A0A077ZAI7_TRITR Loading...

U6 snRNA-associated Sm-like protein LSm5

Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

AlphaFold DB , UniProt , Accession A0A077ZAI7, Species TRITR (Trichuris trichiura, Whipworm), Gene LSM5, Length 92 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M64.5Low67Low243 Ų243129.3 Ų129.3100%1.19780%0.799SS**  01130-72.3-167-86.800107.1
2A67.2Low68.3Low104 Ų104129.8 Ų129.886%0.8680%0.802SS**PPolyproline II helixtrans-80.4127.8178.900000109.3
3T65.4Low69.7Low128 Ų128124.4 Ų124.479%0.78576%0.764SS**PPolyproline II helixtrans-67.5133.1170.345.30000109.2S5T3-S5 PolarHBondContact O-N 2.63Å
4P72.8Confident71.2Confident122 Ų122123.8 Ų123.879%0.79275%0.753SS**PPolyproline II helixtrans-61.2131.217225-30.9000109.3
5S64.4Low72.6Confident112 Ų112122.1 Ų122.178%0.78375%0.746SS**PPolyproline II helixtrans-56.3138.7170.5-83.80000109.5T3 A7T3-S5 PolarHBondContact O-N 2.63Å; S5-A7 PolarHBondContact O-N 3.28Å
6P69Low74Confident119 Ų119119.3 Ų119.377%0.77372%0.724SS**PPolyproline II helixtrans-57.4129.6173.323.6-31000108.9Q8P6-Q8 PolarHBondContact O-N 3.23Å
7A68Low75.2Confident103 Ų103117 Ų11785%0.85170%0.704SS**  trans-55.6111.9172.900000108.4S5 N9S5-A7 PolarHBondContact O-N 3.28Å; A7-N9 PolarHBondContact O-N 3.24Å
8Q61.1Low76.2Confident181 Ų181114.6 Ų114.685%0.84669%0.686SS**  trans-68.2118.6178-167.3161.49.300107.5P6 P10P6-Q8 PolarHBondContact O-N 3.23Å; Q8-P10 WeakPolarHBondContact O-CD 3.36Å
9N69.6Low77.1Confident123 Ų123109.5 Ų109.566%0.65866%0.655SS**  trans-61.2111.7176.7-173.9-1.3000108.1A7 S11A7-N9 PolarHBondContact O-N 3.24Å; N9-S11 VanDerWaalsContact CG-OG 3.3Å; N9-S11 PolarHBondContact ND2-OG 3.35Å; N9-S11 PolarHBondContact O-N 3.36Å; N9-S11 WeakPolarHBondContact OD1-CB 3.47Å; N9-S11 PolarHBondContact OD1-N 3.15Å; N9-S11 PolarHBondContact OD1-OG 3.25Å; N9-S11 VanDerWaalsContact OD1-OG 3.08Å
10P64.3Low78.1Confident117 Ų117108.7 Ų108.776%0.7665%0.647SS**  trans-76.90-173.632.8-35.1000112.3Q8 T12Q8-P10 WeakPolarHBondContact O-CD 3.36Å; P10-T12 PolarHBondContact O-N 3.24Å
11S71Confident79Confident70 Ų70109.5 Ų109.549%0.4964%0.642SS.*  trans-67.6103.7-175.765.10000110.9N9 L13N9-S11 VanDerWaalsContact CG-OG 3.3Å; N9-S11 PolarHBondContact ND2-OG 3.35Å; N9-S11 PolarHBondContact O-N 3.36Å; N9-S11 WeakPolarHBondContact OD1-CB 3.47Å; N9-S11 PolarHBondContact OD1-N 3.15Å; N9-S11 PolarHBondContact OD1-OG 3.25Å; N9-S11 VanDerWaalsContact OD1-OG 3.08Å; S11-L13 PolarHBondContact O-N 3.24Å
12T82.1Confident80.5Confident135 Ų13598.3 Ų98.383%0.82859%0.588SS**  trans-76.99.5164.257.70000112.3P10 L14P10-T12 PolarHBondContact O-N 3.24Å; T12-L14 PolarHBondContact O-N 2.74Å
13L86.3Confident81.9Confident60 Ų6096.9 Ų96.931%0.31457%0.565SS.*  trans-73.9121.5-172.7-172.170.2000110.2S11 E17 L18 K21S11-L13 PolarHBondContact O-N 3.24Å; L13-E17 HydrophobicContact CD1-CB 4Å; L13-E17 HydrophobicContact CD1-CG 3.77Å; L13-E17 WeakPolarHBondContact CD1-OE1 3.38Å; L13-L18 HydrophobicContact CD2-CB 3.64Å; L13-L18 HydrophobicContact CD2-CD1 3.62Å; L13-L18 HydrophobicContact CD2-CG 4.1Å; L13-L18 HydrophobicContact CG-CB 4.11Å; L13-K21 HydrophobicContact CD1-CD 4.25Å
14L91.9Very high83.5Confident116 Ų11693.5 Ų93.561%0.60756%0.555SS**  trans-72.9145.7175-64.2175.1000110.1T12 L16 E17 L18T12-L14 PolarHBondContact O-N 2.74Å; L14-L16 VanDerWaalsContact C-N 3.31Å; L14-L16 PolarHBondContact O-N 2.88Å; L14-E17 HydrophobicContact CB-CB 4.04Å; L14-E17 WeakPolarHBondContact O-CA 3.4Å; L14-E17 VanDerWaalsContact O-CB 3.32Å; L14-E17 WeakPolarHBondContact O-CB 3.48Å; L14-E17 PolarHBondContact O-N 3.44Å; L14-L18 PolarHBondContact O-N 2.9Å
15P91.8Very high84.7Confident99 Ų9990.5 Ų90.564%0.64354%0.537SS*.Hα-helixtrans-54.8-42.9-179-28.735.6000114E17 L18 I19P15-E17 VanDerWaalsContact C-N 3.33Å; P15-L18 WeakPolarHBondContact O-CB 3.48Å; P15-L18 PolarHBondContact O-N 2.83Å; P15-I19 WeakPolarHBondContact O-CG1 3.49Å; P15-I19 PolarHBondContact O-N 2.87Å
16L94.4Very high86.2Confident77 Ų7790.7 Ų90.740%0.40352%0.524SS..Hα-helixtrans-69.5-31.9176.5-61.1-177000112.2L14 L18 I19 D20 F44 V48L14-L16 VanDerWaalsContact C-N 3.31Å; L14-L16 PolarHBondContact O-N 2.88Å; L16-L18 VanDerWaalsContact C-N 3.3Å; L16-L18 PolarHBondContact O-N 2.77Å; L16-I19 HydrophobicContact CD2-CD1 4.25Å; L16-I19 PolarHBondContact O-N 2.9Å; L16-D20 WeakPolarHBondContact O-CB 3.48Å; L16-D20 PolarHBondContact O-N 2.86Å; L16-F44 HydrophobicContact CB-CE2 4.49Å; L16-F44 HydrophobicContact CD2-CE2 4.05Å; L16-V48 HydrophobicContact CD2-CG2 4.28Å
17E94.2Very high87.6Confident80 Ų8085.1 Ų85.137%0.37449%0.488SS..Hα-helixtrans-66.6-34.5174.1-168.1-165.7151.600111.3L13 L14 P15 K21L13-E17 HydrophobicContact CD1-CB 4Å; L13-E17 HydrophobicContact CD1-CG 3.77Å; L13-E17 WeakPolarHBondContact CD1-OE1 3.38Å; L14-E17 HydrophobicContact CB-CB 4.04Å; L14-E17 WeakPolarHBondContact O-CA 3.4Å; L14-E17 VanDerWaalsContact O-CB 3.32Å; L14-E17 WeakPolarHBondContact O-CB 3.48Å; L14-E17 PolarHBondContact O-N 3.44Å; P15-E17 VanDerWaalsContact C-N 3.33Å; E17-K21 WeakPolarHBondContact O-CG 3.38Å; E17-K21 PolarHBondContact O-N 2.88Å; E17-K21 WeakPolarHBondContact OE1-CE 3.38Å; E17-K21 IonicContact OE1-NZ 2.63Å; E17-K21 PolarHBondContact OE1-NZ 2.8Å
18L93.1Very high89Confident74 Ų7482.5 Ų82.539%0.38746%0.456SS..Hα-helixtrans-63.7-45.2172.3177.961.1000111.3L13 L14 P15 L16 K21 C22 P85L13-L18 HydrophobicContact CD2-CB 3.64Å; L13-L18 HydrophobicContact CD2-CD1 3.62Å; L13-L18 HydrophobicContact CD2-CG 4.1Å; L13-L18 HydrophobicContact CG-CB 4.11Å; L14-L18 PolarHBondContact O-N 2.9Å; P15-L18 WeakPolarHBondContact O-CB 3.48Å; P15-L18 PolarHBondContact O-N 2.83Å; L16-L18 VanDerWaalsContact C-N 3.3Å; L16-L18 PolarHBondContact O-N 2.77Å; L18-K21 PolarHBondContact O-N 2.78Å; L18-C22 PolarHBondContact O-N 2.82Å; L18-C22 PolarHBondContact O-SG 2.79Å; L18-P85 HydrophobicContact CD1-CG 4.36Å; L18-P85 HydrophobicContact CG-CG 4.49Å
19I94.9Very high90.8Very high18 Ų1873.9 Ų73.99%0.09242%0.415CS..Hα-helixtrans-67.2-41.2-179.2-60.5166.5000110.8P15 L16 K21 C22 L41 F44 V48 L83P15-I19 WeakPolarHBondContact O-CG1 3.49Å; P15-I19 PolarHBondContact O-N 2.87Å; L16-I19 HydrophobicContact CD2-CD1 4.25Å; L16-I19 PolarHBondContact O-N 2.9Å; I19-K21 VanDerWaalsContact C-N 3.28Å; I19-K21 PolarHBondContact O-N 2.74Å; I19-C22 WeakPolarHBondContact O-CA 3.49Å; I19-C22 VanDerWaalsContact O-CB 3.28Å; I19-C22 WeakPolarHBondContact O-CB 3.35Å; I19-C22 PolarHBondContact O-N 2.85Å; I19-L41 HydrophobicContact CG2-CD2 3.88Å; I19-L41 WeakPolarHBondContact O-CD2 3.23Å; I19-F44 HydrophobicContact CB-CE1 4.24Å; I19-F44 HydrophobicContact CB-CZ 4.21Å; I19-F44 HydrophobicContact CG2-CD1 3.62Å; I19-F44 HydrophobicContact CG2-CD2 4.23Å; I19-F44 HydrophobicContact CG2-CE1 3.71Å; I19-F44 HydrophobicContact CG2-CE2 4.32Å; I19-F44 HydrophobicContact CG2-CG 3.91Å; I19-F44 HydrophobicContact CG2-CZ 4.06Å; I19-V48 HydrophobicContact CD1-CG1 4.32Å; I19-L83 HydrophobicContact CD1-CD1 3.46Å; I19-L83 VanDerWaalsContact CD1-CD1 3.46Å; I19-L83 HydrophobicContact CG1-CD1 3.8Å
20D96.7Very high92.1Very high93 Ų9370.1 Ų70.150%0.49740%0.395SS..Hα-helixtrans-55.9-43174.6-173.972.2000112.1L16 C22 I23 F44L16-D20 WeakPolarHBondContact O-CB 3.48Å; L16-D20 PolarHBondContact O-N 2.86Å; D20-C22 PolarHBondContact O-N 3.36Å; D20-C22 VanDerWaalsContact O-N 3.11Å; D20-I23 WeakPolarHBondContact O-CB 3.04Å; D20-I23 VanDerWaalsContact O-CG1 3.32Å; D20-I23 WeakPolarHBondContact O-CG1 3.46Å; D20-I23 PolarHBondContact O-N 3.15Å; D20-I23 VanDerWaalsContact O-N 3.11Å; D20-F44 HydrophobicContact CB-CE1 4.2Å; D20-F44 HydrophobicContact CB-CZ 4.24Å
21K95.6Very high93.7Very high125 Ų12565.7 Ų65.754%0.54336%0.364SS..THydrogen-bonded Turntrans-64.4-15.2174.2-72.4173.8-175.4169.40114.3L13 E17 L18 I19L13-K21 HydrophobicContact CD1-CD 4.25Å; E17-K21 WeakPolarHBondContact O-CG 3.38Å; E17-K21 PolarHBondContact O-N 2.88Å; E17-K21 WeakPolarHBondContact OE1-CE 3.38Å; E17-K21 IonicContact OE1-NZ 2.63Å; E17-K21 PolarHBondContact OE1-NZ 2.8Å; L18-K21 PolarHBondContact O-N 2.78Å; I19-K21 VanDerWaalsContact C-N 3.28Å; I19-K21 PolarHBondContact O-N 2.74Å
22C96.2Very high94.9Very high9 Ų968.8 Ų68.86%0.06137%0.369CS..THydrogen-bonded Turntrans-90.2-5.6178-58.50000113.1L18 I19 D20 G24 S25 L27 L41 P85L18-C22 PolarHBondContact O-N 2.82Å; L18-C22 PolarHBondContact O-SG 2.79Å; I19-C22 WeakPolarHBondContact O-CA 3.49Å; I19-C22 VanDerWaalsContact O-CB 3.28Å; I19-C22 WeakPolarHBondContact O-CB 3.35Å; I19-C22 PolarHBondContact O-N 2.85Å; D20-C22 PolarHBondContact O-N 3.36Å; D20-C22 VanDerWaalsContact O-N 3.11Å; C22-G24 PolarHBondContact O-N 3.4Å; C22-S25 WeakPolarHBondContact O-CA 3.39Å; C22-S25 VanDerWaalsContact O-CB 3.29Å; C22-S25 WeakPolarHBondContact O-CB 3.34Å; C22-S25 PolarHBondContact O-N 2.97Å; C22-L27 HydrophobicContact CB-CD1 4.39Å; C22-L41 HydrophobicContact CB-CD2 3.86Å; C22-P85 VanDerWaalsContact SG-CB 3.56Å; C22-P85 WeakPolarHBondContact SG-CG 3.25Å
23I97.7Very high95.5Very high74 Ų7466.1 Ų66.138%0.37937%0.368SS..THydrogen-bonded Turntrans-59.7132.7178.5-64.5170.3000109.6D20 S25 L41 F44D20-I23 WeakPolarHBondContact O-CB 3.04Å; D20-I23 VanDerWaalsContact O-CG1 3.32Å; D20-I23 WeakPolarHBondContact O-CG1 3.46Å; D20-I23 PolarHBondContact O-N 3.15Å; D20-I23 VanDerWaalsContact O-N 3.11Å; I23-S25 VanDerWaalsContact C-N 3.26Å; I23-S25 PolarHBondContact O-N 2.82Å; I23-L41 HydrophobicContact CG1-CD2 3.96Å; I23-L41 HydrophobicContact CG1-CG 4.14Å; I23-F44 HydrophobicContact CD1-CD1 4.49Å; I23-F44 HydrophobicContact CD1-CE1 4.19Å
24G98Very high95.9Very high56 Ų5666.6 Ų66.658%0.57737%0.371SS*.THydrogen-bonded Turntrans79.30.2-173.200000114.7C22 L41C22-G24 PolarHBondContact O-N 3.4Å; G24-L41 PolarHBondContact N-O 3.21Å
25S97.9Very high96.1Very high59 Ų5964 Ų6441%0.41336%0.355SS..SBendtrans-111.2161.1178.6-58.40000112C22 I23 T40 L41C22-S25 WeakPolarHBondContact O-CA 3.39Å; C22-S25 VanDerWaalsContact O-CB 3.29Å; C22-S25 WeakPolarHBondContact O-CB 3.34Å; C22-S25 PolarHBondContact O-N 2.97Å; I23-S25 VanDerWaalsContact C-N 3.26Å; I23-S25 PolarHBondContact O-N 2.82Å; S25-T40 WeakPolarHBondContact O-CA 3.39Å; S25-L41 PolarHBondContact O-N 2.86Å
26K97.4Very high96.4Very high117 Ų11761.1 Ų61.151%0.50933%0.333SS..EExtended strand (participates in β ladder)trans-63.8138.5171.3-76.6-161.8175.5-170.30111.1V38 G39 G86K26-V38 HydrophobicContact CD-CG1 4.44Å; K26-G39 CarbonylContact C-O 3.6Å; K26-G39 WeakPolarHBondContact CA-O 3.45Å; K26-G86 WeakPolarHBondContact O-CA 3.12Å; K26-G86 PolarHBondContact O-N 3.16Å
27L97.5Very high96.6Very high1 Ų157.5 Ų57.51%0.00531%0.314CS..EExtended strand (participates in β ladder)trans-130.7128.7175.5-164.166.3000108.6C22 I29 V38 G39 L41 I50 L83 P85C22-L27 HydrophobicContact CB-CD1 4.39Å; L27-I29 HydrophobicContact CD2-CD1 4.11Å; L27-I29 HydrophobicContact CD2-CG1 4.04Å; L27-I29 HydrophobicContact CG-CG1 4.06Å; L27-V38 WeakPolarHBondContact O-CA 3.49Å; L27-G39 PolarHBondContact N-O 2.86Å; L27-G39 PolarHBondContact O-N 3.11Å; L27-G39 VanDerWaalsContact O-N 3.15Å; L27-L41 HydrophobicContact CB-CB 4.44Å; L27-L41 HydrophobicContact CD2-CB 4.39Å; L27-L41 HydrophobicContact CD2-CD2 4.29Å; L27-I50 HydrophobicContact CD2-CD1 4.3Å; L27-L83 HydrophobicContact CD1-CB 4.28Å; L27-L83 HydrophobicContact CD2-CD2 3.9Å; L27-L83 HydrophobicContact CG-CD2 4.44Å; L27-P85 HydrophobicContact CD1-CG 4.47Å
28W98.1Very high96.8Very high48 Ų4854 Ų5418%0.18230%0.298CS..EExtended strand (participates in β ladder)trans-98.5119.9167.8175.124.4000108.9E36 L37 V38 I84 P90W28-E36 WeakPolarHBondContact CZ2-OE2 3.47Å; W28-E36 PolarHBondContact NE1-OE2 3.46Å; W28-L37 CarbonylContact C-O 3.59Å; W28-L37 WeakPolarHBondContact CA-O 3.15Å; W28-V38 HydrophobicContact CB-CG2 4.05Å; W28-V38 HydrophobicContact CG-CG2 4.01Å; W28-I84 HydrophobicContact CB-CB 4.16Å; W28-I84 HydrophobicContact CD2-CD1 3.83Å; W28-I84 HydrophobicContact CE3-CB 4.37Å; W28-I84 HydrophobicContact CE3-CD1 3.53Å; W28-I84 HydrophobicContact CE3-CG2 4.29Å; W28-I84 HydrophobicContact CG-CD1 4.39Å; W28-I84 HydrophobicContact CZ3-CD1 3.92Å; W28-I84 PolarHBondContact N-O 2.79Å; W28-I84 PolarHBondContact O-N 2.83Å; W28-P90 HydrophobicContact CZ2-CB 4.12Å
29I97.9Very high97Very high0 Ų050.6 Ų50.60%028%0.28CS..EExtended strand (participates in β ladder)trans-109.7123.5-175.9-53.1-173.5000108.5L27 E36 L37 I50 L52 L75 I80 M82 L83L27-I29 HydrophobicContact CD2-CD1 4.11Å; L27-I29 HydrophobicContact CD2-CG1 4.04Å; L27-I29 HydrophobicContact CG-CG1 4.06Å; I29-E36 CarbonylContact O-C 3.53Å; I29-E36 VanDerWaalsContact O-CA 3.23Å; I29-E36 WeakPolarHBondContact O-CA 3.29Å; I29-L37 HydrophobicContact CB-CB 4.43Å; I29-L37 PolarHBondContact N-O 3.26Å; I29-L37 PolarHBondContact O-N 3Å; I29-I50 HydrophobicContact CD1-CD1 3.9Å; I29-L52 HydrophobicContact CD1-CD1 3.61Å; I29-L52 HydrophobicContact CD1-CD2 4.17Å; I29-L52 HydrophobicContact CD1-CG 4.32Å; I29-L75 HydrophobicContact CD1-CD2 3.66Å; I29-L75 HydrophobicContact CG2-CD2 3.88Å; I29-I80 HydrophobicContact CG2-CD1 4.25Å; I29-I80 HydrophobicContact CG2-CG1 4.04Å; I29-I80 HydrophobicContact CG2-CG2 4.04Å; I29-M82 WeakPolarHBondContact CA-O 3.48Å; I29-L83 HydrophobicContact CB-CD2 4.14Å; I29-L83 HydrophobicContact CD1-CD2 3.91Å; I29-L83 HydrophobicContact CG1-CD2 3.6Å; I29-L83 HydrophobicContact CG2-CD2 3.86Å
30I97.4Very high97.2Very high45 Ų4551.5 Ų51.523%0.23129%0.287CS..EExtended strand (participates in β ladder)trans-98.6122171.3-57.4177000107.3E36 A81 M82 I84I30-E36 HydrophobicContact CG1-CG 4.36Å; I30-E36 HydrophobicContact CG2-CG 4.39Å; I30-A81 WeakPolarHBondContact O-CA 3.41Å; I30-A81 WeakPolarHBondContact O-CB 3.48Å; I30-A81 PolarHBondContact O-N 3.37Å; I30-M82 HydrophobicContact CB-CB 4.14Å; I30-M82 HydrophobicContact CD1-CB 4.32Å; I30-M82 HydrophobicContact CD1-SD 4.25Å; I30-M82 HydrophobicContact CG1-CB 4.47Å; I30-M82 PolarHBondContact N-O 3.4Å; I30-M82 PolarHBondContact O-N 2.92Å; I30-M82 VanDerWaalsContact O-N 3.17Å; I30-I84 HydrophobicContact CD1-CD1 3.82Å; I30-I84 HydrophobicContact CG1-CD1 4.32Å
31M97.1Very high97.2Very high23 Ų2347 Ų4711%0.11326%0.263CS..EExtended strand (participates in β ladder)trans-88.5160.9173.8-54.7-161.475.400110.9G33 K35 L37 L75 H79M31-G33 PolarHBondContact O-N 2.95Å; M31-K35 HydrophobicContact CB-CB 4.27Å; M31-K35 VanDerWaalsContact CB-O 3.29Å; M31-K35 WeakPolarHBondContact CB-O 3.48Å; M31-K35 HydrophobicContact CG-CB 4.32Å; M31-K35 PolarHBondContact N-O 2.92Å; M31-K35 HydrophobicContact SD-CB 4.16Å; M31-L37 HydrophobicContact CG-CD1 3.57Å; M31-L37 HydrophobicContact SD-CD1 3.46Å; M31-L37 WeakPolarHBondContact SD-CD1 3.41Å; M31-L75 HydrophobicContact CE-CD1 3.71Å; M31-L75 HydrophobicContact CE-CG 4.47Å; M31-L75 HydrophobicContact SD-CD1 3.91Å; M31-H79 CarbonylContact C-O 3.59Å; M31-H79 VanDerWaalsContact CA-O 3.3Å; M31-H79 WeakPolarHBondContact CA-O 3.01Å; M31-H79 HydrophobicContact CE-CB 3.56Å
32K96.5Very high97.4Very high136 Ų13644.5 Ų44.559%0.59126%0.255SS*.SBendtrans-61130.1161.8-65.7174.9-173.7160.90108.2S78 H79 A81K32-S78 PolarHBondContact NZ-O 3.11Å; K32-H79 PolarHBondContact N-O 2.91Å; K32-A81 HydrophobicContact CG-CB 4.32Å
33G94.8Very high97.5Very high78 Ų7844.9 Ų44.980%0.80426%0.261SS*.SBendtrans103-134.1-178.600000111.8M31M31-G33 PolarHBondContact O-N 2.95Å
34N94.8Very high97.5Very high71 Ų7144 Ų4438%0.3825%0.254SS..SBendtrans-116.213.9-167.965.4-36.3000113.4E59 S60N34-E59 WeakPolarHBondContact ND2-CG 3.43Å; N34-E59 WeakPolarHBondContact O-CA 3.32Å; N34-S60 WeakPolarHBondContact CB-O 3.3Å; N34-S60 PolarHBondContact ND2-O 3.11Å; N34-S60 PolarHBondContact O-N 3.18Å
35K96.7Very high97.4Very high60 Ų6044.2 Ų44.226%0.26124%0.242SC..EExtended strand (participates in β ladder)trans-112.7141.4-176.8-68.1-167.8177.6-142.40112.3M31 E57 Y58 E59M31-K35 HydrophobicContact CB-CB 4.27Å; M31-K35 VanDerWaalsContact CB-O 3.29Å; M31-K35 WeakPolarHBondContact CB-O 3.48Å; M31-K35 HydrophobicContact CG-CB 4.32Å; M31-K35 PolarHBondContact N-O 2.92Å; M31-K35 HydrophobicContact SD-CB 4.16Å; K35-E57 IonicContact NZ-OE1 3.55Å; K35-E57 PolarHBondContact NZ-OE1 3.43Å; K35-E57 IonicContact NZ-OE2 3.98Å; K35-Y58 CarbonylContact C-O 3.54Å; K35-Y58 VanDerWaalsContact CA-O 3.32Å; K35-Y58 WeakPolarHBondContact CA-O 3.46Å; K35-E59 VanDerWaalsContact CE-OE1 3.28Å; K35-E59 WeakPolarHBondContact CE-OE1 3.39Å; K35-E59 HydrophobicContact CG-CB 4.25Å; K35-E59 HydrophobicContact CG-CG 4.04Å; K35-E59 IonicContact NZ-OE1 2.7Å
36E97.6Very high97.3Very high39 Ų3948.3 Ų48.318%0.18226%0.259CS..EExtended strand (participates in β ladder)trans-139.2147.6173.5-58.4175.4-148.400109.1W28 I29 I30 E57 Y58 P90W28-E36 WeakPolarHBondContact CZ2-OE2 3.47Å; W28-E36 PolarHBondContact NE1-OE2 3.46Å; I29-E36 CarbonylContact O-C 3.53Å; I29-E36 VanDerWaalsContact O-CA 3.23Å; I29-E36 WeakPolarHBondContact O-CA 3.29Å; I30-E36 HydrophobicContact CG1-CG 4.36Å; I30-E36 HydrophobicContact CG2-CG 4.39Å; E36-E57 CarbonylContact O-C 3.46Å; E36-E57 WeakPolarHBondContact O-CA 3.32Å; E36-Y58 PolarHBondContact N-O 3.49Å; E36-Y58 PolarHBondContact O-N 3.36Å; E36-P90 WeakPolarHBondContact OE2-CD 3.46Å; E36-P90 WeakPolarHBondContact OE2-CG 3.43Å
37L98Very high97.2Very high1 Ų151.7 Ų51.71%0.00527%0.27CS..EExtended strand (participates in β ladder)trans-131139.2-177.7-59.693.6000109.9W28 I29 M31 V55 V56 E57 I73 L75W28-L37 CarbonylContact C-O 3.59Å; W28-L37 WeakPolarHBondContact CA-O 3.15Å; I29-L37 HydrophobicContact CB-CB 4.43Å; I29-L37 PolarHBondContact N-O 3.26Å; I29-L37 PolarHBondContact O-N 3Å; M31-L37 HydrophobicContact CG-CD1 3.57Å; M31-L37 HydrophobicContact SD-CD1 3.46Å; M31-L37 WeakPolarHBondContact SD-CD1 3.41Å; L37-V55 HydrophobicContact CB-CG1 4.11Å; L37-V55 HydrophobicContact CD2-CG1 3.88Å; L37-V55 HydrophobicContact CG-CG1 4.49Å; L37-V56 CarbonylContact C-O 3.59Å; L37-V56 WeakPolarHBondContact CA-O 3.32Å; L37-E57 HydrophobicContact CD2-CB 4.47Å; L37-E57 HydrophobicContact CG-CB 4.41Å; L37-E57 HydrophobicContact CG-CG 4.35Å; L37-I73 HydrophobicContact CD2-CD1 3.53Å; L37-L75 HydrophobicContact CD1-CD1 4.33Å; L37-L75 HydrophobicContact CD1-CD2 4.35Å; L37-L75 HydrophobicContact CD2-CD1 4.34Å
38V98.1Very high97.1Very high7 Ų753.1 Ų53.14%0.04228%0.279CS..EExtended strand (participates in β ladder)trans-121.3124.8169.5-179.80000107.6K26 L27 W28 V55 V56 Y58 G89K26-V38 HydrophobicContact CD-CG1 4.44Å; L27-V38 WeakPolarHBondContact O-CA 3.49Å; W28-V38 HydrophobicContact CB-CG2 4.05Å; W28-V38 HydrophobicContact CG-CG2 4.01Å; V38-V55 CarbonylContact O-C 3.58Å; V38-V55 WeakPolarHBondContact O-CA 3.43Å; V38-V56 PolarHBondContact N-O 3.3Å; V38-V56 PolarHBondContact O-N 2.77Å; V38-Y58 HydrophobicContact CB-CE2 4.43Å; V38-Y58 HydrophobicContact CG2-CE2 3.84Å; V38-G89 VanDerWaalsContact CG2-CA 3.49Å
39G98Very high97.1Very high2 Ų252.8 Ų52.82%0.02128%0.281CS..EExtended strand (participates in β ladder)trans-161.8173.3178.900000111.4K26 L27 D53K26-G39 CarbonylContact C-O 3.6Å; K26-G39 WeakPolarHBondContact CA-O 3.45Å; L27-G39 PolarHBondContact N-O 2.86Å; L27-G39 PolarHBondContact O-N 3.11Å; L27-G39 VanDerWaalsContact O-N 3.15Å; G39-D53 WeakPolarHBondContact CA-O 3.34Å
40T98.3Very high97.1Very high37 Ų3752.8 Ų52.823%0.22728%0.281CS..EExtended strand (participates in β ladder)trans-83.9124.4174.3-57.50000109.4S25 L42 L52 D53S25-T40 WeakPolarHBondContact O-CA 3.39Å; T40-L42 HydrophobicContact CG2-CD2 4.44Å; T40-L42 PolarHBondContact O-N 3.19Å; T40-L52 WeakPolarHBondContact O-CA 3.32Å; T40-D53 PolarHBondContact N-O 3.3Å; T40-D53 PolarHBondContact O-N 3.08Å
41L98.5Very high97.1Very high0 Ų052.9 Ų52.90%028%0.283CS..EExtended strand (participates in β ladder)trans-69.6116.3176.8174.661.3000110.4I19 C22 I23 G24 S25 L27 G43 I50I19-L41 HydrophobicContact CG2-CD2 3.88Å; I19-L41 WeakPolarHBondContact O-CD2 3.23Å; C22-L41 HydrophobicContact CB-CD2 3.86Å; I23-L41 HydrophobicContact CG1-CD2 3.96Å; I23-L41 HydrophobicContact CG1-CG 4.14Å; G24-L41 PolarHBondContact N-O 3.21Å; S25-L41 PolarHBondContact O-N 2.86Å; L27-L41 HydrophobicContact CB-CB 4.44Å; L27-L41 HydrophobicContact CD2-CB 4.39Å; L27-L41 HydrophobicContact CD2-CD2 4.29Å; L41-G43 WeakPolarHBondContact CD1-O 3.28Å; L41-I50 HydrophobicContact CD1-CG2 3.3Å
42L98.4Very high97.2Very high72 Ų7251.8 Ų51.838%0.37728%0.278SS..EExtended strand (participates in β ladder)trans-93.4-31.1174.3-60.1-169.8000112.7T40 V51 D53 Q72T40-L42 HydrophobicContact CG2-CD2 4.44Å; T40-L42 PolarHBondContact O-N 3.19Å; L42-V51 HydrophobicContact CB-CB 4.14Å; L42-V51 HydrophobicContact CB-CG1 3.99Å; L42-V51 HydrophobicContact CD1-CG1 4.01Å; L42-V51 HydrophobicContact CG-CG1 4.43Å; L42-V51 PolarHBondContact N-O 3.29Å; L42-D53 HydrophobicContact CD1-CB 3.82Å; L42-D53 HydrophobicContact CD2-CB 4Å; L42-D53 HydrophobicContact CG-CB 3.92Å; L42-Q72 VanDerWaalsContact CD1-NE2 3.29Å
43G98.2Very high97.3Very high17 Ų1747.8 Ų47.818%0.17526%0.263CS..EExtended strand (participates in β ladder)trans173.7170.4178.600000112.2L41 V51L41-G43 WeakPolarHBondContact CD1-O 3.28Å; G43-V51 PolarHBondContact O-N 2.88Å
44F98.2Very high97.4Very high55 Ų5549.8 Ų49.824%0.24126%0.255CS..EExtended strand (participates in β ladder)trans-150167.4178.368.5-76.2000111.1L16 I19 D20 I23 N49 I50L16-F44 HydrophobicContact CB-CE2 4.49Å; L16-F44 HydrophobicContact CD2-CE2 4.05Å; I19-F44 HydrophobicContact CB-CE1 4.24Å; I19-F44 HydrophobicContact CB-CZ 4.21Å; I19-F44 HydrophobicContact CG2-CD1 3.62Å; I19-F44 HydrophobicContact CG2-CD2 4.23Å; I19-F44 HydrophobicContact CG2-CE1 3.71Å; I19-F44 HydrophobicContact CG2-CE2 4.32Å; I19-F44 HydrophobicContact CG2-CG 3.91Å; I19-F44 HydrophobicContact CG2-CZ 4.06Å; D20-F44 HydrophobicContact CB-CE1 4.2Å; D20-F44 HydrophobicContact CB-CZ 4.24Å; I23-F44 HydrophobicContact CD1-CD1 4.49Å; I23-F44 HydrophobicContact CD1-CE1 4.19Å; F44-N49 CarbonylContact C-O 3.49Å; F44-N49 WeakPolarHBondContact CA-O 3.49Å; F44-N49 WeakPolarHBondContact CB-O 3.34Å; F44-I50 HydrophobicContact CB-CG1 4.14Å
45D96.9Very high97.6Very high61 Ų6146.5 Ų46.533%0.32624%0.238SC..  trans-114.2179.9173.372.76000112.6Y47 V48 N49D45-Y47 PolarHBondContact O-N 2.79Å; D45-Y47 VanDerWaalsContact O-N 3.12Å; D45-Y47 WeakPolarHBondContact OD1-CA 3.29Å; D45-Y47 WeakPolarHBondContact OD1-CB 3.49Å; D45-Y47 PolarHBondContact OD1-N 2.88Å; D45-V48 WeakPolarHBondContact O-CA 3.45Å; D45-V48 PolarHBondContact O-N 2.76Å; D45-V48 PolarHBondContact OD1-N 2.99Å; D45-N49 PolarHBondContact N-O 2.82Å; D45-N49 VanDerWaalsContact N-O 3.16Å; D45-N49 WeakPolarHBondContact OD1-CB 3.49Å; D45-N49 PolarHBondContact OD1-N 2.94Å; D45-N49 PolarHBondContact OD1-ND2 2.83Å; D45-N49 PolarHBondContact OD2-ND2 3.01Å
46D95Very high97.6Very high144 Ų14445.1 Ų45.177%0.7723%0.234SC*.THydrogen-bonded Turntrans-61.7-19.8180-66.6-28000114V48D46-V48 VanDerWaalsContact C-N 3.34Å
47Y94.8Very high97.6Very high188 Ų18844.6 Ų44.674%0.73723%0.232SC*.THydrogen-bonded Turntrans-92.42175.6-61.1-78.2000112.6D45 N49D45-Y47 PolarHBondContact O-N 2.79Å; D45-Y47 VanDerWaalsContact O-N 3.12Å; D45-Y47 WeakPolarHBondContact OD1-CA 3.29Å; D45-Y47 WeakPolarHBondContact OD1-CB 3.49Å; D45-Y47 PolarHBondContact OD1-N 2.88Å; Y47-N49 PolarHBondContact O-N 3.17Å
48V95.9Very high97.6Very high32 Ų3245.9 Ų45.919%0.19424%0.237CC..  trans60.234.6-175.3-160.60000111.1L16 I19 D45 D46 I50 G77 I80 L83L16-V48 HydrophobicContact CD2-CG2 4.28Å; I19-V48 HydrophobicContact CD1-CG1 4.32Å; D45-V48 WeakPolarHBondContact O-CA 3.45Å; D45-V48 PolarHBondContact O-N 2.76Å; D45-V48 PolarHBondContact OD1-N 2.99Å; D46-V48 VanDerWaalsContact C-N 3.34Å; V48-I50 HydrophobicContact CG1-CD1 3.99Å; V48-I50 HydrophobicContact CG1-CG1 4.17Å; V48-I50 WeakPolarHBondContact O-CG1 3.3Å; V48-G77 WeakPolarHBondContact O-CA 3.46Å; V48-I80 HydrophobicContact CG1-CD1 4.34Å; V48-L83 HydrophobicContact CG1-CD1 3.98Å
49N97.6Very high97.5Very high41 Ų4147.3 Ų47.322%0.21924%0.243CC..  trans-70.4133.1157.9-59.3-53.9000107.8F44 D45 Y47 L74 L75 N76 G77F44-N49 CarbonylContact C-O 3.49Å; F44-N49 WeakPolarHBondContact CA-O 3.49Å; F44-N49 WeakPolarHBondContact CB-O 3.34Å; D45-N49 PolarHBondContact N-O 2.82Å; D45-N49 VanDerWaalsContact N-O 3.16Å; D45-N49 WeakPolarHBondContact OD1-CB 3.49Å; D45-N49 PolarHBondContact OD1-N 2.94Å; D45-N49 PolarHBondContact OD1-ND2 2.83Å; D45-N49 PolarHBondContact OD2-ND2 3.01Å; Y47-N49 PolarHBondContact O-N 3.17Å; N49-L74 HydrophobicContact CB-CD1 4.35Å; N49-L75 CarbonylContact C-O 3.57Å; N49-L75 VanDerWaalsContact CA-O 3.25Å; N49-L75 WeakPolarHBondContact CA-O 3.44Å; N49-N76 WeakPolarHBondContact OD1-CA 3.4Å; N49-G77 PolarHBondContact OD1-N 2.97Å
50I98Very high97.3Very high0 Ų050.4 Ų50.40%027%0.265CS..EExtended strand (participates in β ladder)trans-122131.9-167.5-59.9-174000110.7L27 I29 L41 F44 V48 L52 L74 L75 I80 L83L27-I50 HydrophobicContact CD2-CD1 4.3Å; I29-I50 HydrophobicContact CD1-CD1 3.9Å; L41-I50 HydrophobicContact CD1-CG2 3.3Å; F44-I50 HydrophobicContact CB-CG1 4.14Å; V48-I50 HydrophobicContact CG1-CD1 3.99Å; V48-I50 HydrophobicContact CG1-CG1 4.17Å; V48-I50 WeakPolarHBondContact O-CG1 3.3Å; I50-L52 HydrophobicContact CG2-CD2 3.61Å; I50-L52 HydrophobicContact CG2-CG 3.76Å; I50-L74 CarbonylContact O-C 3.59Å; I50-L74 WeakPolarHBondContact O-CA 3.44Å; I50-L75 HydrophobicContact CB-CB 4.39Å; I50-L75 PolarHBondContact N-O 2.91Å; I50-L75 PolarHBondContact O-N 3.28Å; I50-I80 HydrophobicContact CD1-CD1 3.71Å; I50-I80 HydrophobicContact CG1-CD1 4.12Å; I50-L83 HydrophobicContact CD1-CD1 4.15Å; I50-L83 HydrophobicContact CD1-CD2 3.76Å
51V98.4Very high97.1Very high47 Ų4751.3 Ų51.329%0.28527%0.27SS..EExtended strand (participates in β ladder)trans-91.1121165.8-172.50000108.3L42 G43 Q72 I73 L74L42-V51 HydrophobicContact CB-CB 4.14Å; L42-V51 HydrophobicContact CB-CG1 3.99Å; L42-V51 HydrophobicContact CD1-CG1 4.01Å; L42-V51 HydrophobicContact CG-CG1 4.43Å; L42-V51 PolarHBondContact N-O 3.29Å; G43-V51 PolarHBondContact O-N 2.88Å; V51-Q72 HydrophobicContact CG1-CG 4.15Å; V51-I73 WeakPolarHBondContact CA-O 3.32Å; V51-L74 HydrophobicContact CG2-CD1 4Å
52L98.5Very high96.9Very high0 Ų057.4 Ų57.40%031%0.313CS..EExtended strand (participates in β ladder)trans-119.7148.5177.5-63.8173.3000110.8I29 T40 I50 V55 Q72 I73I29-L52 HydrophobicContact CD1-CD1 3.61Å; I29-L52 HydrophobicContact CD1-CD2 4.17Å; I29-L52 HydrophobicContact CD1-CG 4.32Å; T40-L52 WeakPolarHBondContact O-CA 3.32Å; I50-L52 HydrophobicContact CG2-CD2 3.61Å; I50-L52 HydrophobicContact CG2-CG 3.76Å; L52-V55 HydrophobicContact CB-CG2 3.4Å; L52-V55 HydrophobicContact CD1-CG1 4.49Å; L52-V55 HydrophobicContact CD1-CG2 4.29Å; L52-V55 HydrophobicContact CG-CG2 4.48Å; L52-Q72 VanDerWaalsContact O-CA 3.3Å; L52-Q72 WeakPolarHBondContact O-CA 3.34Å; L52-Q72 WeakPolarHBondContact O-CG 3.28Å; L52-I73 HydrophobicContact CB-CG1 4.11Å; L52-I73 HydrophobicContact CD1-CD1 4.34Å; L52-I73 PolarHBondContact N-O 2.98Å; L52-I73 PolarHBondContact O-N 3.2Å
53D98.4Very high96.6Very high51 Ų5163.1 Ų63.127%0.27334%0.337SS..EExtended strand (participates in β ladder)trans-119.1157.6172.7-144.422.5000111.3G39 T40 L42 V55 D71G39-D53 WeakPolarHBondContact CA-O 3.34Å; T40-D53 PolarHBondContact N-O 3.3Å; T40-D53 PolarHBondContact O-N 3.08Å; L42-D53 HydrophobicContact CD1-CB 3.82Å; L42-D53 HydrophobicContact CD2-CB 4Å; L42-D53 HydrophobicContact CG-CB 3.92Å; D53-V55 VanDerWaalsContact C-N 3.34Å; D53-V55 PolarHBondContact O-N 3.05Å; D53-D71 CarbonylContact C-O 3.54Å; D53-D71 WeakPolarHBondContact CA-O 3.42Å
54D97.8Very high96.3Very high121 Ų12164 Ų6465%0.64735%0.347SS*.EExtended strand (participates in β ladder)trans48.251.8179-70.1-43.1000112.9D71D54-D71 PolarHBondContact N-O 2.93Å
55V98Very high96Very high1 Ų165 Ų651%0.00635%0.351CS..EExtended strand (participates in β ladder)trans-85.1137.3-167.1-172.60000112.5L37 V38 L52 D53 K69 L70 I73L37-V55 HydrophobicContact CB-CG1 4.11Å; L37-V55 HydrophobicContact CD2-CG1 3.88Å; L37-V55 HydrophobicContact CG-CG1 4.49Å; V38-V55 CarbonylContact O-C 3.58Å; V38-V55 WeakPolarHBondContact O-CA 3.43Å; L52-V55 HydrophobicContact CB-CG2 3.4Å; L52-V55 HydrophobicContact CD1-CG1 4.49Å; L52-V55 HydrophobicContact CD1-CG2 4.29Å; L52-V55 HydrophobicContact CG-CG2 4.48Å; D53-V55 VanDerWaalsContact C-N 3.34Å; D53-V55 PolarHBondContact O-N 3.05Å; V55-K69 CarbonylContact O-C 3.47Å; V55-K69 WeakPolarHBondContact O-CA 3.43Å; V55-L70 HydrophobicContact CB-CB 4.25Å; V55-L70 PolarHBondContact N-O 2.89Å; V55-L70 PolarHBondContact O-N 2.77Å; V55-I73 HydrophobicContact CG1-CD1 4.07Å; V55-I73 HydrophobicContact CG2-CD1 4.25Å; V55-I73 HydrophobicContact CG2-CG1 4.08Å
56V97.8Very high95.9Very high31 Ų3169.4 Ų69.419%0.18836%0.363CS..EExtended strand (participates in β ladder)trans-113.1112.6165.9-173.90000108.5L37 V38 Y58 I67 T68 K69L37-V56 CarbonylContact C-O 3.59Å; L37-V56 WeakPolarHBondContact CA-O 3.32Å; V38-V56 PolarHBondContact N-O 3.3Å; V38-V56 PolarHBondContact O-N 2.77Å; V56-Y58 HydrophobicContact CB-CE2 4.29Å; V56-Y58 HydrophobicContact CG1-CD1 4.46Å; V56-Y58 HydrophobicContact CG1-CD2 4.46Å; V56-Y58 HydrophobicContact CG1-CE1 3.92Å; V56-Y58 HydrophobicContact CG1-CE2 3.86Å; V56-I67 HydrophobicContact CG1-CG2 3.53Å; V56-T68 WeakPolarHBondContact CA-O 3.45Å; V56-K69 HydrophobicContact CG2-CG 4.48Å
57E97.4Very high96Very high29 Ų2966.7 Ų66.714%0.13635%0.347CS..EExtended strand (participates in β ladder)trans-89.6128.8170.9-177.7-178.8111.700109.8K35 E36 L37 I67 T68 L70K35-E57 IonicContact NZ-OE1 3.55Å; K35-E57 PolarHBondContact NZ-OE1 3.43Å; K35-E57 IonicContact NZ-OE2 3.98Å; E36-E57 CarbonylContact O-C 3.46Å; E36-E57 WeakPolarHBondContact O-CA 3.32Å; L37-E57 HydrophobicContact CD2-CB 4.47Å; L37-E57 HydrophobicContact CG-CB 4.41Å; L37-E57 HydrophobicContact CG-CG 4.35Å; E57-I67 WeakPolarHBondContact O-CA 3.43Å; E57-T68 PolarHBondContact N-O 3.27Å; E57-T68 PolarHBondContact O-N 3.07Å; E57-L70 HydrophobicContact CB-CD1 4.4Å
58Y97.2Very high96.1Very high27 Ų2759.5 Ų59.511%0.10632%0.323CS..EExtended strand (participates in β ladder)trans-108.6123.6170.5-57.4-79000109.1K35 E36 V38 V56 K65 R66 I67 P90K35-Y58 CarbonylContact C-O 3.54Å; K35-Y58 VanDerWaalsContact CA-O 3.32Å; K35-Y58 WeakPolarHBondContact CA-O 3.46Å; E36-Y58 PolarHBondContact N-O 3.49Å; E36-Y58 PolarHBondContact O-N 3.36Å; V38-Y58 HydrophobicContact CB-CE2 4.43Å; V38-Y58 HydrophobicContact CG2-CE2 3.84Å; V56-Y58 HydrophobicContact CB-CE2 4.29Å; V56-Y58 HydrophobicContact CG1-CD1 4.46Å; V56-Y58 HydrophobicContact CG1-CD2 4.46Å; V56-Y58 HydrophobicContact CG1-CE1 3.92Å; V56-Y58 HydrophobicContact CG1-CE2 3.86Å; Y58-K65 HydrophobicContact CD1-CD 4.39Å; Y58-R66 WeakPolarHBondContact CA-O 3.5Å; Y58-I67 HydrophobicContact CD1-CD1 4.18Å; Y58-I67 HydrophobicContact CD1-CG1 3.92Å; Y58-I67 HydrophobicContact CD1-CG2 4.2Å; Y58-I67 HydrophobicContact CE1-CD1 4Å; Y58-I67 HydrophobicContact CE1-CG1 4.18Å; Y58-I67 HydrophobicContact CE1-CG2 4.05Å; Y58-P90 HydrophobicContact CD1-CG 4.49Å; Y58-P90 HydrophobicContact CD2-CG 4.18Å; Y58-P90 HydrophobicContact CG-CG 4.07Å
59E96.8Very high96.2Very high37 Ų3766.4 Ų66.417%0.17335%0.351CS..EExtended strand (participates in β ladder)trans-122.3121.5176.6-177176.4-151.400109.8N34 K35 T61 K65 R66N34-E59 WeakPolarHBondContact ND2-CG 3.43Å; N34-E59 WeakPolarHBondContact O-CA 3.32Å; K35-E59 VanDerWaalsContact CE-OE1 3.28Å; K35-E59 WeakPolarHBondContact CE-OE1 3.39Å; K35-E59 HydrophobicContact CG-CB 4.25Å; K35-E59 HydrophobicContact CG-CG 4.04Å; K35-E59 IonicContact NZ-OE1 2.7Å; E59-T61 HydrophobicContact CG-CG2 3.92Å; E59-T61 PolarHBondContact O-N 3.11Å; E59-K65 WeakPolarHBondContact O-CA 3.44Å; E59-R66 HydrophobicContact CB-CB 4.35Å; E59-R66 PolarHBondContact N-O 2.95Å; E59-R66 PolarHBondContact O-N 2.74Å
60S94Very high96.2Very high68 Ų6867.1 Ų67.148%0.47635%0.354SS..EExtended strand (participates in β ladder)trans-85.1107174.5-63.10000109.5N34N34-S60 WeakPolarHBondContact CB-O 3.3Å; N34-S60 PolarHBondContact ND2-O 3.11Å; N34-S60 PolarHBondContact O-N 3.18Å
61T93Very high96.2Very high55 Ų5573.8 Ų73.834%0.33739%0.39SS..EExtended strand (participates in β ladder)trans-106.2169177.776.30000110.7E59 E63 G64E59-T61 HydrophobicContact CG-CG2 3.92Å; E59-T61 PolarHBondContact O-N 3.11Å; T61-E63 PolarHBondContact O-N 2.9Å; T61-E63 PolarHBondContact OG1-N 3.36Å; T61-G64 WeakPolarHBondContact CA-O 3.46Å; T61-G64 PolarHBondContact N-O 2.7Å; T61-G64 PolarHBondContact O-N 2.9Å; T61-G64 VanDerWaalsContact O-N 3.15Å; T61-G64 PolarHBondContact OG1-N 2.97Å; T61-G64 PolarHBondContact OG1-O 3.41Å
62S93.7Very high96.2Very high129 Ų12977.4 Ų77.490%0.90240%0.404SS*.THydrogen-bonded Turntrans-62.6-21.1172.450.30000113.7
63E93.3Very high96.2Very high191 Ų19179.1 Ų79.189%0.89341%0.413SS*.THydrogen-bonded Turntrans-90-8.3178.6-62.1-179.7179.900112.7T61T61-E63 PolarHBondContact O-N 2.9Å; T61-E63 PolarHBondContact OG1-N 3.36Å
64G90.9Very high96.2Very high36 Ų3683.1 Ų83.137%0.37143%0.433SS..EExtended strand (participates in β ladder)trans127.5-166.8-176.400000112.7T61T61-G64 WeakPolarHBondContact CA-O 3.46Å; T61-G64 PolarHBondContact N-O 2.7Å; T61-G64 PolarHBondContact O-N 2.9Å; T61-G64 VanDerWaalsContact O-N 3.15Å; T61-G64 PolarHBondContact OG1-N 2.97Å; T61-G64 PolarHBondContact OG1-O 3.41Å
65K93Very high96.2Very high76 Ų7678.1 Ų78.133%0.3341%0.406SS..EExtended strand (participates in β ladder)trans-85.4123-178.3-164.1-177.7-173.8-1580110.3Y58 E59 E91Y58-K65 HydrophobicContact CD1-CD 4.39Å; E59-K65 WeakPolarHBondContact O-CA 3.44Å; K65-E91 WeakPolarHBondContact CD-OE1 3.38Å; K65-E91 VanDerWaalsContact NZ-CG 3.33Å; K65-E91 IonicContact NZ-OE1 2.76Å; K65-E91 PolarHBondContact NZ-OE1 3.12Å
66R95.3Very high96.1Very high153 Ų15382 Ų8258%0.57743%0.427SS*.EExtended strand (participates in β ladder)trans-98130.7171.4-177.2-179.8-179.8173.82.5109.1Y58 E59Y58-R66 WeakPolarHBondContact CA-O 3.5Å; E59-R66 HydrophobicContact CB-CB 4.35Å; E59-R66 PolarHBondContact N-O 2.95Å; E59-R66 PolarHBondContact O-N 2.74Å
67I96.4Very high96Very high87 Ų8781 Ų8145%0.44642%0.423SS..EExtended strand (participates in β ladder)trans-116124.2177.9-49.7-176000108.2V56 E57 Y58V56-I67 HydrophobicContact CG1-CG2 3.53Å; E57-I67 WeakPolarHBondContact O-CA 3.43Å; Y58-I67 HydrophobicContact CD1-CD1 4.18Å; Y58-I67 HydrophobicContact CD1-CG1 3.92Å; Y58-I67 HydrophobicContact CD1-CG2 4.2Å; Y58-I67 HydrophobicContact CE1-CD1 4Å; Y58-I67 HydrophobicContact CE1-CG1 4.18Å; Y58-I67 HydrophobicContact CE1-CG2 4.05Å
68T97.3Very high96Very high37 Ų3782.7 Ų82.723%0.22744%0.438CS..EExtended strand (participates in β ladder)trans-126.6129.6180-52.30000109.6V56 E57 L70V56-T68 WeakPolarHBondContact CA-O 3.45Å; E57-T68 PolarHBondContact N-O 3.27Å; E57-T68 PolarHBondContact O-N 3.07Å; T68-L70 HydrophobicContact CG2-CD2 3.91Å; T68-L70 HydrophobicContact CG2-CG 4.29Å
69K97.7Very high95.9Very high177 Ų17786.3 Ų86.377%0.7746%0.456SS*.EExtended strand (participates in β ladder)trans-90134.7169.4-67.3-170.1176.8-173.20109.8V55 V56V55-K69 CarbonylContact O-C 3.47Å; V55-K69 WeakPolarHBondContact O-CA 3.43Å; V56-K69 HydrophobicContact CG2-CG 4.48Å
70L97.9Very high95.9Very high57 Ų5785.8 Ų85.830%0.29845%0.454SS..EExtended strand (participates in β ladder)trans-130.6141.9177.2-54.7169.4000106.9V55 E57 T68 I73V55-L70 HydrophobicContact CB-CB 4.25Å; V55-L70 PolarHBondContact N-O 2.89Å; V55-L70 PolarHBondContact O-N 2.77Å; E57-L70 HydrophobicContact CB-CD1 4.4Å; T68-L70 HydrophobicContact CG2-CD2 3.91Å; T68-L70 HydrophobicContact CG2-CG 4.29Å; L70-I73 HydrophobicContact CB-CG2 3.84Å; L70-I73 HydrophobicContact CD1-CG2 3.97Å; L70-I73 HydrophobicContact CG-CG2 4.48Å
71D97.5Very high96.1Very high140 Ų14085.7 Ų85.775%0.74946%0.457SS*.EExtended strand (participates in β ladder)trans-72-88.2-179-61.1-28.5000109.7D53 D54D53-D71 CarbonylContact C-O 3.54Å; D53-D71 WeakPolarHBondContact CA-O 3.42Å; D54-D71 PolarHBondContact N-O 2.93Å
72Q98.2Very high96.3Very high123 Ų12388 Ų8858%0.57547%0.466SS*.EExtended strand (participates in β ladder)trans-114.2136.7175.2-174.9174.595.800110.4L42 V51 L52L42-Q72 VanDerWaalsContact CD1-NE2 3.29Å; V51-Q72 HydrophobicContact CG1-CG 4.15Å; L52-Q72 VanDerWaalsContact O-CA 3.3Å; L52-Q72 WeakPolarHBondContact O-CA 3.34Å; L52-Q72 WeakPolarHBondContact O-CG 3.28Å
73I98.5Very high96.4Very high36 Ų3683.7 Ų83.719%0.18543%0.432CS..EExtended strand (participates in β ladder)trans-133.4154.9176.670.2174.7000111.7L37 V51 L52 V55 L70L37-I73 HydrophobicContact CD2-CD1 3.53Å; V51-I73 WeakPolarHBondContact CA-O 3.32Å; L52-I73 HydrophobicContact CB-CG1 4.11Å; L52-I73 HydrophobicContact CD1-CD1 4.34Å; L52-I73 PolarHBondContact N-O 2.98Å; L52-I73 PolarHBondContact O-N 3.2Å; V55-I73 HydrophobicContact CG1-CD1 4.07Å; V55-I73 HydrophobicContact CG2-CD1 4.25Å; V55-I73 HydrophobicContact CG2-CG1 4.08Å; L70-I73 HydrophobicContact CB-CG2 3.84Å; L70-I73 HydrophobicContact CD1-CG2 3.97Å; L70-I73 HydrophobicContact CG-CG2 4.48Å
74L98.1Very high96.6Very high134 Ų13476.7 Ų76.770%0.70240%0.401SS*.EExtended strand (participates in β ladder)trans-102.1114.1160.117964.9000108.5N49 I50 V51N49-L74 HydrophobicContact CB-CD1 4.35Å; I50-L74 CarbonylContact O-C 3.59Å; I50-L74 WeakPolarHBondContact O-CA 3.44Å; V51-L74 HydrophobicContact CG2-CD1 4Å
75L97.8Very high96.8Very high16 Ų1678 Ų788%0.08440%0.403CS..EExtended strand (participates in β ladder)trans-92.9131.5178.3-173.766.3000110.7I29 M31 L37 N49 I50 I80I29-L75 HydrophobicContact CD1-CD2 3.66Å; I29-L75 HydrophobicContact CG2-CD2 3.88Å; M31-L75 HydrophobicContact CE-CD1 3.71Å; M31-L75 HydrophobicContact CE-CG 4.47Å; M31-L75 HydrophobicContact SD-CD1 3.91Å; L37-L75 HydrophobicContact CD1-CD1 4.33Å; L37-L75 HydrophobicContact CD1-CD2 4.35Å; L37-L75 HydrophobicContact CD2-CD1 4.34Å; N49-L75 CarbonylContact C-O 3.57Å; N49-L75 VanDerWaalsContact CA-O 3.25Å; N49-L75 WeakPolarHBondContact CA-O 3.44Å; I50-L75 HydrophobicContact CB-CB 4.39Å; I50-L75 PolarHBondContact N-O 2.91Å; I50-L75 PolarHBondContact O-N 3.28Å; L75-I80 HydrophobicContact CD2-CD1 3.93Å; L75-I80 HydrophobicContact CD2-CG1 4.13Å; L75-I80 HydrophobicContact CG-CD1 4.46Å
76N96.4Very high96.9Very high83 Ų8377 Ų7744%0.44441%0.413SS..  trans-75.8122.9175.9-177.6-32.5000111.3N49 S78N49-N76 WeakPolarHBondContact OD1-CA 3.4Å; N76-S78 VanDerWaalsContact C-N 3.32Å; N76-S78 PolarHBondContact O-N 3.44Å; N76-S78 VanDerWaalsContact OD1-CB 3.29Å; N76-S78 WeakPolarHBondContact OD1-CB 3.29Å; N76-S78 PolarHBondContact OD1-N 2.9Å; N76-S78 PolarHBondContact OD1-OG 2.63Å
77G96.7Very high96.8Very high11 Ų1170.1 Ų70.111%0.11339%0.39CS..G310 helixtrans-67.1-23.8-176.500000115.6V48 N49 H79 I80V48-G77 WeakPolarHBondContact O-CA 3.46Å; N49-G77 PolarHBondContact OD1-N 2.97Å; G77-H79 PolarHBondContact O-N 3.26Å; G77-H79 VanDerWaalsContact O-N 3.11Å; G77-I80 PolarHBondContact O-N 3.34Å; G77-I80 VanDerWaalsContact O-N 3.07Å
78S96.6Very high96.6Very high64 Ų6471.9 Ų71.945%0.44840%0.396SS..G310 helixtrans-62.2-24.6-175.9640000114.3K32 N76K32-S78 PolarHBondContact NZ-O 3.11Å; N76-S78 VanDerWaalsContact C-N 3.32Å; N76-S78 PolarHBondContact O-N 3.44Å; N76-S78 VanDerWaalsContact OD1-CB 3.29Å; N76-S78 WeakPolarHBondContact OD1-CB 3.29Å; N76-S78 PolarHBondContact OD1-N 2.9Å; N76-S78 PolarHBondContact OD1-OG 2.63Å
79H95.1Very high96.3Very high102 Ų10270.2 Ų70.247%0.47239%0.387SS..G310 helixtrans-102.82.5-180-61.8139.1000113.5M31 K32 G77M31-H79 CarbonylContact C-O 3.59Å; M31-H79 VanDerWaalsContact CA-O 3.3Å; M31-H79 WeakPolarHBondContact CA-O 3.01Å; M31-H79 HydrophobicContact CE-CB 3.56Å; K32-H79 PolarHBondContact N-O 2.91Å; G77-H79 PolarHBondContact O-N 3.26Å; G77-H79 VanDerWaalsContact O-N 3.11Å
80I97.2Very high95.9Very high26 Ų2664.4 Ų64.413%0.13337%0.367CS..EExtended strand (participates in β ladder)trans-74.3134.3175.3-62.7179.7000109.3I29 V48 I50 L75 G77 L83I29-I80 HydrophobicContact CG2-CD1 4.25Å; I29-I80 HydrophobicContact CG2-CG1 4.04Å; I29-I80 HydrophobicContact CG2-CG2 4.04Å; V48-I80 HydrophobicContact CG1-CD1 4.34Å; I50-I80 HydrophobicContact CD1-CD1 3.71Å; I50-I80 HydrophobicContact CG1-CD1 4.12Å; L75-I80 HydrophobicContact CD2-CD1 3.93Å; L75-I80 HydrophobicContact CD2-CG1 4.13Å; L75-I80 HydrophobicContact CG-CD1 4.46Å; G77-I80 PolarHBondContact O-N 3.34Å; G77-I80 VanDerWaalsContact O-N 3.07Å; I80-L83 HydrophobicContact CD1-CD2 4.35Å; I80-L83 HydrophobicContact CG2-CD2 3.77Å; I80-L83 HydrophobicContact CG2-CG 4.03Å
81A97.3Very high95Very high66 Ų6666.9 Ų66.955%0.54538%0.378SS..EExtended strand (participates in β ladder)trans-106.5-40175.200000111.9I30 K32I30-A81 WeakPolarHBondContact O-CA 3.41Å; I30-A81 WeakPolarHBondContact O-CB 3.48Å; I30-A81 PolarHBondContact O-N 3.37Å; K32-A81 HydrophobicContact CG-CB 4.32Å
82M96.7Very high93Very high105 Ų10570.4 Ų70.452%0.51740%0.395SS..EExtended strand (participates in β ladder)trans-149.2148.6-180-168.4-179-64.100111.4I29 I30 I84I29-M82 WeakPolarHBondContact CA-O 3.48Å; I30-M82 HydrophobicContact CB-CB 4.14Å; I30-M82 HydrophobicContact CD1-CB 4.32Å; I30-M82 HydrophobicContact CD1-SD 4.25Å; I30-M82 HydrophobicContact CG1-CB 4.47Å; I30-M82 PolarHBondContact N-O 3.4Å; I30-M82 PolarHBondContact O-N 2.92Å; I30-M82 VanDerWaalsContact O-N 3.17Å; M82-I84 HydrophobicContact CG-CG1 3.95Å; M82-I84 HydrophobicContact SD-CD1 3.84Å; M82-I84 HydrophobicContact SD-CG1 3.74Å
83L97Very high92.8Very high38 Ų3867.8 Ų67.820%0.19939%0.386CS..EExtended strand (participates in β ladder)trans-120.9125.9170.8-60.5175.3000108.5I19 L27 I29 V48 I50 I80I19-L83 HydrophobicContact CD1-CD1 3.46Å; I19-L83 VanDerWaalsContact CD1-CD1 3.46Å; I19-L83 HydrophobicContact CG1-CD1 3.8Å; L27-L83 HydrophobicContact CD1-CB 4.28Å; L27-L83 HydrophobicContact CD2-CD2 3.9Å; L27-L83 HydrophobicContact CG-CD2 4.44Å; I29-L83 HydrophobicContact CB-CD2 4.14Å; I29-L83 HydrophobicContact CD1-CD2 3.91Å; I29-L83 HydrophobicContact CG1-CD2 3.6Å; I29-L83 HydrophobicContact CG2-CD2 3.86Å; V48-L83 HydrophobicContact CG1-CD1 3.98Å; I50-L83 HydrophobicContact CD1-CD1 4.15Å; I50-L83 HydrophobicContact CD1-CD2 3.76Å; I80-L83 HydrophobicContact CD1-CD2 4.35Å; I80-L83 HydrophobicContact CG2-CD2 3.77Å; I80-L83 HydrophobicContact CG2-CG 4.03Å
84I96.9Very high92.5Very high44 Ų4469.4 Ų69.423%0.22640%0.397CS..EExtended strand (participates in β ladder)trans-120.2101.2-175.5-55.4169.9000108.2W28 I30 M82 G86 G87W28-I84 HydrophobicContact CB-CB 4.16Å; W28-I84 HydrophobicContact CD2-CD1 3.83Å; W28-I84 HydrophobicContact CE3-CB 4.37Å; W28-I84 HydrophobicContact CE3-CD1 3.53Å; W28-I84 HydrophobicContact CE3-CG2 4.29Å; W28-I84 HydrophobicContact CG-CD1 4.39Å; W28-I84 HydrophobicContact CZ3-CD1 3.92Å; W28-I84 PolarHBondContact N-O 2.79Å; W28-I84 PolarHBondContact O-N 2.83Å; I30-I84 HydrophobicContact CD1-CD1 3.82Å; I30-I84 HydrophobicContact CG1-CD1 4.32Å; M82-I84 HydrophobicContact CG-CG1 3.95Å; M82-I84 HydrophobicContact SD-CD1 3.84Å; M82-I84 HydrophobicContact SD-CG1 3.74Å; I84-G86 PolarHBondContact O-N 3.37Å; I84-G87 PolarHBondContact O-N 3.02Å
85P96.1Very high92.2Very high64 Ų6465.8 Ų65.842%0.41638%0.38SS..EExtended strand (participates in β ladder)trans-58.3129.6176-25.836.1000111.9L18 C22 L27 G87L18-P85 HydrophobicContact CD1-CG 4.36Å; L18-P85 HydrophobicContact CG-CG 4.49Å; C22-P85 VanDerWaalsContact SG-CB 3.56Å; C22-P85 WeakPolarHBondContact SG-CG 3.25Å; L27-P85 HydrophobicContact CD1-CG 4.47Å; P85-G87 PolarHBondContact O-N 2.9Å
86G94.6Very high91.9Very high54 Ų5468.8 Ų68.856%0.55740%0.397SS*.THydrogen-bonded Turntrans70.66.6179.200000115.3K26 I84K26-G86 WeakPolarHBondContact O-CA 3.12Å; K26-G86 PolarHBondContact O-N 3.16Å; I84-G86 PolarHBondContact O-N 3.37Å
87G92.9Very high91.6Very high9 Ų967.9 Ų67.99%0.09339%0.394CS..  trans-66.2144.9178.100000112.7I84 P85I84-G87 PolarHBondContact O-N 3.02Å; P85-G87 PolarHBondContact O-N 2.9Å
88E92.1Very high91.2Very high123 Ų12371.7 Ų71.758%0.57541%0.413SS*.  trans-101.8-4.5-176.3-59.7-170.6151.700113.3L92E88-L92 HydrophobicContact CB-CD2 4.3Å; E88-L92 WeakPolarHBondContact OE2-CD2 3.48Å
89G90.8Very high90.8Very high3 Ų372.2 Ų72.23%0.03141%0.41CS..  trans101.5-175.6-176.500000112.6V38 E91V38-G89 VanDerWaalsContact CG2-CA 3.49Å; G89-E91 PolarHBondContact O-N 2.95Å
90P90Very high90.5Very high55 Ų5569.9 Ų69.936%0.35741%0.406SS..SBendtrans-78-1.2-174.327.9-32.1000114.4W28 E36 Y58W28-P90 HydrophobicContact CZ2-CB 4.12Å; E36-P90 WeakPolarHBondContact OE2-CD 3.46Å; E36-P90 WeakPolarHBondContact OE2-CG 3.43Å; Y58-P90 HydrophobicContact CD1-CG 4.49Å; Y58-P90 HydrophobicContact CD2-CG 4.18Å; Y58-P90 HydrophobicContact CG-CG 4.07Å
91E78.9Confident90Very high109 Ų10973.6 Ų73.651%0.50943%0.428SS..  trans-108101.4172.5-80.2168.9-151.900108.6K65 G89K65-E91 WeakPolarHBondContact CD-OE1 3.38Å; K65-E91 VanDerWaalsContact NZ-CG 3.33Å; K65-E91 IonicContact NZ-OE1 2.76Å; K65-E91 PolarHBondContact NZ-OE1 3.12Å; G89-E91 PolarHBondContact O-N 2.95Å
92L56.2Low89.3Confident213 Ų21374.3 Ų74.3100%1.11542%0.418SS*.  trans-100.40159.3-72.4175.4000109.1E88E88-L92 HydrophobicContact CB-CD2 4.3Å; E88-L92 WeakPolarHBondContact OE2-CD2 3.48Å

Retrieved 92 of 92 residues in 41.4 ms (Link to these results)