A0A077Z5R8_TRITR Loading...

DNA-directed RNA polymerase

AlphaFold DB , UniProt , Accession A0A077Z5R8, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 63 aa.

						>A0A077Z5R8_TRITR|A0A077Z5R8
MCISTSLLQEMTFQTTTAFMKDAILNKLCIMDVEDLLNTPSGVVIGRLPHVGTGCFDILYLLY
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	34.9	Very low	61.4	Low	245 Å²	245	80.8 Å²	80.8	100%	1.207	45%	0.45	S	S	*	.				0	90.3	0	-147.8	159.2	-180	0	0	105.8
2	C	33.4	Very low	62.8	Low	131 Å²	131	82.3 Å²	82.3	89%	0.885	46%	0.462	S	S	*	.			trans	-132.9	65.1	-171.2	-154.8	0	0	0	0	107.4
3	I	48.6	Very low	63.8	Low	143 Å²	143	88.5 Å²	88.5	73%	0.733	48%	0.482	S	S	*	.	S	Bend	trans	-141.2	96.4	179.9	-65.6	178.1	0	0	0	105.4	T5	I3-T5 PolarHBondContact O-N 3.4Å; I3-T5 VanDerWaalsContact O-N 3.1Å
4	S	55.4	Low	64.3	Low	109 Å²	109	90.6 Å²	90.6	76%	0.762	49%	0.487	S	S	*	.			trans	41.9	51.5	159.2	59.4	0	0	0	0	117.7
5	T	62	Low	65.1	Low	58 Å²	58	90.5 Å²	90.5	36%	0.356	49%	0.491	S	S	.	.			trans	-85.6	130.2	164	42.8	0	0	0	0	109.1	I3 E10	I3-T5 PolarHBondContact O-N 3.4Å; I3-T5 VanDerWaalsContact O-N 3.1Å; T5-E10 PolarHBondContact OG1-OE1 2.74Å
6	S	68.6	Low	66.1	Low	8 Å²	8	89.8 Å²	89.8	6%	0.056	49%	0.491	C	S	.	.			trans	-66.3	148.5	177.3	64	0	0	0	0	111	L8 Q9 E10 T39 S41	S6-L8 PolarHBondContact O-N 2.89Å; S6-Q9 WeakPolarHBondContact O-CA 3.17Å; S6-Q9 VanDerWaalsContact O-CB 3.25Å; S6-Q9 WeakPolarHBondContact O-CB 3.47Å; S6-Q9 PolarHBondContact O-N 3.1Å; S6-E10 PolarHBondContact O-N 3.3Å; S6-T39 VanDerWaalsContact CB-CB 3.43Å; S6-T39 WeakPolarHBondContact CB-OG1 3.28Å; S6-T39 WeakPolarHBondContact OG-CB 3.5Å; S6-T39 PolarHBondContact OG-OG1 3.26Å; S6-S41 PolarHBondContact OG-OG 2.87Å
7	L	70.6	Confident	67	Low	20 Å²	20	91.1 Å²	91.1	11%	0.105	50%	0.502	C	S	.	.	H	α-helix	trans	-51.7	-42.4	179.6	177.7	78.4	0	0	0	112.5	Q9 E10 M11 A23 K27 M31	L7-Q9 VanDerWaalsContact C-N 3.26Å; L7-Q9 PolarHBondContact O-N 3.16Å; L7-E10 PolarHBondContact O-N 3.07Å; L7-E10 VanDerWaalsContact O-N 3.16Å; L7-M11 HydrophobicContact CD2-CE 4.04Å; L7-M11 HydrophobicContact CG-CE 4.02Å; L7-M11 HydrophobicContact CG-SD 4.44Å; L7-M11 WeakPolarHBondContact O-CG 3.05Å; L7-M11 PolarHBondContact O-N 3.02Å; L7-A23 HydrophobicContact CD1-CB 3.39Å; L7-A23 HydrophobicContact CD2-CB 3.18Å; L7-A23 HydrophobicContact CG-CB 3.79Å; L7-K27 HydrophobicContact CD1-CD 3.97Å; L7-M31 HydrophobicContact CB-CE 4.44Å; L7-M31 HydrophobicContact CB-SD 4.08Å
8	L	74.5	Confident	67.7	Low	35 Å²	35	89.1 Å²	89.1	18%	0.183	50%	0.499	C	S	.	.	H	α-helix	trans	-62.5	-35.4	177.3	-74.3	171.7	0	0	0	111.7	S6 M11 T12 L36 V44 I45	S6-L8 PolarHBondContact O-N 2.89Å; L8-M11 HydrophobicContact CB-CE 4.44Å; L8-M11 HydrophobicContact CD2-CE 3.32Å; L8-M11 HydrophobicContact CG-CE 4.05Å; L8-M11 PolarHBondContact O-N 2.99Å; L8-T12 WeakPolarHBondContact O-CG2 3.28Å; L8-T12 PolarHBondContact O-N 3.48Å; L8-T12 VanDerWaalsContact O-N 3.15Å; L8-T12 PolarHBondContact O-OG1 3.36Å; L8-L36 HydrophobicContact CD1-CD1 3.54Å; L8-L36 HydrophobicContact CD1-CG 4.23Å; L8-L36 HydrophobicContact CG-CD1 4.12Å; L8-V44 HydrophobicContact CD1-CB 4.49Å; L8-V44 HydrophobicContact CD2-CG1 4.3Å; L8-I45 HydrophobicContact CD1-CD1 4.09Å; L8-I45 HydrophobicContact CD1-CG1 4.35Å
9	Q	75.9	Confident	68.2	Low	71 Å²	71	87.8 Å²	87.8	33%	0.332	49%	0.488	S	S	.	.	H	α-helix	trans	-68.8	-37	174.1	-174.1	-178.4	-12	0	0	112.2	S6 L7 T12 F13 P40	S6-Q9 WeakPolarHBondContact O-CA 3.17Å; S6-Q9 VanDerWaalsContact O-CB 3.25Å; S6-Q9 WeakPolarHBondContact O-CB 3.47Å; S6-Q9 PolarHBondContact O-N 3.1Å; L7-Q9 VanDerWaalsContact C-N 3.26Å; L7-Q9 PolarHBondContact O-N 3.16Å; Q9-T12 PolarHBondContact O-N 3.41Å; Q9-T12 PolarHBondContact O-OG1 3.22Å; Q9-F13 PolarHBondContact O-N 2.99Å; Q9-P40 HydrophobicContact CB-CG 4.32Å; Q9-P40 VanDerWaalsContact CD-CG 3.46Å; Q9-P40 HydrophobicContact CG-CG 4.03Å
10	E	74.3	Confident	68.8	Low	46 Å²	46	88.6 Å²	88.6	22%	0.215	49%	0.489	C	S	.	.	H	α-helix	trans	-65.3	-42.1	173.6	-65.1	-175.7	147.7	0	0	111.1	T5 S6 L7 T12 F13 F19 K27	T5-E10 PolarHBondContact OG1-OE1 2.74Å; S6-E10 PolarHBondContact O-N 3.3Å; L7-E10 PolarHBondContact O-N 3.07Å; L7-E10 VanDerWaalsContact O-N 3.16Å; E10-T12 VanDerWaalsContact C-N 3.3Å; E10-T12 PolarHBondContact O-N 3.25Å; E10-F13 PolarHBondContact O-N 3.15Å; E10-F19 HydrophobicContact CB-CD1 3.93Å; E10-F19 HydrophobicContact CB-CE1 4.12Å; E10-F19 HydrophobicContact CB-CG 4.27Å; E10-K27 IonicContact OE2-NZ 2.87Å; E10-K27 PolarHBondContact OE2-NZ 3.38Å
11	M	77.3	Confident	69.4	Low	23 Å²	23	91.3 Å²	91.3	11%	0.113	50%	0.496	C	S	.	.	H	α-helix	trans	-65.2	-28.2	178.7	-74.3	-169.6	-60.1	0	0	113.9	L7 L8 T16 F19 M20	L7-M11 HydrophobicContact CD2-CE 4.04Å; L7-M11 HydrophobicContact CG-CE 4.02Å; L7-M11 HydrophobicContact CG-SD 4.44Å; L7-M11 WeakPolarHBondContact O-CG 3.05Å; L7-M11 PolarHBondContact O-N 3.02Å; L8-M11 HydrophobicContact CB-CE 4.44Å; L8-M11 HydrophobicContact CD2-CE 3.32Å; L8-M11 HydrophobicContact CG-CE 4.05Å; L8-M11 PolarHBondContact O-N 2.99Å; M11-T16 HydrophobicContact CB-CG2 4.26Å; M11-T16 WeakPolarHBondContact O-CB 3.47Å; M11-T16 PolarHBondContact O-OG1 3.35Å; M11-F19 HydrophobicContact CG-CB 3.66Å; M11-M20 HydrophobicContact SD-CB 3.75Å; M11-M20 HydrophobicContact SD-CG 4.18Å
12	T	78.6	Confident	71.5	Confident	98 Å²	98	82.5 Å²	82.5	60%	0.601	45%	0.454	S	S	*	.	H	α-helix	trans	-83.3	-20.6	176.4	54.6	0	0	0	0	113.6	L8 Q9 E10 V44	L8-T12 WeakPolarHBondContact O-CG2 3.28Å; L8-T12 PolarHBondContact O-N 3.48Å; L8-T12 VanDerWaalsContact O-N 3.15Å; L8-T12 PolarHBondContact O-OG1 3.36Å; Q9-T12 PolarHBondContact O-N 3.41Å; Q9-T12 PolarHBondContact O-OG1 3.22Å; E10-T12 VanDerWaalsContact C-N 3.3Å; E10-T12 PolarHBondContact O-N 3.25Å; T12-V44 HydrophobicContact CG2-CG2 4.4Å
13	F	75.4	Confident	73.5	Confident	164 Å²	164	76.4 Å²	76.4	72%	0.719	41%	0.412	S	S	*	.	H	α-helix	trans	-79.9	-58.2	-178.3	-175.8	-110.1	0	0	0	112	Q9 E10	Q9-F13 PolarHBondContact O-N 2.99Å; E10-F13 PolarHBondContact O-N 3.15Å
14	Q	70.4	Confident	74.9	Confident	118 Å²	118	74.7 Å²	74.7	55%	0.551	40%	0.404	S	S	*	.	S	Bend	trans	-152.2	148.5	-178.9	-69.6	-175	-4	0	0	111.7	T16 F19	Q14-T16 PolarHBondContact O-N 2.8Å; Q14-F19 WeakPolarHBondContact O-CD2 3.32Å; Q14-F19 WeakPolarHBondContact O-CE2 3.25Å
15	T	76.8	Confident	76.1	Confident	89 Å²	89	75.3 Å²	75.3	55%	0.546	40%	0.398	S	S	.	.			trans	50.5	53.1	171.5	-34.1	0	0	0	0	115.1	T17 A18 F19	T15-T17 PolarHBondContact O-N 3.03Å; T15-A18 HydrophobicContact CG2-CB 3.44Å; T15-A18 VanDerWaalsContact CG2-CB 3.44Å; T15-A18 PolarHBondContact O-N 3.45Å; T15-F19 PolarHBondContact O-N 2.95Å
16	T	80.9	Confident	76.5	Confident	79 Å²	79	77.3 Å²	77.3	49%	0.485	41%	0.407	S	S	.	.	H	α-helix	trans	-41.4	-46.1	-178	-49.7	0	0	0	0	113.8	M11 Q14 M20	M11-T16 HydrophobicContact CB-CG2 4.26Å; M11-T16 WeakPolarHBondContact O-CB 3.47Å; M11-T16 PolarHBondContact O-OG1 3.35Å; Q14-T16 PolarHBondContact O-N 2.8Å; T16-M20 VanDerWaalsContact O-CB 3.22Å; T16-M20 WeakPolarHBondContact O-CB 3.22Å; T16-M20 PolarHBondContact O-N 2.81Å
17	T	81.3	Confident	76.4	Confident	112 Å²	112	80 Å²	80	69%	0.687	42%	0.417	S	S	*	.	H	α-helix	trans	-70.8	-33	-176.6	53.1	0	0	0	0	113.8	T15 K21	T15-T17 PolarHBondContact O-N 3.03Å; T17-K21 WeakPolarHBondContact O-CB 3.19Å; T17-K21 PolarHBondContact O-N 3.39Å; T17-K21 VanDerWaalsContact O-N 3.07Å
18	A	80.2	Confident	76	Confident	54 Å²	54	84.7 Å²	84.7	45%	0.446	44%	0.442	S	S	.	.	H	α-helix	trans	-71.7	-45.2	177.4	0	0	0	0	0	110.8	T15 M20 K21 D22	T15-A18 HydrophobicContact CG2-CB 3.44Å; T15-A18 VanDerWaalsContact CG2-CB 3.44Å; T15-A18 PolarHBondContact O-N 3.45Å; A18-M20 VanDerWaalsContact C-N 3.34Å; A18-K21 PolarHBondContact O-N 3.5Å; A18-D22 WeakPolarHBondContact O-CB 3.37Å; A18-D22 PolarHBondContact O-N 2.82Å
19	F	77.1	Confident	75	Confident	66 Å²	66	89.3 Å²	89.3	29%	0.289	48%	0.475	S	S	.	.	H	α-helix	trans	-67	-35.3	175.6	-76.8	-76.3	0	0	0	112.3	E10 M11 Q14 T15 D22 A23	E10-F19 HydrophobicContact CB-CD1 3.93Å; E10-F19 HydrophobicContact CB-CE1 4.12Å; E10-F19 HydrophobicContact CB-CG 4.27Å; M11-F19 HydrophobicContact CG-CB 3.66Å; Q14-F19 WeakPolarHBondContact O-CD2 3.32Å; Q14-F19 WeakPolarHBondContact O-CE2 3.25Å; T15-F19 PolarHBondContact O-N 2.95Å; F19-D22 PolarHBondContact O-N 2.94Å; F19-A23 VanDerWaalsContact O-CB 3.28Å; F19-A23 WeakPolarHBondContact O-CB 3.32Å; F19-A23 PolarHBondContact O-N 3.46Å
20	M	79.3	Confident	74	Confident	102 Å²	102	92.5 Å²	92.5	50%	0.502	49%	0.493	S	S	.	.	H	α-helix	trans	-64.1	-41.5	174.2	-170.7	-178.6	-141.4	0	0	111.8	M11 T16 A18 A23 I24	M11-M20 HydrophobicContact SD-CB 3.75Å; M11-M20 HydrophobicContact SD-CG 4.18Å; T16-M20 VanDerWaalsContact O-CB 3.22Å; T16-M20 WeakPolarHBondContact O-CB 3.22Å; T16-M20 PolarHBondContact O-N 2.81Å; A18-M20 VanDerWaalsContact C-N 3.34Å; M20-A23 WeakPolarHBondContact O-CB 3.33Å; M20-A23 PolarHBondContact O-N 3.31Å; M20-I24 HydrophobicContact CG-CD1 4.13Å; M20-I24 WeakPolarHBondContact O-CD1 3.27Å; M20-I24 VanDerWaalsContact O-CG1 3.27Å; M20-I24 WeakPolarHBondContact O-CG1 3.46Å; M20-I24 PolarHBondContact O-N 3.42Å; M20-I24 VanDerWaalsContact O-N 3.12Å
21	K	82.3	Confident	73.4	Confident	146 Å²	146	93.3 Å²	93.3	64%	0.635	50%	0.498	S	S	*	.	H	α-helix	trans	-65.7	-43.8	176.8	-166.8	-178.1	-179.3	-177.6	0	111.3	T17 A18 A23 I24 L25	T17-K21 WeakPolarHBondContact O-CB 3.19Å; T17-K21 PolarHBondContact O-N 3.39Å; T17-K21 VanDerWaalsContact O-N 3.07Å; A18-K21 PolarHBondContact O-N 3.5Å; K21-A23 VanDerWaalsContact C-N 3.32Å; K21-A23 PolarHBondContact O-N 3.16Å; K21-I24 PolarHBondContact O-N 3.12Å; K21-L25 HydrophobicContact CG-CD1 4.1Å; K21-L25 VanDerWaalsContact O-CG 3.32Å; K21-L25 WeakPolarHBondContact O-CG 3.37Å; K21-L25 PolarHBondContact O-N 3.37Å; K21-L25 VanDerWaalsContact O-N 3.16Å
22	D	79.1	Confident	72.6	Confident	61 Å²	61	97.8 Å²	97.8	33%	0.326	52%	0.522	S	S	.	.	H	α-helix	trans	-61.6	-41.3	175.4	-172.1	62.7	0	0	0	111.7	A18 F19 I24 L25 N26	A18-D22 WeakPolarHBondContact O-CB 3.37Å; A18-D22 PolarHBondContact O-N 2.82Å; F19-D22 PolarHBondContact O-N 2.94Å; D22-I24 PolarHBondContact O-N 2.9Å; D22-L25 PolarHBondContact O-N 3.25Å; D22-N26 VanDerWaalsContact O-CB 3.32Å; D22-N26 WeakPolarHBondContact O-CB 3.41Å; D22-N26 PolarHBondContact O-N 3.38Å; D22-N26 PolarHBondContact OD1-ND2 2.92Å
23	A	75.4	Confident	71.9	Confident	2 Å²	2	98.4 Å²	98.4	2%	0.017	53%	0.526	C	S	.	.	I	π-helix	trans	-56.3	-50.3	175.8	0	0	0	0	0	113.4	L7 F19 M20 K21 L25 K27 L28	L7-A23 HydrophobicContact CD1-CB 3.39Å; L7-A23 HydrophobicContact CD2-CB 3.18Å; L7-A23 HydrophobicContact CG-CB 3.79Å; F19-A23 VanDerWaalsContact O-CB 3.28Å; F19-A23 WeakPolarHBondContact O-CB 3.32Å; F19-A23 PolarHBondContact O-N 3.46Å; M20-A23 WeakPolarHBondContact O-CB 3.33Å; M20-A23 PolarHBondContact O-N 3.31Å; K21-A23 VanDerWaalsContact C-N 3.32Å; K21-A23 PolarHBondContact O-N 3.16Å; A23-L25 VanDerWaalsContact C-N 3.27Å; A23-L25 PolarHBondContact O-N 3.18Å; A23-K27 PolarHBondContact O-N 2.87Å; A23-L28 PolarHBondContact O-N 3.44Å
24	I	78.1	Confident	71.1	Confident	108 Å²	108	97.2 Å²	97.2	55%	0.554	52%	0.522	S	S	*	.	I	π-helix	trans	-65.2	-37.7	-176.5	-67.8	165.3	0	0	0	110	M20 K21 D22 L28	M20-I24 HydrophobicContact CG-CD1 4.13Å; M20-I24 WeakPolarHBondContact O-CD1 3.27Å; M20-I24 VanDerWaalsContact O-CG1 3.27Å; M20-I24 WeakPolarHBondContact O-CG1 3.46Å; M20-I24 PolarHBondContact O-N 3.42Å; M20-I24 VanDerWaalsContact O-N 3.12Å; K21-I24 PolarHBondContact O-N 3.12Å; D22-I24 PolarHBondContact O-N 2.9Å; I24-L28 HydrophobicContact CB-CD1 4.32Å; I24-L28 HydrophobicContact CG1-CD1 3.82Å
25	L	79.1	Confident	70.6	Confident	122 Å²	122	96.2 Å²	96.2	64%	0.639	52%	0.521	S	S	*	.	I	π-helix	trans	-80.7	-36.3	-177.9	-67.3	173.1	0	0	0	113.3	K21 D22 A23	K21-L25 HydrophobicContact CG-CD1 4.1Å; K21-L25 VanDerWaalsContact O-CG 3.32Å; K21-L25 WeakPolarHBondContact O-CG 3.37Å; K21-L25 PolarHBondContact O-N 3.37Å; K21-L25 VanDerWaalsContact O-N 3.16Å; D22-L25 PolarHBondContact O-N 3.25Å; A23-L25 VanDerWaalsContact C-N 3.27Å; A23-L25 PolarHBondContact O-N 3.18Å
26	N	71.8	Confident	69.8	Low	100 Å²	100	94.2 Å²	94.2	54%	0.535	51%	0.507	S	S	.	.	I	π-helix	trans	-121.3	-26.2	-164.8	-65.6	-40.9	0	0	0	115.2	D22	D22-N26 VanDerWaalsContact O-CB 3.32Å; D22-N26 WeakPolarHBondContact O-CB 3.41Å; D22-N26 PolarHBondContact O-N 3.38Å; D22-N26 PolarHBondContact OD1-ND2 2.92Å
27	K	65.8	Low	68.7	Low	63 Å²	63	93 Å²	93	27%	0.274	50%	0.497	S	S	.	.	I	π-helix	trans	-115.5	-29	-167.8	-63.2	-173.3	-178.9	-178.7	0	114.5	L7 E10 A23 C29 I30 M31	L7-K27 HydrophobicContact CD1-CD 3.97Å; E10-K27 IonicContact OE2-NZ 2.87Å; E10-K27 PolarHBondContact OE2-NZ 3.38Å; A23-K27 PolarHBondContact O-N 2.87Å; K27-C29 PolarHBondContact O-N 3.23Å; K27-C29 VanDerWaalsContact O-N 3.13Å; K27-I30 PolarHBondContact O-N 3.04Å; K27-I30 VanDerWaalsContact O-N 3.12Å; K27-M31 HydrophobicContact CB-CG 4.45Å; K27-M31 HydrophobicContact CB-SD 4.23Å; K27-M31 PolarHBondContact O-N 3.13Å
28	L	62.4	Low	67.5	Low	119 Å²	119	93.5 Å²	93.5	62%	0.623	50%	0.495	S	S	*	.	T	Hydrogen-bonded Turn	trans	-64.4	-18.7	-175.5	-113	141.6	0	0	0	114.6	A23 I24	A23-L28 PolarHBondContact O-N 3.44Å; I24-L28 HydrophobicContact CB-CD1 4.32Å; I24-L28 HydrophobicContact CG1-CD1 3.82Å
29	C	53.1	Low	66.6	Low	132 Å²	132	92.3 Å²	92.3	89%	0.892	48%	0.482	S	S	*	.	T	Hydrogen-bonded Turn	trans	-91.6	-8.1	178.4	-153.1	0	0	0	0	113.9	K27	K27-C29 PolarHBondContact O-N 3.23Å; K27-C29 VanDerWaalsContact O-N 3.13Å
30	I	56.4	Low	65.8	Low	139 Å²	139	92.7 Å²	92.7	71%	0.713	49%	0.491	S	S	*	.	T	Hydrogen-bonded Turn	trans	-123	-19.9	-173.3	-56.2	170	0	0	0	111.5	K27 D32	K27-I30 PolarHBondContact O-N 3.04Å; K27-I30 VanDerWaalsContact O-N 3.12Å; I30-D32 PolarHBondContact O-N 3.12Å
31	M	60.2	Low	65.2	Low	63 Å²	63	87.9 Å²	87.9	31%	0.31	47%	0.468	S	S	.	.			trans	-75.9	110.7	178.6	-77	-173.8	72.8	0	0	111.4	L7 K27	L7-M31 HydrophobicContact CB-CE 4.44Å; L7-M31 HydrophobicContact CB-SD 4.08Å; K27-M31 HydrophobicContact CB-CG 4.45Å; K27-M31 HydrophobicContact CB-SD 4.23Å; K27-M31 PolarHBondContact O-N 3.13Å
32	D	60.5	Low	64.7	Low	117 Å²	117	81.1 Å²	81.1	63%	0.626	44%	0.44	S	S	*	.			trans	-60.9	136.3	163	-77	-49.4	0	0	0	109.4	I30 E34 D35	I30-D32 PolarHBondContact O-N 3.12Å; D32-E34 PolarHBondContact O-N 3.37Å; D32-D35 PolarHBondContact O-N 2.93Å
33	V	63.5	Low	64.7	Low	111 Å²	111	83 Å²	83	67%	0.673	45%	0.453	S	S	*	.	H	α-helix	trans	-54.5	-27.9	178.9	176.8	0	0	0	0	111.1	D35 L36 L37	V33-D35 PolarHBondContact O-N 3.1Å; V33-L36 WeakPolarHBondContact O-CB 3.3Å; V33-L36 PolarHBondContact O-N 2.84Å; V33-L37 WeakPolarHBondContact O-CG 3.08Å
34	E	58.5	Low	64.9	Low	138 Å²	138	87 Å²	87	65%	0.645	48%	0.478	S	S	*	.	H	α-helix	trans	-65.4	-34.5	179.6	-59.5	-117.5	108.5	0	0	113	D32 L36 L37	D32-E34 PolarHBondContact O-N 3.37Å; E34-L36 PolarHBondContact O-N 3.15Å; E34-L37 VanDerWaalsContact O-CB 3.28Å; E34-L37 WeakPolarHBondContact O-CB 3.39Å; E34-L37 PolarHBondContact O-N 2.91Å
35	D	61.3	Low	65	Low	97 Å²	97	86.2 Å²	86.2	52%	0.519	47%	0.473	S	S	.	.	H	α-helix	trans	-69	-26.7	177.6	-85.7	-21.1	0	0	0	112.1	D32 V33 L37 T39	D32-D35 PolarHBondContact O-N 2.93Å; V33-D35 PolarHBondContact O-N 3.1Å; D35-L37 PolarHBondContact O-N 2.76Å; D35-T39 PolarHBondContact O-OG1 3.07Å
36	L	59.7	Low	65.1	Low	48 Å²	48	83.8 Å²	83.8	25%	0.251	48%	0.478	S	S	.	.	H	α-helix	trans	-66.3	-25.6	173	-159.6	65.4	0	0	0	112.3	L8 V33 E34 S41 I45	L8-L36 HydrophobicContact CD1-CD1 3.54Å; L8-L36 HydrophobicContact CD1-CG 4.23Å; L8-L36 HydrophobicContact CG-CD1 4.12Å; V33-L36 WeakPolarHBondContact O-CB 3.3Å; V33-L36 PolarHBondContact O-N 2.84Å; E34-L36 PolarHBondContact O-N 3.15Å; L36-S41 PolarHBondContact O-OG 3.25Å; L36-I45 HydrophobicContact CD2-CD1 3.66Å; L36-I45 HydrophobicContact CG-CD1 3.91Å
37	L	57.4	Low	65.5	Low	54 Å²	54	84.9 Å²	84.9	28%	0.283	47%	0.474	S	S	.	.	H	α-helix	trans	-81	-29.1	-175.3	-55.5	179.5	0	0	0	112.9	V33 E34 D35 R47	V33-L37 WeakPolarHBondContact O-CG 3.08Å; E34-L37 VanDerWaalsContact O-CB 3.28Å; E34-L37 WeakPolarHBondContact O-CB 3.39Å; E34-L37 PolarHBondContact O-N 2.91Å; D35-L37 PolarHBondContact O-N 2.76Å; L37-R47 VanDerWaalsContact CD2-NH1 3.28Å
38	N	57.5	Low	66.3	Low	121 Å²	121	87.8 Å²	87.8	65%	0.647	49%	0.492	S	S	*	.	S	Bend	trans	-89.4	0.7	-170.8	-69.4	-32.9	0	0	0	114.6
39	T	60.5	Low	67.2	Low	29 Å²	29	84.6 Å²	84.6	18%	0.178	48%	0.479	C	S	.	.	S	Bend	trans	-118.3	163.7	-171.6	19	0	0	0	0	111.3	S6 D35 S41 G42	S6-T39 VanDerWaalsContact CB-CB 3.43Å; S6-T39 WeakPolarHBondContact CB-OG1 3.28Å; S6-T39 WeakPolarHBondContact OG-CB 3.5Å; S6-T39 PolarHBondContact OG-OG1 3.26Å; D35-T39 PolarHBondContact O-OG1 3.07Å; T39-S41 VanDerWaalsContact CB-OG 3.3Å; T39-S41 WeakPolarHBondContact CB-OG 3.49Å; T39-S41 PolarHBondContact O-N 3.31Å; T39-S41 PolarHBondContact O-OG 3.35Å; T39-S41 VanDerWaalsContact O-OG 3.1Å; T39-S41 PolarHBondContact OG1-OG 3.34Å; T39-G42 PolarHBondContact O-N 3.24Å
40	P	60.4	Low	68.5	Low	74 Å²	74	84 Å²	84	48%	0.481	46%	0.462	S	S	.	.	T	Hydrogen-bonded Turn	trans	-60.7	-3.8	178.7	26.3	-35.7	0	0	0	113.9	Q9 G42 V43	Q9-P40 HydrophobicContact CB-CG 4.32Å; Q9-P40 VanDerWaalsContact CD-CG 3.46Å; Q9-P40 HydrophobicContact CG-CG 4.03Å; P40-G42 PolarHBondContact O-N 3.25Å; P40-V43 PolarHBondContact O-N 3.39Å
41	S	66.6	Low	69.8	Low	2 Å²	2	82.8 Å²	82.8	1%	0.014	46%	0.462	C	S	.	.	T	Hydrogen-bonded Turn	trans	-50.4	-27.8	162.5	38.3	0	0	0	0	114.8	S6 L36 T39 V43 V44 I45	S6-S41 PolarHBondContact OG-OG 2.87Å; L36-S41 PolarHBondContact O-OG 3.25Å; T39-S41 VanDerWaalsContact CB-OG 3.3Å; T39-S41 WeakPolarHBondContact CB-OG 3.49Å; T39-S41 PolarHBondContact O-N 3.31Å; T39-S41 PolarHBondContact O-OG 3.35Å; T39-S41 VanDerWaalsContact O-OG 3.1Å; T39-S41 PolarHBondContact OG1-OG 3.34Å; S41-V43 PolarHBondContact O-N 3.49Å; S41-V43 VanDerWaalsContact O-N 3.15Å; S41-V44 WeakPolarHBondContact O-CB 3.22Å; S41-V44 PolarHBondContact O-N 2.97Å; S41-I45 PolarHBondContact O-N 3.45Å
42	G	70.5	Confident	71.1	Confident	4 Å²	4	82.4 Å²	82.4	4%	0.041	47%	0.474	C	S	.	.	H	α-helix	trans	-53.7	-34.8	177.7	0	0	0	0	0	112.9	T39 P40 V44 I45 G46 R47	T39-G42 PolarHBondContact O-N 3.24Å; P40-G42 PolarHBondContact O-N 3.25Å; G42-V44 VanDerWaalsContact C-N 3.32Å; G42-V44 PolarHBondContact O-N 3.49Å; G42-I45 CarbonylContact O-C 3.51Å; G42-I45 PolarHBondContact O-N 3.02Å; G42-I45 VanDerWaalsContact O-N 3.11Å; G42-G46 PolarHBondContact O-N 3.04Å; G42-R47 CarbonylContact C-O 3.58Å; G42-R47 PolarHBondContact O-N 3.02Å
43	V	79.4	Confident	72.5	Confident	100 Å²	100	82 Å²	82	61%	0.606	48%	0.476	S	S	*	.	H	α-helix	trans	-63.2	-37.6	177.7	-178.1	0	0	0	0	111.8	P40 S41 I45 G46	P40-V43 PolarHBondContact O-N 3.39Å; S41-V43 PolarHBondContact O-N 3.49Å; S41-V43 VanDerWaalsContact O-N 3.15Å; V43-I45 PolarHBondContact O-N 3.21Å; V43-G46 PolarHBondContact O-N 3.39Å
44	V	81	Confident	73.5	Confident	87 Å²	87	77.3 Å²	77.3	53%	0.527	45%	0.45	S	S	.	.	H	α-helix	trans	-65.5	-29.8	177.8	-177.8	0	0	0	0	111.3	L8 T12 S41 G42	L8-V44 HydrophobicContact CD1-CB 4.49Å; L8-V44 HydrophobicContact CD2-CG1 4.3Å; T12-V44 HydrophobicContact CG2-CG2 4.4Å; S41-V44 WeakPolarHBondContact O-CB 3.22Å; S41-V44 PolarHBondContact O-N 2.97Å; G42-V44 VanDerWaalsContact C-N 3.32Å; G42-V44 PolarHBondContact O-N 3.49Å
45	I	79.8	Confident	74.8	Confident	90 Å²	90	73.3 Å²	73.3	46%	0.462	44%	0.436	S	S	.	.	H	α-helix	trans	-95.4	-4.9	-178	-54.4	170.1	0	0	0	111.4	L8 L36 S41 G42 V43 R47	L8-I45 HydrophobicContact CD1-CD1 4.09Å; L8-I45 HydrophobicContact CD1-CG1 4.35Å; L36-I45 HydrophobicContact CD2-CD1 3.66Å; L36-I45 HydrophobicContact CG-CD1 3.91Å; S41-I45 PolarHBondContact O-N 3.45Å; G42-I45 CarbonylContact O-C 3.51Å; G42-I45 PolarHBondContact O-N 3.02Å; G42-I45 VanDerWaalsContact O-N 3.11Å; V43-I45 PolarHBondContact O-N 3.21Å; I45-R47 HydrophobicContact CG2-CG 4.45Å
46	G	81.1	Confident	76.2	Confident	71 Å²	71	74.7 Å²	74.7	73%	0.732	44%	0.438	S	S	*	.	T	Hydrogen-bonded Turn	trans	77.2	18.7	-176.4	0	0	0	0	0	114.5	G42 V43	G42-G46 PolarHBondContact O-N 3.04Å; V43-G46 PolarHBondContact O-N 3.39Å
47	R	80	Confident	77.5	Confident	123 Å²	123	79.7 Å²	79.7	46%	0.464	47%	0.465	S	S	.	.	P	Polyproline II helix	trans	-85.2	149.9	172.3	-66.5	-168.3	76.7	-137.3	5.5	111.4	L37 G42 I45 P49	L37-R47 VanDerWaalsContact CD2-NH1 3.28Å; G42-R47 CarbonylContact C-O 3.58Å; G42-R47 PolarHBondContact O-N 3.02Å; I45-R47 HydrophobicContact CG2-CG 4.45Å; R47-P49 WeakPolarHBondContact O-CD 3.42Å
48	L	83.6	Confident	79.1	Confident	125 Å²	125	83 Å²	83	65%	0.654	48%	0.482	S	S	*	.	P	Polyproline II helix	trans	-63.4	122.3	170.9	-173.5	70	0	0	0	109	G54	L48-G54 VanDerWaalsContact CD2-CA 3.5Å
49	P	79.7	Confident	80.8	Confident	52 Å²	52	85 Å²	85	34%	0.338	49%	0.492	S	S	.	.	P	Polyproline II helix	trans	-64.7	141.6	177.9	25.6	-33.7	0	0	0	110.3	R47 V51 G54	R47-P49 WeakPolarHBondContact O-CD 3.42Å; P49-V51 PolarHBondContact O-N 3.25Å; P49-G54 WeakPolarHBondContact O-CA 3.41Å
50	H	80.9	Confident	82.3	Confident	118 Å²	118	93.4 Å²	93.4	55%	0.546	52%	0.521	S	S	.	.	S	Bend	trans	-77.1	55.7	176.7	-164.2	-85.5	0	0	0	111.4	G54 C55	H50-G54 PolarHBondContact CD2-O 3.3Å; H50-G54 VanDerWaalsContact CD2-O 3.3Å; H50-C55 WeakPolarHBondContact NE2-CA 3.47Å; H50-C55 PolarHBondContact NE2-O 3.33Å; H50-C55 PolarHBondContact O-SG 2.99Å
51	V	83.7	Confident	83.7	Confident	115 Å²	115	97.4 Å²	97.4	70%	0.697	54%	0.538	S	S	*	.	S	Bend	trans	-136.7	133.4	177.5	-177.7	0	0	0	0	108.6	P49 T53 G54 C55	P49-V51 PolarHBondContact O-N 3.25Å; V51-T53 PolarHBondContact O-N 2.8Å; V51-G54 PolarHBondContact O-N 2.82Å; V51-C55 VanDerWaalsContact C-SG 3.58Å; V51-C55 WeakPolarHBondContact CA-SG 3.5Å; V51-C55 PolarHBondContact N-SG 3.4Å
52	G	88	Confident	84.7	Confident	55 Å²	55	105.5 Å²	105.5	57%	0.567	58%	0.58	S	S	*	*	G	3₁₀ helix	trans	67.4	-120.1	-179.2	0	0	0	0	0	112	G54 C55	G52-G54 PolarHBondContact O-N 3.31Å; G52-C55 PolarHBondContact N-SG 3.11Å; G52-C55 VanDerWaalsContact N-SG 3.39Å; G52-C55 WeakPolarHBondContact O-CB 3.44Å; G52-C55 PolarHBondContact O-N 3.43Å
53	T	89.1	Confident	85.3	Confident	109 Å²	109	118.9 Å²	118.9	67%	0.669	63%	0.631	S	S	*	*	G	3₁₀ helix	trans	-69.4	-18.2	-178.6	55.4	0	0	0	0	113.7	V51 C55	V51-T53 PolarHBondContact O-N 2.8Å; T53-C55 VanDerWaalsContact C-N 3.27Å
54	G	84.6	Confident	85.5	Confident	12 Å²	12	119.8 Å²	119.8	12%	0.124	63%	0.632	C	S	.	*	G	3₁₀ helix	trans	-83.5	2.6	175.5	0	0	0	0	0	114.5	L48 P49 H50 V51 G52 F56	L48-G54 VanDerWaalsContact CD2-CA 3.5Å; P49-G54 WeakPolarHBondContact O-CA 3.41Å; H50-G54 PolarHBondContact CD2-O 3.3Å; H50-G54 VanDerWaalsContact CD2-O 3.3Å; V51-G54 PolarHBondContact O-N 2.82Å; G52-G54 PolarHBondContact O-N 3.31Å; G54-F56 VanDerWaalsContact C-N 3.26Å; G54-F56 PolarHBondContact O-N 3.45Å
55	C	86.8	Confident	85.8	Confident	54 Å²	54	121.5 Å²	121.5	37%	0.365	64%	0.638	S	S	.	*	G	3₁₀ helix	trans	-82.5	3.4	179.5	-64.7	0	0	0	0	114.5	H50 V51 G52 T53	H50-C55 WeakPolarHBondContact NE2-CA 3.47Å; H50-C55 PolarHBondContact NE2-O 3.33Å; H50-C55 PolarHBondContact O-SG 2.99Å; V51-C55 VanDerWaalsContact C-SG 3.58Å; V51-C55 WeakPolarHBondContact CA-SG 3.5Å; V51-C55 PolarHBondContact N-SG 3.4Å; G52-C55 PolarHBondContact N-SG 3.11Å; G52-C55 VanDerWaalsContact N-SG 3.39Å; G52-C55 WeakPolarHBondContact O-CB 3.44Å; G52-C55 PolarHBondContact O-N 3.43Å; T53-C55 VanDerWaalsContact C-N 3.27Å
56	F	89.2	Confident	86.1	Confident	126 Å²	126	123.3 Å²	123.3	55%	0.553	65%	0.648	S	S	*	*	S	Bend	trans	-152.9	147.2	-179.8	56.6	-90.2	0	0	0	110.5	G54 I58	G54-F56 VanDerWaalsContact C-N 3.26Å; G54-F56 PolarHBondContact O-N 3.45Å; F56-I58 HydrophobicContact CD2-CG1 4.34Å; F56-I58 HydrophobicContact CE2-CG1 4.21Å
57	D	88.9	Confident	86.4	Confident	152 Å²	152	126.4 Å²	126.4	81%	0.813	64%	0.643	S	S	*	*	P	Polyproline II helix	trans	-92.4	144.3	171.7	-68.4	-50.9	0	0	0	110.4
58	I	90.6	Very high	86.8	Confident	125 Å²	125	126.6 Å²	126.6	64%	0.641	65%	0.654	S	S	*	*	P	Polyproline II helix	trans	-97.1	116.3	173	-59.4	173.9	0	0	0	107.7	F56 Y60	F56-I58 HydrophobicContact CD2-CG1 4.34Å; F56-I58 HydrophobicContact CE2-CG1 4.21Å; I58-Y60 HydrophobicContact CG2-CE2 4.24Å
59	L	92.8	Very high	87	Confident	163 Å²	163	126.7 Å²	126.7	85%	0.853	65%	0.654	S	S	*	*	P	Polyproline II helix	trans	-102.6	126.8	176.5	-68.8	155.3	0	0	0	109.3
60	Y	91.2	Very high	87.6	Confident	205 Å²	205	132 Å²	132	80%	0.804	68%	0.677	S	S	*	*	P	Polyproline II helix	trans	-90.7	130.5	172.1	-72.4	-83.2	0	0	0	110.2	I58 L62	I58-Y60 HydrophobicContact CG2-CE2 4.24Å; Y60-L62 PolarHBondContact O-N 3.38Å
61	L	90.2	Very high	88.1	Confident	158 Å²	158	133.1 Å²	133.1	83%	0.827	69%	0.687	S	S	*	*			trans	-78.4	113.1	173.6	-142.6	96.7	0	0	0	109
62	L	88.5	Confident	88.4	Confident	172 Å²	172	134.6 Å²	134.6	90%	0.901	69%	0.686	S	S	*	*			trans	-83	112.3	168.9	-70.4	166.8	0	0	0	108	Y60	Y60-L62 PolarHBondContact O-N 3.38Å
63	Y	81.4	Confident	88.5	Confident	284 Å²	284	141.8 Å²	141.8	100%	1.114	70%	0.697	S	S	*	*			trans	-98.1	0	171	51.7	-100.5	0	0	0	111.2

Retrieved 63 of 63 residues in 33.3 ms (Link to these results)

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