A0A087WP25_MOUSE Loading...

Apical junction component 1

AlphaFold DB , UniProt , Accession A0A087WP25, Species MOUSE (Mus musculus, Mouse), Gene Ajm1, Length 29 aa.

						>A0A087WP25_MOUSE|A0A087WP25|Ajm1
MTRTDPPDLLVSTVYQDIKVVDPGLTSKR
					

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(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	45.9	Very low	58.8	Low	239 Å²	239	143.9 Å²	143.9	100%	1.177	77%	0.769	S	S	*	*				0	100	0	-163.4	141.8	81.9	0	0	107.1	R3	M1-R3 PolarHBondContact O-N 3.24Å
2	T	64.3	Low	58.3	Low	135 Å²	135	135.6 Å²	135.6	83%	0.828	73%	0.731	S	S	*	*			trans	-63.7	116	179.3	-11.5	0	0	0	0	107.5	T4	T2-T4 PolarHBondContact O-N 3.1Å; T2-T4 VanDerWaalsContact O-N 3.1Å
3	R	61.1	Low	58.2	Low	242 Å²	242	131.4 Å²	131.4	91%	0.913	71%	0.713	S	S	*	*			trans	-69.5	103.8	174.3	-179.5	179.1	176.1	175.7	-1.1	107.2	M1	M1-R3 PolarHBondContact O-N 3.24Å
4	T	63.9	Low	58.2	Low	119 Å²	119	130.1 Å²	130.1	73%	0.73	71%	0.711	S	S	*	*	P	Polyproline II helix	trans	-57.4	148.2	174.2	-47.6	0	0	0	0	110.6	T2	T2-T4 PolarHBondContact O-N 3.1Å; T2-T4 VanDerWaalsContact O-N 3.1Å
5	D	58.8	Low	58.1	Low	142 Å²	142	134.9 Å²	134.9	76%	0.759	72%	0.716	S	S	*	*	P	Polyproline II helix	trans	-53.3	151.9	-150	-52.4	-86.4	0	0	0	119
6	P	63.3	Low	58.2	Low	118 Å²	118	134.9 Å²	134.9	77%	0.766	71%	0.711	S	S	*	*	P	Polyproline II helix	trans	-100.5	161.4	153.7	38.1	-27.7	0	0	0	110.7
7	P	60.4	Low	58.4	Low	82 Å²	82	135.4 Å²	135.4	53%	0.532	71%	0.714	S	S	.	*			cis	-129.8	133.5	-12.7	35.2	-16.6	0	0	0	112.2	L9	P7-L9 HydrophobicContact CB-CB 3.99Å; P7-L9 PolarHBondContact O-N 3.1Å
8	D	60.9	Low	58.2	Low	151 Å²	151	135.3 Å²	135.3	81%	0.807	71%	0.712	S	S	*	*	T	Hydrogen-bonded Turn	trans	-69.3	41.7	162.9	-87.6	-38.7	0	0	0	112.6	S12	D8-S12 VanDerWaalsContact O-CB 3.29Å; D8-S12 WeakPolarHBondContact O-CB 2.96Å
9	L	58.3	Low	58.4	Low	125 Å²	125	138.7 Å²	138.7	65%	0.654	72%	0.721	S	S	*	*	T	Hydrogen-bonded Turn	trans	-125.1	-13.3	-171.1	-130.9	131.6	0	0	0	113.2	P7 T13	P7-L9 HydrophobicContact CB-CB 3.99Å; P7-L9 PolarHBondContact O-N 3.1Å; L9-T13 WeakPolarHBondContact O-CG2 3.31Å; L9-T13 PolarHBondContact O-OG1 2.97Å
10	L	56.8	Low	58.4	Low	126 Å²	126	137.9 Å²	137.9	66%	0.66	72%	0.722	S	S	*	*	T	Hydrogen-bonded Turn	trans	-110.9	-29.7	169.4	-68.4	178.9	0	0	0	113.2	T13 V14	L10-T13 WeakPolarHBondContact CA-OG1 3.18Å; L10-T13 PolarHBondContact O-OG1 2.75Å; L10-V14 VanDerWaalsContact O-N 3.15Å; L10-V14 PolarHBondContact O-N 3.25Å; L10-V14 WeakPolarHBondContact O-CB 3.29Å; L10-V14 VanDerWaalsContact O-CB 3.31Å; L10-V14 WeakPolarHBondContact O-CG2 3.47Å
11	V	53.3	Low	58.5	Low	104 Å²	104	136.8 Å²	136.8	63%	0.63	72%	0.721	S	S	*	*	T	Hydrogen-bonded Turn	trans	-78.7	-29.1	173.8	-174.4	0	0	0	0	111
12	S	53	Low	59.2	Low	44 Å²	44	130.9 Å²	130.9	31%	0.308	69%	0.694	S	S	.	*	T	Hydrogen-bonded Turn	trans	-80.5	-32.6	176.9	-156.4	0	0	0	0	112.9	D8 Y15 Q16	D8-S12 VanDerWaalsContact O-CB 3.29Å; D8-S12 WeakPolarHBondContact O-CB 2.96Å; S12-Y15 PolarHBondContact O-N 3.48Å; S12-Q16 WeakPolarHBondContact O-CB 3.37Å; S12-Q16 PolarHBondContact O-N 3.42Å; S12-Q16 PolarHBondContact OG-NE2 2.73Å; S12-Q16 VanDerWaalsContact OG-NE2 3.1Å
13	T	56.7	Low	58.9	Low	81 Å²	81	129.6 Å²	129.6	50%	0.497	69%	0.688	S	S	.	*	T	Hydrogen-bonded Turn	trans	-79.3	-18.6	172.4	52.4	0	0	0	0	113.1	L9 L10 Y15	L9-T13 WeakPolarHBondContact O-CG2 3.31Å; L9-T13 PolarHBondContact O-OG1 2.97Å; L10-T13 WeakPolarHBondContact CA-OG1 3.18Å; L10-T13 PolarHBondContact O-OG1 2.75Å; T13-Y15 PolarHBondContact O-N 3.15Å
14	V	58.1	Low	58.8	Low	114 Å²	114	121.1 Å²	121.1	69%	0.691	68%	0.675	S	S	*	*	T	Hydrogen-bonded Turn	trans	-71.5	-18.4	167.1	167.7	0	0	0	0	111.5	L10	L10-V14 VanDerWaalsContact O-N 3.15Å; L10-V14 PolarHBondContact O-N 3.25Å; L10-V14 WeakPolarHBondContact O-CB 3.29Å; L10-V14 VanDerWaalsContact O-CB 3.31Å; L10-V14 WeakPolarHBondContact O-CG2 3.47Å
15	Y	55.9	Low	58.5	Low	201 Å²	201	122.2 Å²	122.2	79%	0.788	68%	0.676	S	S	*	*	T	Hydrogen-bonded Turn	trans	-117.3	-5.8	-179.3	-90.5	-82.5	0	0	0	116.4	S12 T13	S12-Y15 PolarHBondContact O-N 3.48Å; T13-Y15 PolarHBondContact O-N 3.15Å
16	Q	61.2	Low	58.5	Low	136 Å²	136	121.4 Å²	121.4	64%	0.636	68%	0.676	S	S	*	*	S	Bend	trans	-137.4	97.9	177.3	-58.1	-174.5	76.1	0	0	105.8	S12	S12-Q16 WeakPolarHBondContact O-CB 3.37Å; S12-Q16 PolarHBondContact O-N 3.42Å; S12-Q16 PolarHBondContact OG-NE2 2.73Å; S12-Q16 VanDerWaalsContact OG-NE2 3.1Å
17	D	60.7	Low	58.4	Low	143 Å²	143	121 Å²	121	77%	0.765	68%	0.677	S	S	*	*	S	Bend		-174.3	115.1	58.5	-159.9	2.1	0	0	0	102.1
18	I	55.5	Low	58.4	Low	133 Å²	133	126.5 Å²	126.5	68%	0.682	69%	0.692	S	S	*	*				171	123.3	103.4	-80.7	146.1	0	0	0	103.7	V20	I18-V20 VanDerWaalsContact C-N 3.34Å; I18-V20 PolarHBondContact O-N 2.85Å
19	K	60.7	Low	58.1	Low	200 Å²	200	134.6 Å²	134.6	87%	0.87	71%	0.711	S	S	*	*			trans	-51.8	104.6	161	-79.8	-179	174.5	-117.2	0	107.2	V21	K19-V21 VanDerWaalsContact C-N 3.35Å; K19-V21 PolarHBondContact O-N 3.2Å
20	V	59.1	Low	58.1	Low	123 Å²	123	135.1 Å²	135.1	75%	0.745	71%	0.714	S	S	*	*			trans	-52.1	106	169	177.1	0	0	0	0	105.9	I18 D22	I18-V20 VanDerWaalsContact C-N 3.34Å; I18-V20 PolarHBondContact O-N 2.85Å; V20-D22 PolarHBondContact O-N 2.84Å
21	V	61.3	Low	58.2	Low	114 Å²	114	135.6 Å²	135.6	69%	0.691	72%	0.717	S	S	*	*			trans	-51.7	124.7	170.7	176.8	0	0	0	0	105.8	K19 P23	K19-V21 VanDerWaalsContact C-N 3.35Å; K19-V21 PolarHBondContact O-N 3.2Å; V21-P23 WeakPolarHBondContact O-CD 3.36Å
22	D	60.9	Low	58.4	Low	116 Å²	116	137.3 Å²	137.3	62%	0.62	72%	0.722	S	S	*	*			trans	-43	115.5	178.9	-103.5	-43.1	0	0	0	109.9	V20 G24 L25	V20-D22 PolarHBondContact O-N 2.84Å; D22-G24 PolarHBondContact O-N 2.94Å; D22-L25 HydrophobicContact CB-CD1 4.36Å; D22-L25 PolarHBondContact O-N 3.21Å
23	P	56.6	Low	58.8	Low	108 Å²	108	142.8 Å²	142.8	70%	0.701	75%	0.746	S	S	*	*	T	Hydrogen-bonded Turn	trans	-65.4	-4.6	179.2	23.7	-30.1	0	0	0	112.4	V21	V21-P23 WeakPolarHBondContact O-CD 3.36Å
24	G	58.8	Low	58.9	Low	63 Å²	63	146.7 Å²	146.7	65%	0.649	76%	0.762	S	S	*	*	T	Hydrogen-bonded Turn	trans	-84.1	-8.7	176.5	0	0	0	0	0	115.9	D22	D22-G24 PolarHBondContact O-N 2.94Å
25	L	57.7	Low	58.9	Low	143 Å²	143	148.9 Å²	148.9	75%	0.749	77%	0.767	S	S	*	*	S	Bend	trans	-93.9	-4.5	-176.5	-86.9	163.8	0	0	0	115	D22	D22-L25 HydrophobicContact CB-CD1 4.36Å; D22-L25 PolarHBondContact O-N 3.21Å
26	T	59.4	Low	59.2	Low	124 Å²	124	145.1 Å²	145.1	76%	0.761	77%	0.765	S	S	*	*	S	Bend	trans	-109.4	13.7	177.5	77.6	0	0	0	0	114.2
27	S	62	Low	59	Low	111 Å²	111	145.8 Å²	145.8	78%	0.776	78%	0.775	S	S	*	*			trans	-112.4	64.8	171.3	-163.8	0	0	0	0	110.8
28	K	58.8	Low	58.9	Low	197 Å²	197	146.1 Å²	146.1	86%	0.857	78%	0.776	S	S	*	*			trans	-154.4	77	154.8	-151.4	175.4	-173.9	177.3	0	110.5
29	R	55.6	Low	59.2	Low	321 Å²	321	147.3 Å²	147.3	100%	1.211	79%	0.785	S	S	*	*			trans	-174.3	0	138.6	-99.7	171.3	-157.7	179.3	6.1	108.9

Retrieved 29 of 29 residues in 43.8 ms (Link to these results)

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