A0A077ZGL6_TRITR Loading...

DNA directed RNA polymerase II subunit RPB9

AlphaFold DB , UniProt , Accession A0A077ZGL6, Species TRITR (Trichuris trichiura, Whipworm), Gene n/a, Length 122 aa.

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Site Residue pLDDT pLDDT confidence pLDDT10 pLDDT10 confidence SASA SASA [Ų] SASA10 SASA10 [Ų] RSA RSA unformatted RSA10 RSA10 unformatted Surface Surface10 (not used) Disorder (not used) Disorder Sec. str. Secondary structure Isomer Phi (φ) Psi (ψ) Omega (ω) Chi 1 (χ1) Chi 2 (χ2) Chi 3 (χ3) Chi 4 (χ4) Chi 5 (χ5) Tau (τ) Contacts (colored by PAE) Contact details
1M39.1Very low45.3Very low246 Ų246133.4 Ų133.4100%1.21274%0.742SS**  094.20-65.5-171.9170.500108
2Q29.3Very low48.4Very low188 Ų188125.4 Ų125.488%0.87970%0.699SS**  trans-115.495.3170.7-81.6164.417.800106.2N4Q2-N4 PolarHBondContact O-N 3.06Å
3S31.4Very low51.2Low105 Ų105118.1 Ų118.173%0.73467%0.669SS**  trans-66.796.3170.537.90000107.9V5S3-V5 PolarHBondContact O-N 2.85Å
4N30.9Very low54.1Low156 Ų156117.9 Ų117.983%0.83466%0.664SS**  trans-67.176.8159.2-86-26.7000107.7Q2 S6Q2-N4 PolarHBondContact O-N 3.06Å; N4-S6 PolarHBondContact O-N 3.21Å
5V36.8Very low56.6Low111 Ų111113.7 Ų113.767%0.67364%0.635SS**  trans-68.693.5160179.60000104.7S3 T7S3-V5 PolarHBondContact O-N 2.85Å; V5-T7 PolarHBondContact O-N 3.12Å; V5-T7 PolarHBondContact O-OG1 3.15Å
6S36.4Very low59Low107 Ų107113.8 Ų113.875%0.74863%0.627SS**  trans-6185.5165.635.30000107.3N4 P8N4-S6 PolarHBondContact O-N 3.21Å; S6-P8 VanDerWaalsContact O-N 3.11Å
7T47.5Very low61.2Low104 Ų104107.2 Ų107.264%0.63859%0.591SS**  trans-52.2121.5168.3-30.30000105.3V5 L9V5-T7 PolarHBondContact O-N 3.12Å; V5-T7 PolarHBondContact O-OG1 3.15Å; T7-L9 PolarHBondContact O-N 3.2Å
8P54.7Low63.1Low107 Ų107106.6 Ų106.670%0.69559%0.593SS**  trans-51.2122.6-177.219.6-31000106.7S6 S10S6-P8 VanDerWaalsContact O-N 3.11Å; P8-S10 VanDerWaalsContact C-N 3.29Å; P8-S10 VanDerWaalsContact O-CA 3.28Å; P8-S10 WeakPolarHBondContact O-CA 3.22Å; P8-S10 PolarHBondContact O-N 3.08Å
9L58.2Low64.9Low108 Ų108108 Ų10857%0.56560%0.595SS**  trans-39.898-170.8-79.3163000108.6T7 F11 V55 R57T7-L9 PolarHBondContact O-N 3.2Å; L9-F11 PolarHBondContact O-N 2.68Å; L9-V55 HydrophobicContact CB-CG1 4.09Å; L9-V55 HydrophobicContact CB-CG2 4.21Å; L9-V55 HydrophobicContact CD1-CG1 4.09Å; L9-V55 HydrophobicContact CD2-CG2 4.32Å; L9-R57 PolarHBondContact O-NH2 3.36Å
10S63.7Low66.4Low59 Ų59105 Ų10541%0.41358%0.581SS.*  trans-64.8140.6-167.346.70000106.7P8 V12 N50P8-S10 VanDerWaalsContact C-N 3.29Å; P8-S10 VanDerWaalsContact O-CA 3.28Å; P8-S10 WeakPolarHBondContact O-CA 3.22Å; P8-S10 PolarHBondContact O-N 3.08Å; S10-V12 PolarHBondContact O-N 2.98Å; S10-N50 PolarHBondContact OG-ND2 2.83Å
11F70.6Confident67.8Low176 Ų176105.8 Ų105.877%0.77258%0.584SS**  trans-47.9117.7179.6173.2-102.6000109.3L9 G13L9-F11 PolarHBondContact O-N 2.68Å; F11-G13 VanDerWaalsContact C-N 3.33Å; F11-G13 VanDerWaalsContact CE1-CA 3.4Å; F11-G13 PolarHBondContact O-N 3.07Å
12V82Confident70.5Confident38 Ų3897.1 Ų97.123%0.2354%0.543CS..  trans-80.391.2176.6-1770000106.6S10 C52 I53 V55S10-V12 PolarHBondContact O-N 2.98Å; V12-C52 WeakPolarHBondContact CG1-O 3.27Å; V12-C52 HydrophobicContact CG2-CB 4.05Å; V12-C52 WeakPolarHBondContact CG2-O 3.46Å; V12-I53 WeakPolarHBondContact CG1-O 3.41Å; V12-V55 HydrophobicContact CG2-CG2 3.76Å
13G85.7Confident73.7Confident30 Ų3091.9 Ų91.931%0.30952%0.52SS..  trans-71149.3-17900000113F11F11-G13 VanDerWaalsContact C-N 3.33Å; F11-G13 VanDerWaalsContact CE1-CA 3.4Å; F11-G13 PolarHBondContact O-N 3.07Å
14I91.1Very high76.8Confident115 Ų11587.3 Ų87.359%0.5949%0.487SS*.  trans-66.1131.4171.6-58170.6000108.3F16 M23I14-F16 HydrophobicContact CG2-CE1 4.35Å; I14-F16 HydrophobicContact CG2-CE2 4.07Å; I14-F16 HydrophobicContact CG2-CZ 3.89Å; I14-M23 HydrophobicContact CG2-CG 3.83Å; I14-M23 HydrophobicContact CG2-SD 3.9Å
15K92Very high79.8Confident55 Ų5583.5 Ų83.524%0.23946%0.461CS..  trans-105.5141.2175.7-65.2-166.6174.3-166.70110.8L24 Y37 D49K15-L24 HydrophobicContact CB-CB 4.37Å; K15-L24 HydrophobicContact CB-CD1 4.12Å; K15-L24 PolarHBondContact O-N 3.31Å; K15-Y37 HydrophobicContact CD-CD2 3.92Å; K15-Y37 HydrophobicContact CD-CE2 3.81Å; K15-Y37 HydrophobicContact CD-CG 4.37Å; K15-D49 IonicContact NZ-OD2 3.8Å; K15-D49 PolarHBondContact NZ-OD2 3.2Å
16F95.4Very high82.6Confident116 Ų11681 Ų8151%0.50945%0.447SS..BIsolated β-bridgetrans-112.2147.4179.9-66-80.7000111.4I14 L24I14-F16 HydrophobicContact CG2-CE1 4.35Å; I14-F16 HydrophobicContact CG2-CE2 4.07Å; I14-F16 HydrophobicContact CG2-CZ 3.89Å; F16-L24 WeakPolarHBondContact O-CD1 3.37Å
17C96.4Very high85.4Confident2 Ų282.6 Ų82.61%0.01444%0.437CS..  trans-70.5129.5176.4177.50000110E19 C20 N21 N22 L24 C39C17-E19 PolarHBondContact O-N 3.39Å; C17-E19 PolarHBondContact SG-N 3.15Å; C17-C20 VanDerWaalsContact SG-SG 3.63Å; C17-N21 WeakPolarHBondContact O-CA 3.31Å; C17-N21 PolarHBondContact O-N 2.95Å; C17-N22 WeakPolarHBondContact CB-O 3.24Å; C17-N22 PolarHBondContact N-O 2.95Å; C17-L24 HydrophobicContact CB-CD2 3.76Å; C17-L24 HydrophobicContact CB-CG 4.24Å; C17-C39 HydrophobicContact CB-CB 4.23Å
18P95.5Very high87.6Confident96 Ų9683.6 Ų83.662%0.62343%0.434SS*.THydrogen-bonded Turntrans-68.2-21.5179.628.1-34.5000113.5H44P18-H44 VanDerWaalsContact CD-NE2 3.32Å; P18-H44 WeakPolarHBondContact CD-NE2 3.28Å; P18-H44 VanDerWaalsContact CG-CE1 3.4Å; P18-H44 WeakPolarHBondContact CG-CE1 3.27Å
19E95.6Very high89.5Confident133 Ų13380.2 Ų80.262%0.62141%0.411SS*.THydrogen-bonded Turntrans-87-45.7-177.4-59.4-178.4167.200112.9C17 C42C17-E19 PolarHBondContact O-N 3.39Å; C17-E19 PolarHBondContact SG-N 3.15Å; E19-C42 PolarHBondContact OE2-SG 3.36Å
20C96.6Very high91.2Very high48 Ų4882.8 Ų82.832%0.32442%0.417SS..THydrogen-bonded Turntrans-1234.2-171.9660000114.4C17 N22 C39C17-C20 VanDerWaalsContact SG-SG 3.63Å; C20-N22 PolarHBondContact O-N 3.13Å; C20-C39 PolarHBondContact SG-SG 2.07Å
21N95.5Very high92.7Very high121 Ų12188.6 Ų88.665%0.64744%0.438SS*.  trans54.521.3179.6-157.331.6000115.2C17C17-N21 WeakPolarHBondContact O-CA 3.31Å; C17-N21 PolarHBondContact O-N 2.95Å
22N96.1Very high93.8Very high65 Ų6586.6 Ų86.635%0.34843%0.431SS..PPolyproline II helixtrans-84.7155.6172.5-78.4-52.9000111.4C17 C20 L24 N41C17-N22 WeakPolarHBondContact CB-O 3.24Å; C17-N22 PolarHBondContact N-O 2.95Å; C20-N22 PolarHBondContact O-N 3.13Å; N22-L24 PolarHBondContact O-N 2.66Å; N22-N41 PolarHBondContact ND2-OD1 2.85Å
23M95.2Very high94.4Very high78 Ų7895.1 Ų95.138%0.38446%0.459SS..BIsolated β-bridgetrans-61.1131.2177.5-171.9169.771.700111.2I14 Y25I14-M23 HydrophobicContact CG2-CG 3.83Å; I14-M23 HydrophobicContact CG2-SD 3.9Å; M23-Y25 HydrophobicContact CE-CD1 4.37Å; M23-Y25 HydrophobicContact CE-CE1 3.46Å; M23-Y25 VanDerWaalsContact CE-CE1 3.46Å; M23-Y25 HydrophobicContact CE-CE2 4.23Å; M23-Y25 VanDerWaalsContact CE-OH 3.23Å; M23-Y25 WeakPolarHBondContact CE-OH 3.34Å; M23-Y25 WeakPolarHBondContact O-CD2 3.24Å; M23-Y25 WeakPolarHBondContact O-CE2 3.39Å
24L96.2Very high94.8Very high8 Ų896 Ų964%0.04246%0.458CS..PPolyproline II helixtrans-84.9140.6174.6-66.8174000111.1K15 F16 C17 N22 Y37 C39 Q46K15-L24 HydrophobicContact CB-CB 4.37Å; K15-L24 HydrophobicContact CB-CD1 4.12Å; K15-L24 PolarHBondContact O-N 3.31Å; F16-L24 WeakPolarHBondContact O-CD1 3.37Å; C17-L24 HydrophobicContact CB-CD2 3.76Å; C17-L24 HydrophobicContact CB-CG 4.24Å; N22-L24 PolarHBondContact O-N 2.66Å; L24-Y37 HydrophobicContact CB-CD1 4.21Å; L24-Y37 HydrophobicContact CB-CG 4.49Å; L24-C39 HydrophobicContact CD2-CB 3.86Å; L24-Q46 HydrophobicContact CD1-CG 4.35Å
25Y95.4Very high94.9Very high77 Ų7792.4 Ų92.430%0.30244%0.44SS..EExtended strand (participates in β ladder)trans-111.2139.9-179.5-66.2-91.3000111.6M23 Y37 S38 R40M23-Y25 HydrophobicContact CE-CD1 4.37Å; M23-Y25 HydrophobicContact CE-CE1 3.46Å; M23-Y25 VanDerWaalsContact CE-CE1 3.46Å; M23-Y25 HydrophobicContact CE-CE2 4.23Å; M23-Y25 VanDerWaalsContact CE-OH 3.23Å; M23-Y25 WeakPolarHBondContact CE-OH 3.34Å; M23-Y25 WeakPolarHBondContact O-CD2 3.24Å; M23-Y25 WeakPolarHBondContact O-CE2 3.39Å; Y25-Y37 CarbonylContact O-C 3.57Å; Y25-Y37 WeakPolarHBondContact O-CA 3.48Å; Y25-S38 PolarHBondContact N-O 3.04Å; Y25-S38 PolarHBondContact O-N 3.24Å; Y25-S38 PolarHBondContact O-OG 3.43Å; Y25-R40 HydrophobicContact CD2-CG 3.72Å; Y25-R40 HydrophobicContact CE2-CG 3.84Å
26P94.5Very high95.1Very high59 Ų5991.3 Ų91.338%0.38344%0.436SS..EExtended strand (participates in β ladder)trans-63.4134.5174.428.6-35.8000110.7L35 M36 Y37 I53P26-L35 HydrophobicContact CB-CD1 4.03Å; P26-M36 CarbonylContact C-O 3.49Å; P26-M36 WeakPolarHBondContact CA-O 3.49Å; P26-Y37 HydrophobicContact CB-CE1 4.48Å; P26-I53 HydrophobicContact CB-CD1 4.21Å; P26-I53 HydrophobicContact CB-CG2 3.62Å; P26-I53 HydrophobicContact CG-CG2 3.47Å; P26-I53 VanDerWaalsContact CG-CG2 3.47Å
27R94.5Very high95.1Very high139 Ų13986.6 Ų86.653%0.52542%0.415SS..EExtended strand (participates in β ladder)trans-145.2137.7179.9-171.1177.2-177.4168.21.7109.6M36 S38R27-M36 PolarHBondContact N-O 3.33Å; R27-M36 WeakPolarHBondContact O-CA 3.23Å; R27-M36 WeakPolarHBondContact O-CB 3.38Å; R27-M36 PolarHBondContact O-N 2.8Å; R27-M36 VanDerWaalsContact O-O 3.08Å; R27-S38 WeakPolarHBondContact CD-OG 3.43Å
28E95.3Very high95.1Very high126 Ų12687 Ų8759%0.58942%0.418SS*.EExtended strand (participates in β ladder)trans-82.6132.4175.4-176.1-174.1-16800110.8K30E28-K30 HydrophobicContact CG-CG 4.28Å
29N93.7Very high95.1Very high36 Ų3683.1 Ų83.119%0.19339%0.393CS..EExtended strand (participates in β ladder)trans-91.5106.2158.6-177.1-2.1000108.7E31 E32 R33 V34 M36N29-E31 VanDerWaalsContact C-N 3.34Å; N29-E31 PolarHBondContact O-N 2.98Å; N29-E31 PolarHBondContact OD1-N 3.12Å; N29-E32 PolarHBondContact ND2-OE2 3.13Å; N29-E32 VanDerWaalsContact ND2-OE2 3.07Å; N29-R33 WeakPolarHBondContact O-CA 3.46Å; N29-R33 PolarHBondContact O-N 3.29Å; N29-V34 HydrophobicContact CB-CG2 3.79Å; N29-V34 PolarHBondContact N-O 3.4Å; N29-V34 PolarHBondContact O-N 3.29Å; N29-M36 HydrophobicContact CB-CG 4.31Å; N29-M36 HydrophobicContact CB-SD 3.66Å
30K94Very high95.1Very high162 Ų16285.5 Ų85.570%0.70440%0.396SS*.THydrogen-bonded Turntrans-69.5-29.6-172.3-65.4-176.6178.7-176.40113.8E28E28-K30 HydrophobicContact CG-CG 4.28Å
31E95.4Very high95.1Very high181 Ų18188.9 Ų88.985%0.84641%0.411SS*.THydrogen-bonded Turntrans-71.5-48.7-176.8-67.6165.4-165.500110.2N29N29-E31 VanDerWaalsContact C-N 3.34Å; N29-E31 PolarHBondContact O-N 2.98Å; N29-E31 PolarHBondContact OD1-N 3.12Å
32E94.3Very high95.1Very high133 Ų13384.7 Ų84.762%0.62139%0.391SS*.THydrogen-bonded Turntrans-89.4-10.7-179.9-65.4-179.2159.200113.2N29 V34N29-E32 PolarHBondContact ND2-OE2 3.13Å; N29-E32 VanDerWaalsContact ND2-OE2 3.07Å; E32-V34 VanDerWaalsContact C-N 3.27Å; E32-V34 HydrophobicContact CB-CG1 4.21Å; E32-V34 HydrophobicContact CB-CG2 3.89Å; E32-V34 PolarHBondContact O-N 3.36Å
33R93.2Very high95.1Very high218 Ų21888.4 Ų88.482%0.82341%0.41SS*.THydrogen-bonded Turntrans55.241.1-174.7-57178.6178.5176.4-0.6112.8N29N29-R33 WeakPolarHBondContact O-CA 3.46Å; N29-R33 PolarHBondContact O-N 3.29Å
34V94.6Very high95.1Very high48 Ų4886.2 Ų86.229%0.29140%0.399SS..EExtended strand (participates in β ladder)trans-111.5144178.7-62.90000111.7N29 E32 M36N29-V34 HydrophobicContact CB-CG2 3.79Å; N29-V34 PolarHBondContact N-O 3.4Å; N29-V34 PolarHBondContact O-N 3.29Å; E32-V34 VanDerWaalsContact C-N 3.27Å; E32-V34 HydrophobicContact CB-CG1 4.21Å; E32-V34 HydrophobicContact CB-CG2 3.89Å; E32-V34 PolarHBondContact O-N 3.36Å; V34-M36 HydrophobicContact CG2-CG 4.12Å; V34-M36 HydrophobicContact CG2-SD 4.41Å
35L94.1Very high95.1Very high39 Ų3992.4 Ų92.420%0.20442%0.422CS..EExtended strand (participates in β ladder)trans-77.6129.9169.4177.966.3000109.1P26 A48 I53P26-L35 HydrophobicContact CB-CD1 4.03Å; L35-A48 HydrophobicContact CB-CB 4.01Å; L35-A48 HydrophobicContact CD2-CB 3.69Å; L35-A48 HydrophobicContact CG-CB 3.63Å; L35-A48 VanDerWaalsContact O-CB 3.31Å; L35-A48 WeakPolarHBondContact O-CB 3.36Å; L35-A48 PolarHBondContact O-N 2.88Å; L35-I53 HydrophobicContact CD1-CD1 3.84Å; L35-I53 HydrophobicContact CD1-CG1 4.48Å; L35-I53 HydrophobicContact CD2-CD1 4.08Å; L35-I53 HydrophobicContact CD2-CG1 3.85Å
36M95Very high95Very high33 Ų3391.4 Ų91.416%0.16342%0.42CS..EExtended strand (participates in β ladder)trans-124.5158.3177-64.1-175.661.200110.9P26 R27 N29 V34 R45 Q46P26-M36 CarbonylContact C-O 3.49Å; P26-M36 WeakPolarHBondContact CA-O 3.49Å; R27-M36 PolarHBondContact N-O 3.33Å; R27-M36 WeakPolarHBondContact O-CA 3.23Å; R27-M36 WeakPolarHBondContact O-CB 3.38Å; R27-M36 PolarHBondContact O-N 2.8Å; R27-M36 VanDerWaalsContact O-O 3.08Å; N29-M36 HydrophobicContact CB-CG 4.31Å; N29-M36 HydrophobicContact CB-SD 3.66Å; V34-M36 HydrophobicContact CG2-CG 4.12Å; V34-M36 HydrophobicContact CG2-SD 4.41Å; M36-R45 HydrophobicContact CE-CB 3.68Å; M36-Q46 CarbonylContact C-O 3.58Å; M36-Q46 VanDerWaalsContact CA-O 3.24Å; M36-Q46 WeakPolarHBondContact CA-O 3.3Å; M36-Q46 WeakPolarHBondContact CB-O 3.45Å
37Y95.8Very high95Very high16 Ų1692.8 Ų92.86%0.06343%0.427CS..EExtended strand (participates in β ladder)trans-106131.3166.5-76.4-76.2000108.6K15 L24 Y25 P26 R45 Q46 A48K15-Y37 HydrophobicContact CD-CD2 3.92Å; K15-Y37 HydrophobicContact CD-CE2 3.81Å; K15-Y37 HydrophobicContact CD-CG 4.37Å; L24-Y37 HydrophobicContact CB-CD1 4.21Å; L24-Y37 HydrophobicContact CB-CG 4.49Å; Y25-Y37 CarbonylContact O-C 3.57Å; Y25-Y37 WeakPolarHBondContact O-CA 3.48Å; P26-Y37 HydrophobicContact CB-CE1 4.48Å; Y37-R45 CarbonylContact O-C 3.47Å; Y37-R45 VanDerWaalsContact O-CA 3.31Å; Y37-R45 WeakPolarHBondContact O-CA 3.21Å; Y37-Q46 PolarHBondContact N-O 3.4Å; Y37-Q46 PolarHBondContact O-N 2.83Å; Y37-A48 HydrophobicContact CD2-CB 3.73Å; Y37-A48 HydrophobicContact CE2-CB 3.5Å
38S95.8Very high94.9Very high12 Ų1287 Ų878%0.08441%0.409CS..EExtended strand (participates in β ladder)trans-130.8141.2-178.759.60000111.6Y25 R27Y25-S38 PolarHBondContact N-O 3.04Å; Y25-S38 PolarHBondContact O-N 3.24Å; Y25-S38 PolarHBondContact O-OG 3.43Å; R27-S38 WeakPolarHBondContact CD-OG 3.43Å
39C97.1Very high94.7Very high13 Ų1387.5 Ų87.59%0.08842%0.416CS..  trans-78.6152.2171.7-165.90000110.6C17 C20 L24 N41 H44C17-C39 HydrophobicContact CB-CB 4.23Å; C20-C39 PolarHBondContact SG-SG 2.07Å; L24-C39 HydrophobicContact CD2-CB 3.86Å; C39-N41 PolarHBondContact SG-N 2.88Å; C39-N41 VanDerWaalsContact SG-N 3.43Å; C39-H44 HydrophobicContact CB-CB 4.41Å; C39-H44 PolarHBondContact N-O 2.98Å
40R95.7Very high94.4Very high183 Ų18388.6 Ų88.669%0.69142%0.422SS*.SBendtrans-91.2-21.4172.3-69.6-176.6180-167.4-1.2113.2Y25Y25-R40 HydrophobicContact CD2-CG 3.72Å; Y25-R40 HydrophobicContact CE2-CG 3.84Å
41N95.4Very high94.2Very high119 Ų11991.1 Ų91.164%0.63643%0.427SS*.SBendtrans-99.6-21.9-172.3-65.879.3000113.2N22 C39N22-N41 PolarHBondContact ND2-OD1 2.85Å; C39-N41 PolarHBondContact SG-N 2.88Å; C39-N41 VanDerWaalsContact SG-N 3.43Å
42C96.2Very high93.9Very high33 Ų3384 Ų8422%0.22340%0.397CS..SBendtrans-138.5177.5174.672.40000110.7E19 H44E19-C42 PolarHBondContact OE2-SG 3.36Å; C42-H44 VanDerWaalsContact C-N 3.26Å; C42-H44 PolarHBondContact O-N 3.18Å; C42-H44 VanDerWaalsContact SG-CB 3.53Å
43D95.7Very high93.7Very high143 Ų14381.8 Ų81.877%0.76539%0.388SS*.SBendtrans-83.45.5-178.2-72.6-47.1000114.5R45D43-R45 PolarHBondContact O-N 3.43Å
44H96.3Very high93.6Very high33 Ų3379.7 Ų79.715%0.15338%0.382CS..  trans-60.1131.4178.4-177.275.9000112.2P18 C39 C42 Q46P18-H44 VanDerWaalsContact CD-NE2 3.32Å; P18-H44 WeakPolarHBondContact CD-NE2 3.28Å; P18-H44 VanDerWaalsContact CG-CE1 3.4Å; P18-H44 WeakPolarHBondContact CG-CE1 3.27Å; C39-H44 HydrophobicContact CB-CB 4.41Å; C39-H44 PolarHBondContact N-O 2.98Å; C42-H44 VanDerWaalsContact C-N 3.26Å; C42-H44 PolarHBondContact O-N 3.18Å; C42-H44 VanDerWaalsContact SG-CB 3.53Å; H44-Q46 PolarHBondContact NE2-OE1 2.65Å
45R94.8Very high93.3Very high137 Ų13779.2 Ų79.252%0.51738%0.379SS..EExtended strand (participates in β ladder)trans-142.7145.7177.2-60177.5-166.71726.9110.1M36 Y37 D43M36-R45 HydrophobicContact CE-CB 3.68Å; Y37-R45 CarbonylContact O-C 3.47Å; Y37-R45 VanDerWaalsContact O-CA 3.31Å; Y37-R45 WeakPolarHBondContact O-CA 3.21Å; D43-R45 PolarHBondContact O-N 3.43Å
46Q94.4Very high92.9Very high57 Ų5782.4 Ų82.427%0.26640%0.396SS..EExtended strand (participates in β ladder)trans-146.5152177.763.8-174.471.900111.4L24 M36 Y37 H44L24-Q46 HydrophobicContact CD1-CG 4.35Å; M36-Q46 CarbonylContact C-O 3.58Å; M36-Q46 VanDerWaalsContact CA-O 3.24Å; M36-Q46 WeakPolarHBondContact CA-O 3.3Å; M36-Q46 WeakPolarHBondContact CB-O 3.45Å; Y37-Q46 PolarHBondContact N-O 3.4Å; Y37-Q46 PolarHBondContact O-N 2.83Å; H44-Q46 PolarHBondContact NE2-OE1 2.65Å
47V93.9Very high92.3Very high88 Ų8886.2 Ų86.253%0.53341%0.409SS..EExtended strand (participates in β ladder)trans-72.9144.4176.2-177.90000110
48A92.6Very high91.6Very high17 Ų1790.7 Ų90.714%0.1444%0.437CS..  trans-84126.817800000111.9L35 Y37 N50L35-A48 HydrophobicContact CB-CB 4.01Å; L35-A48 HydrophobicContact CD2-CB 3.69Å; L35-A48 HydrophobicContact CG-CB 3.63Å; L35-A48 VanDerWaalsContact O-CB 3.31Å; L35-A48 WeakPolarHBondContact O-CB 3.36Å; L35-A48 PolarHBondContact O-N 2.88Å; Y37-A48 HydrophobicContact CD2-CB 3.73Å; Y37-A48 HydrophobicContact CE2-CB 3.5Å; A48-N50 VanDerWaalsContact C-N 3.35Å
49D90.4Very high90.6Very high136 Ų13698.7 Ų98.773%0.72747%0.473SS*.SBendtrans-70.9-32.5176-40.6-61.5000112.3K15K15-D49 IonicContact NZ-OD2 3.8Å; K15-D49 PolarHBondContact NZ-OD2 3.2Å
50N88.5Confident89.2Confident60 Ų60103.7 Ų103.732%0.32150%0.495SS..  trans-116.3139178.8-163.8-17.2000109.8S10 A48 C52S10-N50 PolarHBondContact OG-ND2 2.83Å; A48-N50 VanDerWaalsContact C-N 3.35Å; N50-C52 VanDerWaalsContact C-N 3.32Å; N50-C52 PolarHBondContact OD1-N 2.92Å
51R88.3Confident87.7Confident215 Ų215103.6 Ų103.681%0.81150%0.499SS*.SBendtrans-81.6-15.1177.5-69.5151.2-75.2-138-5112.3
52C90Very high86.2Confident32 Ų32100.6 Ų100.622%0.21649%0.488CS..  trans-80.8117.9178-165.30000110.7V12 N50 V55V12-C52 WeakPolarHBondContact CG1-O 3.27Å; V12-C52 HydrophobicContact CG2-CB 4.05Å; V12-C52 WeakPolarHBondContact CG2-O 3.46Å; N50-C52 VanDerWaalsContact C-N 3.32Å; N50-C52 PolarHBondContact OD1-N 2.92Å; C52-V55 WeakPolarHBondContact SG-CG2 3.3Å
53I90.5Very high84.8Confident85 Ų85103.9 Ų103.944%0.43650%0.503SS..  trans-97.9-29.1-175.6-43.2-177.1000111.7V12 P26 L35V12-I53 WeakPolarHBondContact CG1-O 3.41Å; P26-I53 HydrophobicContact CB-CD1 4.21Å; P26-I53 HydrophobicContact CB-CG2 3.62Å; P26-I53 HydrophobicContact CG-CG2 3.47Å; P26-I53 VanDerWaalsContact CG-CG2 3.47Å; L35-I53 HydrophobicContact CD1-CD1 3.84Å; L35-I53 HydrophobicContact CD1-CG1 4.48Å; L35-I53 HydrophobicContact CD2-CD1 4.08Å; L35-I53 HydrophobicContact CD2-CG1 3.85Å
54Y90Very high83.5Confident175 Ų17599.4 Ų99.469%0.68648%0.479SS*.  trans-151.1134.3-176.6176.2-108.1000109.9N56Y54-N56 HydrophobicContact CE1-CB 3.79Å
55V89.2Confident82.3Confident38 Ų38101.2 Ų101.223%0.2349%0.49CS..  trans-130.4123.2172.5-178.60000107.3L9 V12 C52 R57L9-V55 HydrophobicContact CB-CG1 4.09Å; L9-V55 HydrophobicContact CB-CG2 4.21Å; L9-V55 HydrophobicContact CD1-CG1 4.09Å; L9-V55 HydrophobicContact CD2-CG2 4.32Å; V12-V55 HydrophobicContact CG2-CG2 3.76Å; C52-V55 WeakPolarHBondContact SG-CG2 3.3Å; V55-R57 HydrophobicContact CG1-CG 4.07Å
56N86Confident81.2Confident105 Ų10598.7 Ų98.756%0.56149%0.493SS*.  trans-104.2116.8168.5-171.519.4000109.3Y54Y54-N56 HydrophobicContact CE1-CB 3.79Å
57R82Confident80.2Confident114 Ų114103 Ų10343%0.4351%0.513SS..  trans-96.593.1174.6-65.8-179.9177.8-178.7-1.9108.7L9 V55 H59 E60L9-R57 PolarHBondContact O-NH2 3.36Å; V55-R57 HydrophobicContact CG1-CG 4.07Å; R57-H59 VanDerWaalsContact C-N 3.34Å; R57-E60 HydrophobicContact CB-CB 4.13Å; R57-E60 VanDerWaalsContact CD-OE1 3.23Å; R57-E60 WeakPolarHBondContact CD-OE1 2.67Å; R57-E60 IonicContact CZ-OE1 2.85Å; R57-E60 IonicContact NE-OE1 2.68Å; R57-E60 IonicContact NH1-OE1 3.95Å; R57-E60 PolarHBondContact NH1-OE1 2.84Å
58V80.7Confident79.4Confident109 Ų10999.6 Ų99.666%0.66149%0.492SS*.THydrogen-bonded Turntrans-65-40.5-178.3-176.60000111.4
59H74.1Confident78.8Confident180 Ų180102.8 Ų102.883%0.83351%0.507SS*.THydrogen-bonded Turntrans-115.880.1173.9-60.9-73.3000108.8R57 K61R57-H59 VanDerWaalsContact C-N 3.34Å; H59-K61 PolarHBondContact O-N 3.05Å
60E69.1Low78.4Confident119 Ų11998.5 Ų98.556%0.55649%0.485SS*.  trans-80.6116.6169.6-169.8151.1-132.100108.3R57 S62R57-E60 HydrophobicContact CB-CB 4.13Å; R57-E60 VanDerWaalsContact CD-OE1 3.23Å; R57-E60 WeakPolarHBondContact CD-OE1 2.67Å; R57-E60 IonicContact CZ-OE1 2.85Å; R57-E60 IonicContact NE-OE1 2.68Å; R57-E60 IonicContact NH1-OE1 3.95Å; R57-E60 PolarHBondContact NH1-OE1 2.84Å; E60-S62 VanDerWaalsContact C-N 3.26Å; E60-S62 PolarHBondContact O-N 3.06Å
61K63.3Low78.1Confident180 Ų180100.3 Ų100.378%0.78350%0.495SS*.  trans-66.799.3156.1-83.3-177.2176.9177.60105H59 D63H59-K61 PolarHBondContact O-N 3.05Å; K61-D63 PolarHBondContact O-N 3.11Å
62S63.6Low77.8Confident56 Ų5692.5 Ų92.539%0.39247%0.468SS..  trans-53.6125.916542.60000106.6E60 D64E60-S62 VanDerWaalsContact C-N 3.26Å; E60-S62 PolarHBondContact O-N 3.06Å; S62-D64 WeakPolarHBondContact CB-OD1 3.38Å; S62-D64 PolarHBondContact O-N 2.67Å; S62-D64 PolarHBondContact OG-OD1 3.07Å
63D68.2Low77.5Confident102 Ų10291.6 Ų91.655%0.54546%0.462SS..  trans-71.785.9162.8-170.75000105.3K61 L65 S66K61-D63 PolarHBondContact O-N 3.11Å; D63-L65 PolarHBondContact O-N 3.08Å; D63-L65 WeakPolarHBondContact OD1-CB 3.48Å; D63-S66 WeakPolarHBondContact O-CB 3.38Å; D63-S66 PolarHBondContact O-N 2.89Å; D63-S66 PolarHBondContact O-OG 3.22Å
64D67.5Low77.1Confident50 Ų5094.1 Ų94.127%0.26747%0.471SS..G310 helixtrans-54-29.3-175.6-69.1-23.7000110.4S62 Q67 I68 L113S62-D64 WeakPolarHBondContact CB-OD1 3.38Å; S62-D64 PolarHBondContact O-N 2.67Å; S62-D64 PolarHBondContact OG-OD1 3.07Å; D64-Q67 PolarHBondContact O-N 2.91Å; D64-I68 WeakPolarHBondContact O-CG1 3.42Å; D64-L113 HydrophobicContact CB-CD1 4.29Å
65L70.5Confident77Confident71 Ų7188.7 Ų88.737%0.37245%0.454SS..G310 helixtrans-58-48.9172.8-62.4172.2000110.8D63 Q67 I68 L113 M121D63-L65 PolarHBondContact O-N 3.08Å; D63-L65 WeakPolarHBondContact OD1-CB 3.48Å; L65-Q67 PolarHBondContact O-N 3Å; L65-I68 HydrophobicContact CD2-CD1 3.71Å; L65-I68 VanDerWaalsContact O-CB 3.3Å; L65-I68 WeakPolarHBondContact O-CB 3.19Å; L65-I68 WeakPolarHBondContact O-CG1 3.32Å; L65-I68 PolarHBondContact O-N 3.31Å; L65-L113 HydrophobicContact CD2-CD2 3.59Å; L65-L113 HydrophobicContact CG-CD2 4.34Å; L65-M121 WeakPolarHBondContact O-CE 3.41Å
66S73.1Confident76.9Confident83 Ų8392.6 Ų92.658%0.5848%0.48SS*.G310 helixtrans-57.1-18.8-17771.10000115.5D63D63-S66 WeakPolarHBondContact O-CB 3.38Å; D63-S66 PolarHBondContact O-N 2.89Å; D63-S66 PolarHBondContact O-OG 3.22Å
67Q72.3Confident77Confident148 Ų14893 Ų9369%0.69249%0.487SS*.G310 helixtrans-97.9-3.3179.1-63.1-173.2-14.400113.4D64 L65 N69D64-Q67 PolarHBondContact O-N 2.91Å; L65-Q67 PolarHBondContact O-N 3Å; Q67-N69 PolarHBondContact O-N 3.48Å
68I78.5Confident77.3Confident17 Ų1789.2 Ų89.29%0.08748%0.475CS..  trans-73125.9-179.8-62.7177.3000110D64 L65 F97 L113 V115 M121D64-I68 WeakPolarHBondContact O-CG1 3.42Å; L65-I68 HydrophobicContact CD2-CD1 3.71Å; L65-I68 VanDerWaalsContact O-CB 3.3Å; L65-I68 WeakPolarHBondContact O-CB 3.19Å; L65-I68 WeakPolarHBondContact O-CG1 3.32Å; L65-I68 PolarHBondContact O-N 3.31Å; I68-F97 HydrophobicContact CB-CZ 4.32Å; I68-F97 HydrophobicContact CD1-CE2 4.37Å; I68-F97 HydrophobicContact CD1-CZ 3.74Å; I68-F97 HydrophobicContact CG1-CE2 4.24Å; I68-F97 HydrophobicContact CG1-CZ 3.76Å; I68-F97 HydrophobicContact CG2-CE1 4.26Å; I68-F97 HydrophobicContact CG2-CZ 3.69Å; I68-L113 HydrophobicContact CD1-CB 4.09Å; I68-L113 HydrophobicContact CD1-CD1 4.32Å; I68-L113 HydrophobicContact CD1-CD2 4.03Å; I68-L113 HydrophobicContact CD1-CG 4.36Å; I68-V115 HydrophobicContact CD1-CG2 4.36Å; I68-V115 HydrophobicContact CG2-CG2 3.39Å; I68-M121 HydrophobicContact CB-CE 3.98Å
69N80.1Confident77.5Confident84 Ų8486.8 Ų86.845%0.44946%0.462SS..  trans-79.1122.9168.1-174.30.5000109.7Q67 D71 M72Q67-N69 PolarHBondContact O-N 3.48Å; N69-D71 PolarHBondContact O-N 3.5Å; N69-D71 WeakPolarHBondContact OD1-CB 3.47Å; N69-D71 PolarHBondContact OD1-N 2.84Å; N69-D71 PolarHBondContact OD1-OD2 3.16Å; N69-M72 HydrophobicContact CB-CG 4.24Å; N69-M72 WeakPolarHBondContact O-CB 3.4Å; N69-M72 VanDerWaalsContact O-CG 3.23Å; N69-M72 WeakPolarHBondContact O-CG 3.46Å; N69-M72 PolarHBondContact O-N 2.86Å
70T80.5Confident78.2Confident45 Ų4583.9 Ų83.928%0.27645%0.446SS..G310 helixtrans-64.1-24.1176.148.30000113.2M72 V73 M121T70-M72 PolarHBondContact O-N 3.3Å; T70-M72 VanDerWaalsContact O-N 3.12Å; T70-V73 WeakPolarHBondContact O-CG2 3.23Å; T70-V73 PolarHBondContact O-N 3.04Å; T70-M121 HydrophobicContact CG2-CG 3.6Å; T70-M121 HydrophobicContact CG2-SD 4.34Å
71D82.1Confident78.9Confident99 Ų9979.3 Ų79.353%0.52943%0.427SS..G310 helixtrans-68.5-11.3-179.8-59.2-26.7000112.7N69 V73 H74N69-D71 PolarHBondContact O-N 3.5Å; N69-D71 WeakPolarHBondContact OD1-CB 3.47Å; N69-D71 PolarHBondContact OD1-N 2.84Å; N69-D71 PolarHBondContact OD1-OD2 3.16Å; D71-V73 PolarHBondContact O-N 2.87Å; D71-V73 VanDerWaalsContact O-N 3.13Å; D71-H74 PolarHBondContact O-N 3.47Å; D71-H74 VanDerWaalsContact O-N 3.08Å
72M83.5Confident79.9Confident50 Ų5076.5 Ų76.525%0.24642%0.416CS..G310 helixtrans-59.8-21.6175.6-68.9-177.671.900113N69 T70 H74 D75 L78 F97N69-M72 HydrophobicContact CB-CG 4.24Å; N69-M72 WeakPolarHBondContact O-CB 3.4Å; N69-M72 VanDerWaalsContact O-CG 3.23Å; N69-M72 WeakPolarHBondContact O-CG 3.46Å; N69-M72 PolarHBondContact O-N 2.86Å; T70-M72 PolarHBondContact O-N 3.3Å; T70-M72 VanDerWaalsContact O-N 3.12Å; M72-H74 PolarHBondContact O-N 2.85Å; M72-H74 VanDerWaalsContact O-N 3.15Å; M72-D75 WeakPolarHBondContact O-CB 3.28Å; M72-D75 PolarHBondContact O-N 2.81Å; M72-D75 VanDerWaalsContact O-N 3.12Å; M72-L78 HydrophobicContact CB-CD1 3.97Å; M72-L78 HydrophobicContact CE-CD1 3.64Å; M72-F97 HydrophobicContact CE-CD1 3.81Å; M72-F97 HydrophobicContact CE-CD2 4.15Å; M72-F97 HydrophobicContact CE-CE1 3.97Å; M72-F97 HydrophobicContact CE-CE2 4.32Å; M72-F97 HydrophobicContact CE-CG 3.89Å; M72-F97 HydrophobicContact CE-CZ 4.23Å; M72-F97 HydrophobicContact SD-CE1 4.09Å; M72-F97 HydrophobicContact SD-CE2 4.47Å; M72-F97 HydrophobicContact SD-CZ 4.07Å
73V82.3Confident80.8Confident13 Ų1381.3 Ų81.38%0.07943%0.433CS..G310 helixtrans-60.3-25.3175.9-178.30000112.3T70 D71 V95 V115T70-V73 WeakPolarHBondContact O-CG2 3.23Å; T70-V73 PolarHBondContact O-N 3.04Å; D71-V73 PolarHBondContact O-N 2.87Å; D71-V73 VanDerWaalsContact O-N 3.13Å; V73-V95 HydrophobicContact CG1-CG2 4.41Å; V73-V115 HydrophobicContact CG2-CB 4.23Å; V73-V115 HydrophobicContact CG2-CG1 3.55Å
74H83.5Confident81.4Confident139 Ų13981.7 Ų81.764%0.64443%0.431SS*.G310 helixtrans-91.2-5.1-179-61.4-55.6000114.1D71 M72 P76D71-H74 PolarHBondContact O-N 3.47Å; D71-H74 VanDerWaalsContact O-N 3.08Å; M72-H74 PolarHBondContact O-N 2.85Å; M72-H74 VanDerWaalsContact O-N 3.15Å; H74-P76 VanDerWaalsContact O-CD 3.27Å; H74-P76 WeakPolarHBondContact O-CD 3.39Å
75D86.5Confident82Confident60 Ų6082.4 Ų82.432%0.32144%0.438SS..  trans-73.6114.1178.2-171.4-21.1000110.3M72 T77 L78M72-D75 WeakPolarHBondContact O-CB 3.28Å; M72-D75 PolarHBondContact O-N 2.81Å; M72-D75 VanDerWaalsContact O-N 3.12Å; D75-T77 VanDerWaalsContact CG-OG1 3.25Å; D75-T77 PolarHBondContact O-N 3.32Å; D75-T77 WeakPolarHBondContact OD1-CB 3.33Å; D75-T77 PolarHBondContact OD1-N 2.67Å; D75-T77 PolarHBondContact OD1-OG1 3Å; D75-T77 PolarHBondContact OD2-OG1 3.49Å; D75-L78 HydrophobicContact CB-CD1 3.9Å; D75-L78 HydrophobicContact CB-CG 3.97Å; D75-L78 PolarHBondContact O-N 3.49Å
76P87.4Confident82.5Confident120 Ų12079.2 Ų79.278%0.77942%0.422SS*.THydrogen-bonded Turntrans-69.8-11.9-179.130.5-35.7000113.3H74H74-P76 VanDerWaalsContact O-CD 3.27Å; H74-P76 WeakPolarHBondContact O-CD 3.39Å
77T88.6Confident82.9Confident115 Ų11579.7 Ų79.771%0.70642%0.423SS*.THydrogen-bonded Turntrans-85.8-13.9179.671.10000113D75D75-T77 VanDerWaalsContact CG-OG1 3.25Å; D75-T77 PolarHBondContact O-N 3.32Å; D75-T77 WeakPolarHBondContact OD1-CB 3.33Å; D75-T77 PolarHBondContact OD1-N 2.67Å; D75-T77 PolarHBondContact OD1-OG1 3Å; D75-T77 PolarHBondContact OD2-OG1 3.49Å
78L87.1Confident83.5Confident33 Ų3379.9 Ų79.917%0.17342%0.424CS..SBendtrans-87.8142.6179.8-64.3178.4000111.9M72 D75 V95M72-L78 HydrophobicContact CB-CD1 3.97Å; M72-L78 HydrophobicContact CE-CD1 3.64Å; D75-L78 HydrophobicContact CB-CD1 3.9Å; D75-L78 HydrophobicContact CB-CG 3.97Å; D75-L78 PolarHBondContact O-N 3.49Å; L78-V95 HydrophobicContact CB-CG1 3.36Å; L78-V95 HydrophobicContact CD1-CG1 3.68Å; L78-V95 HydrophobicContact CG-CG1 4.14Å
79P86.6Confident83.8Confident59 Ų5981.3 Ų81.338%0.38344%0.435SS..  trans-74.3137.9-17931.6-35.4000111.6V95 F96P79-V95 WeakPolarHBondContact O-CA 3.39Å; P79-F96 HydrophobicContact CB-CD1 4.45Å; P79-F96 HydrophobicContact CB-CE1 3.72Å; P79-F96 HydrophobicContact CB-CE2 3.9Å; P79-F96 HydrophobicContact CB-CZ 3.41Å; P79-F96 VanDerWaalsContact CB-CZ 3.41Å; P79-F96 HydrophobicContact CG-CD1 4.27Å; P79-F96 HydrophobicContact CG-CD2 3.79Å; P79-F96 HydrophobicContact CG-CE1 3.9Å; P79-F96 HydrophobicContact CG-CE2 3.37Å; P79-F96 HydrophobicContact CG-CG 4.23Å; P79-F96 HydrophobicContact CG-CZ 3.45Å; P79-F96 VanDerWaalsContact CG-CZ 3.45Å; P79-F96 WeakPolarHBondContact CG-O 3.31Å; P79-F96 PolarHBondContact O-N 3.01Å
80K86.9Confident83.8Confident118 Ų11884.6 Ų84.651%0.51345%0.445SS..EExtended strand (participates in β ladder)trans-106.3146.6179.6-62.4-175.7177.2-166.50110.8A94 V95K80-A94 CarbonylContact C-O 3.54Å; K80-A94 WeakPolarHBondContact CA-O 3.49Å; K80-V95 HydrophobicContact CG-CG2 4.11Å
81T83.9Confident83.9Confident24 Ų2487.8 Ų87.815%0.14746%0.457CS..EExtended strand (participates in β ladder)trans-134.5152.6172.3-176.10000110.6E83 A94 F96T81-E83 PolarHBondContact OG1-N 3.38Å; T81-E83 VanDerWaalsContact OG1-N 3.15Å; T81-A94 HydrophobicContact CG2-CB 4.35Å; T81-A94 PolarHBondContact N-O 3Å; T81-A94 PolarHBondContact O-N 2.91Å; T81-F96 HydrophobicContact CG2-CD1 4.01Å; T81-F96 HydrophobicContact CG2-CE1 4.44Å
82E85.3Confident83.8Confident121 Ų12190.7 Ų90.757%0.56546%0.461SS*.SBendtrans-107.9-3170.7-68.3-172.3-171.100113H84 R92E82-H84 VanDerWaalsContact C-N 3.28Å; E82-H84 PolarHBondContact O-N 3.44Å; E82-R92 VanDerWaalsContact CA-O 3.31Å; E82-R92 WeakPolarHBondContact CA-O 3.23Å; E82-R92 HydrophobicContact CB-CB 4.09Å; E82-R92 HydrophobicContact CG-CB 4.32Å
83E82.2Confident83.8Confident157 Ų15793 Ų9373%0.73447%0.471SS*.SBendtrans-75.2-18.5-172.1-63.7-179177.100113T81 P85T81-E83 PolarHBondContact OG1-N 3.38Å; T81-E83 VanDerWaalsContact OG1-N 3.15Å; E83-P85 WeakPolarHBondContact O-CD 3.41Å
84H80Confident83.9Confident109 Ų10992.5 Ų92.551%0.50547%0.468SS..SBendtrans-121.983.4-174.3-62.7-50.2000111.1E82E82-H84 VanDerWaalsContact C-N 3.28Å; E82-H84 PolarHBondContact O-N 3.44Å
85P80.9Confident83.9Confident66 Ų6686 Ų8643%0.42944%0.438SS..  trans-65.5141.1177.726.8-33.3000111.1E83 Q91 R92E83-P85 WeakPolarHBondContact O-CD 3.41Å; P85-Q91 CarbonylContact C-O 3.55Å; P85-Q91 VanDerWaalsContact CA-O 3.28Å; P85-Q91 WeakPolarHBondContact CA-O 3.27Å; P85-R92 HydrophobicContact CB-CG 4.39Å
86C81.4Confident83.8Confident4 Ų486.6 Ų86.63%0.02744%0.438CS..  trans-63.7133.6178.71700000111Q88 F90 Q91 S116 C122C86-Q88 PolarHBondContact O-N 3.41Å; C86-Q88 VanDerWaalsContact O-N 3.13Å; C86-Q88 PolarHBondContact SG-N 2.9Å; C86-Q88 VanDerWaalsContact SG-N 3.36Å; C86-F90 WeakPolarHBondContact O-CA 3.42Å; C86-F90 PolarHBondContact O-N 3.38Å; C86-Q91 PolarHBondContact N-O 2.76Å; C86-S116 VanDerWaalsContact CB-OG 3.24Å; C86-S116 WeakPolarHBondContact CB-OG 3.21Å; C86-C122 HydrophobicContact CB-CB 4.16Å; C86-C122 WeakPolarHBondContact CB-SG 3.24Å; C86-C122 WeakPolarHBondContact SG-CB 3.47Å; C86-C122 CovalentContact SG-SG 2.07Å; C86-C122 PolarHBondContact SG-SG 3.18Å
87P82Confident83.5Confident92 Ų9282.3 Ų82.360%0.59741%0.407SS*.THydrogen-bonded Turntrans-65.7-14.4-179.325.9-35.9000114.5
88Q83.7Confident83Confident153 Ų15384.4 Ų84.472%0.71541%0.409SS*.THydrogen-bonded Turntrans-94.5-47.9-179.7-65.8-69-56.300112.9C86C86-Q88 PolarHBondContact O-N 3.41Å; C86-Q88 VanDerWaalsContact O-N 3.13Å; C86-Q88 PolarHBondContact SG-N 2.9Å; C86-Q88 VanDerWaalsContact SG-N 3.36Å
89C85.1Confident82.3Confident47 Ų4785.4 Ų85.432%0.31842%0.419SS..THydrogen-bonded Turntrans-115.4-6.3-172.969.10000114.4Q91 C118C89-Q91 PolarHBondContact O-N 2.97Å; C89-C118 VanDerWaalsContact SG-SG 3.69Å
90F80.9Confident81.4Confident152 Ų15291.6 Ų91.667%0.66744%0.442SS*.  trans58.813.7-179.4-56.5-81.1000115.8C86C86-F90 WeakPolarHBondContact O-CA 3.42Å; C86-F90 PolarHBondContact O-N 3.38Å
91Q81.6Confident80.3Confident112 Ų11287.9 Ų87.952%0.52343%0.432SS..  trans-63.3135.8167.3-70.3-65-18.500109.4P85 C86 C89P85-Q91 CarbonylContact C-O 3.55Å; P85-Q91 VanDerWaalsContact CA-O 3.28Å; P85-Q91 WeakPolarHBondContact CA-O 3.27Å; C86-Q91 PolarHBondContact N-O 2.76Å; C89-Q91 PolarHBondContact O-N 2.97Å
92R81.3Confident79.2Confident161 Ų16193.7 Ų93.761%0.60847%0.467SS*.  trans-83.8-32.1-174.4-67.9-175.9-176.1178.8-0.1112.8E82 P85 A94E82-R92 VanDerWaalsContact CA-O 3.31Å; E82-R92 WeakPolarHBondContact CA-O 3.23Å; E82-R92 HydrophobicContact CB-CB 4.09Å; E82-R92 HydrophobicContact CG-CB 4.32Å; P85-R92 HydrophobicContact CB-CG 4.39Å; R92-A94 PolarHBondContact O-N 2.68Å
93E82.8Confident77.8Confident99 Ų9997.3 Ų97.346%0.46348%0.481SS..  trans-68116.8-179.1-72.1-168.4161.500111.5
94A83.2Confident76.3Confident2 Ų292.4 Ų92.42%0.01747%0.468CS..EExtended strand (participates in β ladder)trans-135.2144.4173.500000110.9K80 T81 R92 T114 V115K80-A94 CarbonylContact C-O 3.54Å; K80-A94 WeakPolarHBondContact CA-O 3.49Å; T81-A94 HydrophobicContact CG2-CB 4.35Å; T81-A94 PolarHBondContact N-O 3Å; T81-A94 PolarHBondContact O-N 2.91Å; R92-A94 PolarHBondContact O-N 2.68Å; A94-T114 HydrophobicContact CB-CG2 3.36Å; A94-V115 CarbonylContact C-O 3.56Å; A94-V115 WeakPolarHBondContact CA-O 3.42Å
95V85.5Confident74.8Confident2 Ų295.6 Ų95.61%0.01248%0.483CS..EExtended strand (participates in β ladder)trans-100.9136.4175178.80000108.4V73 L78 P79 K80 T114 V115V73-V95 HydrophobicContact CG1-CG2 4.41Å; L78-V95 HydrophobicContact CB-CG1 3.36Å; L78-V95 HydrophobicContact CD1-CG1 3.68Å; L78-V95 HydrophobicContact CG-CG1 4.14Å; P79-V95 WeakPolarHBondContact O-CA 3.39Å; K80-V95 HydrophobicContact CG-CG2 4.11Å; V95-T114 CarbonylContact O-C 3.59Å; V95-T114 VanDerWaalsContact O-CA 3.3Å; V95-T114 WeakPolarHBondContact O-CA 3.35Å; V95-V115 PolarHBondContact N-O 2.93Å; V95-V115 PolarHBondContact O-N 3.34Å
96F82.7Confident72.9Confident72 Ų7298.1 Ų98.132%0.31650%0.496SS..EExtended strand (participates in β ladder)trans-118.2143.9176.162.7-90.3000112.4P79 T81 L113P79-F96 HydrophobicContact CB-CD1 4.45Å; P79-F96 HydrophobicContact CB-CE1 3.72Å; P79-F96 HydrophobicContact CB-CE2 3.9Å; P79-F96 HydrophobicContact CB-CZ 3.41Å; P79-F96 VanDerWaalsContact CB-CZ 3.41Å; P79-F96 HydrophobicContact CG-CD1 4.27Å; P79-F96 HydrophobicContact CG-CD2 3.79Å; P79-F96 HydrophobicContact CG-CE1 3.9Å; P79-F96 HydrophobicContact CG-CE2 3.37Å; P79-F96 HydrophobicContact CG-CG 4.23Å; P79-F96 HydrophobicContact CG-CZ 3.45Å; P79-F96 VanDerWaalsContact CG-CZ 3.45Å; P79-F96 WeakPolarHBondContact CG-O 3.31Å; P79-F96 PolarHBondContact O-N 3.01Å; T81-F96 HydrophobicContact CG2-CD1 4.01Å; T81-F96 HydrophobicContact CG2-CE1 4.44Å; F96-L113 CarbonylContact C-O 3.52Å; F96-L113 WeakPolarHBondContact CA-O 3.5Å
97F81.8Confident71.1Confident30 Ų30106.4 Ų106.413%0.13253%0.527CS..EExtended strand (participates in β ladder)trans-149.2163.9177.157.3-87.6000111.4I68 M72 L113 V115I68-F97 HydrophobicContact CB-CZ 4.32Å; I68-F97 HydrophobicContact CD1-CE2 4.37Å; I68-F97 HydrophobicContact CD1-CZ 3.74Å; I68-F97 HydrophobicContact CG1-CE2 4.24Å; I68-F97 HydrophobicContact CG1-CZ 3.76Å; I68-F97 HydrophobicContact CG2-CE1 4.26Å; I68-F97 HydrophobicContact CG2-CZ 3.69Å; M72-F97 HydrophobicContact CE-CD1 3.81Å; M72-F97 HydrophobicContact CE-CD2 4.15Å; M72-F97 HydrophobicContact CE-CE1 3.97Å; M72-F97 HydrophobicContact CE-CE2 4.32Å; M72-F97 HydrophobicContact CE-CG 3.89Å; M72-F97 HydrophobicContact CE-CZ 4.23Å; M72-F97 HydrophobicContact SD-CE1 4.09Å; M72-F97 HydrophobicContact SD-CE2 4.47Å; M72-F97 HydrophobicContact SD-CZ 4.07Å; F97-L113 HydrophobicContact CD2-CB 4.3Å; F97-L113 HydrophobicContact CE1-CB 4.4Å; F97-L113 HydrophobicContact CE2-CB 3.87Å; F97-L113 HydrophobicContact CE2-CD1 3.93Å; F97-L113 HydrophobicContact CZ-CB 3.93Å; F97-L113 PolarHBondContact N-O 2.74Å; F97-L113 PolarHBondContact O-N 2.83Å; F97-V115 HydrophobicContact CE1-CG2 3.62Å; F97-V115 HydrophobicContact CZ-CG2 4.09Å
98Q77.5Confident68.9Low159 Ų159106.2 Ų106.274%0.74353%0.528SS*.  trans-93.8140.3171.5-67.9-178.2-18.100109.4Q100Q98-Q100 PolarHBondContact O-N 3.47Å
99S72.2Confident66.7Low54 Ų54108.6 Ų108.638%0.37854%0.536SS..  trans-62.9134.1174.760.60000109.9S101S99-S101 PolarHBondContact O-N 3.02Å
100Q67.7Low64.7Low189 Ų189110.6 Ų110.688%0.88355%0.551SS**  trans-8712.3179.7-60.8-172.422.200112.7Q98 T102Q98-Q100 PolarHBondContact O-N 3.47Å; Q100-T102 PolarHBondContact O-N 2.77Å
101S64.2Low63.4Low41 Ų41108.4 Ų108.429%0.28755%0.552SS.*  trans-71.9106-173.741.60000111S99 K103 A104S99-S101 PolarHBondContact O-N 3.02Å; S101-K103 PolarHBondContact O-N 2.97Å; S101-K103 VanDerWaalsContact O-N 3.11Å; S101-A104 WeakPolarHBondContact O-CB 3.48Å; S101-A104 PolarHBondContact O-N 2.82Å
102T61.5Low62.4Low145 Ų145106.2 Ų106.289%0.8955%0.549SS*.THydrogen-bonded Turntrans-62.8-15.417555.10000113.7Q100 A104Q100-T102 PolarHBondContact O-N 2.77Å; T102-A104 VanDerWaalsContact C-N 3.27Å; T102-A104 PolarHBondContact O-N 3.03Å
103K56.6Low61.7Low197 Ų19799.7 Ų99.786%0.85753%0.526SS*.THydrogen-bonded Turntrans-76.9-7.7174-78-174.8176.1-179.30114S101 E105S101-K103 PolarHBondContact O-N 2.97Å; S101-K103 VanDerWaalsContact O-N 3.11Å; K103-E105 PolarHBondContact O-N 3.43Å
104A50.4Low61.1Low55 Ų5597.1 Ų97.146%0.45552%0.517SS..  trans-73.482.8172.300000109S101 T102 V106S101-A104 WeakPolarHBondContact O-CB 3.48Å; S101-A104 PolarHBondContact O-N 2.82Å; T102-A104 VanDerWaalsContact C-N 3.27Å; T102-A104 PolarHBondContact O-N 3.03Å; A104-V106 VanDerWaalsContact C-N 3.35Å; A104-V106 PolarHBondContact O-N 3.05Å
105E47Very low60.5Low176 Ų17697 Ų9782%0.82252%0.517SS*.  trans-54.6102.7165-167.2170.6168.900108K103 R107K103-E105 PolarHBondContact O-N 3.43Å; E105-R107 PolarHBondContact O-N 2.89Å; E105-R107 VanDerWaalsContact O-N 3.16Å
106V41.9Very low59.8Low118 Ų11897.2 Ų97.272%0.71552%0.518SS*.  trans44.657.7161.9-160.10000113.7A104 S108A104-V106 VanDerWaalsContact C-N 3.35Å; A104-V106 PolarHBondContact O-N 3.05Å; V106-S108 WeakPolarHBondContact CG1-OG 3.31Å; V106-S108 PolarHBondContact O-N 3.49Å
107R43.3Very low59Low178 Ų17896 Ų9667%0.67252%0.518SS*.  trans-89.272.9154.1-81.7-175.4165.8-163.8-8.7109E105 F109E105-R107 PolarHBondContact O-N 2.89Å; E105-R107 VanDerWaalsContact O-N 3.16Å; R107-F109 PolarHBondContact O-N 2.89Å; R107-F109 VanDerWaalsContact O-N 3.08Å
108S35.4Very low58.2Low89 Ų8996 Ų9662%0.62252%0.522SS*.  trans-49113.3158.6-49.80000107.7V106V106-S108 WeakPolarHBondContact CG1-OG 3.31Å; V106-S108 PolarHBondContact O-N 3.49Å
109F37.7Very low57.3Low202 Ų20296.2 Ų96.289%0.88652%0.522SS*.SBendtrans6583.4171.1-65-96.1000116.9R107R107-F109 PolarHBondContact O-N 2.89Å; R107-F109 VanDerWaalsContact O-N 3.08Å
110S44Very low56.5Low90 Ų90103.4 Ų103.463%0.62954%0.541SS*.  trans167.3158.4142.442.50000113
111P52.7Low55.6Low106 Ų10698.6 Ų98.669%0.68852%0.52SS*.PPolyproline II helix-102.7160.5-53.933.5-19.7000110.3L113P111-L113 PolarHBondContact O-N 2.8Å
112S61.8Low54.9Low65 Ų6599 Ų9946%0.45552%0.522SS..PPolyproline II helixtrans-55.8121.9167-39.20000108.7
113L66.8Low54.5Low24 Ų2496.7 Ų96.713%0.12650%0.503CS..EExtended strand (participates in β ladder)trans-73.4131.4173.5-71154000107.2D64 L65 I68 F96 F97 P111D64-L113 HydrophobicContact CB-CD1 4.29Å; L65-L113 HydrophobicContact CD2-CD2 3.59Å; L65-L113 HydrophobicContact CG-CD2 4.34Å; I68-L113 HydrophobicContact CD1-CB 4.09Å; I68-L113 HydrophobicContact CD1-CD1 4.32Å; I68-L113 HydrophobicContact CD1-CD2 4.03Å; I68-L113 HydrophobicContact CD1-CG 4.36Å; F96-L113 CarbonylContact C-O 3.52Å; F96-L113 WeakPolarHBondContact CA-O 3.5Å; F97-L113 HydrophobicContact CD2-CB 4.3Å; F97-L113 HydrophobicContact CE1-CB 4.4Å; F97-L113 HydrophobicContact CE2-CB 3.87Å; F97-L113 HydrophobicContact CE2-CD1 3.93Å; F97-L113 HydrophobicContact CZ-CB 3.93Å; F97-L113 PolarHBondContact N-O 2.74Å; F97-L113 PolarHBondContact O-N 2.83Å; P111-L113 PolarHBondContact O-N 2.8Å
114T68.9Low54.4Low45 Ų4591.4 Ų91.428%0.27649%0.485SS..EExtended strand (participates in β ladder)trans-116.8122.8-173.4-60.50000109.5A94 V95A94-T114 HydrophobicContact CB-CG2 3.36Å; V95-T114 CarbonylContact O-C 3.59Å; V95-T114 VanDerWaalsContact O-CA 3.3Å; V95-T114 WeakPolarHBondContact O-CA 3.35Å
115V71.4Confident54.7Low1 Ų193.4 Ų93.41%0.00649%0.487CS..EExtended strand (participates in β ladder)trans-116.7127.6176.5-1770000108.5I68 V73 A94 V95 F97I68-V115 HydrophobicContact CD1-CG2 4.36Å; I68-V115 HydrophobicContact CG2-CG2 3.39Å; V73-V115 HydrophobicContact CG2-CB 4.23Å; V73-V115 HydrophobicContact CG2-CG1 3.55Å; A94-V115 CarbonylContact C-O 3.56Å; A94-V115 WeakPolarHBondContact CA-O 3.42Å; V95-V115 PolarHBondContact N-O 2.93Å; V95-V115 PolarHBondContact O-N 3.34Å; F97-V115 HydrophobicContact CE1-CG2 3.62Å; F97-V115 HydrophobicContact CZ-CG2 4.09Å
116S71.1Confident55.1Low5 Ų588.5 Ų88.54%0.03547%0.467CS..EExtended strand (participates in β ladder)trans-101162.6175740000111.5C86 C118 C122C86-S116 VanDerWaalsContact CB-OG 3.24Å; C86-S116 WeakPolarHBondContact CB-OG 3.21Å; S116-C118 PolarHBondContact O-N 3.45Å; S116-C118 VanDerWaalsContact O-O 3.13Å; S116-C122 PolarHBondContact OG-SG 3.07Å
117S65.7Low55.9Low46 Ų4686.7 Ų86.732%0.32245%0.451SS..SBendtrans-63.3-1.6177.856.50000115.3H119S117-H119 PolarHBondContact O-N 2.85Å
118C65.3Low56.8Low32 Ų3280.6 Ų80.622%0.21644%0.437CS..SBendtrans-61121.8163.9-152.10000107.5C89 S116 R120C89-C118 VanDerWaalsContact SG-SG 3.69Å; S116-C118 PolarHBondContact O-N 3.45Å; S116-C118 VanDerWaalsContact O-O 3.13Å; C118-R120 CarbonylContact O-C 3.59Å; C118-R120 PolarHBondContact O-N 3.26Å; C118-R120 VanDerWaalsContact O-O 3.11Å
119H58.7Low58.3Low162 Ų16280 Ų8075%0.7542%0.423SS*.SBendtrans-62.720.2175.4-91.458.8000113.9S117S117-H119 PolarHBondContact O-N 2.85Å
120R53.7Low59.9Low206 Ų20670.6 Ų70.678%0.77739%0.388SS*.SBendtrans-135.8130.2172.5-74-177.7173.6-114.9-2.5107.3C118 C122C118-R120 CarbonylContact O-C 3.59Å; C118-R120 PolarHBondContact O-N 3.26Å; C118-R120 VanDerWaalsContact O-O 3.11Å; R120-C122 PolarHBondContact O-N 3.4Å
121M50Low61.2Low87 Ų8769 Ų6943%0.42937%0.368SS..  trans-56111.4-179.8-62.9147.982.600109.2L65 I68 T70L65-M121 WeakPolarHBondContact O-CE 3.41Å; I68-M121 HydrophobicContact CB-CE 3.98Å; T70-M121 HydrophobicContact CG2-CG 3.6Å; T70-M121 HydrophobicContact CG2-SD 4.34Å
122C48.6Very low62Low49 Ų4965.6 Ų65.633%0.33134%0.338SS..  trans-83.40152.5-30.60000105.7C86 S116 R120C86-C122 HydrophobicContact CB-CB 4.16Å; C86-C122 WeakPolarHBondContact CB-SG 3.24Å; C86-C122 WeakPolarHBondContact SG-CB 3.47Å; C86-C122 CovalentContact SG-SG 2.07Å; C86-C122 PolarHBondContact SG-SG 3.18Å; S116-C122 PolarHBondContact OG-SG 3.07Å; R120-C122 PolarHBondContact O-N 3.4Å

Retrieved 122 of 122 residues in 55.1 ms (Link to these results)