trans-95107.6-179.8-165.60000109.5V19 V20 E21 Q22 C37C17-V19 PolarHBondContact O-N 3.21Å; C17-V20 HydrophobicContact CB-CG2 3.63Å; C17-V20 PolarHBondContact O-N 2.83Å; C17-E21 WeakPolarHBondContact O-CA 3.44Å; C17-E21 PolarHBondContact O-N 2.69Å; C17-Q22 PolarHBondContact N-O 3Å; C17-Q22 PolarHBondContact O-N 2.96Å; C17-C37 HydrophobicContact CB-CB 3.73Å; C17-C37 WeakPolarHBondContact CB-SG 3.12Å; C17-C37 WeakPolarHBondContact SG-CB 3.32Å; C17-C37 CovalentContact SG-SG 2.01Å; C17-C37 PolarHBondContact SG-SG 3.4Å
18P69.7Low66.2Low98 Ų98100 Ų10064%0.63652%0.523SS*.THydrogen-bonded Turntrans-68.7-18.1-176.528.9-35.8000112.9Y16Y16-P18 WeakPolarHBondContact O-CD 3.45Å
19V71.7Confident67.2Low113 Ų11393.1 Ų93.169%0.68549%0.492SS*.THydrogen-bonded Turntrans-74.9-35.5-178.8179.70000112.2C17C17-V19 PolarHBondContact O-N 3.21Å
20V75Confident68.4Low32 Ų3287.2 Ų87.219%0.19449%0.488CS..THydrogen-bonded Turntrans-1153.6-175.9-62.90000112.3C17 Q22 C37 T39C17-V20 HydrophobicContact CB-CG2 3.63Å; C17-V20 PolarHBondContact O-N 2.83Å; V20-Q22 HydrophobicContact CG2-CB 3.93Å; V20-Q22 WeakPolarHBondContact O-CG 3.03Å; V20-Q22 PolarHBondContact O-N 3.21Å; V20-Q22 PolarHBondContact O-NE2 3.45Å; V20-C37 HydrophobicContact CG2-CB 3.8Å; V20-T39 HydrophobicContact CG1-CG2 3.66Å
21E76.7Confident69.6Low149 Ų14991.8 Ų91.870%0.69650%0.5SS*.THydrogen-bonded Turntrans46.645-176.5-60.2-164.495.300113.1Y16 C17Y16-E21 WeakPolarHBondContact OH-CA 3.35Å; Y16-E21 WeakPolarHBondContact OH-CB 3.35Å; Y16-E21 PolarHBondContact OH-O 3.38Å; C17-E21 WeakPolarHBondContact O-CA 3.44Å; C17-E21 PolarHBondContact O-N 2.69Å
22Q75.5Confident70.8Confident100 Ų10085.5 Ų85.547%0.46748%0.479SS..EExtended strand (participates in β ladder)trans-134.8152.4-177.5-78.6173.678.500112.1Y16 C17 V20Y16-Q22 WeakPolarHBondContact CD2-O 3.2Å; C17-Q22 PolarHBondContact N-O 3Å; C17-Q22 PolarHBondContact O-N 2.96Å; V20-Q22 HydrophobicContact CG2-CB 3.93Å; V20-Q22 WeakPolarHBondContact O-CG 3.03Å; V20-Q22 PolarHBondContact O-N 3.21Å; V20-Q22 PolarHBondContact O-NE2 3.45Å
23P75.3Confident72.1Confident83 Ų8387.5 Ų87.554%0.53948%0.48SS..EExtended strand (participates in β ladder)trans-61140.6171.427.2-34000110.2
24C76.1Confident73.2Confident15 Ų1582.1 Ų82.110%0.10146%0.458CS..PPolyproline II helixtrans-74.8129.7175.5-61.50000110.4S15 Y16 R35 L36 C43S15-C24 WeakPolarHBondContact CB-SG 3.44Å; S15-C24 WeakPolarHBondContact O-CA 3.09Å; S15-C24 WeakPolarHBondContact O-CB 3.49Å; S15-C24 PolarHBondContact O-N 2.79Å; S15-C24 PolarHBondContact O-SG 3.01Å; Y16-C24 VanDerWaalsContact C-SG 3.6Å; C24-R35 HydrophobicContact CB-CB 3.89Å; C24-L36 CarbonylContact C-O 3.56Å; C24-L36 VanDerWaalsContact CA-O 3.28Å; C24-L36 WeakPolarHBondContact CA-O 2.9Å; C24-C43 HydrophobicContact CB-CB 3.84Å; C24-C43 WeakPolarHBondContact CB-SG 3.28Å; C24-C43 WeakPolarHBondContact SG-CB 3.08Å; C24-C43 CovalentContact SG-SG 1.99Å; C24-C43 PolarHBondContact SG-SG 2.86Å
25S76.5Confident74.1Confident74 Ų7482.7 Ų82.752%0.51745%0.449SS..EExtended strand (participates in β ladder)trans-88.7146.3172.4-61.80000109.9R35 L36S25-R35 CarbonylContact O-C 3.53Å; S25-R35 WeakPolarHBondContact O-CA 3.05Å; S25-L36 PolarHBondContact N-O 2.88Å; S25-L36 PolarHBondContact O-N 2.87Å
26K79Confident74.5Confident147 Ų14783.1 Ų83.164%0.63945%0.451SS*.EExtended strand (participates in β ladder)trans-69.6134.6169-167.2179.1180-168.60108.6E33K26-E33 WeakPolarHBondContact CE-OE1 2.91Å; K26-E33 WeakPolarHBondContact CE-OE2 3.4Å; K26-E33 IonicContact NZ-OE1 2.89Å; K26-E33 PolarHBondContact NZ-OE1 2.89Å; K26-E33 IonicContact NZ-OE2 2.76Å; K26-E33 PolarHBondContact NZ-OE2 3.17Å
27G77.6Confident74.6Confident19 Ų1977.3 Ų77.320%0.19643%0.428CS..EExtended strand (participates in β ladder)trans-164.7169.8177.500000112.4G34G27-G34 PolarHBondContact N-O 2.98Å; G27-G34 CarbonylContact O-C 3.55Å; G27-G34 PolarHBondContact O-N 2.74Å
28I75.4Confident74.5Confident121 Ų12179.9 Ų79.962%0.62146%0.455SS*.EExtended strand (participates in β ladder)trans-109125.9-178.1-56.9171.4000107.6
29L70Confident74.4Confident56 Ų5678.8 Ų78.829%0.29345%0.447SS..EExtended strand (participates in β ladder)trans-133.3115.3177.7-159120.4000110.5T32 L36 R40 R42L29-T32 PolarHBondContact N-O 3.3Å; L29-T32 PolarHBondContact O-N 1.99Å; L29-L36 HydrophobicContact CB-CD1 4.48Å; L29-L36 HydrophobicContact CB-CD2 3.88Å; L29-L36 HydrophobicContact CD1-CD1 4.31Å; L29-L36 HydrophobicContact CD1-CD2 4.05Å; L29-R40 WeakPolarHBondContact CD1-O 3.27Å; L29-R42 HydrophobicContact CD2-CG 4.11Å; L29-R42 PolarHBondContact O-NH2 2.8Å
30A73.6Confident73.9Confident82 Ų8283.4 Ų83.468%0.67845%0.452SS*.THydrogen-bonded Turntrans52.658.7-17400000111.7T32A30-T32 PolarHBondContact O-N 2.78Å; A30-T32 PolarHBondContact O-OG1 3.19Å
31E72.9Confident73.6Confident196 Ų19688.4 Ų88.492%0.91647%0.471SS*.THydrogen-bonded Turntrans61.7-0179.5-59.8179.987.200116.1
32T69.8Low73.1Confident74 Ų7487.3 Ų87.345%0.45446%0.461SS..EExtended strand (participates in β ladder)trans-99.9120.2175-47.20000110.1L29 A30 R42L29-T32 PolarHBondContact N-O 3.3Å; L29-T32 PolarHBondContact O-N 1.99Å; A30-T32 PolarHBondContact O-N 2.78Å; A30-T32 PolarHBondContact O-OG1 3.19Å; T32-R42 PolarHBondContact OG1-NH2 2.76Å
33E73.5Confident72.9Confident123 Ų12383.1 Ų83.158%0.57544%0.442SS*.EExtended strand (participates in β ladder)trans-68.3129167.9-172.6178.594.600109.8K26K26-E33 WeakPolarHBondContact CE-OE1 2.91Å; K26-E33 WeakPolarHBondContact CE-OE2 3.4Å; K26-E33 IonicContact NZ-OE1 2.89Å; K26-E33 PolarHBondContact NZ-OE1 2.89Å; K26-E33 IonicContact NZ-OE2 2.76Å; K26-E33 PolarHBondContact NZ-OE2 3.17Å
34G76.1Confident72.3Confident29 Ų2986.2 Ų86.230%0.29945%0.454SS..EExtended strand (participates in β ladder)trans-158.4-174.8-179.400000112.7G27G27-G34 PolarHBondContact N-O 2.98Å; G27-G34 CarbonylContact O-C 3.55Å; G27-G34 PolarHBondContact O-N 2.74Å
35R77.2Confident71.4Confident79 Ų7989.7 Ų89.730%0.29847%0.47SS..EExtended strand (participates in β ladder)trans-96.1136169.7-72.4-174.2-174.5176.1-6.5108.4N13 S15 C24 S25 C43 I45N13-R35 PolarHBondContact O-NH1 2.01Å; N13-R35 PolarHBondContact O-NH2 2.78Å; S15-R35 VanDerWaalsContact CB-CD 3.44Å; S15-R35 WeakPolarHBondContact OG-CD 3.38Å; S15-R35 PolarHBondContact OG-NH1 2.89Å; C24-R35 HydrophobicContact CB-CB 3.89Å; S25-R35 CarbonylContact O-C 3.53Å; S25-R35 WeakPolarHBondContact O-CA 3.05Å; R35-C43 HydrophobicContact CB-CB 4Å; R35-C43 WeakPolarHBondContact O-CA 3.49Å; R35-C43 VanDerWaalsContact O-CB 3.27Å; R35-C43 WeakPolarHBondContact O-CB 3.4Å; R35-C43 PolarHBondContact O-N 2.75Å; R35-I45 HydrophobicContact CB-CD1 4.31Å; R35-I45 HydrophobicContact CG-CD1 4.43Å
36L77.1Confident70.2Confident24 Ų2496.5 Ų96.513%0.12649%0.485CS..EExtended strand (participates in β ladder)trans-122.6144.6-174.9-56.2-178.7000110.1C24 S25 L29 K41 R42 C43C24-L36 CarbonylContact C-O 3.56Å; C24-L36 VanDerWaalsContact CA-O 3.28Å; C24-L36 WeakPolarHBondContact CA-O 2.9Å; S25-L36 PolarHBondContact N-O 2.88Å; S25-L36 PolarHBondContact O-N 2.87Å; L29-L36 HydrophobicContact CB-CD1 4.48Å; L29-L36 HydrophobicContact CB-CD2 3.88Å; L29-L36 HydrophobicContact CD1-CD1 4.31Å; L29-L36 HydrophobicContact CD1-CD2 4.05Å; L36-K41 CarbonylContact C-O 3.53Å; L36-K41 WeakPolarHBondContact CA-O 2.96Å; L36-R42 HydrophobicContact CD2-CG 4.26Å; L36-C43 PolarHBondContact O-SG 2.81Å
37C74.8Confident68.8Low5 Ų594.2 Ų94.23%0.03449%0.487CS..EExtended strand (participates in β ladder)trans-79.3149.9165.3-46.60000108.1C17 V20 T39 R40 K41 C43C17-C37 HydrophobicContact CB-CB 3.73Å; C17-C37 WeakPolarHBondContact CB-SG 3.12Å; C17-C37 WeakPolarHBondContact SG-CB 3.32Å; C17-C37 CovalentContact SG-SG 2.01Å; C17-C37 PolarHBondContact SG-SG 3.4Å; V20-C37 HydrophobicContact CG2-CB 3.8Å; C37-T39 PolarHBondContact O-N 3.44Å; C37-R40 PolarHBondContact O-N 3.22Å; C37-K41 PolarHBondContact N-O 2.78Å; C37-C43 PolarHBondContact N-SG 3.33Å; C37-C43 PolarHBondContact SG-SG 3.4Å
38G70.3Confident67.5Low58 Ų5898 Ų9860%0.59851%0.51SS*.THydrogen-bonded Turntrans-51.7-17.6-178.200000115.5R40G38-R40 VanDerWaalsContact C-N 3.28Å; G38-R40 PolarHBondContact O-N 3.32Å
39T68.1Low65.8Low76 Ų76101.5 Ų101.547%0.46655%0.546SS..THydrogen-bonded Turntrans-82.717.7174.851.40000115.1V20 C37 K41V20-T39 HydrophobicContact CG1-CG2 3.66Å; C37-T39 PolarHBondContact O-N 3.44Å; T39-K41 PolarHBondContact O-N 3.25Å; T39-K41 VanDerWaalsContact O-N 3.11Å
40R62.5Low65.6Low210 Ų210103.8 Ų103.879%0.79256%0.559SS**THydrogen-bonded Turntrans55.920.1-171.4-62.4-174174.9-176.4-0.9113.9L29 C37 G38L29-R40 WeakPolarHBondContact CD1-O 3.27Å; C37-R40 PolarHBondContact O-N 3.22Å; G38-R40 VanDerWaalsContact C-N 3.28Å; G38-R40 PolarHBondContact O-N 3.32Å
41K66.8Low65.2Low136 Ų136104.9 Ų104.959%0.59155%0.552SS**EExtended strand (participates in β ladder)trans-90144.9171.4-67.6-171.2177.7-177.50109.2L36 C37 T39 C43L36-K41 CarbonylContact C-O 3.53Å; L36-K41 WeakPolarHBondContact CA-O 2.96Å; C37-K41 PolarHBondContact N-O 2.78Å; T39-K41 PolarHBondContact O-N 3.25Å; T39-K41 VanDerWaalsContact O-N 3.11Å; K41-C43 PolarHBondContact O-N 2.98Å
42R66.2Low64.8Low127 Ų12799.9 Ų99.948%0.47953%0.532SS..EExtended strand (participates in β ladder)trans-57.5128.6171-74.2-176.6175.8177.9-3.2108.2L29 T32 L36 L44L29-R42 HydrophobicContact CD2-CG 4.11Å; L29-R42 PolarHBondContact O-NH2 2.8Å; T32-R42 PolarHBondContact OG1-NH2 2.76Å; L36-R42 HydrophobicContact CD2-CG 4.26Å; R42-L44 PolarHBondContact O-N 3.35Å
43C71.1Confident64.5Low11 Ų11101.4 Ų101.47%0.07454%0.537CS..  trans-63.4109.6162.9-85.40000106.5C24 R35 L36 C37 K41 I45C24-C43 HydrophobicContact CB-CB 3.84Å; C24-C43 WeakPolarHBondContact CB-SG 3.28Å; C24-C43 WeakPolarHBondContact SG-CB 3.08Å; C24-C43 CovalentContact SG-SG 1.99Å; C24-C43 PolarHBondContact SG-SG 2.86Å; R35-C43 HydrophobicContact CB-CB 4Å; R35-C43 WeakPolarHBondContact O-CA 3.49Å; R35-C43 VanDerWaalsContact O-CB 3.27Å; R35-C43 WeakPolarHBondContact O-CB 3.4Å; R35-C43 PolarHBondContact O-N 2.75Å; L36-C43 PolarHBondContact O-SG 2.81Å; C37-C43 PolarHBondContact N-SG 3.33Å; C37-C43 PolarHBondContact SG-SG 3.4Å; K41-C43 PolarHBondContact O-N 2.98Å; C43-I45 PolarHBondContact O-N 3.23Å
44L63Low63.9Low149 Ų149100.1 Ų100.178%0.7853%0.534SS*.  trans-64.783.2162.1-61.8174.1000105.4R42 R46R42-L44 PolarHBondContact O-N 3.35Å; L44-R46 VanDerWaalsContact C-N 3.3Å; L44-R46 PolarHBondContact O-N 2.97Å
45I57.7Low63.1Low88 Ų88104.8 Ų104.845%0.45155%0.55SS.*  trans-56.1112.2156.7-48.6-175.6000101.9S15 R35 C43 S47S15-I45 WeakPolarHBondContact OG-CD1 3.1Å; S15-I45 WeakPolarHBondContact OG-CG1 3.35Å; R35-I45 HydrophobicContact CB-CD1 4.31Å; R35-I45 HydrophobicContact CG-CD1 4.43Å; C43-I45 PolarHBondContact O-N 3.23Å; I45-S47 PolarHBondContact O-N 3.36Å
46R52Low62.1Low217 Ų217106.6 Ų106.682%0.81957%0.568SS**  trans-6484.6164.1-164.9172.794.8167.87.7104.5L44 S48L44-R46 VanDerWaalsContact C-N 3.3Å; L44-R46 PolarHBondContact O-N 2.97Å; R46-S48 PolarHBondContact O-N 3.11Å
47S49Very low60.9Low98 Ų98113 Ų11369%0.68560%0.602SS**  trans-54.6101.2159.2-63.90000102.9I45 S49I45-S47 PolarHBondContact O-N 3.36Å; S47-S49 PolarHBondContact O-N 2.88Å
48S50.8Low59.8Low98 Ų98122 Ų12269%0.68565%0.649SS**  trans-61.2122.3163.1-56.90000103.4R46R46-S48 PolarHBondContact O-N 3.11Å
49S39.8Very low58.8Low196 Ų196127.8 Ų127.8100%1.37165%0.654SS**  trans-32.30-171.3-61.20000115.6S47S47-S49 PolarHBondContact O-N 2.88Å

Retrieved 49 of 49 residues in 146.8 ms (Link to these results)