A0A078BTI5_CAEEL Loading...

Phosphatidate cytidylyltransferase, mitochondrial

AlphaFold DB , UniProt , Accession A0A078BTI5, Species CAEEL (Caenorhabditis elegans), Gene n/a, Length 42 aa.

						>A0A078BTI5_CAEEL|A0A078BTI5
MMWLRPLKPQSAESSDQSPCLKPRRTPSRPESPVQSSTVWQR
					

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(Predicted Aligned Error values between residue pairs)

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Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	61.9	Low	69	Low	217 Å²	217	176.5 Å²	176.5	100%	1.069	87%	0.872	S	S	*	*				0	122.8	0	-82.4	158.7	160.6	0	0	108.2
2	M	69.5	Low	68.5	Low	189 Å²	189	169.7 Å²	169.7	93%	0.931	86%	0.864	S	S	*	*			trans	-97.5	119.3	175	-62.4	-170.3	-108.4	0	0	108.1	L4	M2-L4 PolarHBondContact O-N 3.31Å
3	W	71	Confident	67.8	Low	229 Å²	229	169.1 Å²	169.1	87%	0.867	86%	0.855	S	S	*	*			trans	-84.3	110.1	177	-62.2	99.3	0	0	0	109	R5	W3-R5 PolarHBondContact O-N 2.94Å
4	L	77.5	Confident	67.2	Low	171 Å²	171	164.1 Å²	164.1	90%	0.895	84%	0.844	S	S	*	*	P	Polyproline II helix	trans	-72.4	123.8	169.8	-69.1	169.9	0	0	0	108.3	M2	M2-L4 PolarHBondContact O-N 3.31Å
5	R	76.1	Confident	66.6	Low	229 Å²	229	157.9 Å²	157.9	86%	0.864	82%	0.821	S	S	*	*	P	Polyproline II helix	trans	-74.4	141.8	174.8	-59	-173.2	-154.9	172.8	7.1	109.2	W3 L7	W3-R5 PolarHBondContact O-N 2.94Å; R5-L7 PolarHBondContact O-N 3.38Å
6	P	70.1	Confident	66.3	Low	126 Å²	126	156.4 Å²	156.4	82%	0.818	82%	0.815	S	S	*	*	P	Polyproline II helix	trans	-61.6	126	172.9	-13.9	26.4	0	0	0	109.3	K8	P6-K8 PolarHBondContact O-N 2.8Å
7	L	74.5	Confident	66	Low	170 Å²	170	157.2 Å²	157.2	89%	0.89	81%	0.813	S	S	*	*	P	Polyproline II helix	trans	-65	125.6	166.8	-68.4	170.8	0	0	0	107.1	R5	R5-L7 PolarHBondContact O-N 3.38Å
8	K	71.9	Confident	65.9	Low	194 Å²	194	153.1 Å²	153.1	84%	0.843	80%	0.8	S	S	*	*	P	Polyproline II helix	trans	-55.4	131.8	179.2	-151.4	175.8	-176.2	172.5	0	107.8	P6 Q10	P6-K8 PolarHBondContact O-N 2.8Å; K8-Q10 PolarHBondContact O-N 2.94Å
9	P	63.3	Low	65.9	Low	116 Å²	116	150 Å²	150	75%	0.753	79%	0.791	S	S	*	*	P	Polyproline II helix	trans	-60.1	123.1	174.3	25.1	-30.9	0	0	0	106.5	S11	P9-S11 PolarHBondContact O-N 2.98Å
10	Q	63.2	Low	66	Low	194 Å²	194	149 Å²	149	91%	0.907	80%	0.795	S	S	*	*			trans	-61.2	93.9	168.3	-172.5	166.2	17.4	0	0	104.9	K8 A12	K8-Q10 PolarHBondContact O-N 2.94Å; Q10-A12 VanDerWaalsContact C-N 3.33Å; Q10-A12 PolarHBondContact O-N 2.83Å
11	S	60.3	Low	66.1	Low	107 Å²	107	149 Å²	149	75%	0.748	79%	0.794	S	S	*	*			trans	-55	109.1	172.9	-154.7	0	0	0	0	104	P9 E13	P9-S11 PolarHBondContact O-N 2.98Å; S11-E13 PolarHBondContact O-N 2.76Å
12	A	63.1	Low	66.6	Low	94 Å²	94	147.5 Å²	147.5	78%	0.777	78%	0.782	S	S	*	*			trans	-64.1	81.7	170.2	0	0	0	0	0	105.2	Q10 S14	Q10-A12 VanDerWaalsContact C-N 3.33Å; Q10-A12 PolarHBondContact O-N 2.83Å; A12-S14 PolarHBondContact O-N 2.86Å
13	E	58.5	Low	66.6	Low	162 Å²	162	144.5 Å²	144.5	76%	0.757	78%	0.776	S	S	*	*			trans	-68.5	73.1	158.8	-161.7	176.7	98.9	0	0	104.2	S11 S15	S11-E13 PolarHBondContact O-N 2.76Å; E13-S15 PolarHBondContact O-N 2.83Å
14	S	59.3	Low	66.5	Low	99 Å²	99	144.2 Å²	144.2	69%	0.692	78%	0.775	S	S	*	*			trans	-60.9	86.2	149.8	-161.5	0	0	0	0	102.8	A12 D16	A12-S14 PolarHBondContact O-N 2.86Å; S14-D16 PolarHBondContact O-N 2.73Å
15	S	58.1	Low	66.1	Low	72 Å²	72	147.4 Å²	147.4	50%	0.503	78%	0.775	S	S	.	*			trans	-58.9	84	160.7	-90.8	0	0	0	0	104.2	E13 Q17	E13-S15 PolarHBondContact O-N 2.83Å; S15-Q17 PolarHBondContact O-N 2.83Å
16	D	62.7	Low	65.9	Low	134 Å²	134	141.5 Å²	141.5	72%	0.717	77%	0.765	S	S	*	*			trans	-66.4	63.4	155.5	-147.7	-74.4	0	0	0	105.3	S14 S18	S14-D16 PolarHBondContact O-N 2.73Å; D16-S18 PolarHBondContact O-N 2.8Å
17	Q	61.4	Low	65.5	Low	169 Å²	169	140.6 Å²	140.6	79%	0.79	76%	0.759	S	S	*	*			trans	-71.5	70.2	157.1	-78.9	-158.7	4	0	0	105	S15 P19	S15-Q17 PolarHBondContact O-N 2.83Å; Q17-P19 WeakPolarHBondContact O-CD 3.48Å; Q17-P19 VanDerWaalsContact O-N 3.08Å
18	S	64.4	Low	65.1	Low	83 Å²	83	137.8 Å²	137.8	58%	0.58	75%	0.754	S	S	*	*			trans	-45.7	117.8	161.5	-172.6	0	0	0	0	105.6	D16 C20	D16-S18 PolarHBondContact O-N 2.8Å; S18-C20 PolarHBondContact O-N 2.93Å
19	P	64.6	Low	64.7	Low	95 Å²	95	139 Å²	139	62%	0.617	75%	0.753	S	S	*	*			trans	-58.5	118.4	-179.3	22.2	-30.8	0	0	0	106.4	Q17 L21	Q17-P19 WeakPolarHBondContact O-CD 3.48Å; Q17-P19 VanDerWaalsContact O-N 3.08Å; P19-L21 HydrophobicContact CB-CD2 4.4Å; P19-L21 PolarHBondContact O-N 2.82Å
20	C	68.8	Low	64.6	Low	129 Å²	129	138.8 Å²	138.8	87%	0.872	75%	0.751	S	S	*	*			trans	-62.2	84.9	169.2	-92.7	0	0	0	0	107.3	S18 K22	S18-C20 PolarHBondContact O-N 2.93Å; C20-K22 VanDerWaalsContact C-N 3.33Å; C20-K22 PolarHBondContact O-N 2.69Å
21	L	68.8	Low	64.7	Low	150 Å²	150	138.4 Å²	138.4	79%	0.785	75%	0.75	S	S	*	*			trans	-65.7	100	172.4	-65.6	-180	0	0	0	105.7	P19	P19-L21 HydrophobicContact CB-CD2 4.4Å; P19-L21 PolarHBondContact O-N 2.82Å
22	K	71.4	Confident	64.6	Low	186 Å²	186	137.6 Å²	137.6	81%	0.809	74%	0.744	S	S	*	*			trans	-50.5	134.4	170.3	-69.8	176.2	179.6	174	0	107.3	C20 R24	C20-K22 VanDerWaalsContact C-N 3.33Å; C20-K22 PolarHBondContact O-N 2.69Å; K22-R24 PolarHBondContact O-N 2.9Å
23	P	70	Confident	64.6	Low	126 Å²	126	138.3 Å²	138.3	82%	0.818	74%	0.74	S	S	*	*			trans	-52.8	116.5	170.4	-22.1	31.3	0	0	0	107.4	R25	P23-R25 VanDerWaalsContact C-N 3.27Å; P23-R25 PolarHBondContact O-N 2.94Å
24	R	69.6	Low	65	Low	223 Å²	223	136.2 Å²	136.2	84%	0.842	74%	0.739	S	S	*	*			trans	-63.5	98.4	174.9	-176.1	175.1	178.7	-124.2	2.7	105.4	K22 T26	K22-R24 PolarHBondContact O-N 2.9Å; R24-T26 VanDerWaalsContact C-N 3.31Å; R24-T26 PolarHBondContact O-N 2.84Å
25	R	68.1	Low	65.2	Low	238 Å²	238	140.1 Å²	140.1	90%	0.898	75%	0.746	S	S	*	*			trans	-57	104.1	173.1	-152.6	172.4	-179	165.7	-0.6	104.4	P23	P23-R25 VanDerWaalsContact C-N 3.27Å; P23-R25 PolarHBondContact O-N 2.94Å
26	T	71.5	Confident	65.3	Low	104 Å²	104	141.7 Å²	141.7	64%	0.638	76%	0.757	S	S	*	*			trans	-50.8	130.2	174.9	43.4	0	0	0	0	105.9	R24 S28	R24-T26 VanDerWaalsContact C-N 3.31Å; R24-T26 PolarHBondContact O-N 2.84Å; T26-S28 VanDerWaalsContact C-N 3.33Å; T26-S28 PolarHBondContact O-N 2.77Å
27	P	61.4	Low	65.2	Low	107 Å²	107	139.9 Å²	139.9	70%	0.695	76%	0.755	S	S	*	*			trans	-56.6	111.5	168.1	23.2	-28.9	0	0	0	104.7	R29	P27-R29 VanDerWaalsContact C-N 3.34Å; P27-R29 PolarHBondContact O-N 2.73Å
28	S	66.3	Low	65.4	Low	112 Å²	112	137.7 Å²	137.7	78%	0.783	75%	0.753	S	S	*	*			trans	-50.4	112.8	167.3	-61.5	0	0	0	0	103.9	T26 P30	T26-S28 VanDerWaalsContact C-N 3.33Å; T26-S28 PolarHBondContact O-N 2.77Å; S28-P30 VanDerWaalsContact O-N 3.14Å
29	R	63.8	Low	65.3	Low	219 Å²	219	139 Å²	139	83%	0.826	76%	0.757	S	S	*	*			trans	-37.4	125.9	175	173.2	177.4	170.5	176.9	-2.9	106.2	P27 E31	P27-R29 VanDerWaalsContact C-N 3.34Å; P27-R29 PolarHBondContact O-N 2.73Å; R29-E31 PolarHBondContact O-N 2.86Å
30	P	60.6	Low	65.3	Low	111 Å²	111	146 Å²	146	72%	0.721	77%	0.771	S	S	*	*			trans	-56	115.1	173	23.6	-29.5	0	0	0	104.1	S28 S32	S28-P30 VanDerWaalsContact O-N 3.14Å; P30-S32 PolarHBondContact O-N 2.78Å
31	E	65.8	Low	65	Low	187 Å²	187	147.8 Å²	147.8	87%	0.874	77%	0.767	S	S	*	*			trans	-59.8	94.9	161.2	-79.3	-157.3	90	0	0	103.3	R29 P33	R29-E31 PolarHBondContact O-N 2.86Å; E31-P33 WeakPolarHBondContact O-CD 3.41Å; E31-P33 VanDerWaalsContact O-N 3.1Å
32	S	57.8	Low	64.5	Low	90 Å²	90	155.9 Å²	155.9	63%	0.629	79%	0.787	S	S	*	*			trans	-51.1	121.1	169.7	177.9	0	0	0	0	104.2	P30 V34	P30-S32 PolarHBondContact O-N 2.78Å; S32-V34 PolarHBondContact O-N 2.78Å; S32-V34 VanDerWaalsContact C-N 3.34Å
33	P	62.8	Low	64.2	Low	108 Å²	108	154.4 Å²	154.4	70%	0.701	79%	0.786	S	S	*	*			trans	-57.8	111.1	172.4	23.3	-30.1	0	0	0	104.6	E31 Q35	E31-P33 WeakPolarHBondContact O-CD 3.41Å; E31-P33 VanDerWaalsContact O-N 3.1Å; P33-Q35 PolarHBondContact O-N 2.7Å
34	V	68.1	Low	63.9	Low	119 Å²	119	155.8 Å²	155.8	72%	0.721	78%	0.784	S	S	*	*			trans	-61	100	175.2	177	0	0	0	0	104.4	S32 S36	S32-V34 PolarHBondContact O-N 2.78Å; S32-V34 VanDerWaalsContact C-N 3.34Å; V34-S36 WeakPolarHBondContact CG1-OG 3.42Å; V34-S36 PolarHBondContact O-N 2.78Å
35	Q	64.1	Low	63.6	Low	180 Å²	180	152.1 Å²	152.1	84%	0.841	78%	0.781	S	S	*	*			trans	-68.5	76	164.5	-72.6	-168.4	-34.9	0	0	105.9	P33 S37	P33-Q35 PolarHBondContact O-N 2.7Å; Q35-S37 PolarHBondContact O-N 3.06Å
36	S	60.1	Low	63.3	Low	106 Å²	106	147.1 Å²	147.1	74%	0.741	77%	0.774	S	S	*	*			trans	-70.8	94.7	162.7	-84	0	0	0	0	105.6	V34 T38	V34-S36 WeakPolarHBondContact CG1-OG 3.42Å; V34-S36 PolarHBondContact O-N 2.78Å; S36-T38 PolarHBondContact O-N 3.32Å
37	S	59	Low	62.8	Low	96 Å²	96	149.8 Å²	149.8	67%	0.671	78%	0.783	S	S	*	*			trans	-37.5	127.8	175.6	-67.7	0	0	0	0	111.6	Q35 V39	Q35-S37 PolarHBondContact O-N 3.06Å; S37-V39 WeakPolarHBondContact O-CG2 3.46Å; S37-V39 PolarHBondContact O-N 3.26Å
38	T	67.1	Low	62.9	Low	123 Å²	123	152.6 Å²	152.6	76%	0.755	79%	0.789	S	S	*	*			trans	-34.3	106	155.4	-51.6	0	0	0	0	110.7	S36	S36-T38 PolarHBondContact O-N 3.32Å
39	V	62.4	Low	62.7	Low	109 Å²	109	155.5 Å²	155.5	66%	0.661	79%	0.789	S	S	*	*			trans	-129.5	76.8	158.3	-151.7	0	0	0	0	107.1	S37 Q41	S37-V39 WeakPolarHBondContact O-CG2 3.46Å; S37-V39 PolarHBondContact O-N 3.26Å; V39-Q41 HydrophobicContact CB-CG 4.46Å; V39-Q41 HydrophobicContact CG1-CG 3.53Å; V39-Q41 PolarHBondContact O-N 3.47Å
40	W	63.7	Low	62.6	Low	242 Å²	242	150.6 Å²	150.6	92%	0.917	79%	0.786	S	S	*	*			trans	-67.8	90.1	154.8	-66.8	95.9	0	0	0	105.6	R42	W40-R42 PolarHBondContact O-N 3.47Å
41	Q	63.1	Low	62.7	Low	168 Å²	168	153.9 Å²	153.9	79%	0.785	79%	0.792	S	S	*	*			trans	-70.7	116	169.4	-75.4	-155.4	75.2	0	0	108	V39	V39-Q41 HydrophobicContact CB-CG 4.46Å; V39-Q41 HydrophobicContact CG1-CG 3.53Å; V39-Q41 PolarHBondContact O-N 3.47Å
42	R	59.1	Low	62.5	Low	319 Å²	319	150.9 Å²	150.9	100%	1.204	78%	0.784	S	S	*	*			trans	27.2	0	161.9	-74.4	-174.3	-129.1	-170.2	1.6	118.8	W40	W40-R42 PolarHBondContact O-N 3.47Å

Retrieved 42 of 42 residues in 43.4 ms (Link to these results)

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