A0A077Z8Z0_TRITR Loading...

Cytochrome b-c1 complex subunit 8

Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The complex plays an important role in the uptake of multiple carbon sources present in different host niches.

AlphaFold DB , UniProt , Accession A0A077Z8Z0, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 79 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M78.7Confident89.5Confident242 Ų242153.2 Ų153.2100%1.19275%0.75SS**  0142.40-67.7171.7174.400108.3
2R84.9Confident90Very high193 Ų193145.9 Ų145.973%0.72874%0.744SS**PPolyproline II helixtrans-72.6137.1176.9-65.3-179.3-173.41632109.1
3P90.4Very high90.2Very high81 Ų81143.2 Ų143.253%0.52674%0.738SS.*PPolyproline II helixtrans-66.9156179.828.5-34.4000111.2G5 K6P3-G5 PolarHBondContact O-N 3.09Å; P3-K6 HydrophobicContact CG-CB 4.23Å; P3-K6 HydrophobicContact CG-CD 4.11Å; P3-K6 HydrophobicContact CG-CG 4.32Å; P3-K6 PolarHBondContact O-N 3.47Å
4W90.5Very high90.5Very high236 Ų236147.2 Ų147.289%0.89474%0.741SS**THydrogen-bonded Turntrans-52.8140170-70.6-31.2000110.6K6 M7W4-K6 VanDerWaalsContact C-N 3.34Å; W4-K6 PolarHBondContact O-N 3.47Å; W4-M7 HydrophobicContact CB-CE 4.47Å; W4-M7 HydrophobicContact CG-CE 4.35Å
5G88.9Confident90.8Very high77 Ų77144.8 Ų144.879%0.79474%0.744SS**THydrogen-bonded Turntrans86.7-15.8-172.600000115.6P3P3-G5 PolarHBondContact O-N 3.09Å
6K92Very high91.2Very high165 Ų165148.3 Ų148.372%0.71775%0.752SS**SBendtrans-115.424.3174-60.9-172.1-178.4-179.80113.3P3 W4P3-K6 HydrophobicContact CG-CB 4.23Å; P3-K6 HydrophobicContact CG-CD 4.11Å; P3-K6 HydrophobicContact CG-CG 4.32Å; P3-K6 PolarHBondContact O-N 3.47Å; W4-K6 VanDerWaalsContact C-N 3.34Å; W4-K6 PolarHBondContact O-N 3.47Å
7M92.5Very high91.3Very high108 Ų108144.3 Ų144.353%0.53276%0.757SS.*SBendtrans-80.6-57.1-174.9-65.1-176.5-76.500112W4W4-M7 HydrophobicContact CB-CE 4.47Å; W4-M7 HydrophobicContact CG-CE 4.35Å
8A90.1Very high91.5Very high74 Ų74142.6 Ų142.661%0.61275%0.748SS**  trans-154.9158.8-177.100000110.5L10A8-L10 HydrophobicContact CB-CG 4.29Å
9K92.1Very high91.6Very high181 Ų181137.7 Ų137.779%0.78773%0.727SS**  trans-93.3110.3167-67.3-178.1-180179.90107.8Y11K9-Y11 HydrophobicContact CB-CE2 3.99Å
10L91.4Very high91.7Very high135 Ų135136.1 Ų136.171%0.70772%0.724SS**  trans-118.2132.9177.9-63170.5000108A8A8-L10 HydrophobicContact CB-CG 4.29Å
11Y93.2Very high91.8Very high193 Ų193139 Ų13976%0.75773%0.731SS**  trans-130.1139.7177.5-60.6-81.7000108.8K9 V13K9-Y11 HydrophobicContact CB-CE2 3.99Å; Y11-V13 PolarHBondContact O-N 3.45Å
12G94.6Very high92.6Very high66 Ų66134.3 Ų134.368%0.6871%0.706SS**SBendtrans74.617.7173.400000116.3
13V93.2Very high92.9Very high111 Ų111130.1 Ų130.167%0.67370%0.695SS**  trans-99.6119.8175.9-176.80000109.8Y11Y11-V13 PolarHBondContact O-N 3.45Å
14Y94.8Very high93Very high199 Ų199134.7 Ų134.778%0.7871%0.707SS**  trans-111136172.3-59.1-86.2000109.2
15S95.1Very high92.9Very high111 Ų111128 Ų12878%0.77670%0.701SS**  trans-127146.9175.1590000110.2
16F96Very high92.9Very high201 Ų201132.5 Ų132.588%0.88270%0.7SS**  trans-118.3141.5178-57-81000109
17G93.9Very high92.5Very high80 Ų80127 Ų12783%0.82569%0.69SS**  trans-144.4142.317600000110
18L94.2Very high92.3Very high114 Ų114127.4 Ų127.460%0.59769%0.69SS**  trans-89.2153.7173.3-74.4165.9000110.1Q23L18-Q23 HydrophobicContact CB-CG 3.67Å; L18-Q23 HydrophobicContact CD1-CG 4.21Å; L18-Q23 PolarHBondContact O-NE2 2.79Å
19S94.8Very high92.1Very high50 Ų50130.2 Ų130.235%0.3569%0.689SS.*  trans-61.9141.1171.31770000110.2F21 E22 Q23S19-F21 PolarHBondContact O-N 3.47Å; S19-F21 VanDerWaalsContact O-N 3.09Å; S19-E22 PolarHBondContact N-OE2 2.94Å; S19-E22 PolarHBondContact O-N 2.84Å; S19-Q23 PolarHBondContact O-N 3.39Å
20P93.1Very high92Very high104 Ų104124.3 Ų124.368%0.67568%0.679SS**G310 helixtrans-54.8-29.3176.3-26.734.9000113.6E22 Q23P20-E22 VanDerWaalsContact C-N 3.29Å; P20-E22 PolarHBondContact O-N 3.25Å; P20-Q23 PolarHBondContact O-N 3.41Å
21F94.4Very high92Very high198 Ų198119.9 Ų119.987%0.86866%0.659SS**G310 helixtrans-76.1-14.5179-58.8-74.2000113.8S19S19-F21 PolarHBondContact O-N 3.47Å; S19-F21 VanDerWaalsContact O-N 3.09Å
22E93.6Very high92Very high144 Ų144113.7 Ų113.767%0.67364%0.64SS**G310 helixtrans-97.2-10.9177.4-64174.815400112.2S19 P20S19-E22 PolarHBondContact N-OE2 2.94Å; S19-E22 PolarHBondContact O-N 2.84Å; P20-E22 VanDerWaalsContact C-N 3.29Å; P20-E22 PolarHBondContact O-N 3.25Å
23Q93.2Very high92Very high105 Ų105115 Ų11549%0.49163%0.629SS.*SBendtrans-97.3151.4-178.2-62.2-17942.900111.4L18 S19 P20L18-Q23 HydrophobicContact CB-CG 3.67Å; L18-Q23 HydrophobicContact CD1-CG 4.21Å; L18-Q23 PolarHBondContact O-NE2 2.79Å; S19-Q23 PolarHBondContact O-N 3.39Å; P20-Q23 PolarHBondContact O-N 3.41Å
24K91Very high92.1Very high177 Ų177117.4 Ų117.477%0.7763%0.627SS**  trans-81.7130.1168-68.3-178.9-178.9178.10109.3F26 G27K24-F26 VanDerWaalsContact C-N 3.25Å; K24-F26 PolarHBondContact O-N 2.91Å; K24-G27 PolarHBondContact O-N 2.99Å
25A89.5Confident92.1Very high95 Ų95113.1 Ų113.179%0.78561%0.613SS**THydrogen-bonded Turntrans-56.8-37.6177.700000113.3
26F87.5Confident92.1Very high172 Ų172112.1 Ų112.175%0.75460%0.598SS**THydrogen-bonded Turntrans-127.458.5175.8-60.6-75.1000110.3K24 E28K24-F26 VanDerWaalsContact C-N 3.25Å; K24-F26 PolarHBondContact O-N 2.91Å; F26-E28 VanDerWaalsContact C-N 3.34Å; F26-E28 PolarHBondContact O-N 3.48Å
27G85Confident92.1Very high50 Ų50104.1 Ų104.152%0.51557%0.572SS.*THydrogen-bonded Turntrans-66.5-31.8-175.600000114.6K24K24-G27 PolarHBondContact O-N 2.99Å
28E87.5Confident92.2Very high116 Ų116106.8 Ų106.854%0.54256%0.558SS.*THydrogen-bonded Turntrans-122.834.5-170.3-58.3-168.2178.400113.8F26 G30 S31 D32 K35F26-E28 VanDerWaalsContact C-N 3.34Å; F26-E28 PolarHBondContact O-N 3.48Å; E28-G30 PolarHBondContact O-N 3.46Å; E28-S31 WeakPolarHBondContact CB-OG 3.39Å; E28-S31 WeakPolarHBondContact O-CA 3.39Å; E28-S31 PolarHBondContact O-N 3.3Å; E28-S31 PolarHBondContact O-OG 2.83Å; E28-S31 PolarHBondContact OE2-OG 2.89Å; E28-D32 PolarHBondContact O-N 3.39Å; E28-K35 IonicContact OE2-NZ 3.46Å
29F86.8Confident92.3Very high133 Ų133106.3 Ų106.358%0.58355%0.553SS**Hα-helixtrans-48.1-40.4-174.5-174.7-98000114.2D32 M33F29-D32 PolarHBondContact O-N 2.85Å; F29-M33 HydrophobicContact CD1-CG 4.06Å; F29-M33 HydrophobicContact CE1-CG 3.69Å; F29-M33 HydrophobicContact CE1-SD 4.13Å; F29-M33 HydrophobicContact CE2-CG 4.35Å; F29-M33 HydrophobicContact CZ-CG 3.85Å; F29-M33 HydrophobicContact CZ-SD 3.85Å; F29-M33 WeakPolarHBondContact O-CB 3.16Å; F29-M33 WeakPolarHBondContact O-CG 3.45Å; F29-M33 PolarHBondContact O-N 3.29Å
30G89.4Confident92.3Very high56 Ų56109.9 Ų109.958%0.57756%0.563SS**Hα-helixtrans-67.4-39.8175.900000114.1E28 D32 Y34E28-G30 PolarHBondContact O-N 3.46Å; G30-D32 VanDerWaalsContact C-N 3.34Å; G30-Y34 PolarHBondContact O-N 3.48Å
31S92.2Very high92.4Very high42 Ų42110.7 Ų110.729%0.29456%0.561SS.*Hα-helixtrans-67.9-39.2176.2107.70000110.3E28 Y34 K35E28-S31 WeakPolarHBondContact CB-OG 3.39Å; E28-S31 WeakPolarHBondContact O-CA 3.39Å; E28-S31 PolarHBondContact O-N 3.3Å; E28-S31 PolarHBondContact O-OG 2.83Å; E28-S31 PolarHBondContact OE2-OG 2.89Å; S31-Y34 PolarHBondContact O-N 3.49Å; S31-K35 VanDerWaalsContact O-CG 3.3Å; S31-K35 WeakPolarHBondContact O-CG 3.3Å; S31-K35 PolarHBondContact O-N 3.06Å; S31-K35 PolarHBondContact OG-NZ 2.89Å
32D92.4Very high92.4Very high64 Ų64105.9 Ų105.934%0.34254%0.541SS..Hα-helixtrans-68.5-41.6178.9-65.7-25.9000111.6E28 F29 G30 Y34 K35 L36E28-D32 PolarHBondContact O-N 3.39Å; F29-D32 PolarHBondContact O-N 2.85Å; G30-D32 VanDerWaalsContact C-N 3.34Å; D32-Y34 VanDerWaalsContact C-N 3.32Å; D32-Y34 PolarHBondContact O-N 3.07Å; D32-K35 PolarHBondContact O-N 3.3Å; D32-K35 IonicContact OD1-NZ 3.51Å; D32-K35 PolarHBondContact OD1-NZ 3.34Å; D32-L36 WeakPolarHBondContact O-CB 3.31Å; D32-L36 VanDerWaalsContact O-CG 3.31Å; D32-L36 WeakPolarHBondContact O-CG 3.41Å; D32-L36 PolarHBondContact O-N 2.89Å
33M93.7Very high92.5Very high93 Ų93103 Ų10346%0.45853%0.531SS..Hα-helixtrans-61.5-40.8172.5-72.9-87.180.500111.9F29 L36 G37F29-M33 HydrophobicContact CD1-CG 4.06Å; F29-M33 HydrophobicContact CE1-CG 3.69Å; F29-M33 HydrophobicContact CE1-SD 4.13Å; F29-M33 HydrophobicContact CE2-CG 4.35Å; F29-M33 HydrophobicContact CZ-CG 3.85Å; F29-M33 HydrophobicContact CZ-SD 3.85Å; F29-M33 WeakPolarHBondContact O-CB 3.16Å; F29-M33 WeakPolarHBondContact O-CG 3.45Å; F29-M33 PolarHBondContact O-N 3.29Å; M33-L36 HydrophobicContact CE-CB 4.48Å; M33-L36 HydrophobicContact CE-CD1 3.48Å; M33-L36 VanDerWaalsContact CE-CD1 3.48Å; M33-L36 PolarHBondContact O-N 3.48Å; M33-G37 PolarHBondContact O-N 2.88Å
34Y95.4Very high92.6Very high161 Ų161104.7 Ų104.763%0.63153%0.532SS*.Hα-helixtrans-63.8-45.1174.7178.3-98000112G30 S31 D32 L36 G37 R38G30-Y34 PolarHBondContact O-N 3.48Å; S31-Y34 PolarHBondContact O-N 3.49Å; D32-Y34 VanDerWaalsContact C-N 3.32Å; D32-Y34 PolarHBondContact O-N 3.07Å; Y34-L36 PolarHBondContact O-N 3.43Å; Y34-G37 PolarHBondContact O-N 2.85Å; Y34-R38 WeakPolarHBondContact O-CB 3.45Å; Y34-R38 PolarHBondContact O-N 3.34Å
35K95.9Very high92.7Very high110 Ų110103.6 Ų103.648%0.47852%0.524SS..Hα-helixtrans-60.2-44.3175.5-71166.9-165.5153.90111.4E28 S31 D32 R38 M39E28-K35 IonicContact OE2-NZ 3.46Å; S31-K35 VanDerWaalsContact O-CG 3.3Å; S31-K35 WeakPolarHBondContact O-CG 3.3Å; S31-K35 PolarHBondContact O-N 3.06Å; S31-K35 PolarHBondContact OG-NZ 2.89Å; D32-K35 PolarHBondContact O-N 3.3Å; D32-K35 IonicContact OD1-NZ 3.51Å; D32-K35 PolarHBondContact OD1-NZ 3.34Å; K35-R38 PolarHBondContact O-N 3.06Å; K35-M39 VanDerWaalsContact O-CB 3.31Å; K35-M39 WeakPolarHBondContact O-CB 3.31Å; K35-M39 PolarHBondContact O-N 3.47Å
36L95.1Very high92.9Very high89 Ų89102 Ų10247%0.46651%0.51SS..Hα-helixtrans-63-45176.8-75.2170.4000111.8D32 M33 Y34 M39 F40D32-L36 WeakPolarHBondContact O-CB 3.31Å; D32-L36 VanDerWaalsContact O-CG 3.31Å; D32-L36 WeakPolarHBondContact O-CG 3.41Å; D32-L36 PolarHBondContact O-N 2.89Å; M33-L36 HydrophobicContact CE-CB 4.48Å; M33-L36 HydrophobicContact CE-CD1 3.48Å; M33-L36 VanDerWaalsContact CE-CD1 3.48Å; M33-L36 PolarHBondContact O-N 3.48Å; Y34-L36 PolarHBondContact O-N 3.43Å; L36-M39 HydrophobicContact CD2-CE 3.91Å; L36-M39 PolarHBondContact O-N 2.84Å; L36-F40 WeakPolarHBondContact O-CB 3.34Å; L36-F40 PolarHBondContact O-N 3.39Å
37G95.9Very high93.1Very high33 Ų3398.4 Ų98.434%0.3450%0.498SS..Hα-helixtrans-62.1-43.4175.900000112.3M33 Y34 F40 L41M33-G37 PolarHBondContact O-N 2.88Å; Y34-G37 PolarHBondContact O-N 2.85Å; G37-F40 PolarHBondContact O-N 3.36Å; G37-L41 WeakPolarHBondContact O-CG 3.39Å; G37-L41 PolarHBondContact O-N 3.43Å
38R96.6Very high93.5Very high137 Ų13799.5 Ų99.552%0.51749%0.492SS..Hα-helixtrans-62.3-46.6174.5-178.2179169.6154.51.2111.7Y34 K35 F40 L41 E42Y34-R38 WeakPolarHBondContact O-CB 3.45Å; Y34-R38 PolarHBondContact O-N 3.34Å; K35-R38 PolarHBondContact O-N 3.06Å; R38-F40 VanDerWaalsContact C-N 3.3Å; R38-F40 PolarHBondContact O-N 2.97Å; R38-L41 CarbonylContact O-C 3.53Å; R38-L41 PolarHBondContact O-N 2.83Å; R38-L41 VanDerWaalsContact O-N 3.15Å; R38-E42 HydrophobicContact CG-CG 4.42Å; R38-E42 IonicContact CZ-OE1 3.23Å; R38-E42 IonicContact NE-OE1 3.85Å; R38-E42 PolarHBondContact NE-OE1 2.77Å; R38-E42 IonicContact NH2-OE1 2.77Å; R38-E42 PolarHBondContact NH2-OE1 2.98Å; R38-E42 WeakPolarHBondContact O-CG 3.43Å; R38-E42 PolarHBondContact O-N 3.34Å
39M95.7Very high93.8Very high104 Ų10496.9 Ų96.951%0.51249%0.485SS..Hα-helixtrans-61-39.2177.1-175.4-177.672.500111.6K35 L36 E42 N43K35-M39 VanDerWaalsContact O-CB 3.31Å; K35-M39 WeakPolarHBondContact O-CB 3.31Å; K35-M39 PolarHBondContact O-N 3.47Å; L36-M39 HydrophobicContact CD2-CE 3.91Å; L36-M39 PolarHBondContact O-N 2.84Å; M39-E42 PolarHBondContact O-N 3.4Å; M39-N43 WeakPolarHBondContact O-CB 3.39Å; M39-N43 PolarHBondContact O-N 2.82Å; M39-N43 VanDerWaalsContact O-N 3.11Å; M39-N43 PolarHBondContact O-ND2 3.11Å
40F95.1Very high94.2Very high125 Ų12595.1 Ų95.155%0.54848%0.484SS..Hα-helixtrans-62.2-46173.2177.7-98000111.6L36 G37 R38 E42 N43 W44 L47L36-F40 WeakPolarHBondContact O-CB 3.34Å; L36-F40 PolarHBondContact O-N 3.39Å; G37-F40 PolarHBondContact O-N 3.36Å; R38-F40 VanDerWaalsContact C-N 3.3Å; R38-F40 PolarHBondContact O-N 2.97Å; F40-E42 VanDerWaalsContact C-N 3.31Å; F40-E42 PolarHBondContact O-N 3.15Å; F40-N43 CarbonylContact O-C 3.55Å; F40-N43 PolarHBondContact O-N 3.28Å; F40-W44 WeakPolarHBondContact O-CA 3.47Å; F40-W44 WeakPolarHBondContact O-CB 3.47Å; F40-W44 PolarHBondContact O-N 3.08Å; F40-L47 HydrophobicContact CE2-CD1 4.24Å
41L94.5Very high94.4Very high120 Ų12095.9 Ų95.963%0.62848%0.479SS*.Hα-helixtrans-70.2-21.4176.6-68.4175.7000114.1G37 R38G37-L41 WeakPolarHBondContact O-CG 3.39Å; G37-L41 PolarHBondContact O-N 3.43Å; R38-L41 CarbonylContact O-C 3.53Å; R38-L41 PolarHBondContact O-N 2.83Å; R38-L41 VanDerWaalsContact O-N 3.15Å
42E95.5Very high94.6Very high98 Ų9898.7 Ų98.746%0.45849%0.49SS..Hα-helixtrans-79.6-28.1172.6-75.4173.6179.100111.4R38 M39 F40 W45R38-E42 HydrophobicContact CG-CG 4.42Å; R38-E42 IonicContact CZ-OE1 3.23Å; R38-E42 IonicContact NE-OE1 3.85Å; R38-E42 PolarHBondContact NE-OE1 2.77Å; R38-E42 IonicContact NH2-OE1 2.77Å; R38-E42 PolarHBondContact NH2-OE1 2.98Å; R38-E42 WeakPolarHBondContact O-CG 3.43Å; R38-E42 PolarHBondContact O-N 3.34Å; M39-E42 PolarHBondContact O-N 3.4Å; F40-E42 VanDerWaalsContact C-N 3.31Å; F40-E42 PolarHBondContact O-N 3.15Å; E42-W45 PolarHBondContact O-NE1 3.23Å
43N95Very high94.8Very high84 Ų84102.3 Ų102.345%0.44950%0.503SS..Hα-helixtrans-112.70.5-172.8-64.8-71.7000114.7M39 F40 W45 A46M39-N43 WeakPolarHBondContact O-CB 3.39Å; M39-N43 PolarHBondContact O-N 2.82Å; M39-N43 VanDerWaalsContact O-N 3.11Å; M39-N43 PolarHBondContact O-ND2 3.11Å; F40-N43 CarbonylContact O-C 3.55Å; F40-N43 PolarHBondContact O-N 3.28Å; N43-W45 PolarHBondContact O-N 2.81Å; N43-W45 VanDerWaalsContact O-N 3.08Å; N43-A46 VanDerWaalsContact O-CB 3.27Å; N43-A46 WeakPolarHBondContact O-CB 3.46Å; N43-A46 PolarHBondContact O-N 2.98Å
44W94Very high94.9Very high140 Ų140104.3 Ų104.353%0.5351%0.506SS..G310 helixtrans-56.1-32.5-175.972.8-94.1000112.8F40 A46 L47 I48F40-W44 WeakPolarHBondContact O-CA 3.47Å; F40-W44 WeakPolarHBondContact O-CB 3.47Å; F40-W44 PolarHBondContact O-N 3.08Å; W44-A46 PolarHBondContact O-N 3.23Å; W44-L47 VanDerWaalsContact O-CB 3.3Å; W44-L47 WeakPolarHBondContact O-CB 3.49Å; W44-L47 PolarHBondContact O-N 2.87Å; W44-I48 HydrophobicContact CE3-CG1 4.37Å; W44-I48 HydrophobicContact CH2-CD1 4.12Å; W44-I48 HydrophobicContact CZ3-CD1 3.79Å; W44-I48 HydrophobicContact CZ3-CG1 3.87Å
45W93.6Very high95Very high154 Ų15499.9 Ų99.958%0.58350%0.499SS*.G310 helixtrans-65.3-24.8-179.262.4-89.6000112.5E42 N43 L47 I48E42-W45 PolarHBondContact O-NE1 3.23Å; N43-W45 PolarHBondContact O-N 2.81Å; N43-W45 VanDerWaalsContact O-N 3.08Å; W45-L47 PolarHBondContact O-N 2.96Å; W45-I48 HydrophobicContact CB-CD1 3.78Å; W45-I48 VanDerWaalsContact O-CB 3.26Å; W45-I48 WeakPolarHBondContact O-CB 3.36Å; W45-I48 WeakPolarHBondContact O-CD1 3.27Å; W45-I48 VanDerWaalsContact O-CG1 3.23Å; W45-I48 WeakPolarHBondContact O-CG1 3.3Å; W45-I48 PolarHBondContact O-N 3.49Å; W45-I48 VanDerWaalsContact O-N 3.07Å
46A93.8Very high95Very high60 Ų60100 Ų10050%0.49650%0.504SS..G310 helixtrans-64.3-17.5172.800000112.4N43 W44 P49N43-A46 VanDerWaalsContact O-CB 3.27Å; N43-A46 WeakPolarHBondContact O-CB 3.46Å; N43-A46 PolarHBondContact O-N 2.98Å; W44-A46 PolarHBondContact O-N 3.23Å; A46-P49 WeakPolarHBondContact O-CD 3.34Å
47L92.5Very high95.1Very high97 Ų97103.3 Ų103.351%0.50851%0.51SS..G310 helixtrans-89.4-6.9176-57.3173.8000113.3F40 W44 W45 P49 V50 P51F40-L47 HydrophobicContact CE2-CD1 4.24Å; W44-L47 VanDerWaalsContact O-CB 3.3Å; W44-L47 WeakPolarHBondContact O-CB 3.49Å; W44-L47 PolarHBondContact O-N 2.87Å; W45-L47 PolarHBondContact O-N 2.96Å; L47-P49 VanDerWaalsContact C-N 3.31Å; L47-V50 WeakPolarHBondContact O-CB 3.25Å; L47-V50 WeakPolarHBondContact O-CG2 3.34Å; L47-V50 PolarHBondContact O-N 2.93Å; L47-P51 VanDerWaalsContact O-CD 3.3Å; L47-P51 WeakPolarHBondContact O-CD 3.26Å
48I93Very high95.1Very high74 Ų74105.2 Ų105.238%0.37951%0.51SS..THydrogen-bonded Turntrans-54.6-35.7177.9-68.9168.7000113.8W44 W45 V50 P51 I52W44-I48 HydrophobicContact CE3-CG1 4.37Å; W44-I48 HydrophobicContact CH2-CD1 4.12Å; W44-I48 HydrophobicContact CZ3-CD1 3.79Å; W44-I48 HydrophobicContact CZ3-CG1 3.87Å; W45-I48 HydrophobicContact CB-CD1 3.78Å; W45-I48 VanDerWaalsContact O-CB 3.26Å; W45-I48 WeakPolarHBondContact O-CB 3.36Å; W45-I48 WeakPolarHBondContact O-CD1 3.27Å; W45-I48 VanDerWaalsContact O-CG1 3.23Å; W45-I48 WeakPolarHBondContact O-CG1 3.3Å; W45-I48 PolarHBondContact O-N 3.49Å; W45-I48 VanDerWaalsContact O-N 3.07Å; I48-V50 PolarHBondContact O-N 2.71Å; I48-P51 WeakPolarHBondContact O-CD 3.43Å; I48-P51 VanDerWaalsContact O-CG 3.25Å; I48-P51 WeakPolarHBondContact O-CG 3.46Å; I48-I52 HydrophobicContact CG2-CD1 3.8Å; I48-I52 WeakPolarHBondContact O-CG1 3.15Å
49P94Very high95.1Very high61 Ų61105.4 Ų105.440%0.39651%0.512SS..Hα-helixtrans-60.1-27.5176.5-26.536.6000113.9A46 L47 I52 F53A46-P49 WeakPolarHBondContact O-CD 3.34Å; L47-P49 VanDerWaalsContact C-N 3.31Å; P49-I52 WeakPolarHBondContact O-CB 3.3Å; P49-I52 PolarHBondContact O-N 3Å; P49-F53 HydrophobicContact CB-CD2 4.08Å; P49-F53 HydrophobicContact CB-CE2 3.83Å; P49-F53 WeakPolarHBondContact O-CD2 3.23Å; P49-F53 PolarHBondContact O-N 3.43Å
50V94Very high95.2Very high95 Ų95102.2 Ų102.258%0.57651%0.506SS*.Hα-helixtrans-60.4-56.5-177-179.30000112.6L47 I48 I52 F53 Y54L47-V50 WeakPolarHBondContact O-CB 3.25Å; L47-V50 WeakPolarHBondContact O-CG2 3.34Å; L47-V50 PolarHBondContact O-N 2.93Å; I48-V50 PolarHBondContact O-N 2.71Å; V50-I52 PolarHBondContact O-N 3.34Å; V50-F53 PolarHBondContact O-N 3.33Å; V50-Y54 WeakPolarHBondContact O-CB 3.37Å; V50-Y54 PolarHBondContact O-N 2.94Å
51P95.5Very high95.2Very high73 Ų73100.8 Ų100.847%0.47450%0.502SS..Hα-helixtrans-64.1-28.7176.724.3-35.1000113.1L47 I48 S55L47-P51 VanDerWaalsContact O-CD 3.3Å; L47-P51 WeakPolarHBondContact O-CD 3.26Å; I48-P51 WeakPolarHBondContact O-CD 3.43Å; I48-P51 VanDerWaalsContact O-CG 3.25Å; I48-P51 WeakPolarHBondContact O-CG 3.46Å; P51-S55 WeakPolarHBondContact O-CB 3.49Å; P51-S55 PolarHBondContact O-N 3.2Å; P51-S55 PolarHBondContact O-OG 3.05Å
52I95.6Very high95.2Very high101 Ų101100.1 Ų100.152%0.51849%0.494SS..Hα-helixtrans-64.7-51.5175.8-64.5172.4000110.1I48 P49 V50 Y54 S55 L56I48-I52 HydrophobicContact CG2-CD1 3.8Å; I48-I52 WeakPolarHBondContact O-CG1 3.15Å; P49-I52 WeakPolarHBondContact O-CB 3.3Å; P49-I52 PolarHBondContact O-N 3Å; V50-I52 PolarHBondContact O-N 3.34Å; I52-Y54 VanDerWaalsContact C-N 3.31Å; I52-Y54 PolarHBondContact O-N 3.07Å; I52-S55 PolarHBondContact O-N 3.46Å; I52-L56 PolarHBondContact O-N 2.98Å
53F96.5Very high95.1Very high139 Ų13999 Ų9961%0.6149%0.489SS*.Hα-helixtrans-64.2-37.6178.2-74.2-60.3000112.3P49 V50 L56 R57P49-F53 HydrophobicContact CB-CD2 4.08Å; P49-F53 HydrophobicContact CB-CE2 3.83Å; P49-F53 WeakPolarHBondContact O-CD2 3.23Å; P49-F53 PolarHBondContact O-N 3.43Å; V50-F53 PolarHBondContact O-N 3.33Å; F53-L56 PolarHBondContact O-N 3.28Å; F53-R57 WeakPolarHBondContact O-CB 3.47Å; F53-R57 PolarHBondContact O-N 3.3Å
54Y96.6Very high95.1Very high136 Ų13699.7 Ų99.753%0.53349%0.489SS..Hα-helixtrans-59.7-46.4173.4-178.9-91.4000111.6V50 I52 L56 R57 E58V50-Y54 WeakPolarHBondContact O-CB 3.37Å; V50-Y54 PolarHBondContact O-N 2.94Å; I52-Y54 VanDerWaalsContact C-N 3.31Å; I52-Y54 PolarHBondContact O-N 3.07Å; Y54-L56 PolarHBondContact O-N 3.17Å; Y54-R57 WeakPolarHBondContact O-CB 3.03Å; Y54-R57 PolarHBondContact O-N 2.95Å; Y54-E58 PolarHBondContact O-N 3.47Å
55S96.7Very high95Very high68 Ų6897.8 Ų97.848%0.47649%0.486SS..Hα-helixtrans-65.6-39.6179.4-55.60000111.9P51 I52 E58 Y59P51-S55 WeakPolarHBondContact O-CB 3.49Å; P51-S55 PolarHBondContact O-N 3.2Å; P51-S55 PolarHBondContact O-OG 3.05Å; I52-S55 PolarHBondContact O-N 3.46Å; S55-E58 PolarHBondContact O-N 3.4Å; S55-Y59 WeakPolarHBondContact O-CB 3.44Å; S55-Y59 PolarHBondContact O-N 2.69Å
56L97Very high94.9Very high111 Ų11196.9 Ų96.958%0.58149%0.486SS*.Hα-helixtrans-62.7-43.2175.3-175.966.8000111.6I52 F53 Y54 Y59 G60I52-L56 PolarHBondContact O-N 2.98Å; F53-L56 PolarHBondContact O-N 3.28Å; Y54-L56 PolarHBondContact O-N 3.17Å; L56-Y59 PolarHBondContact O-N 3.18Å; L56-G60 PolarHBondContact O-N 3.42Å
57R95.8Very high94.7Very high160 Ų160103.6 Ų103.660%0.60450%0.499SS*.Hα-helixtrans-59-49.5173.7178.3-165.2174.4-105.7-1.9110.7F53 Y54 Y59 G60 M61F53-R57 WeakPolarHBondContact O-CB 3.47Å; F53-R57 PolarHBondContact O-N 3.3Å; Y54-R57 WeakPolarHBondContact O-CB 3.03Å; Y54-R57 PolarHBondContact O-N 2.95Å; R57-Y59 VanDerWaalsContact C-N 3.3Å; R57-Y59 PolarHBondContact O-N 2.96Å; R57-G60 PolarHBondContact O-N 3.4Å; R57-M61 WeakPolarHBondContact O-CG 3.49Å; R57-M61 PolarHBondContact O-N 3.28Å
58E96.8Very high94.5Very high73 Ų73105.1 Ų105.134%0.34151%0.507SS..Hα-helixtrans-61.4-40.4-179.2-165.1-173.3148.800111.8Y54 S55 M61 K62Y54-E58 PolarHBondContact O-N 3.47Å; S55-E58 PolarHBondContact O-N 3.4Å; E58-M61 PolarHBondContact O-N 2.9Å; E58-K62 HydrophobicContact CG-CD 4.41Å; E58-K62 WeakPolarHBondContact O-CB 3.39Å; E58-K62 WeakPolarHBondContact O-CG 3.47Å; E58-K62 PolarHBondContact O-N 3.21Å; E58-K62 WeakPolarHBondContact OE1-CE 3.44Å; E58-K62 IonicContact OE1-NZ 3.3Å; E58-K62 PolarHBondContact OE1-NZ 3.35Å
59Y96.6Very high94.2Very high140 Ų140109.5 Ų109.555%0.54952%0.519SS..Hα-helixtrans-60.1-47.2172.9177.3-98.2000112S55 L56 R57 M61 K62 Q63S55-Y59 WeakPolarHBondContact O-CB 3.44Å; S55-Y59 PolarHBondContact O-N 2.69Å; L56-Y59 PolarHBondContact O-N 3.18Å; R57-Y59 VanDerWaalsContact C-N 3.3Å; R57-Y59 PolarHBondContact O-N 2.96Å; Y59-M61 PolarHBondContact O-N 3.32Å; Y59-K62 PolarHBondContact O-N 2.64Å; Y59-Q63 HydrophobicContact CD1-CG 4.23Å; Y59-Q63 HydrophobicContact CD2-CG 4.45Å; Y59-Q63 HydrophobicContact CE1-CG 3.8Å; Y59-Q63 HydrophobicContact CE2-CG 4.05Å; Y59-Q63 VanDerWaalsContact CE2-NE2 3.3Å; Y59-Q63 VanDerWaalsContact CZ-NE2 3.31Å; Y59-Q63 WeakPolarHBondContact O-CG 3.4Å; Y59-Q63 PolarHBondContact O-N 3Å; Y59-Q63 PolarHBondContact OH-NE2 3.4Å; Y59-Q63 VanDerWaalsContact OH-NE2 3.09Å
60G96.4Very high93.6Very high37 Ų37115 Ų11538%0.38154%0.536SS..Hα-helixtrans-57.5-47.817700000112.8L56 R57 K62 Q63 E64L56-G60 PolarHBondContact O-N 3.42Å; R57-G60 PolarHBondContact O-N 3.4Å; G60-K62 PolarHBondContact O-N 3.46Å; G60-Q63 PolarHBondContact O-N 3Å; G60-E64 PolarHBondContact O-N 3.36Å
61M95.8Very high93.1Very high96 Ų96115.4 Ų115.447%0.47354%0.535SS..Hα-helixtrans-60.8-43.4177.1-67-63.8-54.700112.1R57 E58 Y59 Q63 E64 E65R57-M61 WeakPolarHBondContact O-CG 3.49Å; R57-M61 PolarHBondContact O-N 3.28Å; E58-M61 PolarHBondContact O-N 2.9Å; Y59-M61 PolarHBondContact O-N 3.32Å; M61-Q63 VanDerWaalsContact C-N 3.34Å; M61-Q63 PolarHBondContact O-N 2.92Å; M61-E64 PolarHBondContact O-N 2.96Å; M61-E65 WeakPolarHBondContact O-CB 3.47Å; M61-E65 PolarHBondContact O-N 3.24Å
62K95.5Very high92.5Very high105 Ų105116.9 Ų116.946%0.45755%0.545SS..Hα-helixtrans-63.9-37.3177.3-78.8172.6170.7167.40112.4E58 Y59 G60 K66E58-K62 HydrophobicContact CG-CD 4.41Å; E58-K62 WeakPolarHBondContact O-CB 3.39Å; E58-K62 WeakPolarHBondContact O-CG 3.47Å; E58-K62 PolarHBondContact O-N 3.21Å; E58-K62 WeakPolarHBondContact OE1-CE 3.44Å; E58-K62 IonicContact OE1-NZ 3.3Å; E58-K62 PolarHBondContact OE1-NZ 3.35Å; Y59-K62 PolarHBondContact O-N 2.64Å; G60-K62 PolarHBondContact O-N 3.46Å; K62-K66 WeakPolarHBondContact O-CB 3.46Å; K62-K66 VanDerWaalsContact O-CG 3.26Å; K62-K66 WeakPolarHBondContact O-CG 3.26Å; K62-K66 PolarHBondContact O-N 3.4Å; K62-K66 VanDerWaalsContact O-N 3.07Å
63Q93.4Very high91.9Very high75 Ų75115.4 Ų115.435%0.3555%0.548SS..Hα-helixtrans-70.8-40.2176.9-68.8-64.4-9.800111.8Y59 G60 M61 K66 R67Y59-Q63 HydrophobicContact CD1-CG 4.23Å; Y59-Q63 HydrophobicContact CD2-CG 4.45Å; Y59-Q63 HydrophobicContact CE1-CG 3.8Å; Y59-Q63 HydrophobicContact CE2-CG 4.05Å; Y59-Q63 VanDerWaalsContact CE2-NE2 3.3Å; Y59-Q63 VanDerWaalsContact CZ-NE2 3.31Å; Y59-Q63 WeakPolarHBondContact O-CG 3.4Å; Y59-Q63 PolarHBondContact O-N 3Å; Y59-Q63 PolarHBondContact OH-NE2 3.4Å; Y59-Q63 VanDerWaalsContact OH-NE2 3.09Å; G60-Q63 PolarHBondContact O-N 3Å; M61-Q63 VanDerWaalsContact C-N 3.34Å; M61-Q63 PolarHBondContact O-N 2.92Å; Q63-K66 PolarHBondContact O-N 2.96Å; Q63-R67 WeakPolarHBondContact O-CB 3.34Å; Q63-R67 PolarHBondContact O-N 3.12Å
64E93.5Very high91.2Very high98 Ų98112.1 Ų112.146%0.45855%0.546SS..Hα-helixtrans-60.8-47.6174.2-177.9173.3-156.300111.4G60 M61 K66 R67 L68G60-E64 PolarHBondContact O-N 3.36Å; M61-E64 PolarHBondContact O-N 2.96Å; E64-K66 VanDerWaalsContact C-N 3.34Å; E64-K66 PolarHBondContact O-N 2.95Å; E64-R67 PolarHBondContact O-N 3.36Å; E64-R67 VanDerWaalsContact O-N 3.12Å; E64-L68 HydrophobicContact CG-CD1 4.26Å; E64-L68 WeakPolarHBondContact O-CG 3.47Å; E64-L68 PolarHBondContact O-N 3.46Å
65E93.5Very high90.4Very high100 Ų100110.8 Ų110.847%0.46754%0.543SS..Hα-helixtrans-60.2-42.5177-168.4-174.1174.900111.9M61 R67 L68 R69M61-E65 WeakPolarHBondContact O-CB 3.47Å; M61-E65 PolarHBondContact O-N 3.24Å; E65-R67 VanDerWaalsContact C-N 3.33Å; E65-R67 PolarHBondContact O-N 3.45Å; E65-L68 PolarHBondContact O-N 3.07Å; E65-R69 WeakPolarHBondContact O-CG 3.33Å; E65-R69 PolarHBondContact O-N 2.98Å; E65-R69 IonicContact OE1-CZ 2.69Å; E65-R69 IonicContact OE1-NE 3.62Å; E65-R69 IonicContact OE1-NH2 2.64Å; E65-R69 PolarHBondContact OE1-NH2 3.32Å
66K91.4Very high89.5Confident135 Ų135111 Ų11159%0.58755%0.549SS*.Hα-helixtrans-61.5-39.4174.5-77.2175.7-177.6-1770112.4K62 Q63 E64 R69K62-K66 WeakPolarHBondContact O-CB 3.46Å; K62-K66 VanDerWaalsContact O-CG 3.26Å; K62-K66 WeakPolarHBondContact O-CG 3.26Å; K62-K66 PolarHBondContact O-N 3.4Å; K62-K66 VanDerWaalsContact O-N 3.07Å; Q63-K66 PolarHBondContact O-N 2.96Å; E64-K66 VanDerWaalsContact C-N 3.34Å; E64-K66 PolarHBondContact O-N 2.95Å; K66-R69 PolarHBondContact O-N 3.45Å
67R88Confident88.6Confident202 Ų202113 Ų11376%0.76256%0.561SS**Hα-helixtrans-69.2-33.4179.3-166.3-175.478.2-179.72.1112.5Q63 E64 E65 R69Q63-R67 WeakPolarHBondContact O-CB 3.34Å; Q63-R67 PolarHBondContact O-N 3.12Å; E64-R67 PolarHBondContact O-N 3.36Å; E64-R67 VanDerWaalsContact O-N 3.12Å; E65-R67 VanDerWaalsContact C-N 3.33Å; E65-R67 PolarHBondContact O-N 3.45Å; R67-R69 VanDerWaalsContact C-N 3.3Å
68L89.3Confident87.4Confident129 Ų129111.5 Ų111.568%0.67557%0.565SS**Hα-helixtrans-72.9-22.8177.8-69.9171.9000112.8E64 E65E64-L68 HydrophobicContact CG-CD1 4.26Å; E64-L68 WeakPolarHBondContact O-CG 3.47Å; E64-L68 PolarHBondContact O-N 3.46Å; E65-L68 PolarHBondContact O-N 3.07Å
69R87.2Confident85.7Confident166 Ų166117.8 Ų117.863%0.62661%0.607SS**SBendtrans-76.4131.5175.8-68.3178.1-173.3-169.73.9110.2E65 K66 R67 N71E65-R69 WeakPolarHBondContact O-CG 3.33Å; E65-R69 PolarHBondContact O-N 2.98Å; E65-R69 IonicContact OE1-CZ 2.69Å; E65-R69 IonicContact OE1-NE 3.62Å; E65-R69 IonicContact OE1-NH2 2.64Å; E65-R69 PolarHBondContact OE1-NH2 3.32Å; K66-R69 PolarHBondContact O-N 3.45Å; R67-R69 VanDerWaalsContact C-N 3.3Å; R69-N71 PolarHBondContact O-N 3.09Å
70K81.5Confident85.2Confident176 Ų176116.7 Ų116.777%0.76561%0.61SS**  trans-60.5133.5174.4-68.2-174.5-179.6-175.60110P72 F75K70-P72 WeakPolarHBondContact O-CD 3.42Å; K70-F75 HydrophobicContact CB-CE2 4.19Å; K70-F75 HydrophobicContact CD-CE2 4.36Å; K70-F75 HydrophobicContact CD-CZ 4.28Å
71N83.6Confident84.6Confident103 Ų103120.8 Ų120.855%0.55162%0.622SS**  trans-84.9113.8171.7-177.72.7000109.2R69 A73 A74 F75R69-N71 PolarHBondContact O-N 3.09Å; N71-A73 PolarHBondContact O-N 3.4Å; N71-A73 WeakPolarHBondContact OD1-CB 3.48Å; N71-A73 PolarHBondContact OD1-N 3.13Å; N71-A73 VanDerWaalsContact OD1-N 3.1Å; N71-A74 WeakPolarHBondContact O-CB 3.32Å; N71-A74 PolarHBondContact O-N 3.03Å; N71-F75 WeakPolarHBondContact O-CD2 3.37Å
72P81.2Confident84Confident105 Ų105122.2 Ų122.268%0.68263%0.631SS**G310 helixtrans-60.2-27.2179.424.6-33.6000112.8K70 A74 F75K70-P72 WeakPolarHBondContact O-CD 3.42Å; P72-A74 PolarHBondContact O-N 3.23Å; P72-F75 PolarHBondContact O-N 3.18Å; P72-F75 VanDerWaalsContact O-N 3.13Å
73A83.9Confident83.3Confident69 Ų69123.2 Ų123.257%0.5764%0.641SS**G310 helixtrans-65.2-21.1176.700000113.3N71 F75N71-A73 PolarHBondContact O-N 3.4Å; N71-A73 WeakPolarHBondContact OD1-CB 3.48Å; N71-A73 PolarHBondContact OD1-N 3.13Å; N71-A73 VanDerWaalsContact OD1-N 3.1Å; A73-F75 PolarHBondContact O-N 3.1Å
74A80.9Confident82.7Confident70 Ų70126.3 Ų126.358%0.57966%0.659SS**G310 helixtrans-71.3-18.5176.100000113N71 P72N71-A74 WeakPolarHBondContact O-CB 3.32Å; N71-A74 PolarHBondContact O-N 3.03Å; P72-A74 PolarHBondContact O-N 3.23Å
75F80.6Confident82Confident108 Ų108128.1 Ų128.147%0.47467%0.672SS.*G310 helixtrans-107.83.8-178.7-51.9-77.9000112.6K70 N71 P72 A73 N77 D78K70-F75 HydrophobicContact CB-CE2 4.19Å; K70-F75 HydrophobicContact CD-CE2 4.36Å; K70-F75 HydrophobicContact CD-CZ 4.28Å; N71-F75 WeakPolarHBondContact O-CD2 3.37Å; P72-F75 PolarHBondContact O-N 3.18Å; P72-F75 VanDerWaalsContact O-N 3.13Å; A73-F75 PolarHBondContact O-N 3.1Å; F75-N77 PolarHBondContact O-N 3.06Å; F75-D78 PolarHBondContact O-N 3.37Å
76A77.7Confident81.1Confident73 Ų73130.1 Ų130.160%0.60369%0.687SS**THydrogen-bonded Turntrans-67.1-25.2-174.400000113.4
77N78.5Confident80.4Confident154 Ų154129.8 Ų129.882%0.82470%0.695SS**THydrogen-bonded Turntrans-114.115.2-179.3-61.8-25.2000112.5F75 V79F75-N77 PolarHBondContact O-N 3.06Å; N77-V79 PolarHBondContact O-N 3.3Å
78D70.6Confident79.7Confident128 Ų128123.8 Ų123.868%0.68469%0.689SS**  trans-80.276.4170.8-106.3-9.8000108.3F75F75-D78 PolarHBondContact O-N 3.37Å
79V61.6Low78.8Confident204 Ų204123.3 Ų123.3100%1.23669%0.69SS**  trans-139.40170.2-179.80000109.2N77N77-V79 PolarHBondContact O-N 3.3Å

Retrieved 79 of 79 residues in 107.4 ms (Link to these results)