A0A087WNQ4_MOUSE Loading...

High density lipoprotein (HDL) binding protein

AlphaFold DB , UniProt , Accession A0A087WNQ4, Species MOUSE (Mus musculus, Mouse), Gene Hdlbp, Length 22 aa.

						>A0A087WNQ4_MOUSE|A0A087WNQ4|Hdlbp
MQETGTRINIPPPSVNRTEIVF
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	72	Confident	81.9	Confident	236 Å²	236	153.7 Å²	153.7	100%	1.163	81%	0.811	S	S	*	*				0	125.4	0	-55.6	173.2	-169	0	0	105.8
2	Q	78.4	Confident	82.2	Confident	193 Å²	193	150.1 Å²	150.1	90%	0.902	80%	0.803	S	S	*	*			trans	-91.4	107.1	176	-66.3	-169.5	97.8	0	0	106.9	T4	Q2-T4 PolarHBondContact O-N 2.97Å
3	E	79	Confident	82.3	Confident	196 Å²	196	147.3 Å²	147.3	92%	0.916	80%	0.798	S	S	*	*			trans	-68.8	97.8	179.4	-65.2	178.3	96.5	0	0	108.9	G5	E3-G5 PolarHBondContact O-N 3.19Å
4	T	81.7	Confident	82.4	Confident	131 Å²	131	145.3 Å²	145.3	80%	0.804	80%	0.801	S	S	*	*			trans	-76.9	102.6	172.2	-67.7	0	0	0	0	107.9	Q2	Q2-T4 PolarHBondContact O-N 2.97Å
5	G	82.9	Confident	82.2	Confident	63 Å²	63	143.3 Å²	143.3	65%	0.649	79%	0.794	S	S	*	*			trans	-68.6	133.1	171	0	0	0	0	0	111.3	E3 R7	E3-G5 PolarHBondContact O-N 3.19Å; G5-R7 PolarHBondContact O-N 3.38Å
6	T	83.6	Confident	81.9	Confident	125 Å²	125	142.9 Å²	142.9	77%	0.767	79%	0.79	S	S	*	*			trans	-72.9	117.4	172.7	-64.7	0	0	0	0	109.7	I8	T6-I8 HydrophobicContact CG2-CG1 4.28Å; T6-I8 PolarHBondContact O-N 3.4Å
7	R	84.9	Confident	81.4	Confident	214 Å²	214	146.8 Å²	146.8	81%	0.808	79%	0.79	S	S	*	*			trans	-79.3	112.3	172.6	-64.5	177	69.8	-128.5	1.1	109	G5	G5-R7 PolarHBondContact O-N 3.38Å
8	I	86.6	Confident	81.2	Confident	136 Å²	136	144.7 Å²	144.7	70%	0.697	78%	0.783	S	S	*	*			trans	-92	119.7	177.2	-55.9	175	0	0	0	108.7	T6 I10	T6-I8 HydrophobicContact CG2-CG1 4.28Å; T6-I8 PolarHBondContact O-N 3.4Å; I8-I10 HydrophobicContact CG2-CG2 4.14Å; I8-I10 PolarHBondContact O-N 3.39Å
9	N	84.6	Confident	81	Confident	139 Å²	139	145.9 Å²	145.9	74%	0.743	78%	0.783	S	S	*	*			trans	-87.8	97.3	173.1	-57.8	-54.5	0	0	0	108.7
10	I	84.9	Confident	80.7	Confident	149 Å²	149	145.1 Å²	145.1	76%	0.764	78%	0.777	S	S	*	*	P	Polyproline II helix	trans	-81.7	121.6	170.9	47.9	169.8	0	0	0	109.3	I8	I8-I10 HydrophobicContact CG2-CG2 4.14Å; I8-I10 PolarHBondContact O-N 3.39Å
11	P	82.8	Confident	80.1	Confident	109 Å²	109	144.4 Å²	144.4	71%	0.708	78%	0.778	S	S	*	*	P	Polyproline II helix	trans	-64.4	149.4	171.6	28.6	-33.2	0	0	0	109.2
12	P	84.5	Confident	80	Confident	110 Å²	110	145.3 Å²	145.3	71%	0.714	78%	0.776	S	S	*	*	P	Polyproline II helix	trans	-58.2	149.5	174.4	26.2	-33.6	0	0	0	110	S14	P12-S14 PolarHBondContact O-N 3.24Å
13	P	83.9	Confident	80.1	Confident	114 Å²	114	143 Å²	143	74%	0.74	77%	0.77	S	S	*	*	P	Polyproline II helix	trans	-57.1	128.9	175.4	25	-33.3	0	0	0	109.2	V15	P13-V15 PolarHBondContact O-N 2.98Å
14	S	83.5	Confident	80.2	Confident	119 Å²	119	140.2 Å²	140.2	83%	0.832	76%	0.762	S	S	*	*			trans	-61	108.1	173.3	-62.9	0	0	0	0	108.6	P12 N16	P12-S14 PolarHBondContact O-N 3.24Å; S14-N16 VanDerWaalsContact C-N 3.3Å; S14-N16 PolarHBondContact O-N 2.94Å
15	V	79.7	Confident	80.1	Confident	115 Å²	115	140.7 Å²	140.7	70%	0.697	76%	0.76	S	S	*	*			trans	-72.3	93.5	172	-175.2	0	0	0	0	106.6	P13 R17	P13-V15 PolarHBondContact O-N 2.98Å; V15-R17 VanDerWaalsContact C-N 3.26Å; V15-R17 PolarHBondContact O-N 2.93Å; V15-R17 HydrophobicContact CG1-CG 3.82Å
16	N	78.1	Confident	79.9	Confident	138 Å²	138	145.2 Å²	145.2	74%	0.738	77%	0.766	S	S	*	*			trans	-68.9	93.1	167.4	-168.4	-24.2	0	0	0	107	S14 T18	S14-N16 VanDerWaalsContact C-N 3.3Å; S14-N16 PolarHBondContact O-N 2.94Å; N16-T18 VanDerWaalsContact C-N 3.25Å; N16-T18 PolarHBondContact O-N 2.92Å
17	R	72.5	Confident	79.7	Confident	209 Å²	209	146.5 Å²	146.5	79%	0.789	77%	0.766	S	S	*	*			trans	-74.7	88	169.8	-69.6	-175.9	179.4	167.8	-0.5	106.7	V15 E19	V15-R17 VanDerWaalsContact C-N 3.26Å; V15-R17 PolarHBondContact O-N 2.93Å; V15-R17 HydrophobicContact CG1-CG 3.82Å; R17-E19 PolarHBondContact O-N 3.02Å
18	T	78.3	Confident	79.4	Confident	108 Å²	108	142 Å²	142	66%	0.663	76%	0.763	S	S	*	*			trans	-65.1	95.7	159.1	-55.2	0	0	0	0	106.2	N16 I20	N16-T18 VanDerWaalsContact C-N 3.25Å; N16-T18 PolarHBondContact O-N 2.92Å; T18-I20 PolarHBondContact O-N 2.99Å
19	E	77.3	Confident	78.9	Confident	168 Å²	168	142.4 Å²	142.4	79%	0.785	77%	0.768	S	S	*	*			trans	-62.2	105.1	167.6	-74.6	-172.4	88.1	0	0	107.3	R17 V21	R17-E19 PolarHBondContact O-N 3.02Å; E19-V21 VanDerWaalsContact C-N 3.31Å; E19-V21 PolarHBondContact O-N 3.04Å
20	I	74.8	Confident	78.4	Confident	130 Å²	130	142.7 Å²	142.7	67%	0.667	77%	0.77	S	S	*	*			trans	-72.6	97.3	166.5	-62.3	166.9	0	0	0	105.2	T18 F22	T18-I20 PolarHBondContact O-N 2.99Å; I20-F22 HydrophobicContact CG2-CE2 4.46Å; I20-F22 HydrophobicContact CG2-CZ 4.35Å; I20-F22 PolarHBondContact O-N 3.41Å
21	V	68.1	Low	77.9	Confident	130 Å²	130	142.2 Å²	142.2	79%	0.788	77%	0.77	S	S	*	*			trans	-74.5	116.1	170.6	-172.4	0	0	0	0	106.7	E19	E19-V21 VanDerWaalsContact C-N 3.31Å; E19-V21 PolarHBondContact O-N 3.04Å
22	F	71.2	Confident	77.4	Confident	256 Å²	256	145.2 Å²	145.2	100%	1.123	78%	0.776	S	S	*	*			trans	-78.4	0	171.1	-69.2	-81.7	0	0	0	111	I20	I20-F22 HydrophobicContact CG2-CE2 4.46Å; I20-F22 HydrophobicContact CG2-CZ 4.35Å; I20-F22 PolarHBondContact O-N 3.41Å

Retrieved 22 of 22 residues in 18 ms (Link to these results)

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