A0A077Z6M7_TRITR Loading...

DNA-directed RNA polymerase subunit

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

AlphaFold DB , UniProt , Accession A0A077Z6M7, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 108 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M72.9Confident88.7Confident154 Ų15486.6 Ų86.676%0.75946%0.462SS*.  0128.90-165.317293.900109.3V38 S40M1-V38 HydrophobicContact CE-CG1 3.59Å; M1-V38 HydrophobicContact SD-CG1 3.99Å; M1-S40 PolarHBondContact N-OG 2.94Å; M1-S40 VanDerWaalsContact N-OG 3.15Å
2L83.3Confident89Confident114 Ų11481 Ų8160%0.59743%0.432SS*.  trans-96.5126.5172.1-171.765.3000108.1F4L2-F4 HydrophobicContact CD2-CE1 3.87Å; L2-F4 HydrophobicContact CD2-CE2 4.14Å; L2-F4 HydrophobicContact CD2-CZ 3.41Å; L2-F4 VanDerWaalsContact CD2-CZ 3.41Å; L2-F4 HydrophobicContact CG-CE1 4.26Å; L2-F4 HydrophobicContact CG-CE2 4.2Å; L2-F4 HydrophobicContact CG-CZ 3.87Å
3S86Confident89.2Confident26 Ų2679.3 Ų79.318%0.18243%0.426CS..  trans-107.6142178.6-570000109.5L12S3-L12 PolarHBondContact O-N 2.91Å
4F92.9Very high89.4Confident123 Ų12379.9 Ų79.954%0.53943%0.428SS..BIsolated β-bridgetrans-115.2147-178.5-61.3-83.5000110.7L2 S9 N10L2-F4 HydrophobicContact CD2-CE1 3.87Å; L2-F4 HydrophobicContact CD2-CE2 4.14Å; L2-F4 HydrophobicContact CD2-CZ 3.41Å; L2-F4 VanDerWaalsContact CD2-CZ 3.41Å; L2-F4 HydrophobicContact CG-CE1 4.26Å; L2-F4 HydrophobicContact CG-CE2 4.2Å; L2-F4 HydrophobicContact CG-CZ 3.87Å; F4-S9 WeakPolarHBondContact CD1-O 3.34Å; F4-N10 CarbonylContact C-O 3.57Å; F4-N10 WeakPolarHBondContact CA-O 3.29Å
5C93Very high89.4Confident3 Ų378.2 Ų78.22%0.0242%0.417CS..  trans-67134.5174.4-177.50000110.2Y7 C8 S9 N10 L12 C25 C28C5-Y7 PolarHBondContact O-N 3.34Å; C5-Y7 PolarHBondContact SG-N 3.41Å; C5-Y7 VanDerWaalsContact SG-N 3.44Å; C5-C8 VanDerWaalsContact CB-SG 3.53Å; C5-C8 VanDerWaalsContact SG-SG 3.65Å; C5-S9 VanDerWaalsContact O-CA 3.23Å; C5-S9 WeakPolarHBondContact O-CA 3.31Å; C5-S9 PolarHBondContact O-N 2.95Å; C5-N10 PolarHBondContact N-O 3.42Å; C5-L12 HydrophobicContact CB-CD2 3.77Å; C5-C25 HydrophobicContact CB-CB 4.27Å; C5-C28 PolarHBondContact SG-SG 3.07Å
6P90.4Very high89.4Confident84 Ų8483.1 Ų83.155%0.54543%0.434SS..THydrogen-bonded Turntrans-68.1-19.9177.527.3-34.9000113.5Y30P6-Y30 HydrophobicContact CG-CD2 4.32Å; P6-Y30 HydrophobicContact CG-CE2 3.91Å
7Y91.4Very high89.2Confident185 Ų18585.4 Ų85.473%0.72544%0.435SS*.THydrogen-bonded Turntrans-96.9-41.4-173.3-60.3-67.9000114C5 Y30C5-Y7 PolarHBondContact O-N 3.34Å; C5-Y7 PolarHBondContact SG-N 3.41Å; C5-Y7 VanDerWaalsContact SG-N 3.44Å; Y7-Y30 HydrophobicContact CD2-CD2 4.01Å; Y7-Y30 HydrophobicContact CD2-CG 4.41Å; Y7-Y30 AromaticContact CE2-CD2 3.71Å; Y7-Y30 HydrophobicContact CE2-CD2 3.71Å; Y7-Y30 HydrophobicContact CE2-CE2 4.27Å
8C92.4Very high89Confident43 Ų4390.5 Ų90.529%0.29146%0.464SS..THydrogen-bonded Turntrans-116.10.3-177.562.50000113.6C5 N10 C25C5-C8 VanDerWaalsContact CB-SG 3.53Å; C5-C8 VanDerWaalsContact SG-SG 3.65Å; C8-N10 PolarHBondContact O-N 3.11Å; C8-C25 PolarHBondContact SG-SG 3.32Å
9S89.6Confident88.8Confident89 Ų8991.3 Ų91.362%0.62248%0.478SS*.  trans56.611.5-177.5-55.10000115.2F4 C5F4-S9 WeakPolarHBondContact CD1-O 3.34Å; C5-S9 VanDerWaalsContact O-CA 3.23Å; C5-S9 WeakPolarHBondContact O-CA 3.31Å; C5-S9 PolarHBondContact O-N 2.95Å
10N91.6Very high88.8Confident72 Ų7289.6 Ų89.639%0.38547%0.47SS..PPolyproline II helixtrans-75.3152.1174.3-75.2-27.1000111.5F4 C5 C8 L12 S27F4-N10 CarbonylContact C-O 3.57Å; F4-N10 WeakPolarHBondContact CA-O 3.29Å; C5-N10 PolarHBondContact N-O 3.42Å; C8-N10 PolarHBondContact O-N 3.11Å; N10-L12 PolarHBondContact O-N 3.1Å; N10-S27 WeakPolarHBondContact ND2-CB 3.33Å; N10-S27 PolarHBondContact ND2-OG 3.41Å
11S92.4Very high88.9Confident60 Ų6087.2 Ų87.242%0.4246%0.459SS..BIsolated β-bridgetrans-61.7131.7173.355.40000110.5
12L92.6Very high89.8Confident19 Ų1982.1 Ų82.110%0.09943%0.432CS..PPolyproline II helixtrans-77.7137.3173-59.5174.4000109.8S3 C5 N10 L23 S24 C25 Y30S3-L12 PolarHBondContact O-N 2.91Å; C5-L12 HydrophobicContact CB-CD2 3.77Å; N10-L12 PolarHBondContact O-N 3.1Å; L12-L23 HydrophobicContact CB-CB 3.96Å; L12-L23 HydrophobicContact CB-CD2 4.33Å; L12-L23 HydrophobicContact CD1-CB 3.92Å; L12-L23 HydrophobicContact CD1-CD1 4.34Å; L12-L23 HydrophobicContact CG-CB 4.5Å; L12-S24 CarbonylContact C-O 3.51Å; L12-S24 WeakPolarHBondContact CA-O 3.35Å; L12-C25 HydrophobicContact CD2-CB 3.81Å; L12-Y30 HydrophobicContact CD1-CD1 4.35Å; L12-Y30 HydrophobicContact CD1-CE1 3.83Å; L12-Y30 HydrophobicContact CD2-CD1 3.7Å; L12-Y30 HydrophobicContact CD2-CE1 4.04Å
13V91.6Very high90.2Very high59 Ų5977.8 Ų77.836%0.35841%0.409SS..EExtended strand (participates in β ladder)trans-97.7146.4176.2-179.10000108.5L23 S24 Q26V13-L23 CarbonylContact O-C 3.5Å; V13-L23 WeakPolarHBondContact O-CA 3.49Å; V13-S24 PolarHBondContact N-O 3.21Å; V13-S24 PolarHBondContact O-N 3.46Å; V13-Q26 HydrophobicContact CG2-CG 3.9Å
14L91Very high90.5Very high87 Ų8776.8 Ų76.846%0.45540%0.402SS..EExtended strand (participates in β ladder)trans-89.4119.1-178.6-153.9151.5000108.7F16 T21 Y22 L23 I34L14-F16 HydrophobicContact CD2-CD1 4.15Å; L14-F16 HydrophobicContact CD2-CD2 4.26Å; L14-F16 HydrophobicContact CD2-CE1 3.46Å; L14-F16 VanDerWaalsContact CD2-CE1 3.46Å; L14-F16 HydrophobicContact CD2-CE2 3.6Å; L14-F16 HydrophobicContact CD2-CZ 3.16Å; L14-T21 HydrophobicContact CD2-CG2 3.32Å; L14-T21 HydrophobicContact CG-CG2 3.94Å; L14-Y22 CarbonylContact C-O 3.51Å; L14-Y22 WeakPolarHBondContact CA-O 3.36Å; L14-L23 HydrophobicContact CB-CD2 4.35Å; L14-L23 HydrophobicContact CD1-CD2 4.45Å; L14-L23 HydrophobicContact CG-CD2 4.28Å; L14-I34 HydrophobicContact CD1-CD1 4.35Å; L14-I34 HydrophobicContact CG-CD1 4.38Å
15E89.7Confident90.5Very high55 Ų5571.5 Ų71.526%0.25738%0.38SS..EExtended strand (participates in β ladder)trans-114.4135.1178.9-81.6-179.1-160.600110R17 T21 Y22 S24E15-R17 IonicContact OE2-CZ 3.69Å; E15-R17 IonicContact OE2-NE 2.76Å; E15-R17 PolarHBondContact OE2-NE 3.18Å; E15-R17 IonicContact OE2-NH2 3.96Å; E15-R17 PolarHBondContact OE2-NH2 3.31Å; E15-T21 CarbonylContact O-C 3.51Å; E15-Y22 PolarHBondContact N-O 3.31Å; E15-Y22 PolarHBondContact O-N 2.8Å; E15-S24 WeakPolarHBondContact CG-OG 3.3Å; E15-S24 VanDerWaalsContact OE1-CB 3.3Å; E15-S24 WeakPolarHBondContact OE1-CB 3.31Å; E15-S24 PolarHBondContact OE1-OG 2.96Å
16F89.7Confident90.4Very high157 Ų15777.9 Ų77.969%0.68941%0.41SS*.EExtended strand (participates in β ladder)trans-104.4120.9173.2-56.7-80.1000108.5L14 T21L14-F16 HydrophobicContact CD2-CD1 4.15Å; L14-F16 HydrophobicContact CD2-CD2 4.26Å; L14-F16 HydrophobicContact CD2-CE1 3.46Å; L14-F16 VanDerWaalsContact CD2-CE1 3.46Å; L14-F16 HydrophobicContact CD2-CE2 3.6Å; L14-F16 HydrophobicContact CD2-CZ 3.16Å; F16-T21 HydrophobicContact CD1-CG2 3.87Å; F16-T21 HydrophobicContact CE1-CG2 3.74Å
17R86.3Confident90.4Very high121 Ų12177.8 Ų77.846%0.45741%0.411SS..EExtended strand (participates in β ladder)trans-121.8109.6176.8-62.4-177.9-172-176.60.9108E15 S19 D20 Y22E15-R17 IonicContact OE2-CZ 3.69Å; E15-R17 IonicContact OE2-NE 2.76Å; E15-R17 PolarHBondContact OE2-NE 3.18Å; E15-R17 IonicContact OE2-NH2 3.96Å; E15-R17 PolarHBondContact OE2-NH2 3.31Å; R17-S19 PolarHBondContact O-N 3.11Å; R17-D20 PolarHBondContact N-O 2.86Å; R17-D20 PolarHBondContact O-N 3.2Å; R17-Y22 HydrophobicContact CB-CD2 4.13Å; R17-Y22 HydrophobicContact CB-CE2 4.06Å; R17-Y22 HydrophobicContact CG-CD2 4.11Å; R17-Y22 HydrophobicContact CG-CE2 4.42Å
18D85.9Confident90.4Very high178 Ų17870.3 Ų70.395%0.95239%0.386SS*.THydrogen-bonded Turntrans52.6-104.9-175.6-55.3-44.1000112.6
19S84.2Confident90.2Very high105 Ų10574.9 Ų74.973%0.73442%0.415SS*.THydrogen-bonded Turntrans-96.1-10.6178.157.10000114.2R17R17-S19 PolarHBondContact O-N 3.11Å
20D89.3Confident90.3Very high58 Ų5873.7 Ų73.731%0.3140%0.397SS..EExtended strand (participates in β ladder)trans-110.9146.1-166.5-70.4-3.8000111.3R17 Y22 H33R17-D20 PolarHBondContact N-O 2.86Å; R17-D20 PolarHBondContact O-N 3.2Å; D20-Y22 HydrophobicContact CB-CD2 4.33Å; D20-Y22 HydrophobicContact CB-CE2 3.51Å; D20-H33 IonicContact OD1-NE2 2.98Å; D20-H33 IonicContact OD2-CE1 3.33Å; D20-H33 PolarHBondContact OD2-CE1 2.87Å; D20-H33 IonicContact OD2-NE2 3.01Å
21T89.9Confident90.2Very high39 Ų3973.2 Ų73.224%0.23940%0.399CS..EExtended strand (participates in β ladder)trans-110.3130.4179.6-53.20000110.4L14 E15 F16 H33 I34L14-T21 HydrophobicContact CD2-CG2 3.32Å; L14-T21 HydrophobicContact CG-CG2 3.94Å; E15-T21 CarbonylContact O-C 3.51Å; F16-T21 HydrophobicContact CD1-CG2 3.87Å; F16-T21 HydrophobicContact CE1-CG2 3.74Å; T21-H33 PolarHBondContact O-CD2 3.3Å; T21-I34 HydrophobicContact CG2-CD1 3.69Å; T21-I34 HydrophobicContact CG2-CG1 4.41Å; T21-I34 WeakPolarHBondContact O-CB 3.42Å; T21-I34 PolarHBondContact O-N 3.48Å
22Y91.8Very high90.1Very high47 Ų4775.6 Ų75.618%0.18440%0.4CS..EExtended strand (participates in β ladder)trans-119.9151.2-177.8-68.2-95.6000111.4L14 E15 R17 D20 Y32 H33L14-Y22 CarbonylContact C-O 3.51Å; L14-Y22 WeakPolarHBondContact CA-O 3.36Å; E15-Y22 PolarHBondContact N-O 3.31Å; E15-Y22 PolarHBondContact O-N 2.8Å; R17-Y22 HydrophobicContact CB-CD2 4.13Å; R17-Y22 HydrophobicContact CB-CE2 4.06Å; R17-Y22 HydrophobicContact CG-CD2 4.11Å; R17-Y22 HydrophobicContact CG-CE2 4.42Å; D20-Y22 HydrophobicContact CB-CD2 4.33Å; D20-Y22 HydrophobicContact CB-CE2 3.51Å; Y22-Y32 CarbonylContact C-O 3.57Å; Y22-Y32 VanDerWaalsContact CA-O 3.28Å; Y22-Y32 WeakPolarHBondContact CA-O 3.24Å; Y22-H33 HydrophobicContact CD1-CB 3.96Å; Y22-H33 HydrophobicContact CE1-CB 3.57Å; Y22-H33 AromaticContact CE1-CG 3.94Å
23L91.6Very high90.1Very high23 Ų2377.2 Ų77.212%0.1241%0.407CS..EExtended strand (participates in β ladder)trans-103.9107.2161.9-70.2175000107.9L12 V13 L14 S31 Y32 I34L12-L23 HydrophobicContact CB-CB 3.96Å; L12-L23 HydrophobicContact CB-CD2 4.33Å; L12-L23 HydrophobicContact CD1-CB 3.92Å; L12-L23 HydrophobicContact CD1-CD1 4.34Å; L12-L23 HydrophobicContact CG-CB 4.5Å; V13-L23 CarbonylContact O-C 3.5Å; V13-L23 WeakPolarHBondContact O-CA 3.49Å; L14-L23 HydrophobicContact CB-CD2 4.35Å; L14-L23 HydrophobicContact CD1-CD2 4.45Å; L14-L23 HydrophobicContact CG-CD2 4.28Å; L23-S31 CarbonylContact O-C 3.59Å; L23-S31 WeakPolarHBondContact O-CA 3.28Å; L23-Y32 HydrophobicContact CD1-CD1 4.31Å; L23-Y32 PolarHBondContact N-O 2.77Å; L23-Y32 PolarHBondContact O-N 2.82Å; L23-I34 HydrophobicContact CD1-CD1 4.25Å; L23-I34 HydrophobicContact CD1-CG1 4.29Å; L23-I34 HydrophobicContact CD2-CD1 4.05Å; L23-I34 HydrophobicContact CG-CD1 3.7Å; L23-I34 HydrophobicContact CG-CG1 3.91Å
24S92.4Very high89.9Confident5 Ų576 Ų764%0.03540%0.398CS..EExtended strand (participates in β ladder)trans-104.6149.7179.3650000111.1L12 V13 E15 Y30L12-S24 CarbonylContact C-O 3.51Å; L12-S24 WeakPolarHBondContact CA-O 3.35Å; V13-S24 PolarHBondContact N-O 3.21Å; V13-S24 PolarHBondContact O-N 3.46Å; E15-S24 WeakPolarHBondContact CG-OG 3.3Å; E15-S24 VanDerWaalsContact OE1-CB 3.3Å; E15-S24 WeakPolarHBondContact OE1-CB 3.31Å; E15-S24 PolarHBondContact OE1-OG 2.96Å; S24-Y30 WeakPolarHBondContact CA-O 3.16Å
25C93.4Very high89.6Confident12 Ų1282.2 Ų82.28%0.08142%0.415CS..  trans-94.9139.5167.8-171.70000110.2C5 C8 L12 S27 C28 Y30C5-C25 HydrophobicContact CB-CB 4.27Å; C8-C25 PolarHBondContact SG-SG 3.32Å; L12-C25 HydrophobicContact CD2-CB 3.81Å; C25-S27 VanDerWaalsContact C-N 3.34Å; C25-S27 PolarHBondContact SG-N 3.31Å; C25-S27 VanDerWaalsContact SG-N 3.42Å; C25-C28 VanDerWaalsContact CB-SG 3.55Å; C25-C28 VanDerWaalsContact O-O 3.06Å; C25-C28 VanDerWaalsContact SG-SG 3.65Å; C25-Y30 PolarHBondContact N-O 2.85Å
26Q90.1Very high89.3Confident137 Ų13788.6 Ų88.664%0.6444%0.437SS*.SBendtrans-79.4-16.9176-63.8-67.1-4.600113.3V13V13-Q26 HydrophobicContact CG2-CG 3.9Å
27S90.8Very high88.9Confident83 Ų8389.7 Ų89.758%0.5844%0.444SS*.SBendtrans-108.3-16.7-174.3-49.40000113.8N10 C25N10-S27 WeakPolarHBondContact ND2-CB 3.33Å; N10-S27 PolarHBondContact ND2-OG 3.41Å; C25-S27 VanDerWaalsContact C-N 3.34Å; C25-S27 PolarHBondContact SG-N 3.31Å; C25-S27 VanDerWaalsContact SG-N 3.42Å
28C91.3Very high88.5Confident28 Ų2887.5 Ų87.519%0.18944%0.444CS..SBendtrans-141.8160178.975.50000110.2C5 C25 Y30C5-C28 PolarHBondContact SG-SG 3.07Å; C25-C28 VanDerWaalsContact CB-SG 3.55Å; C25-C28 VanDerWaalsContact O-O 3.06Å; C25-C28 VanDerWaalsContact SG-SG 3.65Å; C28-Y30 PolarHBondContact O-N 2.9Å; C28-Y30 VanDerWaalsContact SG-CB 3.52Å
29P89Confident88.3Confident139 Ų13983.6 Ų83.690%0.90343%0.431SS*.SBendtrans-73.918.6-176.131.5-36.7000113.9S31P29-S31 PolarHBondContact O-N 3.4Å
30Y91.8Very high88.2Confident63 Ų6381.7 Ų81.725%0.24742%0.417CS..  trans-71.8124.7178.6-179.2-99000110.8P6 Y7 L12 S24 C25 C28P6-Y30 HydrophobicContact CG-CD2 4.32Å; P6-Y30 HydrophobicContact CG-CE2 3.91Å; Y7-Y30 HydrophobicContact CD2-CD2 4.01Å; Y7-Y30 HydrophobicContact CD2-CG 4.41Å; Y7-Y30 AromaticContact CE2-CD2 3.71Å; Y7-Y30 HydrophobicContact CE2-CD2 3.71Å; Y7-Y30 HydrophobicContact CE2-CE2 4.27Å; L12-Y30 HydrophobicContact CD1-CD1 4.35Å; L12-Y30 HydrophobicContact CD1-CE1 3.83Å; L12-Y30 HydrophobicContact CD2-CD1 3.7Å; L12-Y30 HydrophobicContact CD2-CE1 4.04Å; S24-Y30 WeakPolarHBondContact CA-O 3.16Å; C25-Y30 PolarHBondContact N-O 2.85Å; C28-Y30 PolarHBondContact O-N 2.9Å; C28-Y30 VanDerWaalsContact SG-CB 3.52Å
31S90Very high87.9Confident62 Ų6283.4 Ų83.443%0.43443%0.433SS..EExtended strand (participates in β ladder)trans-133.8132.1172630000110.3L23 P29L23-S31 CarbonylContact O-C 3.59Å; L23-S31 WeakPolarHBondContact O-CA 3.28Å; P29-S31 PolarHBondContact O-N 3.4Å
32Y89.9Confident87.7Confident110 Ų11087.4 Ų87.443%0.43146%0.457SS..EExtended strand (participates in β ladder)trans-119.9123.5177.6177.3-96.3000110.8Y22 L23 I34Y22-Y32 CarbonylContact C-O 3.57Å; Y22-Y32 VanDerWaalsContact CA-O 3.28Å; Y22-Y32 WeakPolarHBondContact CA-O 3.24Å; L23-Y32 HydrophobicContact CD1-CD1 4.31Å; L23-Y32 PolarHBondContact N-O 2.77Å; L23-Y32 PolarHBondContact O-N 2.82Å; Y32-I34 PolarHBondContact O-N 2.9Å
33H91.7Very high87.5Confident53 Ų5394.3 Ų94.325%0.24549%0.485CS..EExtended strand (participates in β ladder)trans-78.1119.2177.3-176.5-176.7000110.8D20 T21 Y22 R35D20-H33 IonicContact OD1-NE2 2.98Å; D20-H33 IonicContact OD2-CE1 3.33Å; D20-H33 PolarHBondContact OD2-CE1 2.87Å; D20-H33 IonicContact OD2-NE2 3.01Å; T21-H33 PolarHBondContact O-CD2 3.3Å; Y22-H33 HydrophobicContact CD1-CB 3.96Å; Y22-H33 HydrophobicContact CE1-CB 3.57Å; Y22-H33 AromaticContact CE1-CG 3.94Å; H33-R35 PolarHBondContact O-N 3.09Å
34I88.6Confident87.1Confident33 Ų3399 Ų9917%0.16952%0.517CS..  trans-77.295.6173.3-50.2-179.3000109.9L14 T21 L23 Y32 R36 V38L14-I34 HydrophobicContact CD1-CD1 4.35Å; L14-I34 HydrophobicContact CG-CD1 4.38Å; T21-I34 HydrophobicContact CG2-CD1 3.69Å; T21-I34 HydrophobicContact CG2-CG1 4.41Å; T21-I34 WeakPolarHBondContact O-CB 3.42Å; T21-I34 PolarHBondContact O-N 3.48Å; L23-I34 HydrophobicContact CD1-CD1 4.25Å; L23-I34 HydrophobicContact CD1-CG1 4.29Å; L23-I34 HydrophobicContact CD2-CD1 4.05Å; L23-I34 HydrophobicContact CG-CD1 3.7Å; L23-I34 HydrophobicContact CG-CG1 3.91Å; Y32-I34 PolarHBondContact O-N 2.9Å; I34-R36 WeakPolarHBondContact CG2-O 3.35Å; I34-V38 HydrophobicContact CG2-CG2 4.1Å
35R85Confident86.8Confident219 Ų219108.4 Ų108.483%0.82656%0.557SS**  trans-83.9-15.4177.6-63.8-175.3-179.4-177.8-0.6114.9H33H33-R35 PolarHBondContact O-N 3.09Å
36R83Confident86.3Confident189 Ų189116.1 Ų116.171%0.71359%0.594SS**SBendtrans-130.1146.9-175.262.9178.5-178.7144.7-0.2109.7I34 V38I34-R36 WeakPolarHBondContact CG2-O 3.35Å; R36-V38 HydrophobicContact CG-CG2 4.48Å; R36-V38 PolarHBondContact O-N 3.31Å; R36-V38 VanDerWaalsContact O-N 3.15Å
37Q80.7Confident85.9Confident179 Ų179118.5 Ų118.584%0.83660%0.602SS**  trans-58.6122171.1-173.7177.6-200109.4
38V77.9Confident85.2Confident75 Ų75123 Ų12346%0.45561%0.614SS.*  trans-103.9101.5175-178.10000107.6M1 I34 R36M1-V38 HydrophobicContact CE-CG1 3.59Å; M1-V38 HydrophobicContact SD-CG1 3.99Å; I34-V38 HydrophobicContact CG2-CG2 4.1Å; R36-V38 HydrophobicContact CG-CG2 4.48Å; R36-V38 PolarHBondContact O-N 3.31Å; R36-V38 VanDerWaalsContact O-N 3.15Å
39S83Confident84.3Confident97 Ų97129.2 Ų129.268%0.67864%0.644SS**  trans-115.6137.8172.559.90000109.8
40S80.2Confident83.3Confident64 Ų64125.2 Ų125.245%0.44863%0.627SS.*  trans-134.7111.8171.465.80000106.9M1M1-S40 PolarHBondContact N-OG 2.94Å; M1-S40 VanDerWaalsContact N-OG 3.15Å
41C84.6Confident82.3Confident94 Ų94126 Ų12664%0.63564%0.636SS**  trans-103.8121.4169.2-167.50000107.6
42T85Confident81.3Confident123 Ų123129.4 Ų129.476%0.75565%0.654SS**  trans-119.6122.8172.1-53.40000107P44T42-P44 VanDerWaalsContact O-CD 3.22Å; T42-P44 WeakPolarHBondContact O-CD 3.39Å
43Y86.7Confident80.3Confident192 Ų192125.4 Ų125.475%0.75364%0.64SS**  trans-86.3107.6174.3-63-82.6000107.8K45Y43-K45 PolarHBondContact O-N 3.37Å; Y43-K45 VanDerWaalsContact O-N 3.16Å
44P84.7Confident79.2Confident123 Ų123123.9 Ų123.980%0.79964%0.638SS**PPolyproline II helixtrans-61.1123.3175.325.7-32.2000108T42T42-P44 VanDerWaalsContact O-CD 3.22Å; T42-P44 WeakPolarHBondContact O-CD 3.39Å
45K85.4Confident78.5Confident201 Ų201124 Ų12487%0.87465%0.648SS**PPolyproline II helixtrans-70.7137.1168.9-67.6-174.4179.5-177.30107.7Y43 K47Y43-K45 PolarHBondContact O-N 3.37Å; Y43-K45 VanDerWaalsContact O-N 3.16Å; K45-K47 PolarHBondContact O-N 3.15Å
46M82.6Confident77.8Confident175 Ų175117.5 Ų117.586%0.86263%0.633SS**PPolyproline II helixtrans-57125.5171-171169.6-129.400108E48M46-E48 PolarHBondContact O-N 2.96Å
47K81.1Confident77.3Confident186 Ų186112.4 Ų112.481%0.80963%0.626SS**PPolyproline II helixtrans-61.6130.7172.9-174.7178.4178.4-179.70107.5K45 I49K45-K47 PolarHBondContact O-N 3.15Å; K47-I49 PolarHBondContact O-N 3.02Å
48E77.8Confident76.9Confident179 Ų179106.6 Ų106.684%0.83661%0.608SS**PPolyproline II helixtrans-58.3129.9172.4-66.6-177.9177.400108.9M46 G50M46-E48 PolarHBondContact O-N 2.96Å; E48-G50 VanDerWaalsContact C-N 3.32Å; E48-G50 PolarHBondContact O-N 2.89Å
49I71.7Confident76.9Confident158 Ų158103.1 Ų103.181%0.8159%0.587SS**  trans-71.995.4178.3-56.7170.9000106.2K47K47-I49 PolarHBondContact O-N 3.02Å
50G68.4Low76.6Confident54 Ų54104.7 Ų104.756%0.55758%0.584SS**  trans-64.5149.4171.600000110.9E48 V52E48-G50 VanDerWaalsContact C-N 3.32Å; E48-G50 PolarHBondContact O-N 2.89Å; G50-V52 PolarHBondContact O-N 2.96Å; G50-V52 VanDerWaalsContact O-N 3.17Å
51D69.8Low76.6Confident81 Ų81109 Ų10943%0.43360%0.602SS.*  trans-64115.8172.9-169-11.6000109.1L53 G54 G55 R105D51-L53 PolarHBondContact O-N 2.99Å; D51-L53 PolarHBondContact OD1-N 3.09Å; D51-G54 PolarHBondContact O-N 2.82Å; D51-G54 VanDerWaalsContact OD2-C 3.23Å; D51-G55 PolarHBondContact OD2-N 2.98Å; D51-R105 IonicContact OD1-NH1 3.49Å; D51-R105 PolarHBondContact OD1-NH1 3.18Å; D51-R105 IonicContact OD2-CZ 3.95Å; D51-R105 IonicContact OD2-NH1 3.85Å; D51-R105 PolarHBondContact OD2-NH1 3.03Å; D51-R105 IonicContact OD2-NH2 3.19Å; D51-R105 PolarHBondContact OD2-NH2 2.86Å
52V69Low76.6Confident133 Ų133105.7 Ų105.781%0.80658%0.581SS**THydrogen-bonded Turntrans-60.9-29.5-174.8178.20000111.9G50G50-V52 PolarHBondContact O-N 2.96Å; G50-V52 VanDerWaalsContact O-N 3.17Å
53L69.5Low76.7Confident25 Ų25106.3 Ų106.313%0.13158%0.575CS.*THydrogen-bonded Turntrans-107.710.8179-59.7177000112.4D51 W59 M80 L82 F94D51-L53 PolarHBondContact O-N 2.99Å; D51-L53 PolarHBondContact OD1-N 3.09Å; L53-W59 HydrophobicContact CB-CZ2 4.19Å; L53-W59 HydrophobicContact CD1-CZ2 4.35Å; L53-W59 PolarHBondContact O-NE1 2.8Å; L53-M80 HydrophobicContact CB-SD 4.23Å; L53-M80 HydrophobicContact CD2-CE 4.39Å; L53-M80 HydrophobicContact CD2-SD 3.94Å; L53-L82 HydrophobicContact CD2-CD1 3.31Å; L53-F94 HydrophobicContact CD1-CB 4.41Å; L53-F94 HydrophobicContact CD1-CD1 3.7Å; L53-F94 HydrophobicContact CD1-CE1 4.17Å; L53-F94 HydrophobicContact CD1-CG 4.12Å; L53-F94 HydrophobicContact CD2-CD1 4.31Å; L53-F94 HydrophobicContact CD2-CD2 4.24Å; L53-F94 HydrophobicContact CD2-CE1 4.48Å; L53-F94 HydrophobicContact CD2-CE2 4.43Å; L53-F94 HydrophobicContact CD2-CG 4.17Å
54G69.7Low76.9Confident21 Ų21102.5 Ų102.522%0.21656%0.564CS.*  trans68.5153.3-173.800000113.5D51 R105D51-G54 PolarHBondContact O-N 2.82Å; D51-G54 VanDerWaalsContact OD2-C 3.23Å; G54-R105 PolarHBondContact O-NH2 2.87Å
55G72.9Confident77.2Confident37 Ų3798.4 Ų98.438%0.38154%0.537SS..  trans-66-163.817700000112.8D51 S57 A58D51-G55 PolarHBondContact OD2-N 2.98Å; G55-S57 PolarHBondContact O-N 3.46Å; G55-S57 VanDerWaalsContact O-N 3.12Å; G55-A58 PolarHBondContact O-N 3.28Å; G55-A58 VanDerWaalsContact O-N 3.12Å
56V69.4Low77.4Confident82 Ų8295.5 Ų95.550%0.49753%0.531SS..G310 helixtrans-54-39.5-176.2179.10000112.4A58 W59 R96V56-A58 VanDerWaalsContact C-N 3.33Å; V56-A58 PolarHBondContact O-N 3.28Å; V56-W59 PolarHBondContact O-N 3.36Å; V56-R96 PolarHBondContact O-NH1 3.41Å; V56-R96 VanDerWaalsContact O-NH1 3.14Å
57S72.7Confident77.7Confident81 Ų8191.5 Ų91.557%0.56651%0.511SS*.G310 helixtrans-65.5-27.3-177.6-45.90000114.8G55 W59 E60G55-S57 PolarHBondContact O-N 3.46Å; G55-S57 VanDerWaalsContact O-N 3.12Å; S57-W59 PolarHBondContact O-N 3.12Å; S57-E60 PolarHBondContact O-N 3.14Å
58A74.1Confident78.1Confident57 Ų5789.9 Ų89.947%0.47150%0.499SS..G310 helixtrans-67.8-23.6179.400000112.4G55 V56G55-A58 PolarHBondContact O-N 3.28Å; G55-A58 VanDerWaalsContact O-N 3.12Å; V56-A58 VanDerWaalsContact C-N 3.33Å; V56-A58 PolarHBondContact O-N 3.28Å
59W77.5Confident78.7Confident3 Ų381.4 Ų81.41%0.01146%0.46CS..G310 helixtrans-95.5-9.2-178.4-61.779.3000113.4L53 V56 S57 N61 A62 M80 F94 R96L53-W59 HydrophobicContact CB-CZ2 4.19Å; L53-W59 HydrophobicContact CD1-CZ2 4.35Å; L53-W59 PolarHBondContact O-NE1 2.8Å; V56-W59 PolarHBondContact O-N 3.36Å; S57-W59 PolarHBondContact O-N 3.12Å; W59-N61 PolarHBondContact O-N 3.12Å; W59-A62 HydrophobicContact CE3-CB 4.15Å; W59-A62 WeakPolarHBondContact O-CB 3.39Å; W59-A62 PolarHBondContact O-N 2.89Å; W59-A62 VanDerWaalsContact O-N 3.09Å; W59-M80 HydrophobicContact CH2-CG 3.68Å; W59-M80 HydrophobicContact CH2-SD 3.64Å; W59-M80 HydrophobicContact CZ2-CG 4.28Å; W59-M80 HydrophobicContact CZ2-SD 3.59Å; W59-M80 VanDerWaalsContact CZ2-SD 3.59Å; W59-M80 HydrophobicContact CZ3-CB 4.42Å; W59-M80 HydrophobicContact CZ3-CG 3.99Å; W59-M80 HydrophobicContact CZ3-SD 4.22Å; W59-F94 HydrophobicContact CH2-CB 4.16Å; W59-R96 VanDerWaalsContact CD1-NH1 3.3Å; W59-R96 HydrophobicContact CD2-CB 3.72Å; W59-R96 VanDerWaalsContact CD2-CD 3.44Å; W59-R96 HydrophobicContact CD2-CG 4.23Å; W59-R96 HydrophobicContact CE3-CB 3.46Å; W59-R96 VanDerWaalsContact CE3-CB 3.46Å; W59-R96 HydrophobicContact CE3-CG 4.39Å; W59-R96 VanDerWaalsContact CG-NH1 3.32Å; W59-R96 HydrophobicContact CH2-CB 3.72Å; W59-R96 HydrophobicContact CZ2-CB 3.99Å; W59-R96 HydrophobicContact CZ3-CB 3.46Å; W59-R96 VanDerWaalsContact CZ3-CB 3.46Å
60E76.3Confident79.6Confident130 Ų13078.1 Ų78.161%0.60745%0.449SS*.THydrogen-bonded Turntrans-63.2-30.3178.9-70.8172.7-171.800111.8S57S57-E60 PolarHBondContact O-N 3.14Å
61N79.4Confident80.7Confident154 Ų15482.9 Ų82.982%0.82445%0.454SS*.THydrogen-bonded Turntrans-98.44.7176.7-59.5-57.7000113W59W59-N61 PolarHBondContact O-N 3.12Å
62A85.3Confident81.7Confident25 Ų2581.4 Ų81.421%0.20745%0.45CS..SBendtrans-75.3150.5179.800000110.8W59 Y78W59-A62 HydrophobicContact CE3-CB 4.15Å; W59-A62 WeakPolarHBondContact O-CB 3.39Å; W59-A62 PolarHBondContact O-N 2.89Å; W59-A62 VanDerWaalsContact O-N 3.09Å; A62-Y78 HydrophobicContact CB-CD1 4.27Å; A62-Y78 HydrophobicContact CB-CG 4.46Å
63Q87.9Confident82.6Confident135 Ų13577.7 Ų77.763%0.63143%0.43SS*.EExtended strand (participates in β ladder)trans-72.6145.9176.6-68.3-177.9-25.800110.4Y78 F79Q63-Y78 CarbonylContact O-C 3.6Å; Q63-Y78 VanDerWaalsContact O-CA 3.31Å; Q63-Y78 WeakPolarHBondContact O-CA 3.49Å; Q63-F79 HydrophobicContact CB-CD1 4.07Å; Q63-F79 HydrophobicContact CB-CE1 3.39Å; Q63-F79 HydrophobicContact CB-CZ 3.7Å; Q63-F79 VanDerWaalsContact O-CD1 3.29Å; Q63-F79 WeakPolarHBondContact O-CD1 3.3Å; Q63-F79 PolarHBondContact O-N 3.11Å
64Q89.3Confident83.5Confident112 Ų11280 Ų8052%0.52344%0.44SS..EExtended strand (participates in β ladder)trans-96.2143.4177.6-168.1176.826.700110.4T76 A77Q64-T76 PolarHBondContact NE2-OG1 3.19Å; Q64-A77 CarbonylContact C-O 3.56Å; Q64-A77 WeakPolarHBondContact CA-O 3.35Å
65T91.2Very high84.5Confident38 Ų3884 Ų8423%0.23346%0.456CS..EExtended strand (participates in β ladder)trans-132.6160.1173.1-173.20000110.5E67 T76 A77 F79 Y95T65-E67 HydrophobicContact CG2-CB 3.81Å; T65-E67 HydrophobicContact CG2-CG 3.56Å; T65-E67 PolarHBondContact O-N 2.96Å; T65-E67 VanDerWaalsContact O-N 3.1Å; T65-T76 WeakPolarHBondContact O-CA 3.46Å; T65-A77 HydrophobicContact CG2-CB 4.41Å; T65-A77 WeakPolarHBondContact CG2-O 3.23Å; T65-A77 PolarHBondContact N-O 2.91Å; T65-A77 PolarHBondContact O-N 2.85Å; T65-F79 HydrophobicContact CG2-CB 4.33Å; T65-F79 HydrophobicContact CG2-CD1 3.92Å; T65-F79 HydrophobicContact CG2-CG 4.48Å; T65-Y95 HydrophobicContact CG2-CD1 4.13Å; T65-Y95 HydrophobicContact CG2-CE1 3.83Å
66N89.9Confident85.3Confident139 Ų13983.6 Ų83.674%0.74345%0.446SS*.  trans-85.343.2178.4-65.5-26.9000111.9D75N66-D75 CarbonylContact C-O 3.58Å; N66-D75 VanDerWaalsContact C-O 3.25Å; N66-D75 VanDerWaalsContact CA-O 3.31Å; N66-D75 WeakPolarHBondContact CA-O 2.87Å
67E88.5Confident86.3Confident92 Ų9279.7 Ų79.743%0.4342%0.422SS..PPolyproline II helixtrans-92.2130.8176.2-70.5-62.8161.500110.5T65 T76 A77 Y95T65-E67 HydrophobicContact CG2-CB 3.81Å; T65-E67 HydrophobicContact CG2-CG 3.56Å; T65-E67 PolarHBondContact O-N 2.96Å; T65-E67 VanDerWaalsContact O-N 3.1Å; E67-T76 CarbonylContact O-C 3.25Å; E67-A77 HydrophobicContact CB-CB 4.24Å; E67-Y95 HydrophobicContact CB-CE1 4.48Å; E67-Y95 HydrophobicContact CG-CE1 3.96Å
68R90.1Very high87.2Confident152 Ų15278.5 Ų78.557%0.57441%0.406SS*.PPolyproline II helixtrans-81.9126.6-174.4-170.9169.1168.4-178.6-5111.3S73 H74R68-S73 PolarHBondContact NE-O 2.82Å; R68-S73 PolarHBondContact NE-OG 3.01Å; R68-S73 VanDerWaalsContact NH2-CB 3.26Å; R68-S73 PolarHBondContact NH2-OG 3.05Å; R68-H74 CarbonylContact C-O 3.54Å; R68-H74 VanDerWaalsContact CA-O 3.3Å; R68-H74 WeakPolarHBondContact CA-O 3.22Å
69C90.9Very high88Confident0 Ų077.9 Ų77.90%039%0.393CS..PPolyproline II helixtrans-64.8126.6178175.90000111.2K71 C72 S73 H74 C97 W106C69-K71 PolarHBondContact O-N 3.12Å; C69-K71 PolarHBondContact SG-N 3.32Å; C69-C72 VanDerWaalsContact SG-SG 3.66Å; C69-S73 WeakPolarHBondContact O-CA 3.41Å; C69-S73 PolarHBondContact O-N 3.35Å; C69-H74 HydrophobicContact CB-CB 4.43Å; C69-H74 PolarHBondContact N-O 2.81Å; C69-C97 HydrophobicContact CB-CB 4.05Å; C69-W106 HydrophobicContact CB-CH2 3.97Å; C69-W106 HydrophobicContact CB-CZ3 4.17Å
70P90.6Very high88.5Confident90 Ų9080 Ų8058%0.58440%0.404SS*.THydrogen-bonded Turntrans-67.4-21.4-178.426.3-34.7000113.2W106P70-W106 HydrophobicContact CG-CD2 4.27Å; P70-W106 HydrophobicContact CG-CE3 4.42Å; P70-W106 HydrophobicContact CG-CG 4.48Å
71K89.9Confident89.1Confident153 Ų15378.7 Ų78.767%0.66540%0.397SS*.THydrogen-bonded Turntrans-91.2-50.2-176.3-171.8175.9-179.5-176.30113.5C69 H104C69-K71 PolarHBondContact O-N 3.12Å; C69-K71 PolarHBondContact SG-N 3.32Å; K71-H104 HydrophobicContact CB-CB 4.3Å; K71-H104 HydrophobicContact CD-CB 4.23Å
72C91.2Very high89.6Confident50 Ų5074.1 Ų74.134%0.33837%0.373SS..THydrogen-bonded Turntrans-110.21.9-176.572.10000113.7C69 H74 C97 C102C69-C72 VanDerWaalsContact SG-SG 3.66Å; C72-H74 PolarHBondContact O-N 3.03Å; C72-H74 VanDerWaalsContact O-N 3.11Å; C72-C97 PolarHBondContact SG-SG 3.22Å; C72-C102 HydrophobicContact CB-CB 4.07Å
73S87.7Confident89.7Confident56 Ų5677.1 Ų77.139%0.39238%0.382SS..  trans58.321.8179.9-78.90000115R68 C69R68-S73 PolarHBondContact NE-O 2.82Å; R68-S73 PolarHBondContact NE-OG 3.01Å; R68-S73 VanDerWaalsContact NH2-CB 3.26Å; R68-S73 PolarHBondContact NH2-OG 3.05Å; C69-S73 WeakPolarHBondContact O-CA 3.41Å; C69-S73 PolarHBondContact O-N 3.35Å
74H88.8Confident89.6Confident74 Ų7474.4 Ų74.434%0.34338%0.375SS..  trans-71137.5174.9-16961.7000110.2R68 C69 C72 T76 N99R68-H74 CarbonylContact C-O 3.54Å; R68-H74 VanDerWaalsContact CA-O 3.3Å; R68-H74 WeakPolarHBondContact CA-O 3.22Å; C69-H74 HydrophobicContact CB-CB 4.43Å; C69-H74 PolarHBondContact N-O 2.81Å; C72-H74 PolarHBondContact O-N 3.03Å; C72-H74 VanDerWaalsContact O-N 3.11Å; H74-T76 VanDerWaalsContact C-N 3.27Å; H74-T76 PolarHBondContact CD2-O 2.98Å; H74-T76 VanDerWaalsContact CD2-O 3.31Å; H74-T76 PolarHBondContact CD2-OG1 3.49Å; H74-T76 PolarHBondContact NE2-OG1 3.17Å; H74-T76 VanDerWaalsContact NE2-OG1 3.11Å; H74-T76 PolarHBondContact O-N 3.01Å; H74-N99 HydrophobicContact CB-CB 4.42Å
75D91Very high89.5Confident105 Ų10575.3 Ų75.356%0.56137%0.373SS*.SBendtrans-78.4-6.9-169.9-65.9-36.8000114.6N66N66-D75 CarbonylContact C-O 3.58Å; N66-D75 VanDerWaalsContact C-O 3.25Å; N66-D75 VanDerWaalsContact CA-O 3.31Å; N66-D75 WeakPolarHBondContact CA-O 2.87Å
76T90.1Very high89.4Confident27 Ų2776.6 Ų76.617%0.16638%0.384CS..  trans-125.3143.3179.268.50000113Q64 T65 E67 H74 A98Q64-T76 PolarHBondContact NE2-OG1 3.19Å; T65-T76 WeakPolarHBondContact O-CA 3.46Å; E67-T76 CarbonylContact O-C 3.25Å; H74-T76 VanDerWaalsContact C-N 3.27Å; H74-T76 PolarHBondContact CD2-O 2.98Å; H74-T76 VanDerWaalsContact CD2-O 3.31Å; H74-T76 PolarHBondContact CD2-OG1 3.49Å; H74-T76 PolarHBondContact NE2-OG1 3.17Å; H74-T76 VanDerWaalsContact NE2-OG1 3.11Å; H74-T76 PolarHBondContact O-N 3.01Å; T76-A98 WeakPolarHBondContact O-CB 3.37Å; T76-A98 PolarHBondContact O-N 2.97Å; T76-A98 WeakPolarHBondContact OG1-CB 3.35Å
77A90.7Very high89.3Confident0 Ų074.6 Ų74.60%039%0.387CS..EExtended strand (participates in β ladder)trans-136.4146.6177.200000110Q64 T65 E67 Y95 R96 W106Q64-A77 CarbonylContact C-O 3.56Å; Q64-A77 WeakPolarHBondContact CA-O 3.35Å; T65-A77 HydrophobicContact CG2-CB 4.41Å; T65-A77 WeakPolarHBondContact CG2-O 3.23Å; T65-A77 PolarHBondContact N-O 2.91Å; T65-A77 PolarHBondContact O-N 2.85Å; E67-A77 HydrophobicContact CB-CB 4.24Å; A77-Y95 HydrophobicContact CB-CD1 4.45Å; A77-R96 CarbonylContact C-O 3.56Å; A77-R96 WeakPolarHBondContact CA-O 3.23Å; A77-W106 HydrophobicContact CB-CH2 3.63Å; A77-W106 HydrophobicContact CB-CZ2 3.93Å
78Y90.9Very high89.5Confident56 Ų5678.2 Ų78.222%0.2241%0.409CS..EExtended strand (participates in β ladder)trans-77.5144.1162.4-62.3-70.6000109.3A62 Q63 Y95 R96 A98A62-Y78 HydrophobicContact CB-CD1 4.27Å; A62-Y78 HydrophobicContact CB-CG 4.46Å; Q63-Y78 CarbonylContact O-C 3.6Å; Q63-Y78 VanDerWaalsContact O-CA 3.31Å; Q63-Y78 WeakPolarHBondContact O-CA 3.49Å; Y78-Y95 CarbonylContact O-C 3.57Å; Y78-Y95 VanDerWaalsContact O-CA 3.28Å; Y78-Y95 WeakPolarHBondContact O-CA 3.28Å; Y78-R96 PolarHBondContact N-O 3.3Å; Y78-R96 PolarHBondContact O-N 3.35Å; Y78-A98 HydrophobicContact CD2-CB 4.17Å; Y78-A98 HydrophobicContact CE2-CB 3.87Å
79F90Very high89.5Confident44 Ų4474.4 Ų74.419%0.19340%0.398CS..EExtended strand (participates in β ladder)trans-127.7149.8173.877.5-84.1000111.8Q63 T65 Q81 T93 F94 Y95Q63-F79 HydrophobicContact CB-CD1 4.07Å; Q63-F79 HydrophobicContact CB-CE1 3.39Å; Q63-F79 HydrophobicContact CB-CZ 3.7Å; Q63-F79 VanDerWaalsContact O-CD1 3.29Å; Q63-F79 WeakPolarHBondContact O-CD1 3.3Å; Q63-F79 PolarHBondContact O-N 3.11Å; T65-F79 HydrophobicContact CG2-CB 4.33Å; T65-F79 HydrophobicContact CG2-CD1 3.92Å; T65-F79 HydrophobicContact CG2-CG 4.48Å; F79-Q81 HydrophobicContact CD2-CG 4.37Å; F79-T93 HydrophobicContact CB-CG2 4.08Å; F79-T93 HydrophobicContact CD2-CG2 4.16Å; F79-F94 CarbonylContact C-O 3.53Å; F79-F94 VanDerWaalsContact CA-O 3.24Å; F79-F94 WeakPolarHBondContact CA-O 3.41Å; F79-Y95 HydrophobicContact CB-CD1 3.52Å; F79-Y95 HydrophobicContact CB-CE1 3.5Å; F79-Y95 HydrophobicContact CG-CE1 4.4Å
80M89.2Confident89.4Confident49 Ų4979.7 Ų79.724%0.24143%0.432CS..EExtended strand (participates in β ladder)trans-139.1139.3170.567.9-178.5-55.900109.1L53 W59 L82 F94L53-M80 HydrophobicContact CB-SD 4.23Å; L53-M80 HydrophobicContact CD2-CE 4.39Å; L53-M80 HydrophobicContact CD2-SD 3.94Å; W59-M80 HydrophobicContact CH2-CG 3.68Å; W59-M80 HydrophobicContact CH2-SD 3.64Å; W59-M80 HydrophobicContact CZ2-CG 4.28Å; W59-M80 HydrophobicContact CZ2-SD 3.59Å; W59-M80 VanDerWaalsContact CZ2-SD 3.59Å; W59-M80 HydrophobicContact CZ3-CB 4.42Å; W59-M80 HydrophobicContact CZ3-CG 3.99Å; W59-M80 HydrophobicContact CZ3-SD 4.22Å; M80-L82 HydrophobicContact CE-CD1 3.6Å; M80-L82 HydrophobicContact CE-CD2 3.9Å; M80-L82 HydrophobicContact CE-CG 3.79Å; M80-L82 HydrophobicContact SD-CD1 4.28Å; M80-F94 HydrophobicContact CG-CB 3.73Å; M80-F94 PolarHBondContact N-O 3.2Å; M80-F94 PolarHBondContact O-N 3.16Å; M80-F94 HydrophobicContact SD-CB 4.49Å
81Q89.2Confident89.4Confident102 Ų10280.1 Ų80.148%0.47743%0.428SS..EExtended strand (participates in β ladder)trans-104.2128177.5-66.7-176.2-37.600109.2F79 M91 T92 T93F79-Q81 HydrophobicContact CD2-CG 4.37Å; Q81-M91 HydrophobicContact CB-CB 4.29Å; Q81-M91 HydrophobicContact CB-CE 4.37Å; Q81-M91 HydrophobicContact CB-SD 4.2Å; Q81-T92 WeakPolarHBondContact CA-O 3.39Å; Q81-T93 HydrophobicContact CG-CG2 4.11Å; Q81-T93 PolarHBondContact NE2-OG1 2.84Å
82L88.4Confident89.4Confident58 Ų5873.2 Ų73.230%0.30440%0.398SS..EExtended strand (participates in β ladder)trans-131134.5179.1-68172.1000110L53 M80 T84 T92 F94L53-L82 HydrophobicContact CD2-CD1 3.31Å; M80-L82 HydrophobicContact CE-CD1 3.6Å; M80-L82 HydrophobicContact CE-CD2 3.9Å; M80-L82 HydrophobicContact CE-CG 3.79Å; M80-L82 HydrophobicContact SD-CD1 4.28Å; L82-T84 HydrophobicContact CB-CG2 4.21Å; L82-T84 PolarHBondContact O-N 3.02Å; L82-T84 VanDerWaalsContact O-N 3.12Å; L82-T92 PolarHBondContact N-O 2.82Å; L82-T92 PolarHBondContact O-N 2.88Å; L82-F94 HydrophobicContact CB-CD2 4.19Å; L82-F94 HydrophobicContact CB-CE2 3.99Å; L82-F94 HydrophobicContact CD1-CD2 3.95Å; L82-F94 HydrophobicContact CD1-CE2 3.99Å; L82-F94 HydrophobicContact CG-CD2 4.32Å; L82-F94 HydrophobicContact CG-CE2 4.47Å
83Q88.2Confident89.4Confident88 Ų8871.7 Ų71.741%0.41139%0.388SS..  trans-76.597.7169.5-167.36424.100109R85 S86 E89 M91Q83-R85 PolarHBondContact NE2-O 2.92Å; Q83-S86 PolarHBondContact NE2-O 3.41Å; Q83-E89 PolarHBondContact NE2-O 3.28Å; Q83-M91 HydrophobicContact CB-CG 4.43Å
84T85.2Confident89.5Confident77 Ų7770.6 Ų70.647%0.47238%0.376SS..  trans-100.2-6.2176.963.80000113.4L82 T92 F94L82-T84 HydrophobicContact CB-CG2 4.21Å; L82-T84 PolarHBondContact O-N 3.02Å; L82-T84 VanDerWaalsContact O-N 3.12Å; T84-T92 PolarHBondContact OG1-OG1 3.26Å; T84-T92 VanDerWaalsContact OG1-OG1 3.05Å; T84-F94 HydrophobicContact CG2-CE2 3.93Å; T84-F94 HydrophobicContact CG2-CZ 4.1Å
85R87.8Confident89.6Confident131 Ų13168.4 Ų68.449%0.49437%0.365SS..SBendtrans-127-180-173.8-57.4-167.4-174.5166.90.8111.8Q83 E89Q83-R85 PolarHBondContact NE2-O 2.92Å; R85-E89 HydrophobicContact CB-CB 4.08Å; R85-E89 WeakPolarHBondContact CD-OE2 3.47Å; R85-E89 IonicContact CZ-OE2 2.97Å; R85-E89 IonicContact NE-OE2 3.43Å; R85-E89 IonicContact NH1-OE2 3.23Å; R85-E89 PolarHBondContact NH1-OE2 3.33Å
86S89.9Confident89.5Confident66 Ų6663.9 Ų63.946%0.46234%0.34SS..  trans-38.9143.7173.1-32.80000112.1Q83 D88 E89Q83-S86 PolarHBondContact NE2-O 3.41Å; S86-D88 PolarHBondContact O-N 2.8Å; S86-D88 VanDerWaalsContact O-N 3.11Å; S86-E89 PolarHBondContact O-N 3.44Å; S86-E89 PolarHBondContact OG-OE1 3.42Å
87A87.8Confident89.5Confident97 Ų9762.7 Ų62.780%0.80233%0.332SS*.THydrogen-bonded Turntrans-60.3-24.4-178.600000113.7E89A87-E89 VanDerWaalsContact C-N 3.34Å
88D92.4Very high89.4Confident168 Ų16863.4 Ų63.490%0.89834%0.338SS*.THydrogen-bonded Turntrans-80.8-12.5177.4-58.3-37.9000113.3S86S86-D88 PolarHBondContact O-N 2.8Å; S86-D88 VanDerWaalsContact O-N 3.11Å
89E89.5Confident89.1Confident71 Ų7163.2 Ų63.233%0.33234%0.341SS..SBendtrans-94.3145.1178.1-71.4-179.9-125.200111.4Q83 R85 S86 A87Q83-E89 PolarHBondContact NE2-O 3.28Å; R85-E89 HydrophobicContact CB-CB 4.08Å; R85-E89 WeakPolarHBondContact CD-OE2 3.47Å; R85-E89 IonicContact CZ-OE2 2.97Å; R85-E89 IonicContact NE-OE2 3.43Å; R85-E89 IonicContact NH1-OE2 3.23Å; R85-E89 PolarHBondContact NH1-OE2 3.33Å; S86-E89 PolarHBondContact O-N 3.44Å; S86-E89 PolarHBondContact OG-OE1 3.42Å; A87-E89 VanDerWaalsContact C-N 3.34Å
90P89Confident88.7Confident111 Ų11167 Ų6772%0.72136%0.363SS*.PPolyproline II helixtrans-63.4153.9179.727.5-35000112.3
91M90.8Very high88.5Confident99 Ų9970.7 Ų70.749%0.48839%0.389SS..PPolyproline II helixtrans-60140.6176.2-70.4-177.4-67.500111.3Q81 Q83Q81-M91 HydrophobicContact CB-CB 4.29Å; Q81-M91 HydrophobicContact CB-CE 4.37Å; Q81-M91 HydrophobicContact CB-SD 4.2Å; Q83-M91 HydrophobicContact CB-CG 4.43Å
92T89.4Confident88.3Confident8 Ų867.1 Ų67.15%0.04938%0.375CS..EExtended strand (participates in β ladder)trans-81133.5172.3-54.40000109.3Q81 L82 T84 F94 R107Q81-T92 WeakPolarHBondContact CA-O 3.39Å; L82-T92 PolarHBondContact N-O 2.82Å; L82-T92 PolarHBondContact O-N 2.88Å; T84-T92 PolarHBondContact OG1-OG1 3.26Å; T84-T92 VanDerWaalsContact OG1-OG1 3.05Å; T92-F94 HydrophobicContact CG2-CD2 4.39Å; T92-F94 HydrophobicContact CG2-CE2 3.87Å; T92-F94 HydrophobicContact CG2-CZ 4.03Å; T92-R107 HydrophobicContact CG2-CB 4.5Å
93T90.5Very high88Confident19 Ų1966.1 Ų66.112%0.11738%0.375CS..EExtended strand (participates in β ladder)trans-97.5122.1176.9-52.60000109.3F79 Q81 Y95 R107 D108F79-T93 HydrophobicContact CB-CG2 4.08Å; F79-T93 HydrophobicContact CD2-CG2 4.16Å; Q81-T93 HydrophobicContact CG-CG2 4.11Å; Q81-T93 PolarHBondContact NE2-OG1 2.84Å; T93-Y95 HydrophobicContact CG2-CD1 4.5Å; T93-Y95 HydrophobicContact CG2-CD2 4.48Å; T93-Y95 HydrophobicContact CG2-CE1 3.83Å; T93-Y95 HydrophobicContact CG2-CE2 3.84Å; T93-Y95 VanDerWaalsContact CG2-CZ 3.48Å; T93-R107 WeakPolarHBondContact O-CA 3.32Å; T93-D108 PolarHBondContact O-N 2.84Å; T93-D108 VanDerWaalsContact O-N 3.09Å
94F91Very high87.9Confident32 Ų3265 Ų6514%0.1437%0.37CS..EExtended strand (participates in β ladder)trans-101.2133.3174-68.2-88.5000109.3L53 W59 F79 M80 L82 T84 T92 R107L53-F94 HydrophobicContact CD1-CB 4.41Å; L53-F94 HydrophobicContact CD1-CD1 3.7Å; L53-F94 HydrophobicContact CD1-CE1 4.17Å; L53-F94 HydrophobicContact CD1-CG 4.12Å; L53-F94 HydrophobicContact CD2-CD1 4.31Å; L53-F94 HydrophobicContact CD2-CD2 4.24Å; L53-F94 HydrophobicContact CD2-CE1 4.48Å; L53-F94 HydrophobicContact CD2-CE2 4.43Å; L53-F94 HydrophobicContact CD2-CG 4.17Å; W59-F94 HydrophobicContact CH2-CB 4.16Å; F79-F94 CarbonylContact C-O 3.53Å; F79-F94 VanDerWaalsContact CA-O 3.24Å; F79-F94 WeakPolarHBondContact CA-O 3.41Å; M80-F94 HydrophobicContact CG-CB 3.73Å; M80-F94 PolarHBondContact N-O 3.2Å; M80-F94 PolarHBondContact O-N 3.16Å; M80-F94 HydrophobicContact SD-CB 4.49Å; L82-F94 HydrophobicContact CB-CD2 4.19Å; L82-F94 HydrophobicContact CB-CE2 3.99Å; L82-F94 HydrophobicContact CD1-CD2 3.95Å; L82-F94 HydrophobicContact CD1-CE2 3.99Å; L82-F94 HydrophobicContact CG-CD2 4.32Å; L82-F94 HydrophobicContact CG-CE2 4.47Å; T84-F94 HydrophobicContact CG2-CE2 3.93Å; T84-F94 HydrophobicContact CG2-CZ 4.1Å; T92-F94 HydrophobicContact CG2-CD2 4.39Å; T92-F94 HydrophobicContact CG2-CE2 3.87Å; T92-F94 HydrophobicContact CG2-CZ 4.03Å; F94-R107 HydrophobicContact CD1-CB 4.08Å; F94-R107 HydrophobicContact CE1-CB 4.18Å
95Y91Very high88.1Confident29 Ų2965.4 Ų65.411%0.11436%0.362CS..EExtended strand (participates in β ladder)trans-112.7148.1177.8-63.4-75.3000110.9T65 E67 A77 Y78 F79 T93 R105 W106 D108T65-Y95 HydrophobicContact CG2-CD1 4.13Å; T65-Y95 HydrophobicContact CG2-CE1 3.83Å; E67-Y95 HydrophobicContact CB-CE1 4.48Å; E67-Y95 HydrophobicContact CG-CE1 3.96Å; A77-Y95 HydrophobicContact CB-CD1 4.45Å; Y78-Y95 CarbonylContact O-C 3.57Å; Y78-Y95 VanDerWaalsContact O-CA 3.28Å; Y78-Y95 WeakPolarHBondContact O-CA 3.28Å; F79-Y95 HydrophobicContact CB-CD1 3.52Å; F79-Y95 HydrophobicContact CB-CE1 3.5Å; F79-Y95 HydrophobicContact CG-CE1 4.4Å; T93-Y95 HydrophobicContact CG2-CD1 4.5Å; T93-Y95 HydrophobicContact CG2-CD2 4.48Å; T93-Y95 HydrophobicContact CG2-CE1 3.83Å; T93-Y95 HydrophobicContact CG2-CE2 3.84Å; T93-Y95 VanDerWaalsContact CG2-CZ 3.48Å; Y95-R105 CarbonylContact O-C 3.57Å; Y95-R105 VanDerWaalsContact O-CA 3.23Å; Y95-R105 WeakPolarHBondContact O-CA 3.38Å; Y95-W106 AromaticContact CD2-CD1 3.87Å; Y95-W106 AromaticContact CD2-NE1 3.46Å; Y95-W106 AromaticContact CG-CE2 3.88Å; Y95-W106 HydrophobicContact CG-CZ2 4.08Å; Y95-W106 AromaticContact CG-NE1 3.73Å; Y95-W106 PolarHBondContact N-O 3.15Å; Y95-W106 PolarHBondContact O-N 3.33Å; Y95-D108 HydrophobicContact CE2-CB 3.86Å
96R89.2Confident88.1Confident10 Ų1061.6 Ų61.64%0.03835%0.348CS..EExtended strand (participates in β ladder)trans-133.9130.5169-177.9-177177.3-156.4-9.2109V56 W59 A77 Y78 A98 H104 R105V56-R96 PolarHBondContact O-NH1 3.41Å; V56-R96 VanDerWaalsContact O-NH1 3.14Å; W59-R96 VanDerWaalsContact CD1-NH1 3.3Å; W59-R96 HydrophobicContact CD2-CB 3.72Å; W59-R96 VanDerWaalsContact CD2-CD 3.44Å; W59-R96 HydrophobicContact CD2-CG 4.23Å; W59-R96 HydrophobicContact CE3-CB 3.46Å; W59-R96 VanDerWaalsContact CE3-CB 3.46Å; W59-R96 HydrophobicContact CE3-CG 4.39Å; W59-R96 VanDerWaalsContact CG-NH1 3.32Å; W59-R96 HydrophobicContact CH2-CB 3.72Å; W59-R96 HydrophobicContact CZ2-CB 3.99Å; W59-R96 HydrophobicContact CZ3-CB 3.46Å; W59-R96 VanDerWaalsContact CZ3-CB 3.46Å; A77-R96 CarbonylContact C-O 3.56Å; A77-R96 WeakPolarHBondContact CA-O 3.23Å; Y78-R96 PolarHBondContact N-O 3.3Å; Y78-R96 PolarHBondContact O-N 3.35Å; R96-A98 PolarHBondContact O-N 2.59Å; R96-H104 WeakPolarHBondContact CA-O 3.38Å; R96-R105 HydrophobicContact CB-CG 4.27Å; R96-R105 HydrophobicContact CG-CG 4.1Å
97C90Very high88Confident1 Ų164.8 Ų64.81%0.00735%0.35CS..EExtended strand (participates in β ladder)trans-55.2130.6175.5-174.20000110.7C69 C72 N99 C102 H104 W106C69-C97 HydrophobicContact CB-CB 4.05Å; C72-C97 PolarHBondContact SG-SG 3.22Å; C97-N99 PolarHBondContact O-N 2.81Å; C97-N99 PolarHBondContact SG-N 2.84Å; C97-C102 HydrophobicContact CB-CB 4.42Å; C97-H104 PolarHBondContact N-O 2.95Å; C97-W106 HydrophobicContact CB-CZ3 4.06Å
98A88Confident87.6Confident15 Ų1568 Ų6812%0.12435%0.354CS..SBendtrans-70.3-17.3178.700000112.8T76 Y78 R96 N100T76-A98 WeakPolarHBondContact O-CB 3.37Å; T76-A98 PolarHBondContact O-N 2.97Å; T76-A98 WeakPolarHBondContact OG1-CB 3.35Å; Y78-A98 HydrophobicContact CD2-CB 4.17Å; Y78-A98 HydrophobicContact CE2-CB 3.87Å; R96-A98 PolarHBondContact O-N 2.59Å; A98-N100 PolarHBondContact O-N 2.85Å
99N85.2Confident87.4Confident53 Ų5363 Ų6328%0.28333%0.326SS..  trans-73.6110.2172-174.3-6.2000110.6H74 C97 T101 C102 A103H74-N99 HydrophobicContact CB-CB 4.42Å; C97-N99 PolarHBondContact O-N 2.81Å; C97-N99 PolarHBondContact SG-N 2.84Å; N99-T101 PolarHBondContact ND2-OG1 3.23Å; N99-T101 PolarHBondContact O-N 2.78Å; N99-T101 VanDerWaalsContact O-N 3.15Å; N99-T101 PolarHBondContact OD1-N 2.76Å; N99-T101 VanDerWaalsContact OD1-N 3.07Å; N99-T101 PolarHBondContact OD1-OG1 2.75Å; N99-C102 HydrophobicContact CB-CB 4.39Å; N99-C102 PolarHBondContact O-N 3.48Å; N99-A103 PolarHBondContact O-N 3.15Å
100N81.1Confident87.3Confident122 Ų12262.6 Ų62.665%0.65233%0.326SS*.THydrogen-bonded Turntrans-57.4-26.2179.8-74.2-21.2000114.1A98A98-N100 PolarHBondContact O-N 2.85Å
101T85Confident87.2Confident128 Ų12859.9 Ų59.979%0.78530%0.304SS*.THydrogen-bonded Turntrans-77.1-26.9177.564.40000112.8N99N99-T101 PolarHBondContact ND2-OG1 3.23Å; N99-T101 PolarHBondContact O-N 2.78Å; N99-T101 VanDerWaalsContact O-N 3.15Å; N99-T101 PolarHBondContact OD1-N 2.76Å; N99-T101 VanDerWaalsContact OD1-N 3.07Å; N99-T101 PolarHBondContact OD1-OG1 2.75Å
102C84.9Confident87Confident27 Ų2757.6 Ų57.618%0.18229%0.293CS..THydrogen-bonded Turntrans-88.9-51.9178.1-173.90000111.2C72 C97 N99 H104C72-C102 HydrophobicContact CB-CB 4.07Å; C97-C102 HydrophobicContact CB-CB 4.42Å; N99-C102 HydrophobicContact CB-CB 4.39Å; N99-C102 PolarHBondContact O-N 3.48Å; C102-H104 PolarHBondContact O-N 2.82Å
103A81.7Confident86.8Confident36 Ų3660.7 Ų60.730%0.29831%0.309SS..  trans46.523.3-178.200000115.3N99 R105N99-A103 PolarHBondContact O-N 3.15Å; A103-R105 PolarHBondContact O-N 3.41Å
104H87.1Confident86.6Confident66 Ų6663.5 Ų63.531%0.30632%0.321SS..  trans-65.2133.4-179.1-175.660.1000110.2K71 R96 C97 C102 W106K71-H104 HydrophobicContact CB-CB 4.3Å; K71-H104 HydrophobicContact CD-CB 4.23Å; R96-H104 WeakPolarHBondContact CA-O 3.38Å; C97-H104 PolarHBondContact N-O 2.95Å; C102-H104 PolarHBondContact O-N 2.82Å; H104-W106 AromaticContact CD2-CE3 3.8Å; H104-W106 WeakPolarHBondContact O-CZ3 3.1Å
105R88.2Confident86.2Confident84 Ų8465.7 Ų65.732%0.31733%0.334SS..EExtended strand (participates in β ladder)trans-107.8134.7177-61.7178.2-176.7169.2-1.5109.2D51 G54 Y95 R96 A103D51-R105 IonicContact OD1-NH1 3.49Å; D51-R105 PolarHBondContact OD1-NH1 3.18Å; D51-R105 IonicContact OD2-CZ 3.95Å; D51-R105 IonicContact OD2-NH1 3.85Å; D51-R105 PolarHBondContact OD2-NH1 3.03Å; D51-R105 IonicContact OD2-NH2 3.19Å; D51-R105 PolarHBondContact OD2-NH2 2.86Å; G54-R105 PolarHBondContact O-NH2 2.87Å; Y95-R105 CarbonylContact O-C 3.57Å; Y95-R105 VanDerWaalsContact O-CA 3.23Å; Y95-R105 WeakPolarHBondContact O-CA 3.38Å; R96-R105 HydrophobicContact CB-CG 4.27Å; R96-R105 HydrophobicContact CG-CG 4.1Å; A103-R105 PolarHBondContact O-N 3.41Å
106W89.4Confident85.9Confident52 Ų5268.5 Ų68.520%0.19735%0.351CS..EExtended strand (participates in β ladder)trans-141172.317368.998.9000110C69 P70 A77 Y95 C97 H104C69-W106 HydrophobicContact CB-CH2 3.97Å; C69-W106 HydrophobicContact CB-CZ3 4.17Å; P70-W106 HydrophobicContact CG-CD2 4.27Å; P70-W106 HydrophobicContact CG-CE3 4.42Å; P70-W106 HydrophobicContact CG-CG 4.48Å; A77-W106 HydrophobicContact CB-CH2 3.63Å; A77-W106 HydrophobicContact CB-CZ2 3.93Å; Y95-W106 AromaticContact CD2-CD1 3.87Å; Y95-W106 AromaticContact CD2-NE1 3.46Å; Y95-W106 AromaticContact CG-CE2 3.88Å; Y95-W106 HydrophobicContact CG-CZ2 4.08Å; Y95-W106 AromaticContact CG-NE1 3.73Å; Y95-W106 PolarHBondContact N-O 3.15Å; Y95-W106 PolarHBondContact O-N 3.33Å; C97-W106 HydrophobicContact CB-CZ3 4.06Å; H104-W106 AromaticContact CD2-CE3 3.8Å; H104-W106 WeakPolarHBondContact O-CZ3 3.1Å
107R86.3Confident85.6Confident133 Ų13373.4 Ų73.450%0.50238%0.378SS..EExtended strand (participates in β ladder)trans-130.7151.2-17961.1-176.4-67.9-1735.7109.1T92 T93 F94T92-R107 HydrophobicContact CG2-CB 4.5Å; T93-R107 WeakPolarHBondContact O-CA 3.32Å; F94-R107 HydrophobicContact CD1-CB 4.08Å; F94-R107 HydrophobicContact CE1-CB 4.18Å
108D80.3Confident85.2Confident164 Ų16480 Ų8088%0.87741%0.411SS*.  trans-116.10163.5-160.361.8000108.8T93 Y95T93-D108 PolarHBondContact O-N 2.84Å; T93-D108 VanDerWaalsContact O-N 3.09Å; Y95-D108 HydrophobicContact CE2-CB 3.86Å

Retrieved 108 of 108 residues in 27.4 ms (Link to these results)