A0A077YWN7_TRITR Loading...

Lipopolysaccharide induced tumor necrosis

AlphaFold DB , UniProt , Accession A0A077YWN7, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 126 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M39.9Very low36.4Very low249 Ų249151.7 Ų151.7100%1.22780%0.795SS**  01180-81.1169.1174.300107.5
2L30Very low37.4Very low161 Ų161160.7 Ų160.784%0.84381%0.81SS**  trans-79.2124.9-176.4-67.8158.2000109.7
3S39.6Very low38.6Very low123 Ų123162.1 Ų162.186%0.8681%0.812SS**  trans-111.997.8155.436.90000108.3
4F37.9Very low39Very low175 Ų175158.6 Ų158.677%0.76880%0.797SS**  trans-64.6127.5170.4-109.2-112.4000110.6
5F37.6Very low40.1Very low166 Ų166162.3 Ų162.373%0.72880%0.798SS**  trans30.1141.3145.4-89.5-97.3000121.8P7F5-P7 HydrophobicContact CD1-CB 4.5Å
6P34.7Very low41.1Very low121 Ų121163 Ų16379%0.78680%0.795SS**  -126.7154.3108.930.2-18.2000113.2
7P40.8Very low41.8Very low99 Ų99157.4 Ų157.464%0.64378%0.776SS**  trans-85140.8-161.534.2-33.3000113.1F5 Y9F5-P7 HydrophobicContact CD1-CB 4.5Å; P7-Y9 PolarHBondContact O-N 2.88Å
8L32.2Very low42.3Very low137 Ų137152.2 Ų152.272%0.71775%0.754SS**  trans-2.5101.6148.2-75.9165.1000116.1F10L8-F10 HydrophobicContact CB-CB 4.34Å; L8-F10 HydrophobicContact CD2-CD2 3.82Å; L8-F10 PolarHBondContact O-N 3.16Å; L8-F10 VanDerWaalsContact O-N 3.09Å
9Y30Very low43Very low240 Ų240149.6 Ų149.694%0.94175%0.748SS**  trans-77.477150-106.3-98.1000108.2P7 G11P7-Y9 PolarHBondContact O-N 2.88Å; Y9-G11 PolarHBondContact O-N 3.15Å; Y9-G11 VanDerWaalsContact O-N 3.15Å
10F40.4Very low43.7Very low137 Ų137152.3 Ų152.360%0.60175%0.749SS**  trans-86.580.4179.7-149.6-108000109.6L8 R12L8-F10 HydrophobicContact CB-CB 4.34Å; L8-F10 HydrophobicContact CD2-CD2 3.82Å; L8-F10 PolarHBondContact O-N 3.16Å; L8-F10 VanDerWaalsContact O-N 3.09Å; F10-R12 PolarHBondContact O-N 3.1Å
11G37Very low44.2Very low61 Ų61146.5 Ų146.563%0.62972%0.721SS**  trans-57.8132.3167.300000110.3Y9 Q13Y9-G11 PolarHBondContact O-N 3.15Å; Y9-G11 VanDerWaalsContact O-N 3.15Å; G11-Q13 VanDerWaalsContact C-N 3.29Å; G11-Q13 PolarHBondContact O-N 3.36Å
12R48.8Very low44.9Very low259 Ų259138.7 Ų138.798%0.97769%0.687SS**  trans-70.172-170.2-157.1-179-167170.42.8111.6F10F10-R12 PolarHBondContact O-N 3.1Å
13Q52.6Low46Very low179 Ų179134.7 Ų134.784%0.83667%0.671SS**  trans-127.5101.5175.4-149.9167.57.300112.2G11G11-Q13 VanDerWaalsContact C-N 3.29Å; G11-Q13 PolarHBondContact O-N 3.36Å
14N45.1Very low46.9Very low113 Ų113133.4 Ų133.460%0.60465%0.653SS**  trans49.182.9159.9-150.50.4000118.7K16 S17N14-K16 PolarHBondContact O-N 3.14Å; N14-S17 PolarHBondContact O-N 3.27Å; N14-S17 VanDerWaalsContact O-N 3.1Å
15R54.5Low47.8Very low215 Ų215128.6 Ų128.681%0.81164%0.635SS**Hα-helixtrans-47.2-20.3175.7-71.5-175.2-172.1-179.81.8116.2T19R15-T19 PolarHBondContact O-OG1 2.98Å
16K55.9Low48.9Very low173 Ų173127.4 Ų127.475%0.75263%0.63SS**Hα-helixtrans-78.4-22.4-178.5-61.9-172.5-179.3-172.90113.7N14N14-K16 PolarHBondContact O-N 3.14Å
17S53.1Low50Low67 Ų67124.4 Ų124.447%0.46962%0.615SS.*Hα-helixtrans-84.6-41.2-178.7-166.30000112.2N14 T19 R20 L21N14-S17 PolarHBondContact O-N 3.27Å; N14-S17 VanDerWaalsContact O-N 3.1Å; S17-T19 PolarHBondContact O-N 3.35Å; S17-R20 PolarHBondContact O-N 3.48Å; S17-R20 VanDerWaalsContact O-N 3.14Å; S17-L21 PolarHBondContact O-N 3.07Å
18V52Low50.8Low64 Ų64125 Ų12539%0.38861%0.608SS.*Hα-helixtrans-60-43.5-175.3178.30000111.8R20 L21 V22V18-R20 VanDerWaalsContact C-N 3.25Å; V18-R20 PolarHBondContact O-N 2.8Å; V18-L21 PolarHBondContact O-N 3.4Å; V18-L21 VanDerWaalsContact O-N 3.15Å; V18-V22 WeakPolarHBondContact O-CG2 3.42Å; V18-V22 PolarHBondContact O-N 3.33Å
19T54.7Low51.9Low104 Ų104125.6 Ų125.664%0.63860%0.602SS**Hα-helixtrans-67.6-22.3-178.69.60000113.8R15 S17 P23R15-T19 PolarHBondContact O-OG1 2.98Å; S17-T19 PolarHBondContact O-N 3.35Å; T19-P23 WeakPolarHBondContact O-CD 3.25Å
20R57.4Low53Low203 Ų203118.5 Ų118.577%0.76658%0.58SS**Hα-helixtrans-82.2-23.5174.6-81.1-175.3158.8179.4-5.8113.3S17 V18 P23S17-R20 PolarHBondContact O-N 3.48Å; S17-R20 VanDerWaalsContact O-N 3.14Å; V18-R20 VanDerWaalsContact C-N 3.25Å; V18-R20 PolarHBondContact O-N 2.8Å; R20-P23 WeakPolarHBondContact O-CD 3.42Å; R20-P23 WeakPolarHBondContact O-CG 3.42Å
21L54Low53.8Low31 Ų31120.1 Ų120.116%0.16259%0.587CS.*Hα-helixtrans-83.3-31.1-179.6-73163.4000112.9S17 V18 I24 I25 L89S17-L21 PolarHBondContact O-N 3.07Å; V18-L21 PolarHBondContact O-N 3.4Å; V18-L21 VanDerWaalsContact O-N 3.15Å; L21-I24 PolarHBondContact O-N 3.38Å; L21-I25 WeakPolarHBondContact O-CG1 3.44Å; L21-I25 PolarHBondContact O-N 3.02Å; L21-L89 HydrophobicContact CD2-CD2 4.45Å
22V54.7Low54.6Low84 Ų84121.9 Ų121.951%0.50958%0.578SS.*Hα-helixtrans-50.9-49178.1-175.20000113.4V18 I24 I25 F26V18-V22 WeakPolarHBondContact O-CG2 3.42Å; V18-V22 PolarHBondContact O-N 3.33Å; V22-I24 VanDerWaalsContact C-N 3.3Å; V22-I24 PolarHBondContact O-N 3.06Å; V22-I25 PolarHBondContact O-N 3.26Å; V22-F26 PolarHBondContact O-N 3.11Å; V22-F26 VanDerWaalsContact O-N 3.07Å
23P53.6Low54.8Low78 Ų78115.8 Ų115.851%0.50656%0.558SS.*Hα-helixtrans-68.4-27.7179.626.1-34.9000113.4T19 R20 A27T19-P23 WeakPolarHBondContact O-CD 3.25Å; R20-P23 WeakPolarHBondContact O-CD 3.42Å; R20-P23 WeakPolarHBondContact O-CG 3.42Å; P23-A27 VanDerWaalsContact O-CB 3.25Å; P23-A27 WeakPolarHBondContact O-CB 3.41Å; P23-A27 PolarHBondContact O-N 3.4Å
24I58.4Low54.9Low95 Ų95111.4 Ų111.449%0.48755%0.553SS.*Hα-helixtrans-72.6-42.4178.3-60.2168.4000109.9L21 V22 F26 F28L21-I24 PolarHBondContact O-N 3.38Å; V22-I24 VanDerWaalsContact C-N 3.3Å; V22-I24 PolarHBondContact O-N 3.06Å; I24-F26 VanDerWaalsContact C-N 3.35Å; I24-F28 WeakPolarHBondContact O-CB 3.32Å; I24-F28 PolarHBondContact O-N 3.25Å
25I56.9Low55.1Low75 Ų75108.5 Ų108.539%0.38555%0.55SS.*Hα-helixtrans-64-42.1176.7-63.9168.1000110.5L21 V22 F28 Y29 F90L21-I25 WeakPolarHBondContact O-CG1 3.44Å; L21-I25 PolarHBondContact O-N 3.02Å; V22-I25 PolarHBondContact O-N 3.26Å; I25-F28 PolarHBondContact O-N 3.09Å; I25-Y29 PolarHBondContact O-N 3.03Å; I25-F90 HydrophobicContact CD1-CE2 3.88Å; I25-F90 HydrophobicContact CD1-CZ 3.76Å
26F59.4Low55.1Low140 Ų140103.9 Ų103.961%0.61454%0.54SS*.Hα-helixtrans-66.7-47.8179.4-150.2-92.5000111.7V22 I24 F28 Y29 D30V22-F26 PolarHBondContact O-N 3.11Å; V22-F26 VanDerWaalsContact O-N 3.07Å; I24-F26 VanDerWaalsContact C-N 3.35Å; F26-F28 PolarHBondContact O-N 3.15Å; F26-Y29 PolarHBondContact O-N 3.18Å; F26-D30 WeakPolarHBondContact CD1-OD2 3.48Å; F26-D30 PolarHBondContact O-N 2.98Å
27A59Low55Low59 Ų59100.2 Ų100.249%0.48853%0.534SS..Hα-helixtrans-61.8-31.5176.600000112.8P23 F31P23-A27 VanDerWaalsContact O-CB 3.25Å; P23-A27 WeakPolarHBondContact O-CB 3.41Å; P23-A27 PolarHBondContact O-N 3.4Å; A27-F31 WeakPolarHBondContact O-CB 3.34Å; A27-F31 PolarHBondContact O-N 3.02Å; A27-F31 VanDerWaalsContact O-N 3.11Å
28F56.6Low55Low110 Ų110102.9 Ų102.948%0.48255%0.55SS..Hα-helixtrans-76-36.5177.2-146.3-100.2000112.4I24 I25 F26 F31 F32I24-F28 WeakPolarHBondContact O-CB 3.32Å; I24-F28 PolarHBondContact O-N 3.25Å; I25-F28 PolarHBondContact O-N 3.09Å; F26-F28 PolarHBondContact O-N 3.15Å; F28-F31 PolarHBondContact O-N 3.42Å; F28-F32 AromaticContact CD1-CD2 3.84Å; F28-F32 HydrophobicContact CD1-CD2 3.84Å; F28-F32 AromaticContact CD1-CE2 3.93Å; F28-F32 HydrophobicContact CD1-CE2 3.93Å; F28-F32 AromaticContact CE1-CD2 3.71Å; F28-F32 HydrophobicContact CE1-CD2 3.71Å; F28-F32 AromaticContact CE1-CE2 3.29Å; F28-F32 HydrophobicContact CE1-CE2 3.29Å; F28-F32 HydrophobicContact CE1-CZ 4.23Å; F28-F32 HydrophobicContact CZ-CD2 4.36Å; F28-F32 AromaticContact CZ-CE2 3.68Å; F28-F32 HydrophobicContact CZ-CE2 3.68Å; F28-F32 PolarHBondContact O-N 3.34Å; F28-F32 VanDerWaalsContact O-N 3.17Å
29Y54.8Low55.3Low151 Ų151106.7 Ų106.759%0.59256%0.563SS**Hα-helixtrans-62.8-44.9172.6-154.5-98.1000110.7I25 F26 F31 F32 F33I25-Y29 PolarHBondContact O-N 3.03Å; F26-Y29 PolarHBondContact O-N 3.18Å; Y29-F31 PolarHBondContact O-N 3.38Å; Y29-F32 PolarHBondContact O-N 3.23Å; Y29-F33 AromaticContact CD1-CD2 3.62Å; Y29-F33 HydrophobicContact CD1-CD2 3.62Å; Y29-F33 AromaticContact CD1-CE2 3.74Å; Y29-F33 HydrophobicContact CD1-CE2 3.74Å; Y29-F33 HydrophobicContact CD2-CE2 4.11Å; Y29-F33 AromaticContact CE1-CD2 3.49Å; Y29-F33 HydrophobicContact CE1-CD2 3.49Å; Y29-F33 VanDerWaalsContact CE1-CD2 3.49Å; Y29-F33 AromaticContact CE1-CE2 3.19Å; Y29-F33 HydrophobicContact CE1-CE2 3.19Å; Y29-F33 AromaticContact CE1-CZ 3.98Å; Y29-F33 HydrophobicContact CE1-CZ 3.98Å; Y29-F33 HydrophobicContact CE2-CD2 4.4Å; Y29-F33 AromaticContact CE2-CE2 3.62Å; Y29-F33 HydrophobicContact CE2-CE2 3.62Å; Y29-F33 HydrophobicContact CE2-CZ 4.46Å; Y29-F33 HydrophobicContact CG-CD2 4.15Å; Y29-F33 HydrophobicContact CG-CE2 4.17Å; Y29-F33 AromaticContact CZ-CD2 3.92Å; Y29-F33 AromaticContact CZ-CE2 3.12Å; Y29-F33 AromaticContact CZ-CZ 3.76Å; Y29-F33 WeakPolarHBondContact O-CD2 3.44Å; Y29-F33 PolarHBondContact O-N 3.06Å; Y29-F33 WeakPolarHBondContact OH-CE2 3.36Å
30D54.9Low55.4Low90 Ų90106.7 Ų106.748%0.48157%0.565SS.*Hα-helixtrans-62-40.8176.9-71.4-37000112.3F26 F32 A34F26-D30 WeakPolarHBondContact CD1-OD2 3.48Å; F26-D30 PolarHBondContact O-N 2.98Å; D30-F32 VanDerWaalsContact C-N 3.32Å; D30-F32 PolarHBondContact O-N 3Å; D30-A34 WeakPolarHBondContact O-CB 3.26Å; D30-A34 PolarHBondContact O-N 3.29Å
31F55.9Low55.6Low171 Ų171103.3 Ų103.375%0.7557%0.569SS**Hα-helixtrans-67.4-32.5178.8-148.7-89.9000112.6A27 F28 Y29A27-F31 WeakPolarHBondContact O-CB 3.34Å; A27-F31 PolarHBondContact O-N 3.02Å; A27-F31 VanDerWaalsContact O-N 3.11Å; F28-F31 PolarHBondContact O-N 3.42Å; Y29-F31 PolarHBondContact O-N 3.38Å
32F53.7Low55.8Low99 Ų99109 Ų10943%0.43460%0.597SS.*Hα-helixtrans-83.7-36.1-178-97.4-94.1000114F28 Y29 D30 A34 G35F28-F32 AromaticContact CD1-CD2 3.84Å; F28-F32 HydrophobicContact CD1-CD2 3.84Å; F28-F32 AromaticContact CD1-CE2 3.93Å; F28-F32 HydrophobicContact CD1-CE2 3.93Å; F28-F32 AromaticContact CE1-CD2 3.71Å; F28-F32 HydrophobicContact CE1-CD2 3.71Å; F28-F32 AromaticContact CE1-CE2 3.29Å; F28-F32 HydrophobicContact CE1-CE2 3.29Å; F28-F32 HydrophobicContact CE1-CZ 4.23Å; F28-F32 HydrophobicContact CZ-CD2 4.36Å; F28-F32 AromaticContact CZ-CE2 3.68Å; F28-F32 HydrophobicContact CZ-CE2 3.68Å; F28-F32 PolarHBondContact O-N 3.34Å; F28-F32 VanDerWaalsContact O-N 3.17Å; Y29-F32 PolarHBondContact O-N 3.23Å; D30-F32 VanDerWaalsContact C-N 3.32Å; D30-F32 PolarHBondContact O-N 3Å; F32-A34 VanDerWaalsContact C-N 3.34Å; F32-G35 PolarHBondContact O-N 3.28Å
33F54.1Low56.1Low130 Ų130111.5 Ų111.557%0.5761%0.612SS**Hα-helixtrans-72.6-27.8174.5-84.5-87.5000112.8Y29 G35Y29-F33 AromaticContact CD1-CD2 3.62Å; Y29-F33 HydrophobicContact CD1-CD2 3.62Å; Y29-F33 AromaticContact CD1-CE2 3.74Å; Y29-F33 HydrophobicContact CD1-CE2 3.74Å; Y29-F33 HydrophobicContact CD2-CE2 4.11Å; Y29-F33 AromaticContact CE1-CD2 3.49Å; Y29-F33 HydrophobicContact CE1-CD2 3.49Å; Y29-F33 VanDerWaalsContact CE1-CD2 3.49Å; Y29-F33 AromaticContact CE1-CE2 3.19Å; Y29-F33 HydrophobicContact CE1-CE2 3.19Å; Y29-F33 AromaticContact CE1-CZ 3.98Å; Y29-F33 HydrophobicContact CE1-CZ 3.98Å; Y29-F33 HydrophobicContact CE2-CD2 4.4Å; Y29-F33 AromaticContact CE2-CE2 3.62Å; Y29-F33 HydrophobicContact CE2-CE2 3.62Å; Y29-F33 HydrophobicContact CE2-CZ 4.46Å; Y29-F33 HydrophobicContact CG-CD2 4.15Å; Y29-F33 HydrophobicContact CG-CE2 4.17Å; Y29-F33 AromaticContact CZ-CD2 3.92Å; Y29-F33 AromaticContact CZ-CE2 3.12Å; Y29-F33 AromaticContact CZ-CZ 3.76Å; Y29-F33 WeakPolarHBondContact O-CD2 3.44Å; Y29-F33 PolarHBondContact O-N 3.06Å; Y29-F33 WeakPolarHBondContact OH-CE2 3.36Å; F33-G35 PolarHBondContact O-N 3.44Å
34A55.2Low56.3Low87 Ų87111.4 Ų111.472%0.71962%0.619SS**THydrogen-bonded Turntrans-72.2-10.9175.800000113.8D30 F32D30-A34 WeakPolarHBondContact O-CB 3.26Å; D30-A34 PolarHBondContact O-N 3.29Å; F32-A34 VanDerWaalsContact C-N 3.34Å
35G49.1Very low56.2Low53 Ų53112.3 Ų112.355%0.54663%0.628SS.*THydrogen-bonded Turntrans-91.52.4-169.600000116.5F32 F33 P37F32-G35 PolarHBondContact O-N 3.28Å; F33-G35 PolarHBondContact O-N 3.44Å; G35-P37 WeakPolarHBondContact O-CD 3.34Å; G35-P37 VanDerWaalsContact O-N 3.16Å
36I53Low56.1Low117 Ų117115 Ų11560%0.665%0.648SS**  trans-72.1105.9175.8-56.4169.8000107.3
37P54.3Low55.8Low96 Ų96112.2 Ų112.262%0.62364%0.642SS**  trans-64.3142.2175.429.6-34.1000108.4G35 Q39G35-P37 WeakPolarHBondContact O-CD 3.34Å; G35-P37 VanDerWaalsContact O-N 3.16Å; P37-Q39 PolarHBondContact O-N 3.26Å
38P53.8Low55.7Low123 Ų123116 Ų11680%0.79966%0.659SS**  trans-56.5114.4175.423.8-32.3000107.9
39Q57.6Low55.7Low144 Ų144114.4 Ų114.467%0.67366%0.655SS**  trans-58.9129.3177.7-68.7-174.2-6.700107.4P37P37-Q39 PolarHBondContact O-N 3.26Å
40P55.8Low55.9Low105 Ų105109.5 Ų109.568%0.68264%0.642SS**  trans-56.3148.5175.524.3-32.4000108.8M42P40-M42 VanDerWaalsContact C-N 3.33Å; P40-M42 PolarHBondContact O-N 3.45Å
41P62.9Low56.4Low131 Ų131110.9 Ų110.985%0.85166%0.656SS**  trans-57.999.2-178.223.6-32.5000108.7T43P41-T43 PolarHBondContact O-N 3.44Å
42M58.8Low57Low150 Ų150105 Ų10574%0.73963%0.629SS**  trans-68.8118.8174.754179.1-174.800106.6P40 A44P40-M42 VanDerWaalsContact C-N 3.33Å; P40-M42 PolarHBondContact O-N 3.45Å; M42-A44 VanDerWaalsContact C-N 3.26Å; M42-A44 PolarHBondContact O-N 3.17Å
43T60.7Low57.8Low137 Ų137101.2 Ų101.284%0.8462%0.619SS**  trans-63.499.3162.1-14.20000105.3P41 V45P41-T43 PolarHBondContact O-N 3.44Å; T43-V45 PolarHBondContact O-N 2.96Å
44A57.3Low58.5Low77 Ų7796.6 Ų96.664%0.63661%0.605SS**  trans-65.591.3171.300000106.4M42 V46M42-A44 VanDerWaalsContact C-N 3.26Å; M42-A44 PolarHBondContact O-N 3.17Å; A44-V46 VanDerWaalsContact C-N 3.34Å; A44-V46 PolarHBondContact O-N 3.18Å
45V56.6Low59.5Low114 Ų11498 Ų9869%0.69160%0.6SS**  trans-58.8112.6156.8-177.60000103.2T43 T47T43-V45 PolarHBondContact O-N 2.96Å; V45-T47 VanDerWaalsContact CG1-OG1 3.25Å; V45-T47 WeakPolarHBondContact CG1-OG1 3.49Å; V45-T47 PolarHBondContact O-N 3.4Å
46V54.7Low61Low131 Ų13198.3 Ų98.379%0.79459%0.593SS**  trans-7063.3169.8-172.70000106.6A44 V48A44-V46 VanDerWaalsContact C-N 3.34Å; A44-V46 PolarHBondContact O-N 3.18Å; V46-V48 PolarHBondContact O-N 3.36Å
47T53.6Low62.3Low81 Ų8194 Ų9450%0.49757%0.571SS.*  trans-69.8124157.1-46.80000102.9V45 I49V45-T47 VanDerWaalsContact CG1-OG1 3.25Å; V45-T47 WeakPolarHBondContact CG1-OG1 3.49Å; V45-T47 PolarHBondContact O-N 3.4Å; T47-I49 HydrophobicContact CG2-CD1 3.82Å; T47-I49 HydrophobicContact CG2-CG1 3.43Å; T47-I49 VanDerWaalsContact CG2-CG1 3.43Å; T47-I49 PolarHBondContact O-N 3.28Å
48V56.6Low63.8Low138 Ų13894.9 Ų94.984%0.83657%0.567SS**  trans-68.461.6171-171.50000107.4V46V46-V48 PolarHBondContact O-N 3.36Å
49I57.2Low65.1Low77 Ų7789.5 Ų89.540%0.39553%0.532SS..PPolyproline II helixtrans-83.1116.6167.8-56.7168.4000102.3T47 F52 V59T47-I49 HydrophobicContact CG2-CD1 3.82Å; T47-I49 HydrophobicContact CG2-CG1 3.43Å; T47-I49 VanDerWaalsContact CG2-CG1 3.43Å; T47-I49 PolarHBondContact O-N 3.28Å; I49-F52 HydrophobicContact CG2-CD2 4.13Å; I49-F52 HydrophobicContact CG2-CE1 4.34Å; I49-F52 HydrophobicContact CG2-CE2 3.49Å; I49-F52 VanDerWaalsContact CG2-CE2 3.49Å; I49-F52 HydrophobicContact CG2-CZ 3.61Å; I49-V59 HydrophobicContact CG2-CG1 4Å
50P58.6Low66.4Low49 Ų4989.5 Ų89.532%0.31853%0.532SS..PPolyproline II helixtrans-49.9130.6171.523.5-35.2000107.4F52 V57 V59P50-F52 PolarHBondContact O-N 2.73Å; P50-V57 HydrophobicContact CB-CG2 3.55Å; P50-V57 HydrophobicContact CG-CG2 3.22Å; P50-V59 HydrophobicContact CG-CG1 3.85Å
51P64.1Low67.7Low119 Ų11984.5 Ų84.577%0.77350%0.499SS*.PPolyproline II helixtrans-50.7119.6-172.720.3-32.2000108.5G53P51-G53 PolarHBondContact O-N 2.96Å
52F68.4Low68.7Low46 Ų4684.3 Ų84.320%0.20250%0.501CS..  trans-57.2109.3174.4-70.4-71000106.5I49 P50 V57 V59 T70 H111 L120 Y123I49-F52 HydrophobicContact CG2-CD2 4.13Å; I49-F52 HydrophobicContact CG2-CE1 4.34Å; I49-F52 HydrophobicContact CG2-CE2 3.49Å; I49-F52 VanDerWaalsContact CG2-CE2 3.49Å; I49-F52 HydrophobicContact CG2-CZ 3.61Å; P50-F52 PolarHBondContact O-N 2.73Å; F52-V57 HydrophobicContact CD1-CG1 3.71Å; F52-V57 HydrophobicContact CE1-CG1 3.97Å; F52-V59 HydrophobicContact CE1-CG1 4.09Å; F52-V59 HydrophobicContact CE1-CG2 4.37Å; F52-V59 HydrophobicContact CZ-CG1 4.38Å; F52-T70 HydrophobicContact CE1-CG2 4.33Å; F52-H111 HydrophobicContact CD1-CB 4.15Å; F52-H111 AromaticContact CD1-CD2 3.89Å; F52-H111 AromaticContact CD1-CG 3.75Å; F52-H111 AromaticContact CD1-ND1 3.97Å; F52-H111 HydrophobicContact CE1-CB 4.29Å; F52-L120 HydrophobicContact CE1-CB 4.2Å; F52-L120 HydrophobicContact CZ-CB 3.98Å; F52-Y123 WeakPolarHBondContact O-CD2 3.37Å
53G72Confident70Confident21 Ų2182.5 Ų82.522%0.21649%0.494CS..  trans-108.5-160.5-173.800000111.4P51 D55 H111 Y123P51-G53 PolarHBondContact O-N 2.96Å; G53-D55 PolarHBondContact O-N 2.87Å; G53-H111 PolarHBondContact O-NE2 3.01Å; G53-H111 VanDerWaalsContact O-NE2 3.17Å; G53-Y123 VanDerWaalsContact C-CD1 3.49Å; G53-Y123 WeakPolarHBondContact O-CD1 3.23Å
54A68.2Low71.3Confident32 Ų3278 Ų7826%0.26447%0.468SS..SBendtrans-62.8-26.1170.600000113.5I109A54-I109 VanDerWaalsContact O-CD1 3.25Å; A54-I109 WeakPolarHBondContact O-CD1 3.39Å
55D77.1Confident72.6Confident118 Ų11876.4 Ų76.463%0.63146%0.459SS*.SBendtrans-108.3150-166-62.1-57.8000111.2G53 V57 H111G53-D55 PolarHBondContact O-N 2.87Å; D55-V57 PolarHBondContact O-N 3.38Å; D55-H111 PolarHBondContact O-CE1 3.21Å
56P80.1Confident74Confident59 Ų5973 Ų7338%0.38344%0.44SS..  trans-60.5135.517528-35.5000110.1L69 T70 V72P56-L69 HydrophobicContact CB-CD1 4.01Å; P56-L69 HydrophobicContact CB-CG 4.17Å; P56-T70 WeakPolarHBondContact CB-O 3.04Å; P56-V72 HydrophobicContact CB-CG1 4.16Å; P56-V72 HydrophobicContact CB-CG2 4.41Å
57V79.8Confident75.6Confident25 Ų2573.7 Ų73.715%0.15244%0.437CS..  trans-124.4144.4-172660000111.2P50 F52 D55 V59 T70P50-V57 HydrophobicContact CB-CG2 3.55Å; P50-V57 HydrophobicContact CG-CG2 3.22Å; F52-V57 HydrophobicContact CD1-CG1 3.71Å; F52-V57 HydrophobicContact CE1-CG1 3.97Å; D55-V57 PolarHBondContact O-N 3.38Å; V57-V59 HydrophobicContact CG1-CG1 3.8Å; V57-V59 HydrophobicContact CG2-CG1 4.4Å; V57-V59 PolarHBondContact O-N 3.04Å; V57-T70 HydrophobicContact CG1-CG2 4.36Å; V57-T70 PolarHBondContact N-OG1 3.13Å; V57-T70 VanDerWaalsContact N-OG1 3.13Å; V57-T70 PolarHBondContact O-N 3.34Å; V57-T70 PolarHBondContact O-OG1 2.95Å
58H85.6Confident77.2Confident116 Ų11670.7 Ų70.754%0.53742%0.418SS..EExtended strand (participates in β ladder)trans-76.8114.1174.5-79.7-82.1000109.8M67H58-M67 HydrophobicContact CB-CE 4.28Å
59V81.1Confident78.7Confident10 Ų1067.9 Ų67.96%0.06140%0.398CS..EExtended strand (participates in β ladder)trans-138.9150.7179.9-64.50000109.7I49 P50 F52 V57 V68 T70 L120I49-V59 HydrophobicContact CG2-CG1 4Å; P50-V59 HydrophobicContact CG-CG1 3.85Å; F52-V59 HydrophobicContact CE1-CG1 4.09Å; F52-V59 HydrophobicContact CE1-CG2 4.37Å; F52-V59 HydrophobicContact CZ-CG1 4.38Å; V57-V59 HydrophobicContact CG1-CG1 3.8Å; V57-V59 HydrophobicContact CG2-CG1 4.4Å; V57-V59 PolarHBondContact O-N 3.04Å; V59-V68 PolarHBondContact N-O 3.35Å; V59-V68 PolarHBondContact O-N 2.99Å; V59-T70 HydrophobicContact CG2-CG2 3.35Å; V59-L120 HydrophobicContact CB-CD2 4.44Å; V59-L120 HydrophobicContact CG2-CD2 3.31Å
60Q84.8Confident80.2Confident144 Ų14464.3 Ų64.367%0.67338%0.38SS*.EExtended strand (participates in β ladder)trans-84.4117.4171.9-169.3175.8-10.900108.6S62 G65Q60-S62 PolarHBondContact O-N 3.31Å; Q60-G65 WeakPolarHBondContact CG-O 3.32Å; Q60-G65 PolarHBondContact NE2-O 2.87Å
61C84.1Confident81.5Confident0 Ų066.7 Ų66.70%039%0.387CS..  trans-74.3129.2179.9175.60000110N63 C64 G65 S66 V68 L120C61-N63 PolarHBondContact O-N 3.34Å; C61-C64 WeakPolarHBondContact CB-SG 3.39Å; C61-G65 VanDerWaalsContact O-CA 3.23Å; C61-G65 WeakPolarHBondContact O-CA 3.45Å; C61-G65 PolarHBondContact O-N 2.9Å; C61-S66 PolarHBondContact N-O 3.45Å; C61-V68 HydrophobicContact CB-CG2 4.05Å; C61-L120 HydrophobicContact CB-CD2 4.34Å
62S83.3Confident82.4Confident127 Ų12763.5 Ų63.589%0.88837%0.365SS*.THydrogen-bonded Turntrans-66-24.4179.652.60000113.8Q60Q60-S62 PolarHBondContact O-N 3.31Å
63N85.9Confident83Confident111 Ų11165.9 Ų65.959%0.59438%0.375SS*.THydrogen-bonded Turntrans-83.9-42.8-178.8-169.126.4000112.5C61 T118C61-N63 PolarHBondContact O-N 3.34Å; N63-T118 HydrophobicContact CB-CG2 4.31Å
64C88.3Confident83.1Confident43 Ų4368.7 Ų68.729%0.29139%0.389SS..THydrogen-bonded Turntrans-102.2-7.7-17960.80000114.4C61 S66 C113C61-C64 WeakPolarHBondContact CB-SG 3.39Å; C64-S66 PolarHBondContact O-N 3.1Å; C64-S66 PolarHBondContact O-OG 2.95Å; C64-S66 PolarHBondContact SG-OG 3.06Å; C64-C113 VanDerWaalsContact SG-SG 3.62Å
65G85.5Confident83.3Confident43 Ų4369.7 Ų69.744%0.44339%0.392SS..  trans66.4-9.1178.900000115.6Q60 C61Q60-G65 WeakPolarHBondContact CG-O 3.32Å; Q60-G65 PolarHBondContact NE2-O 2.87Å; C61-G65 VanDerWaalsContact O-CA 3.23Å; C61-G65 WeakPolarHBondContact O-CA 3.45Å; C61-G65 PolarHBondContact O-N 2.9Å
66S84.5Confident82.8Confident42 Ų4266.2 Ų66.229%0.29438%0.38SS..SBendtrans-85.5145.5-17933.30000111.8C61 C64 V68C61-S66 PolarHBondContact N-O 3.45Å; C64-S66 PolarHBondContact O-N 3.1Å; C64-S66 PolarHBondContact O-OG 2.95Å; C64-S66 PolarHBondContact SG-OG 3.06Å; S66-V68 PolarHBondContact O-N 3.08Å
67M88.8Confident82.1Confident147 Ų14763.8 Ų63.872%0.72437%0.366SS*.EExtended strand (participates in β ladder)trans-73.9116.4171.5-166.7173.2-158.300108.7H58H58-M67 HydrophobicContact CB-CE 4.28Å
68V86.4Confident81.3Confident17 Ų1766.9 Ų66.910%0.10339%0.385CS..EExtended strand (participates in β ladder)trans-129.9150.1-175.1-65.70000110V59 C61 S66 P114V59-V68 PolarHBondContact N-O 3.35Å; V59-V68 PolarHBondContact O-N 2.99Å; C61-V68 HydrophobicContact CB-CG2 4.05Å; S66-V68 PolarHBondContact O-N 3.08Å; V68-P114 HydrophobicContact CB-CG 3.99Å; V68-P114 HydrophobicContact CG1-CG 4.35Å
69L89.7Confident80.2Confident79 Ų7963.8 Ų63.841%0.41437%0.372SS..EExtended strand (participates in β ladder)trans-82.9120.6166.1-175.762.6000107.4P56 P114P56-L69 HydrophobicContact CB-CD1 4.01Å; P56-L69 HydrophobicContact CB-CG 4.17Å; L69-P114 VanDerWaalsContact O-CD 3.31Å; L69-P114 WeakPolarHBondContact O-CD 3.37Å; L69-P114 WeakPolarHBondContact O-CG 3.47Å
70T87.1Confident79.4Confident2 Ų263.6 Ų63.61%0.01237%0.371CS..PPolyproline II helixtrans-63.7139.3179.859.60000111F52 P56 V57 V59 H111 H112 L120F52-T70 HydrophobicContact CE1-CG2 4.33Å; P56-T70 WeakPolarHBondContact CB-O 3.04Å; V57-T70 HydrophobicContact CG1-CG2 4.36Å; V57-T70 PolarHBondContact N-OG1 3.13Å; V57-T70 VanDerWaalsContact N-OG1 3.13Å; V57-T70 PolarHBondContact O-N 3.34Å; V57-T70 PolarHBondContact O-OG1 2.95Å; V59-T70 HydrophobicContact CG2-CG2 3.35Å; T70-H111 HydrophobicContact CG2-CB 4.07Å; T70-H111 PolarHBondContact OG1-ND1 3.04Å; T70-H112 CarbonylContact C-O 3.59Å; T70-H112 WeakPolarHBondContact CA-O 3.5Å; T70-L120 HydrophobicContact CG2-CD1 4.35Å; T70-L120 HydrophobicContact CG2-CD2 4.08Å
71E86.4Confident78.5Confident100 Ų10065.3 Ų65.347%0.46737%0.371SS..EExtended strand (participates in β ladder)trans-80.4123.1165-70.2-169.9166.300109.8H111 H112 P114E71-H111 WeakPolarHBondContact O-CA 3.44Å; E71-H112 PolarHBondContact N-O 3.49Å; E71-H112 PolarHBondContact O-N 3.21Å; E71-P114 HydrophobicContact CG-CB 4.21Å
72V84Confident77.7Confident52 Ų5267.8 Ų67.832%0.31539%0.387SS..EExtended strand (participates in β ladder)trans-86.3125174.1-72.60000110P56 I109 E110 H111P56-V72 HydrophobicContact CB-CG1 4.16Å; P56-V72 HydrophobicContact CB-CG2 4.41Å; V72-I109 HydrophobicContact CB-CG2 3.61Å; V72-I109 HydrophobicContact CG1-CG2 3.6Å; V72-E110 CarbonylContact C-O 3.58Å; V72-E110 WeakPolarHBondContact CA-O 3.45Å; V72-H111 WeakPolarHBondContact CG1-CE1 3.1Å
73K80.5Confident76.8Confident96 Ų9664.3 Ų64.342%0.41736%0.358SS..EExtended strand (participates in β ladder)trans-114.6119.9173.6-70-173.8179.5170.50109.6V75 E110K73-V75 PolarHBondContact O-N 3.3Å; K73-E110 PolarHBondContact N-O 2.84Å; K73-E110 PolarHBondContact O-N 2.82Å
74P74.7Confident75.7Confident79 Ų7961.1 Ų61.151%0.51334%0.344SS..EExtended strand (participates in β ladder)trans-69.3128.217229.5-32.5000108.7Q107 D108P74-Q107 HydrophobicContact CB-CB 4.38Å; P74-D108 WeakPolarHBondContact CA-O 3.25Å
75V71.2Confident74.8Confident54 Ų5464.5 Ų64.533%0.32736%0.356SS..EExtended strand (participates in β ladder)trans-115.7132.4176.4-1790000108.5K73 G77 Q107 D108 E110K73-V75 PolarHBondContact O-N 3.3Å; V75-G77 PolarHBondContact O-N 3.08Å; V75-Q107 WeakPolarHBondContact O-CB 3.39Å; V75-D108 PolarHBondContact N-O 3.38Å; V75-D108 PolarHBondContact O-N 3.05Å; V75-E110 HydrophobicContact CB-CG 4.37Å; V75-E110 HydrophobicContact CG2-CB 4.22Å; V75-E110 HydrophobicContact CG2-CG 3.53Å
76A66.8Low73.9Confident44 Ų4465 Ų6536%0.36435%0.351SS..  trans-62.899.3177.100000109.7S80A76-S80 WeakPolarHBondContact CA-OG 3.45Å
77G65.4Low73Confident9 Ų963.4 Ų63.49%0.09334%0.34CS..  trans-71.5-178.2175.800000111.9V75 L79 S80 D108V75-G77 PolarHBondContact O-N 3.08Å; G77-L79 PolarHBondContact O-N 3.06Å; G77-L79 VanDerWaalsContact O-N 3.13Å; G77-S80 WeakPolarHBondContact O-CB 3.46Å; G77-S80 PolarHBondContact O-N 3.31Å; G77-S80 PolarHBondContact O-OG 3.12Å; G77-D108 WeakPolarHBondContact CA-OD2 3.49Å
78T62.4Low71.9Confident90 Ų9059.6 Ų59.655%0.55233%0.332SS*.Hα-helixtrans-54-32.2174.749.80000112.3S80 W81 V82T78-S80 VanDerWaalsContact C-N 3.34Å; T78-S80 PolarHBondContact O-N 3.21Å; T78-W81 WeakPolarHBondContact O-CB 3.38Å; T78-W81 PolarHBondContact O-N 3.39Å; T78-V82 WeakPolarHBondContact O-CG2 3.46Å; T78-V82 PolarHBondContact O-N 3.08Å
79L63.9Low70.9Confident50 Ų5063.3 Ų63.326%0.26235%0.35SS..Hα-helixtrans-60.7-37.8177-67.8172.1000113.6G77 W81 V82 L83 L106 M126G77-L79 PolarHBondContact O-N 3.06Å; G77-L79 VanDerWaalsContact O-N 3.13Å; L79-W81 VanDerWaalsContact C-N 3.26Å; L79-W81 PolarHBondContact O-N 3.38Å; L79-V82 PolarHBondContact O-N 3.03Å; L79-L83 PolarHBondContact O-N 3.27Å; L79-L106 HydrophobicContact CD1-CB 4.3Å; L79-L106 HydrophobicContact CD1-CD2 3.98Å; L79-L106 WeakPolarHBondContact CD1-O 3.46Å; L79-M126 HydrophobicContact CD1-CE 4.17Å; L79-M126 HydrophobicContact CD1-CG 4.37Å; L79-M126 HydrophobicContact CD1-SD 3.6Å; L79-M126 VanDerWaalsContact CD1-SD 3.6Å; L79-M126 HydrophobicContact CD2-SD 4.38Å
80S64.2Low69.9Low6 Ų664.4 Ų64.44%0.04235%0.352CS..Hα-helixtrans-59.8-43177.9-48.50000110.6A76 G77 T78 C84A76-S80 WeakPolarHBondContact CA-OG 3.45Å; G77-S80 WeakPolarHBondContact O-CB 3.46Å; G77-S80 PolarHBondContact O-N 3.31Å; G77-S80 PolarHBondContact O-OG 3.12Å; T78-S80 VanDerWaalsContact C-N 3.34Å; T78-S80 PolarHBondContact O-N 3.21Å; S80-C84 PolarHBondContact O-N 2.73Å; S80-C84 VanDerWaalsContact O-N 3.08Å; S80-C84 PolarHBondContact O-SG 3.36Å
81W66Low68.6Low180 Ų18067 Ų6768%0.68238%0.379SS*.Hα-helixtrans-66.8-41.4176.2-73.485.4000112.5T78 L79 C84 M85T78-W81 WeakPolarHBondContact O-CB 3.38Å; T78-W81 PolarHBondContact O-N 3.39Å; L79-W81 VanDerWaalsContact C-N 3.26Å; L79-W81 PolarHBondContact O-N 3.38Å; W81-C84 PolarHBondContact O-N 2.79Å; W81-M85 WeakPolarHBondContact O-CG 3.36Å; W81-M85 PolarHBondContact O-N 3.03Å
82V66.9Low67.1Low53 Ų5366.8 Ų66.832%0.32138%0.381SS..Hα-helixtrans-61.3-45.8177.6172.20000111.2T78 L79 M85 T86T78-V82 WeakPolarHBondContact O-CG2 3.46Å; T78-V82 PolarHBondContact O-N 3.08Å; L79-V82 PolarHBondContact O-N 3.03Å; V82-M85 PolarHBondContact O-N 3.17Å; V82-T86 WeakPolarHBondContact O-CB 3.35Å; V82-T86 PolarHBondContact O-N 3.21Å; V82-T86 PolarHBondContact O-OG1 3.42Å
83L65.4Low65.8Low54 Ų5473 Ų7328%0.28340%0.404SS..Hα-helixtrans-64.6-41.6177.5-74172.6000111.4L79 T86 C87 P100L79-L83 PolarHBondContact O-N 3.27Å; L83-T86 PolarHBondContact O-N 3.26Å; L83-C87 WeakPolarHBondContact O-CB 3.44Å; L83-C87 PolarHBondContact O-N 2.9Å; L83-C87 PolarHBondContact O-SG 3.22Å; L83-P100 HydrophobicContact CB-CB 3.74Å; L83-P100 HydrophobicContact CB-CG 3.74Å; L83-P100 HydrophobicContact CD1-CB 3.65Å; L83-P100 HydrophobicContact CD1-CG 4.31Å; L83-P100 HydrophobicContact CG-CB 4.33Å
84C62.5Low64.5Low44 Ų4478.8 Ų78.830%0.29743%0.429SS..Hα-helixtrans-59.4-48.4174.1-75.10000112.3S80 W81 T86 C87 A88S80-C84 PolarHBondContact O-N 2.73Å; S80-C84 VanDerWaalsContact O-N 3.08Å; S80-C84 PolarHBondContact O-SG 3.36Å; W81-C84 PolarHBondContact O-N 2.79Å; C84-T86 VanDerWaalsContact C-N 3.32Å; C84-T86 PolarHBondContact O-N 2.9Å; C84-C87 PolarHBondContact O-N 2.88Å; C84-A88 WeakPolarHBondContact O-CB 3.43Å; C84-A88 PolarHBondContact O-N 3.09Å
85M68.4Low63.5Low113 Ų11377.4 Ų77.456%0.55743%0.43SS*.Hα-helixtrans-61.1-42.5177-77.4-66.9-165.700111.8W81 V82 A88 L89W81-M85 WeakPolarHBondContact O-CG 3.36Å; W81-M85 PolarHBondContact O-N 3.03Å; V82-M85 PolarHBondContact O-N 3.17Å; M85-A88 PolarHBondContact O-N 3.01Å; M85-L89 WeakPolarHBondContact O-CB 3.25Å; M85-L89 WeakPolarHBondContact O-CG 3.38Å; M85-L89 PolarHBondContact O-N 3.48Å
86T67.8Low62.6Low54 Ų5476.7 Ų76.733%0.33143%0.426SS..Hα-helixtrans-60.8-49.5176.7-58.30000110.3V82 L83 C84 A88 L89 F90V82-T86 WeakPolarHBondContact O-CB 3.35Å; V82-T86 PolarHBondContact O-N 3.21Å; V82-T86 PolarHBondContact O-OG1 3.42Å; L83-T86 PolarHBondContact O-N 3.26Å; C84-T86 VanDerWaalsContact C-N 3.32Å; C84-T86 PolarHBondContact O-N 2.9Å; T86-A88 VanDerWaalsContact C-N 3.3Å; T86-A88 PolarHBondContact O-N 3.23Å; T86-L89 PolarHBondContact O-N 2.76Å; T86-F90 HydrophobicContact CG2-CD2 3.62Å; T86-F90 HydrophobicContact CG2-CE2 3.69Å; T86-F90 VanDerWaalsContact O-CD2 3.26Å; T86-F90 WeakPolarHBondContact O-CD2 3.26Å; T86-F90 PolarHBondContact O-N 2.96Å
87C64.8Low61.8Low8 Ų877.3 Ų77.35%0.05443%0.428CS..Hα-helixtrans-60.1-40.6179-65.40000112.4L83 C84 G91 L92 C96 C97L83-C87 WeakPolarHBondContact O-CB 3.44Å; L83-C87 PolarHBondContact O-N 2.9Å; L83-C87 PolarHBondContact O-SG 3.22Å; C84-C87 PolarHBondContact O-N 2.88Å; C87-G91 PolarHBondContact O-N 2.79Å; C87-L92 PolarHBondContact O-N 2.91Å; C87-C96 HydrophobicContact CB-CB 4.39Å; C87-C96 WeakPolarHBondContact SG-CB 3.44Å; C87-C97 VanDerWaalsContact CB-SG 3.57Å
88A65.4Low61.2Low68 Ų6882.4 Ų82.456%0.56245%0.452SS*.Hα-helixtrans-63.6-43.217600000112.3C84 M85 T86 G91C84-A88 WeakPolarHBondContact O-CB 3.43Å; C84-A88 PolarHBondContact O-N 3.09Å; M85-A88 PolarHBondContact O-N 3.01Å; T86-A88 VanDerWaalsContact C-N 3.3Å; T86-A88 PolarHBondContact O-N 3.23Å; A88-G91 PolarHBondContact O-N 3Å
89L65.5Low60.9Low94 Ų9481.8 Ų81.849%0.49245%0.445SS..Hα-helixtrans-68.2-38179.9-75.3170.2000113.3L21 M85 T86 G91L21-L89 HydrophobicContact CD2-CD2 4.45Å; M85-L89 WeakPolarHBondContact O-CB 3.25Å; M85-L89 WeakPolarHBondContact O-CG 3.38Å; M85-L89 PolarHBondContact O-N 3.48Å; T86-L89 PolarHBondContact O-N 2.76Å; L89-G91 PolarHBondContact O-N 3.43Å
90F67.9Low60.3Low103 Ų10379.5 Ų79.545%0.45243%0.433SS..THydrogen-bonded Turntrans-78.8-2.1-179.8-79.7-83000113.3I25 T86 L92I25-F90 HydrophobicContact CD1-CE2 3.88Å; I25-F90 HydrophobicContact CD1-CZ 3.76Å; T86-F90 HydrophobicContact CG2-CD2 3.62Å; T86-F90 HydrophobicContact CG2-CE2 3.69Å; T86-F90 VanDerWaalsContact O-CD2 3.26Å; T86-F90 WeakPolarHBondContact O-CD2 3.26Å; T86-F90 PolarHBondContact O-N 2.96Å; F90-L92 HydrophobicContact CB-CD1 3.51Å; F90-L92 PolarHBondContact O-N 2.81Å
91G61.5Low59.8Low56 Ų5685.3 Ų85.358%0.57746%0.457SS*.THydrogen-bonded Turntrans6715.5-179.500000113.6C87 A88 L89 F93C87-G91 PolarHBondContact O-N 2.79Å; A88-G91 PolarHBondContact O-N 3Å; L89-G91 PolarHBondContact O-N 3.43Å; G91-F93 PolarHBondContact O-N 2.66Å
92L54Low59.1Low95 Ų9580.9 Ų80.950%0.49745%0.453SS..  trans-80.471.8175.1-8395.3000109.9C87 F90 F94 C96C87-L92 PolarHBondContact O-N 2.91Å; F90-L92 HydrophobicContact CB-CD1 3.51Å; F90-L92 PolarHBondContact O-N 2.81Å; L92-F94 PolarHBondContact O-N 3.33Å; L92-C96 HydrophobicContact CB-CB 4.35Å; L92-C96 HydrophobicContact CD2-CB 4.4Å
93F56.4Low58.6Low184 Ų18480.7 Ų80.781%0.80745%0.452SS*.THydrogen-bonded Turntrans-67.9-16.5177.2-122.9-94.6000113.4G91G91-F93 PolarHBondContact O-N 2.66Å
94F52.9Low58.1Low216 Ų21681.4 Ų81.495%0.94746%0.46SS*.THydrogen-bonded Turntrans-107.613.2-163.2-96.7-79.8000117.6L92L92-F94 PolarHBondContact O-N 3.33Å
95G55.3Low57.8Low51 Ų5183.2 Ų83.253%0.52647%0.473SS..THydrogen-bonded Turntrans177.8-10.3170.900000119.1
96C51.9Low57.1Low38 Ų3880.6 Ų80.626%0.25746%0.461SS..SBendtrans-93.9-21.4-169.6-147.50000113.5C87 L92 L98 I99 P100C87-C96 HydrophobicContact CB-CB 4.39Å; C87-C96 WeakPolarHBondContact SG-CB 3.44Å; L92-C96 HydrophobicContact CB-CB 4.35Å; L92-C96 HydrophobicContact CD2-CB 4.4Å; C96-L98 PolarHBondContact O-N 2.99Å; C96-L98 VanDerWaalsContact O-N 3.1Å; C96-I99 HydrophobicContact CB-CD1 4.46Å; C96-I99 WeakPolarHBondContact O-CB 3.36Å; C96-I99 WeakPolarHBondContact O-CG1 3.48Å; C96-I99 PolarHBondContact O-N 3.17Å; C96-I99 WeakPolarHBondContact SG-CD1 2.95Å; C96-P100 WeakPolarHBondContact O-CD 3.5Å
97C50.2Low56.9Low58 Ų5878.8 Ų78.839%0.39245%0.449SS..THydrogen-bonded Turntrans-63.8-16.6178.9-62.80000114.3C87 P100C87-C97 VanDerWaalsContact CB-SG 3.57Å; C97-P100 WeakPolarHBondContact O-CD 3.5Å; C97-P100 WeakPolarHBondContact O-CG 2.93Å
98L51.6Low57Low116 Ų11680 Ų8061%0.60746%0.455SS*.THydrogen-bonded Turntrans-84.8-21.9176-76.7141.1000112.8C96 F101 C102C96-L98 PolarHBondContact O-N 2.99Å; C96-L98 VanDerWaalsContact O-N 3.1Å; L98-F101 CarbonylContact O-C 3.53Å; L98-F101 PolarHBondContact O-N 2.97Å; L98-C102 WeakPolarHBondContact O-CB 3.42Å; L98-C102 PolarHBondContact O-N 2.71Å; L98-C102 PolarHBondContact O-SG 2.86Å
99I56.7Low57.6Low77 Ų7777.3 Ų77.340%0.39543%0.431SS..Hα-helixtrans-57.1-44.9-179.6-54.8-176.1000112.9C96 F101 C102 V103C96-I99 HydrophobicContact CB-CD1 4.46Å; C96-I99 WeakPolarHBondContact O-CB 3.36Å; C96-I99 WeakPolarHBondContact O-CG1 3.48Å; C96-I99 PolarHBondContact O-N 3.17Å; C96-I99 WeakPolarHBondContact SG-CD1 2.95Å; I99-F101 PolarHBondContact O-N 2.85Å; I99-C102 PolarHBondContact O-N 2.82Å; I99-C102 VanDerWaalsContact O-N 3.17Å; I99-V103 HydrophobicContact CG2-CG2 3.94Å; I99-V103 WeakPolarHBondContact O-CG2 3.46Å; I99-V103 PolarHBondContact O-N 2.89Å
100P51.9Low58.5Low2 Ų275.6 Ų75.61%0.01342%0.42CS..Hα-helixtrans-58.7-31.5175.515.2-27000113.8L83 C96 C97 Q107L83-P100 HydrophobicContact CB-CB 3.74Å; L83-P100 HydrophobicContact CB-CG 3.74Å; L83-P100 HydrophobicContact CD1-CB 3.65Å; L83-P100 HydrophobicContact CD1-CG 4.31Å; L83-P100 HydrophobicContact CG-CB 4.33Å; C96-P100 WeakPolarHBondContact O-CD 3.5Å; C97-P100 WeakPolarHBondContact O-CD 3.5Å; C97-P100 WeakPolarHBondContact O-CG 2.93Å; P100-Q107 PolarHBondContact O-NE2 2.95Å
101F54Low59.2Low127 Ų12770.7 Ų70.756%0.55740%0.399SS*.Hα-helixtrans-85.4-28.9178.5-70.7-78.6000112.6L98 I99 Q107L98-F101 CarbonylContact O-C 3.53Å; L98-F101 PolarHBondContact O-N 2.97Å; I99-F101 PolarHBondContact O-N 2.85Å; F101-Q107 PolarHBondContact O-NE2 3.42Å
102C50.7Low60.4Low88 Ų8869.3 Ų69.360%0.59538%0.377SS*.Hα-helixtrans-83.7-16.9-179.4-70.50000114L98 I99 P104L98-C102 WeakPolarHBondContact O-CB 3.42Å; L98-C102 PolarHBondContact O-N 2.71Å; L98-C102 PolarHBondContact O-SG 2.86Å; I99-C102 PolarHBondContact O-N 2.82Å; I99-C102 VanDerWaalsContact O-N 3.17Å; C102-P104 WeakPolarHBondContact O-CD 3.39Å
103V55.5Low62.1Low48 Ų4864.8 Ų64.829%0.29135%0.353SS..  trans-104.982.6177.8-171.40000109.8I99 S105 L106I99-V103 HydrophobicContact CG2-CG2 3.94Å; I99-V103 WeakPolarHBondContact O-CG2 3.46Å; I99-V103 PolarHBondContact O-N 2.89Å; V103-S105 PolarHBondContact O-N 3.42Å; V103-S105 VanDerWaalsContact O-N 3.08Å; V103-L106 HydrophobicContact CB-CD1 3.89Å; V103-L106 HydrophobicContact CG1-CB 4.39Å; V103-L106 HydrophobicContact CG1-CD1 3.58Å; V103-L106 HydrophobicContact CG1-CG 3.98Å; V103-L106 PolarHBondContact O-N 3.45Å; V103-L106 VanDerWaalsContact O-N 3.12Å
104P55.2Low63.7Low70 Ų7058.6 Ų58.646%0.45533%0.332SS..G310 helixtrans-62.3-15.3175.726.7-35.1000112.5C102 L106 Q107 R125C102-P104 WeakPolarHBondContact O-CD 3.39Å; P104-L106 PolarHBondContact O-N 3.13Å; P104-Q107 PolarHBondContact O-N 3.42Å; P104-R125 PolarHBondContact O-NH1 2.88Å
105S56.5Low65.4Low82 Ų8253.5 Ų53.557%0.57331%0.314SS*.G310 helixtrans-66.1-22.9174.7-49.60000113.7V103 R125V103-S105 PolarHBondContact O-N 3.42Å; V103-S105 VanDerWaalsContact O-N 3.08Å; S105-R125 VanDerWaalsContact O-CD 3.25Å; S105-R125 WeakPolarHBondContact O-CD 3.25Å
106L53.2Low67.1Low58 Ų5853 Ų5330%0.30430%0.303SS..G310 helixtrans-94.9-4.9176.9-73.5154.3000112.5L79 V103 P104 M126L79-L106 HydrophobicContact CD1-CB 4.3Å; L79-L106 HydrophobicContact CD1-CD2 3.98Å; L79-L106 WeakPolarHBondContact CD1-O 3.46Å; V103-L106 HydrophobicContact CB-CD1 3.89Å; V103-L106 HydrophobicContact CG1-CB 4.39Å; V103-L106 HydrophobicContact CG1-CD1 3.58Å; V103-L106 HydrophobicContact CG1-CG 3.98Å; V103-L106 PolarHBondContact O-N 3.45Å; V103-L106 VanDerWaalsContact O-N 3.12Å; P104-L106 PolarHBondContact O-N 3.13Å; L106-M126 HydrophobicContact CD2-CE 3.73Å
107Q62.9Low68.8Low15 Ų1559 Ų597%0.0732%0.324CS..SBendtrans-93.5146.7-178.6-67.6177.742.600110P74 V75 P100 F101 P104 R125P74-Q107 HydrophobicContact CB-CB 4.38Å; V75-Q107 WeakPolarHBondContact O-CB 3.39Å; P100-Q107 PolarHBondContact O-NE2 2.95Å; F101-Q107 PolarHBondContact O-NE2 3.42Å; P104-Q107 PolarHBondContact O-N 3.42Å; Q107-R125 PolarHBondContact O-NH1 3.45Å; Q107-R125 VanDerWaalsContact O-NH1 3.09Å
108D68.5Low70.5Confident33 Ų3358.6 Ų58.618%0.17632%0.32CS..EExtended strand (participates in β ladder)trans-70.7151.6172.8-63-49.3000108.9P74 V75 G77 R124P74-D108 WeakPolarHBondContact CA-O 3.25Å; V75-D108 PolarHBondContact N-O 3.38Å; V75-D108 PolarHBondContact O-N 3.05Å; G77-D108 WeakPolarHBondContact CA-OD2 3.49Å; D108-R124 VanDerWaalsContact OD1-CA 3.26Å; D108-R124 WeakPolarHBondContact OD1-CA 3.46Å
109I77.4Confident72Confident12 Ų1257 Ų576%0.06231%0.312CS..EExtended strand (participates in β ladder)trans-117.6127.5-177.3-67.6177.9000109.8A54 V72 T122 Y123 R125A54-I109 VanDerWaalsContact O-CD1 3.25Å; A54-I109 WeakPolarHBondContact O-CD1 3.39Å; V72-I109 HydrophobicContact CB-CG2 3.61Å; V72-I109 HydrophobicContact CG1-CG2 3.6Å; I109-T122 CarbonylContact O-C 3.55Å; I109-T122 WeakPolarHBondContact O-CA 3.39Å; I109-Y123 PolarHBondContact N-O 2.93Å; I109-Y123 PolarHBondContact O-N 3.27Å; I109-R125 VanDerWaalsContact CD1-CZ 3.43Å; I109-R125 VanDerWaalsContact CD1-NH1 3.33Å
110E84.2Confident73.3Confident58 Ų5855.4 Ų55.427%0.27130%0.304SS..EExtended strand (participates in β ladder)trans-101.7131.6171.8-65-166.4166.600110.8V72 K73 V75 H112 L119 T122V72-E110 CarbonylContact C-O 3.58Å; V72-E110 WeakPolarHBondContact CA-O 3.45Å; K73-E110 PolarHBondContact N-O 2.84Å; K73-E110 PolarHBondContact O-N 2.82Å; V75-E110 HydrophobicContact CB-CG 4.37Å; V75-E110 HydrophobicContact CG2-CB 4.22Å; V75-E110 HydrophobicContact CG2-CG 3.53Å; E110-H112 WeakPolarHBondContact CB-NE2 3.42Å; E110-H112 IonicContact OE2-CE1 3.58Å; E110-H112 IonicContact OE2-NE2 2.95Å; E110-H112 PolarHBondContact OE2-NE2 2.98Å; E110-L119 HydrophobicContact CB-CD1 3.71Å; E110-L119 HydrophobicContact CG-CD1 4.08Å; E110-T122 HydrophobicContact CB-CG2 4.43Å; E110-T122 HydrophobicContact CG-CG2 3.75Å
111H83.7Confident74.7Confident0 Ų056 Ų560%031%0.31CS..EExtended strand (participates in β ladder)trans-97116.2176.4-67.5-97.3000110.2F52 G53 D55 T70 E71 V72 L120 G121F52-H111 HydrophobicContact CD1-CB 4.15Å; F52-H111 AromaticContact CD1-CD2 3.89Å; F52-H111 AromaticContact CD1-CG 3.75Å; F52-H111 AromaticContact CD1-ND1 3.97Å; F52-H111 HydrophobicContact CE1-CB 4.29Å; G53-H111 PolarHBondContact O-NE2 3.01Å; G53-H111 VanDerWaalsContact O-NE2 3.17Å; D55-H111 PolarHBondContact O-CE1 3.21Å; T70-H111 HydrophobicContact CG2-CB 4.07Å; T70-H111 PolarHBondContact OG1-ND1 3.04Å; E71-H111 WeakPolarHBondContact O-CA 3.44Å; V72-H111 WeakPolarHBondContact CG1-CE1 3.1Å; H111-L120 PolarHBondContact O-N 2.9Å; H111-G121 PolarHBondContact N-O 2.77Å
112H85.8Confident75.8Confident27 Ų2753.1 Ų53.113%0.12530%0.303CS..EExtended strand (participates in β ladder)trans-110.5144.8179.7-68.6-94000110.9T70 E71 E110 T118T70-H112 CarbonylContact C-O 3.59Å; T70-H112 WeakPolarHBondContact CA-O 3.5Å; E71-H112 PolarHBondContact N-O 3.49Å; E71-H112 PolarHBondContact O-N 3.21Å; E110-H112 WeakPolarHBondContact CB-NE2 3.42Å; E110-H112 IonicContact OE2-CE1 3.58Å; E110-H112 IonicContact OE2-NE2 2.95Å; E110-H112 PolarHBondContact OE2-NE2 2.98Å; H112-T118 CarbonylContact C-O 3.58Å; H112-T118 WeakPolarHBondContact CA-O 3.4Å
113C89Confident77Confident0 Ų053 Ų530%029%0.291CS..  trans-74.7127173-1790000109.7C64 N115 C116 K117 T118 L120C64-C113 VanDerWaalsContact SG-SG 3.62Å; C113-N115 PolarHBondContact O-N 2.8Å; C113-N115 PolarHBondContact SG-N 3.38Å; C113-C116 WeakPolarHBondContact CB-SG 3.4Å; C113-C116 PolarHBondContact SG-SG 3.31Å; C113-K117 WeakPolarHBondContact O-CA 3.04Å; C113-K117 PolarHBondContact O-N 3.45Å; C113-T118 HydrophobicContact CB-CG2 3.97Å; C113-T118 PolarHBondContact N-O 3.23Å; C113-L120 HydrophobicContact CB-CD1 3.69Å
114P89.9Confident77.5Confident54 Ų5459 Ų5935%0.35131%0.308SS..THydrogen-bonded Turntrans-65.4-26.5177.325.5-34.7000113.2V68 L69 E71V68-P114 HydrophobicContact CB-CG 3.99Å; V68-P114 HydrophobicContact CG1-CG 4.35Å; L69-P114 VanDerWaalsContact O-CD 3.31Å; L69-P114 WeakPolarHBondContact O-CD 3.37Å; L69-P114 WeakPolarHBondContact O-CG 3.47Å; E71-P114 HydrophobicContact CG-CB 4.21Å
115N89.8Confident77.9Confident109 Ų10959.5 Ų59.558%0.58330%0.301SS*.THydrogen-bonded Turntrans-83-53.2-177.3-165.6-5.1000112C113C113-N115 PolarHBondContact O-N 2.8Å; C113-N115 PolarHBondContact SG-N 3.38Å
116C90.2Very high77.6Confident42 Ų4263.8 Ų63.828%0.28431%0.314SS..THydrogen-bonded Turntrans-104.9-4.3-176.863.70000115.1C113 T118C113-C116 WeakPolarHBondContact CB-SG 3.4Å; C113-C116 PolarHBondContact SG-SG 3.31Å; C116-T118 PolarHBondContact O-N 3.47Å; C116-T118 WeakPolarHBondContact SG-CG2 3.35Å
117K87.7Confident78.8Confident163 Ų16364.1 Ų64.171%0.70932%0.315SS*.  trans55.719.2-177.3-57.8176.4-178.4174.20114.5C113C113-K117 WeakPolarHBondContact O-CA 3.04Å; C113-K117 PolarHBondContact O-N 3.45Å
118T85.2Confident79.7Confident49 Ų4966.7 Ų66.730%0.30133%0.328SS..  trans-71.9146.9173.1-158.10000109.8N63 H112 C113 C116 L120N63-T118 HydrophobicContact CB-CG2 4.31Å; H112-T118 CarbonylContact C-O 3.58Å; H112-T118 WeakPolarHBondContact CA-O 3.4Å; C113-T118 HydrophobicContact CB-CG2 3.97Å; C113-T118 PolarHBondContact N-O 3.23Å; C116-T118 PolarHBondContact O-N 3.47Å; C116-T118 WeakPolarHBondContact SG-CG2 3.35Å; T118-L120 HydrophobicContact CG2-CD1 4.25Å; T118-L120 WeakPolarHBondContact O-CD1 3.31Å
119L84.7Confident80.3Confident82 Ų8268.6 Ų68.643%0.42934%0.336SS..EExtended strand (participates in β ladder)trans-79.7115.9173.3-177.279.9000108.6E110 T122E110-L119 HydrophobicContact CB-CD1 3.71Å; E110-L119 HydrophobicContact CG-CD1 4.08Å; L119-T122 HydrophobicContact CD1-CG2 4.06Å; L119-T122 HydrophobicContact CD2-CG2 3.97Å; L119-T122 HydrophobicContact CG-CG2 4.4Å
120L83.8Confident80.5Confident44 Ų4471.9 Ų71.923%0.2335%0.352CS..EExtended strand (participates in β ladder)trans-84.7-32.6177.3-6785.6000112F52 V59 C61 T70 H111 C113 T118F52-L120 HydrophobicContact CE1-CB 4.2Å; F52-L120 HydrophobicContact CZ-CB 3.98Å; V59-L120 HydrophobicContact CB-CD2 4.44Å; V59-L120 HydrophobicContact CG2-CD2 3.31Å; C61-L120 HydrophobicContact CB-CD2 4.34Å; T70-L120 HydrophobicContact CG2-CD1 4.35Å; T70-L120 HydrophobicContact CG2-CD2 4.08Å; H111-L120 PolarHBondContact O-N 2.9Å; C113-L120 HydrophobicContact CB-CD1 3.69Å; T118-L120 HydrophobicContact CG2-CD1 4.25Å; T118-L120 WeakPolarHBondContact O-CD1 3.31Å
121G81Confident80.3Confident15 Ų1572.8 Ų72.816%0.15536%0.357CS..EExtended strand (participates in β ladder)trans-179.7160.9-176.500000112.3H111H111-G121 PolarHBondContact N-O 2.77Å
122T76.4Confident80Confident66 Ų6677.6 Ų77.641%0.40538%0.381SS..EExtended strand (participates in β ladder)trans-120.3129.8174.361.40000108.8I109 E110 L119I109-T122 CarbonylContact O-C 3.55Å; I109-T122 WeakPolarHBondContact O-CA 3.39Å; E110-T122 HydrophobicContact CB-CG2 4.43Å; E110-T122 HydrophobicContact CG-CG2 3.75Å; L119-T122 HydrophobicContact CD1-CG2 4.06Å; L119-T122 HydrophobicContact CD2-CG2 3.97Å; L119-T122 HydrophobicContact CG-CG2 4.4Å
123Y76.9Confident79.6Confident87 Ų8781.2 Ų81.234%0.34140%0.4SS..EExtended strand (participates in β ladder)trans-101.8109.1174-179.2-114.5000108.6F52 G53 I109 R125F52-Y123 WeakPolarHBondContact O-CD2 3.37Å; G53-Y123 VanDerWaalsContact C-CD1 3.49Å; G53-Y123 WeakPolarHBondContact O-CD1 3.23Å; I109-Y123 PolarHBondContact N-O 2.93Å; I109-Y123 PolarHBondContact O-N 3.27Å; Y123-R125 HydrophobicContact CD1-CG 3.9Å; Y123-R125 HydrophobicContact CE1-CG 3.43Å; Y123-R125 VanDerWaalsContact CE1-CG 3.43Å
124R66.3Low78.9Confident172 Ų17287.5 Ų87.565%0.64943%0.43SS*.  trans-92.1125.4173.3-63.8-172.4-177.1165.51.3109.3D108D108-R124 VanDerWaalsContact OD1-CA 3.26Å; D108-R124 WeakPolarHBondContact OD1-CA 3.46Å
125R62.3Low78Confident81 Ų8190.3 Ų90.331%0.30644%0.437SS..  trans-84.5-12.5-179.6-76.5-176.6-179.4125.3-11.1113.3P104 S105 Q107 I109 Y123P104-R125 PolarHBondContact O-NH1 2.88Å; S105-R125 VanDerWaalsContact O-CD 3.25Å; S105-R125 WeakPolarHBondContact O-CD 3.25Å; Q107-R125 PolarHBondContact O-NH1 3.45Å; Q107-R125 VanDerWaalsContact O-NH1 3.09Å; I109-R125 VanDerWaalsContact CD1-CZ 3.43Å; I109-R125 VanDerWaalsContact CD1-NH1 3.33Å; Y123-R125 HydrophobicContact CD1-CG 3.9Å; Y123-R125 HydrophobicContact CE1-CG 3.43Å; Y123-R125 VanDerWaalsContact CE1-CG 3.43Å
126M51.4Low76.9Confident173 Ų17388.5 Ų88.585%0.85242%0.424SS*.  trans-140.30176.8-63.9-167.8-169.900111.5L79 L106L79-M126 HydrophobicContact CD1-CE 4.17Å; L79-M126 HydrophobicContact CD1-CG 4.37Å; L79-M126 HydrophobicContact CD1-SD 3.6Å; L79-M126 VanDerWaalsContact CD1-SD 3.6Å; L79-M126 HydrophobicContact CD2-SD 4.38Å; L106-M126 HydrophobicContact CD2-CE 3.73Å

Retrieved 126 of 126 residues in 19.5 ms (Link to these results)