A0A077ZEP3_TRITR Loading...

Putative mitochondrial ribosomal protein, L17

AlphaFold DB , UniProt , Accession A0A077ZEP3, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 78 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M38.9Very low41.9Very low241 Ų241140.7 Ų140.7100%1.18777%0.772SS**  093.90-155.7162.1-166.900105.1A3M1-A3 PolarHBondContact O-N 2.72Å
2E38.9Very low41.8Very low180 Ų180143.9 Ų143.984%0.84178%0.777SS**  trans-77.5107-174.3-66.9-180117.700108.1F4E2-F4 PolarHBondContact O-N 3.28Å
3A40.8Very low42Very low80 Ų80140.5 Ų140.566%0.66177%0.771SS**  trans-79.1102.8172.800000107.5M1 N5M1-A3 PolarHBondContact O-N 2.72Å; A3-N5 PolarHBondContact O-N 3.28Å
4F41Very low41.8Very low182 Ų182135.9 Ų135.980%0.79877%0.772SS**  trans-63.778.8164.7-80.6-98.9000108.8E2 D6E2-F4 PolarHBondContact O-N 3.28Å; F4-D6 PolarHBondContact O-N 2.83Å; F4-D6 VanDerWaalsContact O-N 3.11Å
5N43.8Very low41.4Very low144 Ų144138.7 Ų138.777%0.7778%0.776SS**  trans-82.563.8162.1-72.4-19.8000107.5A3 E7A3-N5 PolarHBondContact O-N 3.28Å; N5-E7 PolarHBondContact O-N 3.11Å
6D42.2Very low41.3Very low131 Ų131139.8 Ų139.870%0.70178%0.778SS**  trans-76.374.3158.3-135.3-74.9000105.2F4 S8F4-D6 PolarHBondContact O-N 2.83Å; F4-D6 VanDerWaalsContact O-N 3.11Å; D6-S8 PolarHBondContact O-N 2.76Å
7E40.3Very low41.3Very low170 Ų170137.9 Ų137.979%0.79476%0.757SS**  trans-66.779.9169.3-166.5173.5102.900105.4N5 T9N5-E7 PolarHBondContact O-N 3.11Å; E7-T9 PolarHBondContact O-N 2.97Å
8S43.5Very low41.3Very low93 Ų93137.9 Ų137.965%0.6576%0.756SS**  trans-60.691.9169.6-63.70000105.9D6 P10D6-S8 PolarHBondContact O-N 2.76Å; S8-P10 VanDerWaalsContact O-CD 3.26Å; S8-P10 WeakPolarHBondContact O-CD 3.36Å
9T40.8Very low41.6Very low101 Ų101136.2 Ų136.262%0.6275%0.753SS**  trans-48.6111.7176.6-38.10000106.6E7E7-T9 PolarHBondContact O-N 2.97Å
10P47.1Very low42Very low97 Ų97131.4 Ų131.463%0.6374%0.736SS**  trans-57.9136.6177.722.8-31.1000106.7S8 Q12S8-P10 VanDerWaalsContact O-CD 3.26Å; S8-P10 WeakPolarHBondContact O-CD 3.36Å; P10-Q12 PolarHBondContact O-N 3.23Å
11P43.3Very low42.2Very low129 Ų129134.5 Ų134.584%0.83874%0.744SS**  trans-52.1104.7-176.817.3-29.3000109.4S13P11-S13 VanDerWaalsContact C-N 3.25Å; P11-S13 PolarHBondContact O-N 2.78Å
12Q41.2Very low42.6Very low179 Ų179128 Ų12884%0.83671%0.714SS**SBendtrans-77.680.2178.5-103.2-172.7-9.600107.6P10P10-Q12 PolarHBondContact O-N 3.23Å
13S43.5Very low43.2Very low99 Ų99126.1 Ų126.169%0.69272%0.715SS**  trans162.878.9151.2600000106.8P11 E15P11-S13 VanDerWaalsContact C-N 3.25Å; P11-S13 PolarHBondContact O-N 2.78Å; S13-E15 VanDerWaalsContact C-N 3.25Å; S13-E15 PolarHBondContact O-N 2.93Å
14G40.4Very low43.8Very low76 Ų76126.6 Ų126.678%0.78470%0.703SS**  trans-63101.6154.200000105.6L16G14-L16 PolarHBondContact O-N 3.17Å; G14-L16 VanDerWaalsContact O-N 3.15Å
15E35.5Very low44.6Very low178 Ų178126.5 Ų126.583%0.83271%0.711SS**  trans-53.7124.7170.5-73.2-173107.200107.1S13 Y17S13-E15 VanDerWaalsContact C-N 3.25Å; S13-E15 PolarHBondContact O-N 2.93Å; E15-Y17 PolarHBondContact O-N 3.17Å
16L39Very low45.6Very low156 Ų156121.4 Ų121.482%0.81769%0.689SS**  trans-60.2104.3171.3-91.8143.1000106.6G14 N18G14-L16 PolarHBondContact O-N 3.17Å; G14-L16 VanDerWaalsContact O-N 3.15Å; L16-N18 PolarHBondContact O-N 3.15Å
17Y41.7Very low46.6Very low108 Ų108122.4 Ų122.442%0.42469%0.686SS.*  trans-60.7110.3168.5176.8-120.4000107.3E15 P19 L73E15-Y17 PolarHBondContact O-N 3.17Å; Y17-P19 HydrophobicContact CD1-CB 4.35Å; Y17-P19 HydrophobicContact CE1-CB 3.94Å; Y17-P19 WeakPolarHBondContact O-CD 3.26Å; Y17-L73 HydrophobicContact CD2-CD2 3.09Å; Y17-L73 HydrophobicContact CE2-CD2 3.03Å; Y17-L73 HydrophobicContact CG-CD2 4.21Å
18N41.7Very low47.9Very low138 Ų138117.5 Ų117.574%0.73867%0.668SS**  trans-79.7105167.6-66.3-59.4000105.7L16 G20L16-N18 PolarHBondContact O-N 3.15Å; N18-G20 PolarHBondContact O-N 2.76Å
19P46.8Very low49.3Very low106 Ų106117.1 Ų117.169%0.68866%0.658SS**  trans-59.9111.4-179.825.2-32.6000108.3Y17Y17-P19 HydrophobicContact CD1-CB 4.35Å; Y17-P19 HydrophobicContact CE1-CB 3.94Å; Y17-P19 WeakPolarHBondContact O-CD 3.26Å
20G48.7Very low50.7Low40 Ų40118.4 Ų118.441%0.41265%0.652SS.*  trans-58.5157.7155.200000108.6N18 D22N18-G20 PolarHBondContact O-N 2.76Å; G20-D22 PolarHBondContact O-N 3.38Å
21E47.6Very low51.9Low197 Ų197117.6 Ų117.692%0.92165%0.645SS**SBendtrans-67.234.8171.5-70.4-179.288.500112.4T23E21-T23 VanDerWaalsContact C-N 3.35Å; E21-T23 PolarHBondContact O-N 2.8Å
22D47.9Very low53.3Low103 Ų103116.7 Ų116.755%0.55163%0.625SS**  trans-76.493174.1-69.6-42.1000107.9G20G20-D22 PolarHBondContact O-N 3.38Å
23T50.3Low54.7Low141 Ų141115.3 Ų115.387%0.86561%0.612SS**  trans-83.7126.7167.455.60000108.2E21E21-T23 VanDerWaalsContact C-N 3.35Å; E21-T23 PolarHBondContact O-N 2.8Å
24F54.3Low56.1Low90 Ų90116 Ų11640%0.39560%0.6SS.*  trans-125.2138.317455.5-86.1000109A26 L46 F72F24-A26 HydrophobicContact CD2-CB 3.81Å; F24-A26 HydrophobicContact CE2-CB 3.7Å; F24-A26 PolarHBondContact O-N 3.45Å; F24-A26 VanDerWaalsContact O-N 3.13Å; F24-L46 HydrophobicContact CD2-CD2 4.27Å; F24-L46 HydrophobicContact CE2-CD2 3.47Å; F24-L46 VanDerWaalsContact CE2-CD2 3.47Å; F24-L46 HydrophobicContact CZ-CD2 4.25Å; F24-F72 HydrophobicContact CD1-CZ 4.08Å; F24-F72 HydrophobicContact CE1-CE1 4.33Å; F24-F72 HydrophobicContact CE1-CE2 4.36Å; F24-F72 AromaticContact CE1-CZ 3.5Å; F24-F72 HydrophobicContact CE1-CZ 3.5Å; F24-F72 VanDerWaalsContact CE1-CZ 3.5Å; F24-F72 HydrophobicContact CE2-CZ 4.45Å; F24-F72 HydrophobicContact CZ-CE2 4.36Å; F24-F72 AromaticContact CZ-CZ 3.71Å; F24-F72 HydrophobicContact CZ-CZ 3.71Å
25D56.4Low57.6Low181 Ų181119 Ų11997%0.96860%0.597SS**  trans-70.5109.8175.2-78.6-41.9000109.2
26A65.1Low59.6Low37 Ų37117.4 Ų117.431%0.30659%0.593SS.*  trans-120135.3179.200000110.4F24 V28 V44 L46F24-A26 HydrophobicContact CD2-CB 3.81Å; F24-A26 HydrophobicContact CE2-CB 3.7Å; F24-A26 PolarHBondContact O-N 3.45Å; F24-A26 VanDerWaalsContact O-N 3.13Å; A26-V28 PolarHBondContact O-N 3Å; A26-V44 HydrophobicContact CB-CG1 3.29Å; A26-L46 HydrophobicContact CB-CD2 4.05Å
27K62.8Low61.4Low151 Ų151112 Ų11266%0.65757%0.565SS**EExtended strand (participates in β ladder)trans-84.4110.4179.7-172.1175.2-178.4176.70109.6L29 N45K27-L29 PolarHBondContact O-N 2.78Å; K27-L29 VanDerWaalsContact O-N 3.16Å; K27-N45 PolarHBondContact N-O 3.13Å; K27-N45 PolarHBondContact O-N 3.46Å
28V67.9Low62.9Low67 Ų67111.3 Ų111.341%0.40657%0.569SS.*EExtended strand (participates in β ladder)trans-64.4115.7166.9-175.20000108.4A26 V31 F42 V44A26-V28 PolarHBondContact O-N 3Å; V28-V31 HydrophobicContact CG1-CG2 3.54Å; V28-F42 HydrophobicContact CG1-CD1 4.21Å; V28-V44 HydrophobicContact CG2-CG2 4.25Å
29L72.9Confident64.1Low86 Ų86105.1 Ų105.145%0.4554%0.536SS..EExtended strand (participates in β ladder)trans-81.1-40176.6-63.2-178.5000111.1K27 E43 N45 I51K27-L29 PolarHBondContact O-N 2.78Å; K27-L29 VanDerWaalsContact O-N 3.16Å; L29-E43 PolarHBondContact N-O 3.1Å; L29-N45 HydrophobicContact CD1-CB 3.8Å; L29-N45 HydrophobicContact CD2-CB 3.8Å; L29-N45 HydrophobicContact CG-CB 3.68Å; L29-I51 HydrophobicContact CD1-CG1 4.5Å
30R70.8Confident65Low128 Ų128103.2 Ų103.248%0.48352%0.519SS..EExtended strand (participates in β ladder)trans-152.9141.1-175.8-168.9171.2179.1169.2-0.4110.8R32 E43R30-R32 VanDerWaalsContact CD-NE 3.34Å; R30-R32 HydrophobicContact CG-CG 3.99Å; R30-R32 VanDerWaalsContact CZ-NE 3.3Å; R30-E43 HydrophobicContact CB-CB 4.11Å; R30-E43 PolarHBondContact N-O 3.48Å; R30-E43 PolarHBondContact O-N 2.83Å
31V71.9Confident66Low80 Ų80101.5 Ų101.549%0.48550%0.501SS..EExtended strand (participates in β ladder)trans-115.8132.3168.7-172.80000107.7V28 I40 V41 F42V28-V31 HydrophobicContact CG1-CG2 3.54Å; V31-I40 HydrophobicContact CG1-CG2 3.44Å; V31-I40 VanDerWaalsContact CG1-CG2 3.44Å; V31-V41 CarbonylContact C-O 3.54Å; V31-V41 WeakPolarHBondContact CA-O 3.34Å; V31-F42 HydrophobicContact CG1-CD1 4.17Å; V31-F42 HydrophobicContact CG1-CE1 4Å; V31-F42 HydrophobicContact CG1-CZ 4.48Å; V31-F42 HydrophobicContact CG2-CD1 3.73Å; V31-F42 HydrophobicContact CG2-CE1 3.99Å
32R72.5Confident67Low109 Ų10994.9 Ų94.941%0.41147%0.469SS..EExtended strand (participates in β ladder)trans-131.6128.8174.6-52-171.4-156.7-157.52.8109.2R30 V41 E43R30-R32 VanDerWaalsContact CD-NE 3.34Å; R30-R32 HydrophobicContact CG-CG 3.99Å; R30-R32 VanDerWaalsContact CZ-NE 3.3Å; R32-V41 HydrophobicContact CB-CB 4.44Å; R32-V41 PolarHBondContact N-O 2.84Å; R32-V41 WeakPolarHBondContact O-CA 3.44Å; R32-V41 WeakPolarHBondContact O-CB 3.29Å; R32-V41 PolarHBondContact O-N 3.15Å; R32-E43 IonicContact CZ-OE1 2.76Å; R32-E43 VanDerWaalsContact CZ-OE1 3.23Å; R32-E43 IonicContact NE-OE1 3.7Å; R32-E43 PolarHBondContact NE-OE1 2.83Å; R32-E43 IonicContact NH2-OE1 3.87Å; R32-E43 PolarHBondContact NH2-OE1 3.43Å; R32-E43 IonicContact NH2-OE2 2.72Å
33W70.6Confident68Low151 Ų15192.1 Ų92.157%0.57245%0.453SS*.EExtended strand (participates in β ladder)trans-86.1133.8166.5-176.450.1000109.4L35 D38 T39W33-L35 HydrophobicContact CD2-CG 4.5Å; W33-L35 HydrophobicContact CE3-CD2 4.09Å; W33-L35 HydrophobicContact CE3-CG 3.99Å; W33-L35 HydrophobicContact CH2-CD2 3.35Å; W33-L35 HydrophobicContact CH2-CG 4.12Å; W33-L35 HydrophobicContact CZ2-CD2 4.04Å; W33-L35 HydrophobicContact CZ3-CD2 3.38Å; W33-L35 HydrophobicContact CZ3-CG 3.8Å; W33-D38 WeakPolarHBondContact CZ2-OD1 3.1Å; W33-D38 PolarHBondContact NE1-OD1 2.98Å; W33-T39 VanDerWaalsContact CD1-O 3.25Å
34R72.6Confident68.9Low114 Ų11486 Ų8643%0.4342%0.415SS..EExtended strand (participates in β ladder)trans-109.4101.5177.7-172.3176.9-175.4-153.67.8108.6L36 D37 D38 T39R34-L36 HydrophobicContact CG-CB 4.26Å; R34-L36 PolarHBondContact O-N 3.44Å; R34-L36 VanDerWaalsContact O-N 3.16Å; R34-D37 WeakPolarHBondContact CB-OD1 3.16Å; R34-D37 WeakPolarHBondContact CD-OD1 3.22Å; R34-D37 WeakPolarHBondContact CD-OD2 3.06Å; R34-D37 WeakPolarHBondContact CG-OD1 3.48Å; R34-D37 IonicContact CZ-OD2 2.76Å; R34-D37 IonicContact NE-OD2 3.01Å; R34-D37 IonicContact NH1-OD2 3.23Å; R34-D37 PolarHBondContact NH1-OD2 3.29Å; R34-D37 PolarHBondContact O-N 2.87Å; R34-D37 VanDerWaalsContact O-OD1 3.12Å; R34-D38 WeakPolarHBondContact O-CA 3.27Å; R34-D38 PolarHBondContact O-N 2.96Å; R34-T39 PolarHBondContact N-O 2.83Å; R34-T39 PolarHBondContact O-N 2.9Å
35L72.4Confident69.6Low138 Ų13884.6 Ų84.672%0.72341%0.412SS*.THydrogen-bonded Turntrans-54.2-33.1179-81.7152000113.6W33 D37W33-L35 HydrophobicContact CD2-CG 4.5Å; W33-L35 HydrophobicContact CE3-CD2 4.09Å; W33-L35 HydrophobicContact CE3-CG 3.99Å; W33-L35 HydrophobicContact CH2-CD2 3.35Å; W33-L35 HydrophobicContact CH2-CG 4.12Å; W33-L35 HydrophobicContact CZ2-CD2 4.04Å; W33-L35 HydrophobicContact CZ3-CD2 3.38Å; W33-L35 HydrophobicContact CZ3-CG 3.8Å; L35-D37 VanDerWaalsContact C-N 3.27Å; L35-D37 PolarHBondContact O-N 3.01Å
36L78.2Confident70Confident144 Ų14478.3 Ų78.375%0.75438%0.378SS*.THydrogen-bonded Turntrans-60.4-36.6-174.9-175.867.4000113R34R34-L36 HydrophobicContact CG-CB 4.26Å; R34-L36 PolarHBondContact O-N 3.44Å; R34-L36 VanDerWaalsContact O-N 3.16Å
37D77.4Confident70Confident43 Ų4378 Ų7823%0.2338%0.379CS..THydrogen-bonded Turntrans-126.69.7-174.951.218.1000112.3R34 L35 T39 R57R34-D37 WeakPolarHBondContact CB-OD1 3.16Å; R34-D37 WeakPolarHBondContact CD-OD1 3.22Å; R34-D37 WeakPolarHBondContact CD-OD2 3.06Å; R34-D37 WeakPolarHBondContact CG-OD1 3.48Å; R34-D37 IonicContact CZ-OD2 2.76Å; R34-D37 IonicContact NE-OD2 3.01Å; R34-D37 IonicContact NH1-OD2 3.23Å; R34-D37 PolarHBondContact NH1-OD2 3.29Å; R34-D37 PolarHBondContact O-N 2.87Å; R34-D37 VanDerWaalsContact O-OD1 3.12Å; L35-D37 VanDerWaalsContact C-N 3.27Å; L35-D37 PolarHBondContact O-N 3.01Å; D37-T39 HydrophobicContact CB-CG2 3.99Å; D37-T39 VanDerWaalsContact CG-OG1 3.31Å; D37-T39 WeakPolarHBondContact O-CG2 3.13Å; D37-T39 PolarHBondContact O-N 2.91Å; D37-T39 WeakPolarHBondContact OD1-CB 3.4Å; D37-T39 WeakPolarHBondContact OD1-CG2 3.42Å; D37-T39 PolarHBondContact OD1-N 3.15Å; D37-T39 PolarHBondContact OD1-OG1 2.95Å; D37-R57 PolarHBondContact O-NE 2.95Å; D37-R57 PolarHBondContact O-NH2 3.01Å
38D71.7Confident69.9Low93 Ų9379.8 Ų79.850%0.49739%0.387SS..THydrogen-bonded Turntrans46.550-174.8-166.229.2000112.1W33 R34W33-D38 WeakPolarHBondContact CZ2-OD1 3.1Å; W33-D38 PolarHBondContact NE1-OD1 2.98Å; R34-D38 WeakPolarHBondContact O-CA 3.27Å; R34-D38 PolarHBondContact O-N 2.96Å
39T67Low69.3Low9 Ų984.4 Ų84.46%0.05541%0.409CS..EExtended strand (participates in β ladder)trans-114.6144179.5640000111.1W33 R34 D37 V55 R57W33-T39 VanDerWaalsContact CD1-O 3.25Å; R34-T39 PolarHBondContact N-O 2.83Å; R34-T39 PolarHBondContact O-N 2.9Å; D37-T39 HydrophobicContact CB-CG2 3.99Å; D37-T39 VanDerWaalsContact CG-OG1 3.31Å; D37-T39 WeakPolarHBondContact O-CG2 3.13Å; D37-T39 PolarHBondContact O-N 2.91Å; D37-T39 WeakPolarHBondContact OD1-CB 3.4Å; D37-T39 WeakPolarHBondContact OD1-CG2 3.42Å; D37-T39 PolarHBondContact OD1-N 3.15Å; D37-T39 PolarHBondContact OD1-OG1 2.95Å; T39-V55 VanDerWaalsContact CB-CG1 3.48Å; T39-V55 HydrophobicContact CG2-CG1 3.57Å; T39-R57 HydrophobicContact CG2-CG 4.12Å
40I66.7Low68.5Low66 Ų6683.5 Ų83.534%0.33840%0.4SS..EExtended strand (participates in β ladder)trans-98.1122.3168.7-50.4174.4000108.1V31 F42 V55 T56V31-I40 HydrophobicContact CG1-CG2 3.44Å; V31-I40 VanDerWaalsContact CG1-CG2 3.44Å; I40-F42 HydrophobicContact CB-CE2 3.84Å; I40-F42 HydrophobicContact CB-CZ 4.2Å; I40-F42 HydrophobicContact CG2-CD2 4.15Å; I40-F42 HydrophobicContact CG2-CE1 4.17Å; I40-F42 HydrophobicContact CG2-CE2 3.47Å; I40-F42 VanDerWaalsContact CG2-CE2 3.47Å; I40-F42 HydrophobicContact CG2-CZ 3.48Å; I40-F42 VanDerWaalsContact CG2-CZ 3.48Å; I40-V55 CarbonylContact O-C 3.41Å; I40-V55 WeakPolarHBondContact O-CA 3.46Å; I40-T56 WeakPolarHBondContact CB-OG1 3.14Å; I40-T56 PolarHBondContact N-O 2.83Å; I40-T56 PolarHBondContact O-N 3.02Å; I40-T56 PolarHBondContact O-OG1 2.94Å
41V69.3Low67.9Low4 Ų482.7 Ų82.72%0.02440%0.404CS..EExtended strand (participates in β ladder)trans-101.9119179.7-177.10000109.2V31 R32 R53 C54 V55V31-V41 CarbonylContact C-O 3.54Å; V31-V41 WeakPolarHBondContact CA-O 3.34Å; R32-V41 HydrophobicContact CB-CB 4.44Å; R32-V41 PolarHBondContact N-O 2.84Å; R32-V41 WeakPolarHBondContact O-CA 3.44Å; R32-V41 WeakPolarHBondContact O-CB 3.29Å; R32-V41 PolarHBondContact O-N 3.15Å; V41-R53 HydrophobicContact CG1-CG 3.46Å; V41-R53 VanDerWaalsContact CG1-CG 3.46Å; V41-C54 CarbonylContact C-O 3.56Å; V41-C54 WeakPolarHBondContact CA-O 3.35Å; V41-V55 HydrophobicContact CG2-CG2 4.37Å
42F69Low67.5Low58 Ų5879.7 Ų79.725%0.25439%0.385SS..EExtended strand (participates in β ladder)trans-104.5121.3173.8-55.9-99.1000109V28 V31 I40 V44 R53 C54 T56V28-F42 HydrophobicContact CG1-CD1 4.21Å; V31-F42 HydrophobicContact CG1-CD1 4.17Å; V31-F42 HydrophobicContact CG1-CE1 4Å; V31-F42 HydrophobicContact CG1-CZ 4.48Å; V31-F42 HydrophobicContact CG2-CD1 3.73Å; V31-F42 HydrophobicContact CG2-CE1 3.99Å; I40-F42 HydrophobicContact CB-CE2 3.84Å; I40-F42 HydrophobicContact CB-CZ 4.2Å; I40-F42 HydrophobicContact CG2-CD2 4.15Å; I40-F42 HydrophobicContact CG2-CE1 4.17Å; I40-F42 HydrophobicContact CG2-CE2 3.47Å; I40-F42 VanDerWaalsContact CG2-CE2 3.47Å; I40-F42 HydrophobicContact CG2-CZ 3.48Å; I40-F42 VanDerWaalsContact CG2-CZ 3.48Å; F42-V44 HydrophobicContact CB-CG2 3.91Å; F42-R53 CarbonylContact O-C 3.57Å; F42-R53 VanDerWaalsContact O-CA 3.26Å; F42-R53 WeakPolarHBondContact O-CA 3.34Å; F42-C54 HydrophobicContact CB-CB 4.12Å; F42-C54 HydrophobicContact CD2-CB 4.13Å; F42-C54 PolarHBondContact N-O 3.31Å; F42-C54 PolarHBondContact O-N 3.16Å; F42-T56 HydrophobicContact CD2-CG2 4.21Å; F42-T56 HydrophobicContact CE2-CG2 3.66Å
43E69.2Low66.8Low44 Ų4481.1 Ų81.121%0.20639%0.391CS..EExtended strand (participates in β ladder)trans-90.7110.3164.2-69170.7-148.500107.2L29 R30 R32 I51 L52L29-E43 PolarHBondContact N-O 3.1Å; R30-E43 HydrophobicContact CB-CB 4.11Å; R30-E43 PolarHBondContact N-O 3.48Å; R30-E43 PolarHBondContact O-N 2.83Å; R32-E43 IonicContact CZ-OE1 2.76Å; R32-E43 VanDerWaalsContact CZ-OE1 3.23Å; R32-E43 IonicContact NE-OE1 3.7Å; R32-E43 PolarHBondContact NE-OE1 2.83Å; R32-E43 IonicContact NH2-OE1 3.87Å; R32-E43 PolarHBondContact NH2-OE1 3.43Å; R32-E43 IonicContact NH2-OE2 2.72Å; E43-I51 HydrophobicContact CB-CG2 4.05Å; E43-I51 HydrophobicContact CG-CG2 4.38Å; E43-L52 CarbonylContact C-O 3.53Å; E43-L52 VanDerWaalsContact CA-O 3.29Å; E43-L52 WeakPolarHBondContact CA-O 3.4Å
44V68.8Low66.4Low13 Ų1374.6 Ų74.68%0.07937%0.368CS..EExtended strand (participates in β ladder)trans-112.7127.9-174.6-173.50000109.4A26 V28 F42 L46 I51 L52A26-V44 HydrophobicContact CB-CG1 3.29Å; V28-V44 HydrophobicContact CG2-CG2 4.25Å; F42-V44 HydrophobicContact CB-CG2 3.91Å; V44-L46 HydrophobicContact CG1-CD2 4.11Å; V44-I51 CarbonylContact O-C 3.55Å; V44-I51 WeakPolarHBondContact O-CA 3.19Å; V44-L52 HydrophobicContact CB-CB 4.2Å; V44-L52 PolarHBondContact N-O 3.25Å; V44-L52 PolarHBondContact O-N 2.76Å
45N67.9Low65.8Low60 Ų6071.4 Ų71.432%0.32136%0.361SS..EExtended strand (participates in β ladder)trans-83.1120172-171-3.7000109.6K27 L29 G47 Y50K27-N45 PolarHBondContact N-O 3.13Å; K27-N45 PolarHBondContact O-N 3.46Å; L29-N45 HydrophobicContact CD1-CB 3.8Å; L29-N45 HydrophobicContact CD2-CB 3.8Å; L29-N45 HydrophobicContact CG-CB 3.68Å; N45-G47 WeakPolarHBondContact OD1-CA 3.48Å; N45-G47 PolarHBondContact OD1-N 2.75Å; N45-Y50 WeakPolarHBondContact CA-O 3.44Å; N45-Y50 PolarHBondContact OD1-O 3.01Å
46L66.4Low65Low49 Ų4967 Ų6726%0.25734%0.34SS..EExtended strand (participates in β ladder)trans-96.25.3175.1-54.4179.4000112.6F24 A26 V44 Y50 L52F24-L46 HydrophobicContact CD2-CD2 4.27Å; F24-L46 HydrophobicContact CE2-CD2 3.47Å; F24-L46 VanDerWaalsContact CE2-CD2 3.47Å; F24-L46 HydrophobicContact CZ-CD2 4.25Å; A26-L46 HydrophobicContact CB-CD2 4.05Å; V44-L46 HydrophobicContact CG1-CD2 4.11Å; L46-Y50 PolarHBondContact N-O 2.8Å; L46-Y50 VanDerWaalsContact N-O 3.1Å; L46-L52 HydrophobicContact CD1-CB 4.04Å; L46-L52 HydrophobicContact CG-CB 4.26Å
47G63.6Low63.9Low31 Ų3168.6 Ų68.632%0.3234%0.336SS..EExtended strand (participates in β ladder)trans91170.8-172.600000112.7N45 N49 Y50N45-G47 WeakPolarHBondContact OD1-CA 3.48Å; N45-G47 PolarHBondContact OD1-N 2.75Å; G47-N49 PolarHBondContact O-N 2.97Å; G47-Y50 WeakPolarHBondContact O-CD2 3.42Å; G47-Y50 PolarHBondContact O-N 2.76Å
48K60.7Low62.6Low189 Ų18971.2 Ų71.282%0.82236%0.357SS*.THydrogen-bonded Turntrans36.743.2174.8-65.1-175.1-179.3174.50116.3Y50K48-Y50 HydrophobicContact CB-CD2 4.46Å; K48-Y50 HydrophobicContact CB-CE2 4.14Å; K48-Y50 WeakPolarHBondContact O-CE2 3.26Å
49N56.1Low61.5Low164 Ų16475 Ų7588%0.87737%0.37SS*.THydrogen-bonded Turntrans8218.5175.7-44.3-61.5000116.8G47G47-N49 PolarHBondContact O-N 2.97Å
50Y55.2Low60.7Low67 Ų6778.1 Ų78.126%0.26339%0.391SS..EExtended strand (participates in β ladder)trans-100.8127.7178.2-57-67.9000112.1N45 L46 G47 K48 Y68N45-Y50 WeakPolarHBondContact CA-O 3.44Å; N45-Y50 PolarHBondContact OD1-O 3.01Å; L46-Y50 PolarHBondContact N-O 2.8Å; L46-Y50 VanDerWaalsContact N-O 3.1Å; G47-Y50 WeakPolarHBondContact O-CD2 3.42Å; G47-Y50 PolarHBondContact O-N 2.76Å; K48-Y50 HydrophobicContact CB-CD2 4.46Å; K48-Y50 HydrophobicContact CB-CE2 4.14Å; K48-Y50 WeakPolarHBondContact O-CE2 3.26Å; Y50-Y68 WeakPolarHBondContact OH-CE2 3.38Å
51I58.3Low59.9Low110 Ų11079.8 Ų79.856%0.56440%0.401SS*.EExtended strand (participates in β ladder)trans-117.8114.1173.4-58.1173.4000108.1L29 E43 V44L29-I51 HydrophobicContact CD1-CG1 4.5Å; E43-I51 HydrophobicContact CB-CG2 4.05Å; E43-I51 HydrophobicContact CG-CG2 4.38Å; V44-I51 CarbonylContact O-C 3.55Å; V44-I51 WeakPolarHBondContact O-CA 3.19Å
52L63.4Low59Low18 Ų1882.5 Ų82.59%0.09442%0.417CS..EExtended strand (participates in β ladder)trans-88.2139172.8173.266.4000109.9E43 V44 L46 C54 V62E43-L52 CarbonylContact C-O 3.53Å; E43-L52 VanDerWaalsContact CA-O 3.29Å; E43-L52 WeakPolarHBondContact CA-O 3.4Å; V44-L52 HydrophobicContact CB-CB 4.2Å; V44-L52 PolarHBondContact N-O 3.25Å; V44-L52 PolarHBondContact O-N 2.76Å; L46-L52 HydrophobicContact CD1-CB 4.04Å; L46-L52 HydrophobicContact CG-CB 4.26Å; L52-C54 WeakPolarHBondContact CD2-SG 3.39Å; L52-V62 HydrophobicContact CD1-CB 3.85Å; L52-V62 HydrophobicContact CD1-CG1 3.87Å; L52-V62 HydrophobicContact CD1-CG2 3.62Å; L52-V62 HydrophobicContact CD2-CG2 4.27Å
53R59.6Low58Low139 Ų13990.3 Ų90.353%0.52545%0.445SS..EExtended strand (participates in β ladder)trans-11493175.9-170.6-179.6176.2176.3-0.1110.9V41 F42V41-R53 HydrophobicContact CG1-CG 3.46Å; V41-R53 VanDerWaalsContact CG1-CG 3.46Å; F42-R53 CarbonylContact O-C 3.57Å; F42-R53 VanDerWaalsContact O-CA 3.26Å; F42-R53 WeakPolarHBondContact O-CA 3.34Å
54C60.8Low57.2Low13 Ų1390 Ų909%0.08845%0.445CS..EExtended strand (participates in β ladder)trans-83.1133.2176.3-56.80000110.3V41 F42 L52 C60V41-C54 CarbonylContact C-O 3.56Å; V41-C54 WeakPolarHBondContact CA-O 3.35Å; F42-C54 HydrophobicContact CB-CB 4.12Å; F42-C54 HydrophobicContact CD2-CB 4.13Å; F42-C54 PolarHBondContact N-O 3.31Å; F42-C54 PolarHBondContact O-N 3.16Å; L52-C54 WeakPolarHBondContact CD2-SG 3.39Å; C54-C60 HydrophobicContact CB-CB 4.07Å
55V60.4Low56.1Low48 Ų4892.4 Ų92.429%0.29146%0.461SS..EExtended strand (participates in β ladder)trans-119.390-179.5-176.40000109.3T39 I40 V41 R57 F59T39-V55 VanDerWaalsContact CB-CG1 3.48Å; T39-V55 HydrophobicContact CG2-CG1 3.57Å; I40-V55 CarbonylContact O-C 3.41Å; I40-V55 WeakPolarHBondContact O-CA 3.46Å; V41-V55 HydrophobicContact CG2-CG2 4.37Å; V55-R57 PolarHBondContact O-N 2.88Å; V55-R57 VanDerWaalsContact O-N 3.12Å; V55-F59 CarbonylContact C-O 3.5Å
56T55.9Low55.6Low46 Ų4697 Ų9728%0.28248%0.48SS..EExtended strand (participates in β ladder)trans-78.5108.1-177.465.10000110.4I40 F42I40-T56 WeakPolarHBondContact CB-OG1 3.14Å; I40-T56 PolarHBondContact N-O 2.83Å; I40-T56 PolarHBondContact O-N 3.02Å; I40-T56 PolarHBondContact O-OG1 2.94Å; F42-T56 HydrophobicContact CD2-CG2 4.21Å; F42-T56 HydrophobicContact CE2-CG2 3.66Å
57R54.9Low54.9Low177 Ų177100.8 Ų100.867%0.66850%0.496SS*.THydrogen-bonded Turntrans-100.1-37130.9-96.3-178.5-179.5-162.5-0.7110.9D37 T39 V55D37-R57 PolarHBondContact O-NE 2.95Å; D37-R57 PolarHBondContact O-NH2 3.01Å; T39-R57 HydrophobicContact CG2-CG 4.12Å; V55-R57 PolarHBondContact O-N 2.88Å; V55-R57 VanDerWaalsContact O-N 3.12Å
58S50.3Low54.2Low97 Ų97103.1 Ų103.168%0.67850%0.496SS*.THydrogen-bonded Turntrans-163.26167.5-58.70000113.3
59F49Very low53.8Low172 Ų17297.4 Ų97.475%0.75447%0.474SS*.  trans-143.6148-170-60.9-80000111.5V55V55-F59 CarbonylContact C-O 3.5Å
60C49.9Very low53.5Low76 Ų7694.1 Ų94.151%0.51445%0.453SS..  trans-106.7124.6173.2-62.90000108.7C54C54-C60 HydrophobicContact CB-CB 4.07Å
61D49.4Very low53.1Low101 Ų10196.6 Ų96.654%0.5447%0.467SS..  trans-92.8112.9173.1-160.8-51.2000108.3
62V49.9Very low52.4Low61 Ų6193.7 Ų93.737%0.3745%0.451SS..  trans-100.5105.5-178175.90000108.5L52 L64L52-V62 HydrophobicContact CD1-CB 3.85Å; L52-V62 HydrophobicContact CD1-CG1 3.87Å; L52-V62 HydrophobicContact CD1-CG2 3.62Å; L52-V62 HydrophobicContact CD2-CG2 4.27Å; V62-L64 HydrophobicContact CG1-CD1 3.55Å; V62-L64 HydrophobicContact CG1-CG 3.6Å
63R49.5Very low51.7Low222 Ų22296.7 Ų96.784%0.83847%0.466SS*.  trans-94.796.9170.9-66.3-169.5-179.9-166.3-2110
64L50.9Low51.2Low38 Ų3897.6 Ų97.620%0.19947%0.474CS..  trans-111.3147170.4-68.9168.4000109.4V62 L69 F72V62-L64 HydrophobicContact CG1-CD1 3.55Å; V62-L64 HydrophobicContact CG1-CG 3.6Å; L64-L69 HydrophobicContact CB-CD1 4.41Å; L64-L69 HydrophobicContact CD1-CD1 4.2Å; L64-F72 HydrophobicContact CD1-CB 4.26Å; L64-F72 HydrophobicContact CD1-CD2 4.44Å; L64-F72 HydrophobicContact CD1-CG 4.18Å
65P47Very low50.2Low63 Ų6398.9 Ų98.941%0.40949%0.49SS..  trans-56.6139.4164.1-16.628.7000109.8E67 Y68 L69P65-E67 VanDerWaalsContact C-N 3.26Å; P65-E67 HydrophobicContact CB-CG 4.33Å; P65-E67 PolarHBondContact O-N 2.75Å; P65-Y68 HydrophobicContact CB-CD2 4.17Å; P65-Y68 HydrophobicContact CG-CD2 4.23Å; P65-Y68 PolarHBondContact O-N 2.82Å; P65-L69 PolarHBondContact O-N 3.3Å
66Q56.2Low49.1Very low156 Ų15698.8 Ų98.873%0.72950%0.498SS*.Hα-helixtrans-55.3-38.9-170.7-175.6177.3-10.300113.5Y68 L69 E70Q66-Y68 PolarHBondContact O-N 2.59Å; Q66-L69 WeakPolarHBondContact O-CB 3.5Å; Q66-L69 PolarHBondContact O-N 3.12Å; Q66-L69 VanDerWaalsContact O-N 3.17Å; Q66-E70 PolarHBondContact O-N 2.76Å; Q66-E70 VanDerWaalsContact O-N 3.15Å
67E51.8Low48.2Very low129 Ų129101.1 Ų101.160%0.60352%0.516SS*.Hα-helixtrans-58.5-31.3177.266.3-171.1167.200113.2P65P65-E67 VanDerWaalsContact C-N 3.26Å; P65-E67 HydrophobicContact CB-CG 4.33Å; P65-E67 PolarHBondContact O-N 2.75Å
68Y49.3Very low47.1Very low80 Ų80105.4 Ų105.431%0.31454%0.543SS..Hα-helixtrans-93.3-25.6177.5-70.6-74.5000112.6Y50 P65 Q66 E70 Q71 F72Y50-Y68 WeakPolarHBondContact OH-CE2 3.38Å; P65-Y68 HydrophobicContact CB-CD2 4.17Å; P65-Y68 HydrophobicContact CG-CD2 4.23Å; P65-Y68 PolarHBondContact O-N 2.82Å; Q66-Y68 PolarHBondContact O-N 2.59Å; Y68-E70 PolarHBondContact O-N 3.44Å; Y68-Q71 PolarHBondContact O-N 3.47Å; Y68-Q71 VanDerWaalsContact O-N 3.15Å; Y68-F72 VanDerWaalsContact O-CB 3.22Å; Y68-F72 WeakPolarHBondContact O-CB 3.38Å; Y68-F72 PolarHBondContact O-N 2.86Å
69L51.2Low46.9Very low68 Ų68105.8 Ų105.836%0.35654%0.536SS..Hα-helixtrans-56.1-46.7168.7-167.174.6000108.6L64 P65 Q66 Q71 F72 L73L64-L69 HydrophobicContact CB-CD1 4.41Å; L64-L69 HydrophobicContact CD1-CD1 4.2Å; P65-L69 PolarHBondContact O-N 3.3Å; Q66-L69 WeakPolarHBondContact O-CB 3.5Å; Q66-L69 PolarHBondContact O-N 3.12Å; Q66-L69 VanDerWaalsContact O-N 3.17Å; L69-Q71 PolarHBondContact O-N 3.3Å; L69-F72 PolarHBondContact O-N 2.79Å; L69-L73 HydrophobicContact CD2-CD1 4.31Å; L69-L73 HydrophobicContact CG-CD1 3.91Å; L69-L73 HydrophobicContact CG-CG 4.28Å; L69-L73 VanDerWaalsContact O-CB 3.27Å; L69-L73 WeakPolarHBondContact O-CB 3.49Å; L69-L73 WeakPolarHBondContact O-CG 3.39Å; L69-L73 PolarHBondContact O-N 2.8Å
70E50.9Low46.8Very low95 Ų95102.3 Ų102.344%0.44453%0.525SS..Hα-helixtrans-61-40.4174.8-69.2-159.9177.500113.7Q66 Y68 L73 K74Q66-E70 PolarHBondContact O-N 2.76Å; Q66-E70 VanDerWaalsContact O-N 3.15Å; Y68-E70 PolarHBondContact O-N 3.44Å; E70-L73 PolarHBondContact O-N 2.83Å; E70-K74 HydrophobicContact CB-CD 4.42Å; E70-K74 WeakPolarHBondContact O-CB 3.38Å; E70-K74 WeakPolarHBondContact O-CG 3.39Å; E70-K74 PolarHBondContact O-N 3.3Å; E70-K74 IonicContact OE2-NZ 3.5Å; E70-K74 PolarHBondContact OE2-NZ 3.34Å
71Q45.9Very low46.6Very low119 Ų119103.8 Ų103.856%0.55653%0.526SS*.Hα-helixtrans-66.9-41177.6-70.9-179.813.500112Y68 L69 L73 K74 G75Y68-Q71 PolarHBondContact O-N 3.47Å; Y68-Q71 VanDerWaalsContact O-N 3.15Å; L69-Q71 PolarHBondContact O-N 3.3Å; Q71-L73 VanDerWaalsContact C-N 3.34Å; Q71-K74 PolarHBondContact O-N 2.98Å; Q71-G75 WeakPolarHBondContact O-CA 3.46Å; Q71-G75 PolarHBondContact O-N 3.31Å
72F44.2Very low46.5Very low50 Ų50103.9 Ų103.922%0.21953%0.525CS..Hα-helixtrans-65.1-40.1176.6-166.3-90.1000111.1F24 L64 Y68 L69F24-F72 HydrophobicContact CD1-CZ 4.08Å; F24-F72 HydrophobicContact CE1-CE1 4.33Å; F24-F72 HydrophobicContact CE1-CE2 4.36Å; F24-F72 AromaticContact CE1-CZ 3.5Å; F24-F72 HydrophobicContact CE1-CZ 3.5Å; F24-F72 VanDerWaalsContact CE1-CZ 3.5Å; F24-F72 HydrophobicContact CE2-CZ 4.45Å; F24-F72 HydrophobicContact CZ-CE2 4.36Å; F24-F72 AromaticContact CZ-CZ 3.71Å; F24-F72 HydrophobicContact CZ-CZ 3.71Å; L64-F72 HydrophobicContact CD1-CB 4.26Å; L64-F72 HydrophobicContact CD1-CD2 4.44Å; L64-F72 HydrophobicContact CD1-CG 4.18Å; Y68-F72 VanDerWaalsContact O-CB 3.22Å; Y68-F72 WeakPolarHBondContact O-CB 3.38Å; Y68-F72 PolarHBondContact O-N 2.86Å; L69-F72 PolarHBondContact O-N 2.79Å
73L48.7Very low46.2Very low80 Ų80106.6 Ų106.642%0.41953%0.534SS..Hα-helixtrans-72.5-35.7176-67.3176.1000113.2Y17 L69 E70 Q71Y17-L73 HydrophobicContact CD2-CD2 3.09Å; Y17-L73 HydrophobicContact CE2-CD2 3.03Å; Y17-L73 HydrophobicContact CG-CD2 4.21Å; L69-L73 HydrophobicContact CD2-CD1 4.31Å; L69-L73 HydrophobicContact CG-CD1 3.91Å; L69-L73 HydrophobicContact CG-CG 4.28Å; L69-L73 VanDerWaalsContact O-CB 3.27Å; L69-L73 WeakPolarHBondContact O-CB 3.49Å; L69-L73 WeakPolarHBondContact O-CG 3.39Å; L69-L73 PolarHBondContact O-N 2.8Å; E70-L73 PolarHBondContact O-N 2.83Å; Q71-L73 VanDerWaalsContact C-N 3.34Å
74K49.2Very low46Very low158 Ų15898.9 Ų98.969%0.68751%0.514SS*.Hα-helixtrans-90-22.1-175.1-72.9171.8178.7166.70113.6E70 Q71E70-K74 HydrophobicContact CB-CD 4.42Å; E70-K74 WeakPolarHBondContact O-CB 3.38Å; E70-K74 WeakPolarHBondContact O-CG 3.39Å; E70-K74 PolarHBondContact O-N 3.3Å; E70-K74 IonicContact OE2-NZ 3.5Å; E70-K74 PolarHBondContact OE2-NZ 3.34Å; Q71-K74 PolarHBondContact O-N 2.98Å
75G39.1Very low45.7Very low41 Ų41103.3 Ų103.342%0.42354%0.537SS..SBendtrans-142.662.9-164.100000111.9Q71 C77Q71-G75 WeakPolarHBondContact O-CA 3.46Å; Q71-G75 PolarHBondContact O-N 3.31Å; G75-C77 PolarHBondContact O-N 3.16Å
76G37.3Very low45.6Very low45 Ų45106.4 Ų106.446%0.46455%0.547SS..  trans-27.9114.1167.300000110Q78G76-Q78 PolarHBondContact O-N 2.87Å
77C37Very low44.7Very low96 Ų96102.3 Ų102.365%0.64953%0.531SS*.  trans-54115.1-167.4-71.20000109.3G75G75-C77 PolarHBondContact O-N 3.16Å
78Q31.5Very low44Very low266 Ų26699.8 Ų99.8100%1.24353%0.525SS*.  trans-58.60170.2-73.2-176.6-14.800111.8G76G76-Q78 PolarHBondContact O-N 2.87Å

Retrieved 78 of 78 residues in 22.7 ms (Link to these results)