A0A077Z575_TRITR Loading...

DNA-directed RNA polymerases I, II, and III subun it RPABC4

AlphaFold DB , UniProt , Accession A0A077Z575, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 66 aa.

						>A0A077Z575_TRITR|A0A077Z575
MSSNQNTNTSNQQQSTPQKPPPMVYVCGDCAYENEIRPKDAIRCRECGYRVLYKKRTRREMVFDAR
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	62	Low	64.4	Low	245 Å²	245	146.2 Å²	146.2	100%	1.207	83%	0.829	S	S	*	*				0	98.7	0	-60	175.6	171.7	0	0	105.4
2	S	63	Low	64.1	Low	125 Å²	125	148.6 Å²	148.6	87%	0.874	83%	0.828	S	S	*	*			cis	-145.5	141.2	32.3	-62.3	0	0	0	0	110.2
3	S	65.1	Low	64	Low	107 Å²	107	150.5 Å²	150.5	75%	0.748	83%	0.827	S	S	*	*			trans	-75.2	143.2	174.3	-42.9	0	0	0	0	110.4
4	N	75.7	Confident	63.7	Low	174 Å²	174	153.5 Å²	153.5	93%	0.93	83%	0.832	S	S	*	*			trans	-149.9	105	146	-100.9	-11.3	0	0	0	108.9
5	Q	72.5	Confident	63.4	Low	168 Å²	168	150.9 Å²	150.9	79%	0.785	83%	0.83	S	S	*	*			trans	-100.6	157.9	171.4	-68.9	180	5.1	0	0	109.4
6	N	67.3	Low	63.8	Low	139 Å²	139	148.3 Å²	148.3	74%	0.743	82%	0.82	S	S	*	*			trans	78.4	141.2	153	-80.7	-5.1	0	0	0	118
7	T	65.5	Low	64.2	Low	113 Å²	113	147.2 Å²	147.2	69%	0.693	82%	0.821	S	S	*	*			cis	-163.9	145.2	9.4	12	0	0	0	0	109.4
8	N	61.1	Low	64.7	Low	157 Å²	157	148.9 Å²	148.9	84%	0.84	82%	0.822	S	S	*	*			trans	-60.2	140.8	165.3	-73.6	-39.1	0	0	0	112.1
9	T	59.2	Low	65.3	Low	140 Å²	140	151.1 Å²	151.1	86%	0.859	82%	0.822	S	S	*	*			trans	-128.8	88.5	153.4	-32.7	0	0	0	0	108.4	N11	T9-N11 PolarHBondContact O-N 3.33Å
10	S	58.1	Low	65.9	Low	94 Å²	94	148.9 Å²	148.9	66%	0.657	82%	0.816	S	S	*	*			trans	-73.9	109.2	172.7	41.2	0	0	0	0	110.2	Q12	S10-Q12 PolarHBondContact O-N 2.93Å
11	N	59	Low	66.6	Low	146 Å²	146	146.7 Å²	146.7	78%	0.781	81%	0.809	S	S	*	*			trans	-86.4	88.4	172	-134.5	0.7	0	0	0	108.5	T9 Q13	T9-N11 PolarHBondContact O-N 3.33Å; N11-Q13 PolarHBondContact O-N 3.1Å
12	Q	60.5	Low	67.7	Low	175 Å²	175	139.7 Å²	139.7	82%	0.818	78%	0.782	S	S	*	*			trans	-83.7	92.7	170.8	-69.7	-173	43.6	0	0	108.9	S10 Q14	S10-Q12 PolarHBondContact O-N 2.93Å; Q12-Q14 PolarHBondContact O-N 3.02Å
13	Q	62.8	Low	68.9	Low	174 Å²	174	138.4 Å²	138.4	81%	0.813	76%	0.763	S	S	*	*			trans	-74.4	106	168.7	-80.5	171	-12.7	0	0	109.3	N11 S15	N11-Q13 PolarHBondContact O-N 3.1Å; Q13-S15 PolarHBondContact O-N 2.8Å
14	Q	59.6	Low	70.2	Confident	192 Å²	192	135.4 Å²	135.4	90%	0.897	74%	0.74	S	S	*	*			trans	-62.3	109.2	172.1	-121.6	166.6	3.6	0	0	109.7	Q12 T16	Q12-Q14 PolarHBondContact O-N 3.02Å; Q14-T16 PolarHBondContact O-N 3.05Å
15	S	59.9	Low	71.2	Confident	115 Å²	115	130.2 Å²	130.2	80%	0.804	71%	0.708	S	S	*	*			trans	-69.5	106	173.6	54.7	0	0	0	0	109.9	Q13	Q13-S15 PolarHBondContact O-N 2.8Å
16	T	69.7	Low	72.4	Confident	108 Å²	108	123.9 Å²	123.9	66%	0.663	68%	0.681	S	S	*	*			trans	-62	141.7	164.3	51.1	0	0	0	0	108.9	Q14 Q18	Q14-T16 PolarHBondContact O-N 3.05Å; T16-Q18 PolarHBondContact O-N 3.09Å
17	P	69.5	Low	73.8	Confident	130 Å²	130	117.4 Å²	117.4	84%	0.844	65%	0.646	S	S	*	*			trans	-64.7	99.2	177.5	24.5	-31.2	0	0	0	109	K19	P17-K19 PolarHBondContact O-N 3.45Å
18	Q	73.7	Confident	75.3	Confident	178 Å²	178	113.7 Å²	113.7	83%	0.832	63%	0.63	S	S	*	*	P	Polyproline II helix	trans	-64.6	122.7	177	-68.9	-176.2	-4.5	0	0	108.5	T16	T16-Q18 PolarHBondContact O-N 3.09Å
19	K	76.9	Confident	77	Confident	191 Å²	191	111.8 Å²	111.8	83%	0.83	62%	0.62	S	S	*	*	P	Polyproline II helix	trans	-55.1	140.6	172.9	-69.9	177.2	-177	174	0	108.8	P17	P17-K19 PolarHBondContact O-N 3.45Å
20	P	77.1	Confident	78.8	Confident	107 Å²	107	107.9 Å²	107.9	70%	0.695	60%	0.597	S	S	*	*	P	Polyproline II helix	trans	-56.8	137	178.3	23.4	-32.4	0	0	0	109.5
21	P	81.2	Confident	80.6	Confident	103 Å²	103	106.7 Å²	106.7	67%	0.669	59%	0.594	S	S	*	*	P	Polyproline II helix	trans	-60.2	148.7	179.8	25.2	-33.6	0	0	0	110.2	M23	P21-M23 PolarHBondContact O-N 3.23Å
22	P	83.5	Confident	82.4	Confident	98 Å²	98	105.3 Å²	105.3	64%	0.636	58%	0.578	S	S	*	*	P	Polyproline II helix	trans	-56.9	134.9	175.1	24.5	-32.6	0	0	0	110.1
23	M	89	Confident	84.1	Confident	98 Å²	98	101.7 Å²	101.7	48%	0.483	56%	0.561	S	S	.	*	E	Extended strand (participates in β ladder)	trans	-92.9	124.2	179.6	-65.9	-166.9	-169.3	0	0	110.1	P21 Y25 I36	P21-M23 PolarHBondContact O-N 3.23Å; M23-Y25 HydrophobicContact CB-CD2 4.47Å; M23-Y25 HydrophobicContact CB-CE2 3.73Å; M23-I36 PolarHBondContact O-N 3.32Å
24	V	93.2	Very high	85.6	Confident	43 Å²	43	93.5 Å²	93.5	26%	0.261	52%	0.523	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-94.9	127.1	175.9	-175.7	0	0	0	0	109.5	E33 E35	V24-E33 HydrophobicContact CG1-CB 3.86Å; V24-E33 HydrophobicContact CG1-CG 4.29Å; V24-E35 HydrophobicContact CG2-CG 4.24Å
25	Y	96.3	Very high	87.2	Confident	65 Å²	65	89.9 Å²	89.9	26%	0.255	51%	0.506	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-112.7	155.9	174.7	-63.3	-95.6	0	0	0	110.7	M23 E33 N34 I36 L52 Y53 K54	M23-Y25 HydrophobicContact CB-CD2 4.47Å; M23-Y25 HydrophobicContact CB-CE2 3.73Å; Y25-E33 CarbonylContact O-C 3.59Å; Y25-E33 WeakPolarHBondContact O-CA 3.37Å; Y25-N34 PolarHBondContact N-O 2.76Å; Y25-N34 PolarHBondContact O-N 3.45Å; Y25-I36 HydrophobicContact CD2-CB 3.87Å; Y25-I36 HydrophobicContact CD2-CG1 3.93Å; Y25-I36 HydrophobicContact CE2-CB 4Å; Y25-L52 HydrophobicContact CD1-CB 4.47Å; Y25-L52 HydrophobicContact CG-CB 4.46Å; Y25-Y53 CarbonylContact C-O 3.53Å; Y25-Y53 VanDerWaalsContact CA-O 3.23Å; Y25-Y53 WeakPolarHBondContact CA-O 3.24Å; Y25-K54 HydrophobicContact CD1-CB 4.41Å; Y25-K54 HydrophobicContact CE1-CB 4.35Å
26	V	96.7	Very high	88.8	Confident	36 Å²	36	85.3 Å²	85.3	22%	0.218	47%	0.472	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-113.5	129.2	-179.5	-177.4	0	0	0	0	108.7	A31 L52 Y53 K55	V26-A31 HydrophobicContact CG1-CB 4.46Å; V26-A31 WeakPolarHBondContact CG1-O 3.41Å; V26-L52 CarbonylContact O-C 3.45Å; V26-L52 WeakPolarHBondContact O-CA 3.47Å; V26-Y53 PolarHBondContact N-O 2.61Å; V26-Y53 PolarHBondContact O-N 2.75Å; V26-K55 HydrophobicContact CG2-CB 4.4Å; V26-K55 HydrophobicContact CG2-CG 4.4Å
27	C	97.8	Very high	89.7	Confident	3 Å²	3	88.9 Å²	88.9	2%	0.02	47%	0.474	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-63.8	136.2	177.5	-175.8	0	0	0	0	111.4	D29 C30 A31 Y32 C44 L52	C27-D29 VanDerWaalsContact C-N 3.26Å; C27-D29 PolarHBondContact O-N 2.86Å; C27-C30 VanDerWaalsContact CB-SG 3.54Å; C27-A31 VanDerWaalsContact O-CA 3.25Å; C27-A31 WeakPolarHBondContact O-CA 3.49Å; C27-A31 PolarHBondContact O-N 2.74Å; C27-Y32 PolarHBondContact N-O 3.04Å; C27-C44 HydrophobicContact CB-CB 4.06Å; C27-C44 VanDerWaalsContact SG-CB 3.57Å; C27-C44 VanDerWaalsContact SG-SG 3.62Å; C27-L52 HydrophobicContact CB-CD2 4.17Å
28	G	96.2	Very high	90.7	Very high	34 Å²	34	88.3 Å²	88.3	35%	0.351	47%	0.47	S	S	.	.	T	Hydrogen-bonded Turn	trans	-70.9	-17.2	179	0	0	0	0	0	115.3	V51	G28-V51 PolarHBondContact N-O 3.21Å; G28-V51 VanDerWaalsContact N-O 3.09Å
29	D	97.4	Very high	91.5	Very high	118 Å²	118	90.4 Å²	90.4	63%	0.631	48%	0.476	S	S	*	.	T	Hydrogen-bonded Turn	trans	-105.6	-60.3	-176.9	-171.6	31.4	0	0	0	111.6	C27 Y49	C27-D29 VanDerWaalsContact C-N 3.26Å; C27-D29 PolarHBondContact O-N 2.86Å; D29-Y49 HydrophobicContact CB-CD1 3.82Å; D29-Y49 HydrophobicContact CB-CE1 4.23Å; D29-Y49 HydrophobicContact CB-CG 3.99Å
30	C	97.2	Very high	92.2	Very high	57 Å²	57	84.5 Å²	84.5	39%	0.385	45%	0.454	S	S	.	.	T	Hydrogen-bonded Turn	trans	-90.2	-0.2	-178.2	67.4	0	0	0	0	115	C27 Y32 C47	C27-C30 VanDerWaalsContact CB-SG 3.54Å; C30-Y32 PolarHBondContact O-N 2.96Å; C30-Y32 VanDerWaalsContact SG-CB 3.52Å; C30-C47 HydrophobicContact CB-CB 4.44Å
31	A	96	Very high	93	Very high	70 Å²	70	83.4 Å²	83.4	58%	0.579	45%	0.454	S	S	*	.			trans	56.7	13.5	-175.8	0	0	0	0	0	115.8	V26 C27	V26-A31 HydrophobicContact CG1-CB 4.46Å; V26-A31 WeakPolarHBondContact CG1-O 3.41Å; C27-A31 VanDerWaalsContact O-CA 3.25Å; C27-A31 WeakPolarHBondContact O-CA 3.49Å; C27-A31 PolarHBondContact O-N 2.74Å
32	Y	96.6	Very high	93.6	Very high	117 Å²	117	83.1 Å²	83.1	46%	0.459	45%	0.446	S	S	.	.			trans	-73.1	143.8	-179.9	-165.4	-96.7	0	0	0	112.6	C27 C30 N34 E46	C27-Y32 PolarHBondContact N-O 3.04Å; C30-Y32 PolarHBondContact O-N 2.96Å; C30-Y32 VanDerWaalsContact SG-CB 3.52Å; Y32-N34 PolarHBondContact O-ND2 2.78Å; Y32-N34 VanDerWaalsContact O-ND2 3.15Å; Y32-E46 HydrophobicContact CD1-CG 3.53Å; Y32-E46 HydrophobicContact CD2-CG 3.92Å; Y32-E46 HydrophobicContact CE1-CG 3.82Å; Y32-E46 HydrophobicContact CE2-CG 4.17Å; Y32-E46 HydrophobicContact CG-CG 3.58Å
33	E	95.7	Very high	94.2	Very high	98 Å²	98	84.7 Å²	84.7	46%	0.458	44%	0.439	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-82.1	121.3	178.9	-63.7	-169.3	-160.3	0	0	111	V24 Y25 K55	V24-E33 HydrophobicContact CG1-CB 3.86Å; V24-E33 HydrophobicContact CG1-CG 4.29Å; Y25-E33 CarbonylContact O-C 3.59Å; Y25-E33 WeakPolarHBondContact O-CA 3.37Å; E33-K55 IonicContact OE1-NZ 2.61Å; E33-K55 PolarHBondContact OE1-NZ 3.31Å; E33-K55 IonicContact OE2-NZ 2.75Å; E33-K55 PolarHBondContact OE2-NZ 3.38Å
34	N	94.7	Very high	94.6	Very high	2 Å²	2	80.1 Å²	80.1	1%	0.011	42%	0.417	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-117.5	125.1	-179.4	-68.4	-84.1	0	0	0	110.5	Y25 Y32 I36 C44 R45	Y25-N34 PolarHBondContact N-O 2.76Å; Y25-N34 PolarHBondContact O-N 3.45Å; Y32-N34 PolarHBondContact O-ND2 2.78Å; Y32-N34 VanDerWaalsContact O-ND2 3.15Å; N34-I36 HydrophobicContact CB-CD1 4.28Å; N34-I36 HydrophobicContact CB-CG1 4.4Å; N34-C44 PolarHBondContact ND2-SG 3.28Å; N34-R45 PolarHBondContact OD1-N 2.88Å
35	E	93.7	Very high	94.6	Very high	117 Å²	117	86.3 Å²	86.3	55%	0.547	44%	0.435	S	S	.	.	E	Extended strand (participates in β ladder)	trans	-83.3	117.9	167.1	-68	-175.3	-171.8	0	0	109.9	V24 R45	V24-E35 HydrophobicContact CG2-CG 4.24Å; E35-R45 PolarHBondContact O-NH2 3.38Å
36	I	92.3	Very high	94.6	Very high	18 Å²	18	89 Å²	89	9%	0.092	45%	0.45	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-120.1	123.3	-178.9	-55.5	-63.3	0	0	0	108.4	M23 Y25 N34 D40 I42 L52	M23-I36 PolarHBondContact O-N 3.32Å; Y25-I36 HydrophobicContact CD2-CB 3.87Å; Y25-I36 HydrophobicContact CD2-CG1 3.93Å; Y25-I36 HydrophobicContact CE2-CB 4Å; N34-I36 HydrophobicContact CB-CD1 4.28Å; N34-I36 HydrophobicContact CB-CG1 4.4Å; I36-D40 HydrophobicContact CG2-CB 3.99Å; I36-I42 HydrophobicContact CG2-CD1 4.11Å; I36-L52 HydrophobicContact CD1-CD1 4.09Å; I36-L52 HydrophobicContact CG1-CD1 3.87Å
37	R	90.3	Very high	94.6	Very high	183 Å²	183	90.1 Å²	90.1	69%	0.691	46%	0.459	S	S	*	.			trans	-90.2	160.8	176.5	-54.9	176	69.7	-161.6	1.6	110.2	K39 D40	R37-K39 PolarHBondContact O-N 3.19Å; R37-D40 VanDerWaalsContact CB-OD2 3.24Å; R37-D40 WeakPolarHBondContact CB-OD2 3.38Å; R37-D40 PolarHBondContact N-OD2 3.15Å; R37-D40 WeakPolarHBondContact O-CB 3.48Å; R37-D40 PolarHBondContact O-N 3.36Å; R37-D40 VanDerWaalsContact O-N 3.1Å
38	P	89.6	Confident	94.5	Very high	119 Å²	119	91.2 Å²	91.2	77%	0.773	47%	0.471	S	S	*	.	T	Hydrogen-bonded Turn	trans	-55.4	133.9	170.8	-23.3	33.8	0	0	0	110.6	D40	P38-D40 VanDerWaalsContact C-N 3.32Å
39	K	90.2	Very high	94.5	Very high	221 Å²	221	94.5 Å²	94.5	96%	0.961	47%	0.474	S	S	*	.	T	Hydrogen-bonded Turn	trans	78.1	-5.1	-175.8	-48.8	176.1	178.9	-176.9	0	116.4	R37	R37-K39 PolarHBondContact O-N 3.19Å
40	D	91	Very high	94.5	Very high	67 Å²	67	96.6 Å²	96.6	36%	0.358	47%	0.473	S	S	.	.			trans	-69.7	150.2	173.2	-70.6	-10.2	0	0	0	110.8	I36 R37 P38	I36-D40 HydrophobicContact CG2-CB 3.99Å; R37-D40 VanDerWaalsContact CB-OD2 3.24Å; R37-D40 WeakPolarHBondContact CB-OD2 3.38Å; R37-D40 PolarHBondContact N-OD2 3.15Å; R37-D40 WeakPolarHBondContact O-CB 3.48Å; R37-D40 PolarHBondContact O-N 3.36Å; R37-D40 VanDerWaalsContact O-N 3.1Å; P38-D40 VanDerWaalsContact C-N 3.32Å
41	A	93.9	Very high	94.5	Very high	84 Å²	84	97 Å²	97	69%	0.694	47%	0.473	S	S	*	.			trans	-67	134.9	175	0	0	0	0	0	111	R43	A41-R43 PolarHBondContact O-N 3.17Å
42	I	94.7	Very high	94.5	Very high	97 Å²	97	94.9 Å²	94.9	50%	0.497	45%	0.452	S	S	.	.			trans	-75.1	97.4	177.5	-51.5	-57.1	0	0	0	109.5	I36 R50 L52	I36-I42 HydrophobicContact CG2-CD1 4.11Å; I42-R50 WeakPolarHBondContact CG2-O 3.33Å; I42-L52 HydrophobicContact CG2-CD1 4.04Å; I42-L52 HydrophobicContact CG2-CG 4.24Å
43	R	95.7	Very high	94.5	Very high	131 Å²	131	96.2 Å²	96.2	49%	0.494	46%	0.457	S	S	.	.			trans	-156	137.5	177.8	-169	-175.2	-70.4	-171.4	0.7	110.5	A41 G48 Y49	A41-R43 PolarHBondContact O-N 3.17Å; R43-G48 WeakPolarHBondContact CG-O 3.23Å; R43-Y49 CarbonylContact C-O 3.51Å; R43-Y49 WeakPolarHBondContact CA-O 3.47Å
44	C	96.8	Very high	94.4	Very high	2 Å²	2	99.2 Å²	99.2	1%	0.014	47%	0.469	C	S	.	.			trans	-67	130.4	167.2	-177.9	0	0	0	0	110.1	C27 N34 E46 C47 G48 Y49 L52	C27-C44 HydrophobicContact CB-CB 4.06Å; C27-C44 VanDerWaalsContact SG-CB 3.57Å; C27-C44 VanDerWaalsContact SG-SG 3.62Å; N34-C44 PolarHBondContact ND2-SG 3.28Å; C44-E46 VanDerWaalsContact C-N 3.31Å; C44-E46 PolarHBondContact O-N 2.83Å; C44-C47 VanDerWaalsContact SG-SG 3.68Å; C44-G48 WeakPolarHBondContact O-CA 3.37Å; C44-G48 PolarHBondContact O-N 2.99Å; C44-Y49 PolarHBondContact N-O 3.18Å; C44-L52 HydrophobicContact CB-CD2 4.09Å
45	R	94.1	Very high	94.3	Very high	173 Å²	173	103.3 Å²	103.3	65%	0.653	49%	0.487	S	S	*	.	T	Hydrogen-bonded Turn	trans	-69.1	-29.7	-178.2	-62.2	-175.8	-174	-154.6	5.5	113	N34 E35	N34-R45 PolarHBondContact OD1-N 2.88Å; E35-R45 PolarHBondContact O-NH2 3.38Å
46	E	96.1	Very high	94.3	Very high	121 Å²	121	106.1 Å²	106.1	57%	0.565	49%	0.492	S	S	*	.	T	Hydrogen-bonded Turn	trans	-81.9	-56.7	-179.3	-59	-56.5	143.6	0	0	113.7	Y32 C44	Y32-E46 HydrophobicContact CD1-CG 3.53Å; Y32-E46 HydrophobicContact CD2-CG 3.92Å; Y32-E46 HydrophobicContact CE1-CG 3.82Å; Y32-E46 HydrophobicContact CE2-CG 4.17Å; Y32-E46 HydrophobicContact CG-CG 3.58Å; C44-E46 VanDerWaalsContact C-N 3.31Å; C44-E46 PolarHBondContact O-N 2.83Å
47	C	96.6	Very high	94.2	Very high	60 Å²	60	109.1 Å²	109.1	41%	0.405	51%	0.511	S	S	.	.	T	Hydrogen-bonded Turn	trans	-105.7	-6.3	-172.5	66.9	0	0	0	0	115	C30 C44 Y49	C30-C47 HydrophobicContact CB-CB 4.44Å; C44-C47 VanDerWaalsContact SG-SG 3.68Å; C47-Y49 PolarHBondContact O-N 3.25Å; C47-Y49 VanDerWaalsContact SG-CB 3.54Å
48	G	95.8	Very high	94.3	Very high	27 Å²	27	112.2 Å²	112.2	28%	0.278	52%	0.523	S	S	.	.			trans	75	0.3	-178.7	0	0	0	0	0	115.7	R43 C44	R43-G48 WeakPolarHBondContact CG-O 3.23Å; C44-G48 WeakPolarHBondContact O-CA 3.37Å; C44-G48 PolarHBondContact O-N 2.99Å
49	Y	96.7	Very high	94.4	Very high	103 Å²	103	116.4 Å²	116.4	40%	0.404	52%	0.523	S	S	.	.			trans	-60	148.6	174.5	-165.3	-125.2	0	0	0	111.4	D29 R43 C44 C47 V51	D29-Y49 HydrophobicContact CB-CD1 3.82Å; D29-Y49 HydrophobicContact CB-CE1 4.23Å; D29-Y49 HydrophobicContact CB-CG 3.99Å; R43-Y49 CarbonylContact C-O 3.51Å; R43-Y49 WeakPolarHBondContact CA-O 3.47Å; C44-Y49 PolarHBondContact N-O 3.18Å; C47-Y49 PolarHBondContact O-N 3.25Å; C47-Y49 VanDerWaalsContact SG-CB 3.54Å; Y49-V51 HydrophobicContact CD1-CB 4.12Å; Y49-V51 WeakPolarHBondContact CD1-O 3.25Å; Y49-V51 HydrophobicContact CE1-CB 3.52Å; Y49-V51 HydrophobicContact CE1-CG2 3.97Å
50	R	96.5	Very high	94.6	Very high	162 Å²	162	114.8 Å²	114.8	61%	0.611	52%	0.519	S	S	*	.			trans	-108.8	1.2	-169.9	-66.2	-178.7	178	79.1	-6.4	114.4	I42	I42-R50 WeakPolarHBondContact CG2-O 3.33Å
51	V	96.9	Very high	94.8	Very high	64 Å²	64	116.7 Å²	116.7	39%	0.388	53%	0.528	S	S	.	.			trans	-106.3	123.1	174.9	-173.9	0	0	0	0	108.9	G28 Y49 Y53	G28-V51 PolarHBondContact N-O 3.21Å; G28-V51 VanDerWaalsContact N-O 3.09Å; Y49-V51 HydrophobicContact CD1-CB 4.12Å; Y49-V51 WeakPolarHBondContact CD1-O 3.25Å; Y49-V51 HydrophobicContact CE1-CB 3.52Å; Y49-V51 HydrophobicContact CE1-CG2 3.97Å; V51-Y53 HydrophobicContact CG1-CE1 4.43Å
52	L	96.4	Very high	94.8	Very high	27 Å²	27	119.1 Å²	119.1	14%	0.141	53%	0.533	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-127.4	135	-179.8	-54.3	177.3	0	0	0	109	Y25 V26 C27 I36 I42 C44	Y25-L52 HydrophobicContact CD1-CB 4.47Å; Y25-L52 HydrophobicContact CG-CB 4.46Å; V26-L52 CarbonylContact O-C 3.45Å; V26-L52 WeakPolarHBondContact O-CA 3.47Å; C27-L52 HydrophobicContact CB-CD2 4.17Å; I36-L52 HydrophobicContact CD1-CD1 4.09Å; I36-L52 HydrophobicContact CG1-CD1 3.87Å; I42-L52 HydrophobicContact CG2-CD1 4.04Å; I42-L52 HydrophobicContact CG2-CG 4.24Å; C44-L52 HydrophobicContact CB-CD2 4.09Å
53	Y	96.9	Very high	94.8	Very high	144 Å²	144	121.3 Å²	121.3	57%	0.565	54%	0.54	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-97.4	145.8	176.7	-61.3	-64.2	0	0	0	111.2	Y25 V26 V51	Y25-Y53 CarbonylContact C-O 3.53Å; Y25-Y53 VanDerWaalsContact CA-O 3.23Å; Y25-Y53 WeakPolarHBondContact CA-O 3.24Å; V26-Y53 PolarHBondContact N-O 2.61Å; V26-Y53 PolarHBondContact O-N 2.75Å; V51-Y53 HydrophobicContact CG1-CE1 4.43Å
54	K	94.1	Very high	94.8	Very high	161 Å²	161	120.6 Å²	120.6	70%	0.7	55%	0.546	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-76.7	131.9	173.6	-174	-177.5	177.4	-172.9	0	109.9	Y25	Y25-K54 HydrophobicContact CD1-CB 4.41Å; Y25-K54 HydrophobicContact CE1-CB 4.35Å
55	K	92.5	Very high	94.7	Very high	89 Å²	89	125.6 Å²	125.6	39%	0.387	59%	0.587	S	S	.	*	P	Polyproline II helix	trans	-63.6	143.5	177.6	-158.5	172.5	-166.3	172.6	0	111.5	V26 E33	V26-K55 HydrophobicContact CG2-CB 4.4Å; V26-K55 HydrophobicContact CG2-CG 4.4Å; E33-K55 IonicContact OE1-NZ 2.61Å; E33-K55 PolarHBondContact OE1-NZ 3.31Å; E33-K55 IonicContact OE2-NZ 2.75Å; E33-K55 PolarHBondContact OE2-NZ 3.38Å
56	R	92.7	Very high	94.6	Very high	176 Å²	176	130.8 Å²	130.8	66%	0.664	61%	0.606	S	S	*	*	P	Polyproline II helix	trans	-57.7	144.8	173.9	-173.4	-178	168.7	104.7	0.1	110
57	T	91.9	Very high	94.5	Very high	81 Å²	81	131.3 Å²	131.3	50%	0.497	61%	0.608	S	S	.	*	P	Polyproline II helix	trans	-62.6	148.7	173.2	-174.7	0	0	0	0	111.5	R59	T57-R59 VanDerWaalsContact C-N 3.28Å; T57-R59 HydrophobicContact CG2-CB 4.26Å; T57-R59 PolarHBondContact OG1-N 3.3Å
58	R	90.9	Very high	94.4	Very high	248 Å²	248	135 Å²	135	94%	0.936	62%	0.619	S	S	*	*	S	Bend	trans	-81.4	-7.5	170.6	-66.1	-174.9	-179.5	176.7	0	113.2
59	R	92	Very high	94.3	Very high	206 Å²	206	141 Å²	141	78%	0.777	64%	0.638	S	S	*	*	S	Bend	trans	-70.1	140.9	177.6	-63.3	-179	-176.9	171.8	-0.8	109.7	T57	T57-R59 VanDerWaalsContact C-N 3.28Å; T57-R59 HydrophobicContact CG2-CB 4.26Å; T57-R59 PolarHBondContact OG1-N 3.3Å
60	E	94.7	Very high	94.2	Very high	187 Å²	187	143.2 Å²	143.2	87%	0.874	65%	0.652	S	S	*	*			trans	-59.3	140	172.1	-66	-178.2	166.3	0	0	109.9
61	M	94	Very high	94	Very high	108 Å²	108	142.1 Å²	142.1	53%	0.532	65%	0.654	S	S	.	*			trans	-126.3	111.4	177.7	-167.3	174.4	-176	0	0	106.8	F63	M61-F63 HydrophobicContact CB-CE2 4.05Å; M61-F63 HydrophobicContact CB-CZ 4.47Å; M61-F63 HydrophobicContact CE-CE1 3.39Å; M61-F63 HydrophobicContact CE-CE2 4.21Å; M61-F63 HydrophobicContact CE-CZ 3.22Å; M61-F63 HydrophobicContact CG-CD2 4.32Å; M61-F63 HydrophobicContact CG-CE1 4.24Å; M61-F63 HydrophobicContact CG-CE2 3.54Å; M61-F63 HydrophobicContact CG-CZ 3.54Å; M61-F63 HydrophobicContact SD-CE1 4.06Å; M61-F63 HydrophobicContact SD-CE2 3.76Å; M61-F63 HydrophobicContact SD-CZ 3.24Å; M61-F63 WeakPolarHBondContact SD-CZ 3.24Å
62	V	95.3	Very high	93.8	Very high	134 Å²	134	147.3 Å²	147.3	81%	0.812	67%	0.672	S	S	*	*			trans	-98.5	133.6	-179.9	-177.3	0	0	0	0	108.2
63	F	94.7	Very high	93.6	Very high	144 Å²	144	155.9 Å²	155.9	63%	0.632	71%	0.71	S	S	*	*			trans	-122	137.3	176.6	-60	-90.5	0	0	0	108.3	M61	M61-F63 HydrophobicContact CB-CE2 4.05Å; M61-F63 HydrophobicContact CB-CZ 4.47Å; M61-F63 HydrophobicContact CE-CE1 3.39Å; M61-F63 HydrophobicContact CE-CE2 4.21Å; M61-F63 HydrophobicContact CE-CZ 3.22Å; M61-F63 HydrophobicContact CG-CD2 4.32Å; M61-F63 HydrophobicContact CG-CE1 4.24Å; M61-F63 HydrophobicContact CG-CE2 3.54Å; M61-F63 HydrophobicContact CG-CZ 3.54Å; M61-F63 HydrophobicContact SD-CE1 4.06Å; M61-F63 HydrophobicContact SD-CE2 3.76Å; M61-F63 HydrophobicContact SD-CZ 3.24Å; M61-F63 WeakPolarHBondContact SD-CZ 3.24Å
64	D	95.6	Very high	93.4	Very high	116 Å²	116	156.8 Å²	156.8	62%	0.62	72%	0.721	S	S	*	*			trans	-92.3	141.4	164.9	-163.7	2.4	0	0	0	108.3	R66	D64-R66 VanDerWaalsContact C-N 3.3Å; D64-R66 IonicContact OD1-NE 3.96Å; D64-R66 VanDerWaalsContact OD2-CD 3.32Å; D64-R66 WeakPolarHBondContact OD2-CD 3.32Å; D64-R66 IonicContact OD2-NE 3.69Å; D64-R66 IonicContact OD2-NH1 3.99Å
65	A	94.2	Very high	93.3	Very high	107 Å²	107	156.4 Å²	156.4	88%	0.884	72%	0.723	S	S	*	*			trans	-96.6	22	-174.8	0	0	0	0	0	112.6
66	R	91.4	Very high	93.4	Very high	281 Å²	281	162.5 Å²	162.5	100%	1.06	75%	0.754	S	S	*	*			trans	-92.3	0	-178.3	-66.7	179.9	-175.9	170.4	-2.2	112.1	D64	D64-R66 VanDerWaalsContact C-N 3.3Å; D64-R66 IonicContact OD1-NE 3.96Å; D64-R66 VanDerWaalsContact OD2-CD 3.32Å; D64-R66 WeakPolarHBondContact OD2-CD 3.32Å; D64-R66 IonicContact OD2-NE 3.69Å; D64-R66 IonicContact OD2-NH1 3.99Å

Retrieved 66 of 66 residues in 15.6 ms (Link to these results)

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