A0A087WP26_MOUSE Loading...

Breast cancer 1, early onset

AlphaFold DB , UniProt , Accession A0A087WP26, Species MOUSE (Mus musculus, Mouse), Gene Brca1, Length 79 aa.

						>A0A087WP26_MOUSE|A0A087WP26|Brca1
MLKLLNQKKGPSQCPLCKNEITKRSLQGSTRFSQLAEELLRIMAAFELDTGMQLTNGFSFSKKRNNSCERLNEEASIIQ
					

Structure Viewer

Loading PAE data...

(Predicted Aligned Error values between residue pairs)

Download Structure PDB PAE Table

Site	Residue	pLDDT	pLDDT confidence	pLDDT₁₀	pLDDT10 confidence	SASA	SASA [Å²]	SASA₁₀	SASA10 [Å²]	RSA	RSA unformatted	RSA₁₀	RSA10 unformatted	Surface	Surface10 (not used)	Disorder (not used)	Disorder	Sec. str.	Secondary structure	Isomer	Phi (φ)	Psi (ψ)	Omega (ω)	Chi 1 (χ₁)	Chi 2 (χ₂)	Chi 3 (χ₃)	Chi 4 (χ₄)	Chi 5 (χ₅)	Tau (τ)	Contacts (colored by PAE)	Contact details
1	M	57.1	Low	63.4	Low	146 Å²	146	122.1 Å²	122.1	72%	0.719	62%	0.618	S	S	*	*				0	-22	0	-94.4	178.6	-82	0	0	115.1	K3 L26	M1-K3 PolarHBondContact O-N 3.28Å; M1-K3 VanDerWaalsContact O-N 3.14Å; M1-L26 HydrophobicContact CB-CD2 4.47Å
2	L	57.9	Low	65.1	Low	118 Å²	118	112.7 Å²	112.7	62%	0.618	57%	0.572	S	S	*	*	G	3₁₀ helix	trans	-68.9	-11.1	-175.4	-65.5	168.2	0	0	0	115.7	L4 L5	L2-L4 PolarHBondContact O-N 3.02Å; L2-L5 HydrophobicContact CD2-CD1 4.28Å; L2-L5 PolarHBondContact O-N 3.24Å
3	K	61.5	Low	66.7	Low	187 Å²	187	113.4 Å²	113.4	81%	0.813	57%	0.572	S	S	*	*	G	3₁₀ helix	trans	-59.6	-30.5	-179.6	-66.6	-174.7	178.8	-178.9	0	113.1	M1 L5 N6	M1-K3 PolarHBondContact O-N 3.28Å; M1-K3 VanDerWaalsContact O-N 3.14Å; K3-L5 PolarHBondContact O-N 3Å; K3-N6 PolarHBondContact O-N 2.99Å
4	L	61.8	Low	68	Low	78 Å²	78	106.6 Å²	106.6	41%	0.408	54%	0.54	S	S	.	.	G	3₁₀ helix	trans	-65.2	-23	176.9	-83.5	156.1	0	0	0	113.4	L2 S12	L2-L4 PolarHBondContact O-N 3.02Å; L4-S12 WeakPolarHBondContact O-CB 3.45Å; L4-S12 PolarHBondContact O-OG 2.83Å
5	L	61.1	Low	69.2	Low	15 Å²	15	104.5 Å²	104.5	8%	0.079	54%	0.536	C	S	.	.	G	3₁₀ helix	trans	-104.6	7.2	-173.7	-65.3	157.1	0	0	0	113.1	L2 K3 Q7 I21 K23 L26	L2-L5 HydrophobicContact CD2-CD1 4.28Å; L2-L5 PolarHBondContact O-N 3.24Å; K3-L5 PolarHBondContact O-N 3Å; L5-Q7 VanDerWaalsContact C-N 3.29Å; L5-I21 HydrophobicContact CD2-CG2 4.42Å; L5-K23 HydrophobicContact CB-CG 3.96Å; L5-K23 HydrophobicContact CD1-CB 4.3Å; L5-K23 HydrophobicContact CD1-CG 3.93Å; L5-K23 HydrophobicContact CD2-CG 3.98Å; L5-K23 HydrophobicContact CG-CG 4.17Å; L5-K23 WeakPolarHBondContact O-CE 3.48Å; L5-L26 HydrophobicContact CD1-CB 3.9Å; L5-L26 HydrophobicContact CD1-CD2 3.38Å; L5-L26 HydrophobicContact CD1-CG 4.26Å; L5-L26 HydrophobicContact CG-CD2 4.14Å
6	N	62.5	Low	70.5	Confident	114 Å²	114	108.1 Å²	108.1	61%	0.61	56%	0.556	S	S	*	*			trans	-88	6.7	177	-74.5	-21.4	0	0	0	112.9	K3	K3-N6 PolarHBondContact O-N 2.99Å
7	Q	66.3	Low	71.7	Confident	137 Å²	137	106 Å²	106	64%	0.64	55%	0.552	S	S	*	*			trans	-68.4	133.1	175	-63.4	-152.3	70.7	0	0	110.2	L5 K9	L5-Q7 VanDerWaalsContact C-N 3.29Å; Q7-K9 VanDerWaalsContact C-N 3.33Å; Q7-K9 PolarHBondContact O-N 2.74Å
8	K	59.2	Low	72.6	Confident	211 Å²	211	107.6 Å²	107.6	92%	0.917	55%	0.554	S	S	*	*	S	Bend	trans	-75.1	-14.2	-170	-70.5	-173.9	176.5	-178.8	0	114.4
9	K	65.1	Low	73.5	Confident	199 Å²	199	107.7 Å²	107.7	87%	0.865	56%	0.556	S	S	*	*	S	Bend	trans	-146.9	130.7	-178.9	-70.7	-174.6	176.8	-179.5	0	111.4	Q7	Q7-K9 VanDerWaalsContact C-N 3.33Å; Q7-K9 PolarHBondContact O-N 2.74Å
10	G	70.6	Confident	74.3	Confident	61 Å²	61	109.3 Å²	109.3	63%	0.629	56%	0.56	S	S	*	*	S	Bend	trans	88	162	172.1	0	0	0	0	0	115.7
11	P	74.4	Confident	74.8	Confident	77 Å²	77	105.4 Å²	105.4	50%	0.5	54%	0.54	S	S	.	.	P	Polyproline II helix	trans	-63.4	138	173.3	26.2	-31.5	0	0	0	110.4	E20	P11-E20 HydrophobicContact CB-CB 4.29Å; P11-E20 HydrophobicContact CB-CG 4.2Å; P11-E20 HydrophobicContact CG-CG 4.18Å; P11-E20 WeakPolarHBondContact CG-OE1 3.48Å
12	S	83.4	Confident	76.1	Confident	9 Å²	9	102 Å²	102	6%	0.063	53%	0.528	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-71.7	136.3	174	-64.4	0	0	0	0	109.4	L4 I21	L4-S12 WeakPolarHBondContact O-CB 3.45Å; L4-S12 PolarHBondContact O-OG 2.83Å; S12-I21 WeakPolarHBondContact O-CA 3.49Å; S12-I21 PolarHBondContact O-N 3.11Å
13	Q	86.2	Confident	77.1	Confident	122 Å²	122	103.4 Å²	103.4	57%	0.57	53%	0.529	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-93.7	142.6	174.5	-69.2	-178.1	-12.4	0	0	111.3
14	C	85.1	Confident	78	Confident	19 Å²	19	105 Å²	105	13%	0.128	53%	0.53	C	S	.	.	P	Polyproline II helix	trans	-61.2	124.6	172.2	-173.7	0	0	0	0	110	L16 C17 K18 N19 I21	C14-L16 PolarHBondContact O-N 2.94Å; C14-C17 WeakPolarHBondContact CB-SG 3.22Å; C14-C17 PolarHBondContact SG-SG 2.9Å; C14-K18 WeakPolarHBondContact O-CA 3.43Å; C14-K18 PolarHBondContact O-N 3.41Å; C14-N19 PolarHBondContact N-O 3.23Å; C14-I21 VanDerWaalsContact CA-CD1 3.44Å; C14-I21 HydrophobicContact CB-CD1 3.52Å; C14-I21 HydrophobicContact CB-CG1 3.95Å
15	P	85.6	Confident	78.9	Confident	75 Å²	75	104.9 Å²	104.9	49%	0.487	54%	0.536	S	S	.	.	T	Hydrogen-bonded Turn	trans	-63.3	-27.2	179.6	24.2	-32.6	0	0	0	112.5	K18	P15-K18 PolarHBondContact O-NZ 3.42Å
16	L	89.9	Confident	79.9	Confident	161 Å²	161	106.2 Å²	106.2	84%	0.843	54%	0.543	S	S	*	.	T	Hydrogen-bonded Turn	trans	-87.1	-52.9	-176.9	-57.3	178.5	0	0	0	112.8	C14	C14-L16 PolarHBondContact O-N 2.94Å
17	C	90.9	Very high	80.9	Confident	73 Å²	73	108.3 Å²	108.3	49%	0.493	55%	0.549	S	S	.	.	T	Hydrogen-bonded Turn	trans	-111.2	1.1	-172.7	66.5	0	0	0	0	114.9	C14 N19	C14-C17 WeakPolarHBondContact CB-SG 3.22Å; C14-C17 PolarHBondContact SG-SG 2.9Å; C17-N19 PolarHBondContact O-N 3.28Å; C17-N19 PolarHBondContact O-OD1 3.23Å
18	K	88.4	Confident	81.7	Confident	134 Å²	134	104.5 Å²	104.5	58%	0.583	55%	0.546	S	S	*	.			trans	62.6	-4.9	178.6	-49.2	-53.1	-176.8	-163.2	0	117	C14 P15	C14-K18 WeakPolarHBondContact O-CA 3.43Å; C14-K18 PolarHBondContact O-N 3.41Å; P15-K18 PolarHBondContact O-NZ 3.42Å
19	N	89.3	Confident	83.1	Confident	111 Å²	111	97.3 Å²	97.3	59%	0.594	52%	0.522	S	S	*	.			trans	-58.9	150.5	172.3	-68.5	0.4	0	0	0	112	C14 C17	C14-N19 PolarHBondContact N-O 3.23Å; C17-N19 PolarHBondContact O-N 3.28Å; C17-N19 PolarHBondContact O-OD1 3.23Å
20	E	88.5	Confident	84.4	Confident	138 Å²	138	92.6 Å²	92.6	65%	0.645	51%	0.511	S	S	*	.	E	Extended strand (participates in β ladder)	trans	-65.2	135.3	173.5	-64.3	-170.2	167.2	0	0	111.3	P11	P11-E20 HydrophobicContact CB-CB 4.29Å; P11-E20 HydrophobicContact CB-CG 4.2Å; P11-E20 HydrophobicContact CG-CG 4.18Å; P11-E20 WeakPolarHBondContact CG-OE1 3.48Å
21	I	86.4	Confident	85.5	Confident	28 Å²	28	99.7 Å²	99.7	14%	0.144	52%	0.519	C	S	.	.	E	Extended strand (participates in β ladder)	trans	-119	132.6	177.1	-58.6	-177.7	0	0	0	108.1	L5 S12 C14 L26	L5-I21 HydrophobicContact CD2-CG2 4.42Å; S12-I21 WeakPolarHBondContact O-CA 3.49Å; S12-I21 PolarHBondContact O-N 3.11Å; C14-I21 VanDerWaalsContact CA-CD1 3.44Å; C14-I21 HydrophobicContact CB-CD1 3.52Å; C14-I21 HydrophobicContact CB-CG1 3.95Å; I21-L26 HydrophobicContact CG2-CB 3.88Å; I21-L26 HydrophobicContact CG2-CD1 4.23Å
22	T	84.4	Confident	86.4	Confident	74 Å²	74	102.5 Å²	102.5	45%	0.454	52%	0.523	S	S	.	.			trans	-104.9	161.8	173.5	71.5	0	0	0	0	110.3	R24 S25 L26	T22-R24 PolarHBondContact O-N 3.39Å; T22-R24 PolarHBondContact OG1-N 3.2Å; T22-S25 PolarHBondContact N-OG 3.35Å; T22-S25 PolarHBondContact O-N 2.98Å; T22-S25 PolarHBondContact O-OG 3.03Å; T22-S25 WeakPolarHBondContact OG1-CB 3.44Å; T22-S25 PolarHBondContact OG1-N 3.48Å; T22-S25 PolarHBondContact OG1-OG 3.22Å; T22-L26 PolarHBondContact O-N 2.95Å; T22-L26 VanDerWaalsContact O-N 3.11Å
23	K	78	Confident	86.7	Confident	148 Å²	148	104.6 Å²	104.6	64%	0.643	54%	0.538	S	S	*	.	T	Hydrogen-bonded Turn	trans	-57.7	-32.3	172.2	-69.2	-168.6	171.7	177.7	0	112.6	L5	L5-K23 HydrophobicContact CB-CG 3.96Å; L5-K23 HydrophobicContact CD1-CB 4.3Å; L5-K23 HydrophobicContact CD1-CG 3.93Å; L5-K23 HydrophobicContact CD2-CG 3.98Å; L5-K23 HydrophobicContact CG-CG 4.17Å; L5-K23 WeakPolarHBondContact O-CE 3.48Å
24	R	80.7	Confident	87.1	Confident	221 Å²	221	104 Å²	104	83%	0.834	54%	0.535	S	S	*	.	T	Hydrogen-bonded Turn	trans	-77.7	-34.5	-178.8	-169.1	-175.5	-68.8	149.2	-3.2	112.5	T22	T22-R24 PolarHBondContact O-N 3.39Å; T22-R24 PolarHBondContact OG1-N 3.2Å
25	S	80.9	Confident	87.6	Confident	76 Å²	76	108.7 Å²	108.7	53%	0.531	56%	0.558	S	S	.	*	T	Hydrogen-bonded Turn	trans	-81.2	-21.9	179.1	61	0	0	0	0	113.4	T22 Q27	T22-S25 PolarHBondContact N-OG 3.35Å; T22-S25 PolarHBondContact O-N 2.98Å; T22-S25 PolarHBondContact O-OG 3.03Å; T22-S25 WeakPolarHBondContact OG1-CB 3.44Å; T22-S25 PolarHBondContact OG1-N 3.48Å; T22-S25 PolarHBondContact OG1-OG 3.22Å; S25-Q27 PolarHBondContact O-N 2.96Å
26	L	82.8	Confident	88	Confident	42 Å²	42	107 Å²	107	22%	0.22	55%	0.55	C	S	.	*			trans	-82.9	96.1	174.4	-166.4	70.7	0	0	0	111.1	M1 L5 I21 T22	M1-L26 HydrophobicContact CB-CD2 4.47Å; L5-L26 HydrophobicContact CD1-CB 3.9Å; L5-L26 HydrophobicContact CD1-CD2 3.38Å; L5-L26 HydrophobicContact CD1-CG 4.26Å; L5-L26 HydrophobicContact CG-CD2 4.14Å; I21-L26 HydrophobicContact CG2-CB 3.88Å; I21-L26 HydrophobicContact CG2-CD1 4.23Å; T22-L26 PolarHBondContact O-N 2.95Å; T22-L26 VanDerWaalsContact O-N 3.11Å
27	Q	82.1	Confident	88.1	Confident	158 Å²	158	104.4 Å²	104.4	74%	0.738	53%	0.534	S	S	*	.			trans	-108.1	149.9	172.9	-62.6	-174.1	-6.7	0	0	110.8	S25	S25-Q27 PolarHBondContact O-N 2.96Å
28	G	83.5	Confident	88.3	Confident	57 Å²	57	104.9 Å²	104.9	59%	0.588	53%	0.529	S	S	*	.			trans	-67.8	139.6	170.8	0	0	0	0	0	110.4
29	S	89.4	Confident	88.5	Confident	60 Å²	60	103.1 Å²	103.1	42%	0.42	53%	0.525	S	S	.	.			trans	-96	105.8	174.3	173.7	0	0	0	0	110	R31 F32 S33	S29-R31 VanDerWaalsContact C-N 3.28Å; S29-R31 PolarHBondContact O-N 2.93Å; S29-F32 PolarHBondContact O-N 3.35Å; S29-F32 VanDerWaalsContact O-N 3.15Å; S29-F32 WeakPolarHBondContact OG-CB 3.41Å; S29-F32 PolarHBondContact OG-N 3.15Å; S29-S33 PolarHBondContact O-N 3.31Å; S29-S33 PolarHBondContact O-OG 3.4Å
30	T	91.9	Very high	88.6	Confident	101 Å²	101	101.1 Å²	101.1	62%	0.62	51%	0.514	S	S	*	.	H	α-helix	trans	-57.2	-42.3	177.5	-52.3	0	0	0	0	111.8	F32 S33 Q34	T30-F32 VanDerWaalsContact C-N 3.31Å; T30-F32 PolarHBondContact O-N 3.14Å; T30-S33 WeakPolarHBondContact O-CB 3.43Å; T30-S33 PolarHBondContact O-N 2.68Å; T30-Q34 WeakPolarHBondContact O-CG 3.43Å; T30-Q34 PolarHBondContact O-N 3.36Å
31	R	93.6	Very high	88.8	Confident	210 Å²	210	101.5 Å²	101.5	79%	0.792	51%	0.51	S	S	*	.	H	α-helix	trans	-60.6	-41.7	178.1	-69.2	-177	65.3	-150	-1.1	111.8	S29 L35	S29-R31 VanDerWaalsContact C-N 3.28Å; S29-R31 PolarHBondContact O-N 2.93Å; R31-L35 WeakPolarHBondContact O-CB 3.43Å; R31-L35 PolarHBondContact O-N 2.68Å
32	F	92.9	Very high	89.1	Confident	136 Å²	136	105.5 Å²	105.5	60%	0.596	53%	0.53	S	S	*	.	H	α-helix	trans	-69.3	-39.6	177.6	-174.1	-98.6	0	0	0	111.7	S29 T30 L35 A36	S29-F32 PolarHBondContact O-N 3.35Å; S29-F32 VanDerWaalsContact O-N 3.15Å; S29-F32 WeakPolarHBondContact OG-CB 3.41Å; S29-F32 PolarHBondContact OG-N 3.15Å; T30-F32 VanDerWaalsContact C-N 3.31Å; T30-F32 PolarHBondContact O-N 3.14Å; F32-L35 PolarHBondContact O-N 2.92Å; F32-A36 WeakPolarHBondContact O-CB 3.47Å; F32-A36 PolarHBondContact O-N 3.05Å
33	S	90.8	Very high	89.5	Confident	53 Å²	53	104.1 Å²	104.1	37%	0.371	52%	0.519	S	S	.	.	H	α-helix	trans	-58.4	-48.5	174.1	-69.1	0	0	0	0	111.9	S29 T30 L35 A36 E37	S29-S33 PolarHBondContact O-N 3.31Å; S29-S33 PolarHBondContact O-OG 3.4Å; T30-S33 WeakPolarHBondContact O-CB 3.43Å; T30-S33 PolarHBondContact O-N 2.68Å; S33-L35 PolarHBondContact O-N 3.38Å; S33-A36 PolarHBondContact O-N 3.39Å; S33-E37 WeakPolarHBondContact O-CG 3.46Å; S33-E37 PolarHBondContact O-N 2.97Å
34	Q	93.6	Very high	90	Very high	110 Å²	110	98.7 Å²	98.7	51%	0.514	50%	0.502	S	S	.	.	H	α-helix	trans	-60	-46.3	176.5	-72	171.8	-25.7	0	0	111.8	T30 A36 E37 E38	T30-Q34 WeakPolarHBondContact O-CG 3.43Å; T30-Q34 PolarHBondContact O-N 3.36Å; Q34-A36 VanDerWaalsContact C-N 3.32Å; Q34-A36 PolarHBondContact O-N 2.98Å; Q34-E37 PolarHBondContact O-N 3.26Å; Q34-E38 WeakPolarHBondContact O-CG 3.31Å; Q34-E38 PolarHBondContact O-N 3.01Å
35	L	96.2	Very high	90.6	Very high	116 Å²	116	90.5 Å²	90.5	61%	0.607	48%	0.481	S	S	*	.	H	α-helix	trans	-57.6	-45.5	177.5	-179.4	67.2	0	0	0	111.9	R31 F32 S33 L39	R31-L35 WeakPolarHBondContact O-CB 3.43Å; R31-L35 PolarHBondContact O-N 2.68Å; F32-L35 PolarHBondContact O-N 2.92Å; S33-L35 PolarHBondContact O-N 3.38Å; L35-L39 VanDerWaalsContact O-CB 3.31Å; L35-L39 WeakPolarHBondContact O-CB 3.27Å; L35-L39 PolarHBondContact O-N 3.01Å
36	A	92.8	Very high	91.1	Very high	39 Å²	39	91 Å²	91	32%	0.322	47%	0.474	S	S	.	.	H	α-helix	trans	-64.6	-41.2	178.4	0	0	0	0	0	112	F32 S33 Q34 L40	F32-A36 WeakPolarHBondContact O-CB 3.47Å; F32-A36 PolarHBondContact O-N 3.05Å; S33-A36 PolarHBondContact O-N 3.39Å; Q34-A36 VanDerWaalsContact C-N 3.32Å; Q34-A36 PolarHBondContact O-N 2.98Å; A36-L40 VanDerWaalsContact O-CG 3.27Å; A36-L40 WeakPolarHBondContact O-CG 3.39Å; A36-L40 PolarHBondContact O-N 3.22Å; A36-L40 VanDerWaalsContact O-N 3.1Å
37	E	92.8	Very high	91.6	Very high	107 Å²	107	91.1 Å²	91.1	50%	0.5	47%	0.474	S	S	.	.	H	α-helix	trans	-64.6	-46.5	177.7	-75.4	174.7	-159.5	0	0	112.6	S33 Q34 L40 R41	S33-E37 WeakPolarHBondContact O-CG 3.46Å; S33-E37 PolarHBondContact O-N 2.97Å; Q34-E37 PolarHBondContact O-N 3.26Å; E37-L40 PolarHBondContact O-N 3.29Å; E37-R41 PolarHBondContact O-N 3.24Å; E37-R41 VanDerWaalsContact O-N 3.13Å
38	E	94.2	Very high	92	Very high	84 Å²	84	90.3 Å²	90.3	39%	0.393	47%	0.474	S	S	.	.	H	α-helix	trans	-67.2	-38.9	179.1	-64.9	-51.6	143.7	0	0	111.6	Q34 L40 R41 I42	Q34-E38 WeakPolarHBondContact O-CG 3.31Å; Q34-E38 PolarHBondContact O-N 3.01Å; E38-L40 VanDerWaalsContact C-N 3.31Å; E38-L40 PolarHBondContact O-N 3.1Å; E38-R41 WeakPolarHBondContact O-CB 3.41Å; E38-R41 PolarHBondContact O-N 3.49Å; E38-R41 VanDerWaalsContact O-N 3.11Å; E38-R41 IonicContact OE1-CZ 3.12Å; E38-R41 IonicContact OE1-NH1 2.68Å; E38-R41 PolarHBondContact OE1-NH1 3.46Å; E38-R41 IonicContact OE1-NH2 3.26Å; E38-R41 PolarHBondContact OE1-NH2 3.22Å; E38-R41 IonicContact OE2-CZ 3.65Å; E38-R41 IonicContact OE2-NH1 2.98Å; E38-R41 PolarHBondContact OE2-NH1 3.25Å; E38-I42 WeakPolarHBondContact O-CG1 3.27Å; E38-I42 PolarHBondContact O-N 3.32Å
39	L	94.6	Very high	92.5	Very high	96 Å²	96	93.8 Å²	93.8	50%	0.503	48%	0.479	S	S	.	.	H	α-helix	trans	-59.8	-42.9	174.8	-177.4	61.2	0	0	0	111.5	L35 R41 I42 M43	L35-L39 VanDerWaalsContact O-CB 3.31Å; L35-L39 WeakPolarHBondContact O-CB 3.27Å; L35-L39 PolarHBondContact O-N 3.01Å; L39-R41 VanDerWaalsContact C-N 3.29Å; L39-R41 PolarHBondContact O-N 3.11Å; L39-I42 PolarHBondContact O-N 2.97Å; L39-M43 HydrophobicContact CG-SD 4.26Å; L39-M43 VanDerWaalsContact O-CG 3.27Å; L39-M43 WeakPolarHBondContact O-CG 3.42Å; L39-M43 PolarHBondContact O-N 3.04Å
40	L	91.3	Very high	92.7	Very high	69 Å²	69	94.1 Å²	94.1	36%	0.361	48%	0.478	S	S	.	.	H	α-helix	trans	-62.9	-34.2	176	-73.1	170.2	0	0	0	112.6	A36 E37 E38 M43 A44 F60	A36-L40 VanDerWaalsContact O-CG 3.27Å; A36-L40 WeakPolarHBondContact O-CG 3.39Å; A36-L40 PolarHBondContact O-N 3.22Å; A36-L40 VanDerWaalsContact O-N 3.1Å; E37-L40 PolarHBondContact O-N 3.29Å; E38-L40 VanDerWaalsContact C-N 3.31Å; E38-L40 PolarHBondContact O-N 3.1Å; L40-M43 HydrophobicContact CD2-SD 4.44Å; L40-A44 WeakPolarHBondContact O-CB 3.47Å; L40-A44 PolarHBondContact O-N 2.9Å; L40-F60 HydrophobicContact CD2-CD1 4.2Å; L40-F60 HydrophobicContact CD2-CD2 4.05Å; L40-F60 HydrophobicContact CD2-CE1 4.3Å; L40-F60 HydrophobicContact CD2-CE2 4.15Å; L40-F60 HydrophobicContact CD2-CG 4.07Å; L40-F60 HydrophobicContact CD2-CZ 4.28Å
41	R	91.4	Very high	92.5	Very high	146 Å²	146	92.2 Å²	92.2	55%	0.551	48%	0.479	S	S	*	.	H	α-helix	trans	-67.3	-43.9	174.4	-70	-174.5	-161.2	149.8	12.8	111.7	E37 E38 L39 M43 A44 A45	E37-R41 PolarHBondContact O-N 3.24Å; E37-R41 VanDerWaalsContact O-N 3.13Å; E38-R41 WeakPolarHBondContact O-CB 3.41Å; E38-R41 PolarHBondContact O-N 3.49Å; E38-R41 VanDerWaalsContact O-N 3.11Å; E38-R41 IonicContact OE1-CZ 3.12Å; E38-R41 IonicContact OE1-NH1 2.68Å; E38-R41 PolarHBondContact OE1-NH1 3.46Å; E38-R41 IonicContact OE1-NH2 3.26Å; E38-R41 PolarHBondContact OE1-NH2 3.22Å; E38-R41 IonicContact OE2-CZ 3.65Å; E38-R41 IonicContact OE2-NH1 2.98Å; E38-R41 PolarHBondContact OE2-NH1 3.25Å; L39-R41 VanDerWaalsContact C-N 3.29Å; L39-R41 PolarHBondContact O-N 3.11Å; R41-M43 VanDerWaalsContact C-N 3.33Å; R41-M43 PolarHBondContact O-N 3.13Å; R41-A44 PolarHBondContact O-N 3.39Å; R41-A45 PolarHBondContact O-N 3.39Å
42	I	93.9	Very high	92.2	Very high	112 Å²	112	88 Å²	88	57%	0.574	47%	0.47	S	S	*	.	H	α-helix	trans	-60.6	-46.2	177.5	-66.2	166.2	0	0	0	110.1	E38 L39 A44 A45 F46	E38-I42 WeakPolarHBondContact O-CG1 3.27Å; E38-I42 PolarHBondContact O-N 3.32Å; L39-I42 PolarHBondContact O-N 2.97Å; I42-A44 VanDerWaalsContact C-N 3.33Å; I42-A44 PolarHBondContact O-N 3.3Å; I42-A45 PolarHBondContact O-N 3.43Å; I42-F46 WeakPolarHBondContact O-CB 3.42Å; I42-F46 PolarHBondContact O-N 2.92Å
43	M	92.1	Very high	91.8	Very high	45 Å²	45	87.7 Å²	87.7	22%	0.222	47%	0.47	C	S	.	.	H	α-helix	trans	-58.3	-45.4	176.2	-67.9	173	65.9	0	0	111.6	L39 L40 R41 F46 E47 L54 T55	L39-M43 HydrophobicContact CG-SD 4.26Å; L39-M43 VanDerWaalsContact O-CG 3.27Å; L39-M43 WeakPolarHBondContact O-CG 3.42Å; L39-M43 PolarHBondContact O-N 3.04Å; L40-M43 HydrophobicContact CD2-SD 4.44Å; R41-M43 VanDerWaalsContact C-N 3.33Å; R41-M43 PolarHBondContact O-N 3.13Å; M43-F46 PolarHBondContact O-N 3.38Å; M43-E47 WeakPolarHBondContact O-CG 3.45Å; M43-E47 PolarHBondContact O-N 3.15Å; M43-L54 HydrophobicContact CB-CD2 3.72Å; M43-L54 HydrophobicContact CE-CD2 3.6Å; M43-L54 HydrophobicContact CE-CG 4.4Å; M43-L54 HydrophobicContact CG-CD2 3.5Å; M43-L54 VanDerWaalsContact CG-CD2 3.5Å; M43-L54 HydrophobicContact SD-CD2 4.3Å; M43-T55 HydrophobicContact CE-CG2 3.75Å
44	A	89.3	Confident	91.2	Very high	34 Å²	34	89.3 Å²	89.3	28%	0.281	47%	0.474	S	S	.	.	H	α-helix	trans	-66.8	-37	179.3	0	0	0	0	0	113.3	L40 R41 I42 L48	L40-A44 WeakPolarHBondContact O-CB 3.47Å; L40-A44 PolarHBondContact O-N 2.9Å; R41-A44 PolarHBondContact O-N 3.39Å; I42-A44 VanDerWaalsContact C-N 3.33Å; I42-A44 PolarHBondContact O-N 3.3Å; A44-L48 WeakPolarHBondContact O-CB 3.43Å; A44-L48 PolarHBondContact O-N 3.34Å; A44-L48 VanDerWaalsContact O-N 3.16Å
45	A	91.8	Very high	90	Very high	49 Å²	49	85.9 Å²	85.9	41%	0.405	46%	0.461	S	S	.	.	H	α-helix	trans	-66	-43.6	174.4	0	0	0	0	0	110.8	R41 I42 E47 L48 D49	R41-A45 PolarHBondContact O-N 3.39Å; I42-A45 PolarHBondContact O-N 3.43Å; A45-E47 PolarHBondContact O-N 2.85Å; A45-L48 WeakPolarHBondContact O-CB 3.48Å; A45-L48 PolarHBondContact O-N 2.84Å; A45-L48 VanDerWaalsContact O-N 3.15Å; A45-D49 VanDerWaalsContact O-CG 3.3Å; A45-D49 PolarHBondContact O-N 3.03Å
46	F	93.3	Very high	88.2	Confident	87 Å²	87	87.5 Å²	87.5	38%	0.382	47%	0.47	S	S	.	.	H	α-helix	trans	-59	-46.6	175.8	176.6	-90.4	0	0	0	112.8	I42 M43 L48 D49 T50 M52 L54	I42-F46 WeakPolarHBondContact O-CB 3.42Å; I42-F46 PolarHBondContact O-N 2.92Å; M43-F46 PolarHBondContact O-N 3.38Å; F46-L48 VanDerWaalsContact C-N 3.26Å; F46-L48 PolarHBondContact O-N 2.71Å; F46-D49 PolarHBondContact O-N 3.4Å; F46-T50 HydrophobicContact CD2-CG2 4.07Å; F46-T50 HydrophobicContact CE1-CG2 4.44Å; F46-T50 HydrophobicContact CE2-CG2 3.76Å; F46-T50 HydrophobicContact CZ-CG2 3.96Å; F46-T50 WeakPolarHBondContact O-CB 3.43Å; F46-T50 WeakPolarHBondContact O-CG2 3.41Å; F46-T50 PolarHBondContact O-N 3.35Å; F46-T50 PolarHBondContact O-OG1 2.9Å; F46-M52 HydrophobicContact CE1-CB 4.35Å; F46-L54 HydrophobicContact CD1-CD1 3.99Å; F46-L54 HydrophobicContact CE1-CD1 3.84Å
47	E	92	Very high	86.6	Confident	44 Å²	44	89 Å²	89	21%	0.206	49%	0.489	C	S	.	.	H	α-helix	trans	-61.1	-37.6	176.7	-69.2	-175.6	156.3	0	0	111.3	M43 A45 G51 M52 L54 T55	M43-E47 WeakPolarHBondContact O-CG 3.45Å; M43-E47 PolarHBondContact O-N 3.15Å; A45-E47 PolarHBondContact O-N 2.85Å; E47-G51 VanDerWaalsContact O-CA 3.29Å; E47-G51 WeakPolarHBondContact O-CA 3.49Å; E47-G51 PolarHBondContact O-N 3.46Å; E47-M52 WeakPolarHBondContact CG-O 3.29Å; E47-L54 HydrophobicContact CG-CB 3.78Å; E47-L54 WeakPolarHBondContact OE1-CA 3.43Å; E47-L54 VanDerWaalsContact OE1-CB 3.29Å; E47-L54 WeakPolarHBondContact OE1-CB 3.29Å; E47-L54 PolarHBondContact OE1-N 2.63Å; E47-T55 PolarHBondContact OE1-N 3.21Å; E47-T55 PolarHBondContact OE1-OG1 2.86Å
48	L	89.8	Confident	84.9	Confident	141 Å²	141	91.3 Å²	91.3	74%	0.738	50%	0.498	S	S	*	.	H	α-helix	trans	-69.1	-42.5	178.5	-174.8	143.9	0	0	0	112.5	A44 A45 F46	A44-L48 WeakPolarHBondContact O-CB 3.43Å; A44-L48 PolarHBondContact O-N 3.34Å; A44-L48 VanDerWaalsContact O-N 3.16Å; A45-L48 WeakPolarHBondContact O-CB 3.48Å; A45-L48 PolarHBondContact O-N 2.84Å; A45-L48 VanDerWaalsContact O-N 3.15Å; F46-L48 VanDerWaalsContact C-N 3.26Å; F46-L48 PolarHBondContact O-N 2.71Å
49	D	94.3	Very high	83	Confident	130 Å²	130	92.7 Å²	92.7	70%	0.695	52%	0.516	S	S	*	.	H	α-helix	trans	-74.1	-34.1	-177.3	-68	-19.9	0	0	0	112.4	A45 F46	A45-D49 VanDerWaalsContact O-CG 3.3Å; A45-D49 PolarHBondContact O-N 3.03Å; F46-D49 PolarHBondContact O-N 3.4Å
50	T	94.5	Very high	81.1	Confident	67 Å²	67	94 Å²	94	41%	0.411	52%	0.518	S	S	.	.	H	α-helix	trans	-103.7	-19.2	-172.2	64.9	0	0	0	0	114.1	F46 M52	F46-T50 HydrophobicContact CD2-CG2 4.07Å; F46-T50 HydrophobicContact CE1-CG2 4.44Å; F46-T50 HydrophobicContact CE2-CG2 3.76Å; F46-T50 HydrophobicContact CZ-CG2 3.96Å; F46-T50 WeakPolarHBondContact O-CB 3.43Å; F46-T50 WeakPolarHBondContact O-CG2 3.41Å; F46-T50 PolarHBondContact O-N 3.35Å; F46-T50 PolarHBondContact O-OG1 2.9Å; T50-M52 PolarHBondContact O-N 3.16Å; T50-M52 VanDerWaalsContact O-N 3.17Å; T50-M52 WeakPolarHBondContact OG1-CB 3.46Å; T50-M52 PolarHBondContact OG1-N 3Å
51	G	88	Confident	79.3	Confident	61 Å²	61	96.5 Å²	96.5	63%	0.629	54%	0.542	S	S	*	.			trans	66.2	5.4	-169.6	0	0	0	0	0	114	E47	E47-G51 VanDerWaalsContact O-CA 3.29Å; E47-G51 WeakPolarHBondContact O-CA 3.49Å; E47-G51 PolarHBondContact O-N 3.46Å
52	M	87.5	Confident	77.4	Confident	123 Å²	123	96.6 Å²	96.6	61%	0.606	55%	0.546	S	S	*	.			trans	-86.1	124.4	177.4	-65.1	-175.2	66.8	0	0	109.9	F46 E47 T50 L54	F46-M52 HydrophobicContact CE1-CB 4.35Å; E47-M52 WeakPolarHBondContact CG-O 3.29Å; T50-M52 PolarHBondContact O-N 3.16Å; T50-M52 VanDerWaalsContact O-N 3.17Å; T50-M52 WeakPolarHBondContact OG1-CB 3.46Å; T50-M52 PolarHBondContact OG1-N 3Å; M52-L54 PolarHBondContact O-N 2.98Å
53	Q	83.5	Confident	75.2	Confident	128 Å²	128	100.5 Å²	100.5	60%	0.598	56%	0.559	S	S	*	*			trans	-70.9	113.4	174.2	-67.3	-72.9	100.7	0	0	109.8
54	L	78.3	Confident	73	Confident	87 Å²	87	107.1 Å²	107.1	46%	0.455	58%	0.581	S	S	.	*	S	Bend	trans	-81.3	-28	177.9	-159.1	75.4	0	0	0	110.7	M43 F46 E47 M52	M43-L54 HydrophobicContact CB-CD2 3.72Å; M43-L54 HydrophobicContact CE-CD2 3.6Å; M43-L54 HydrophobicContact CE-CG 4.4Å; M43-L54 HydrophobicContact CG-CD2 3.5Å; M43-L54 VanDerWaalsContact CG-CD2 3.5Å; M43-L54 HydrophobicContact SD-CD2 4.3Å; F46-L54 HydrophobicContact CD1-CD1 3.99Å; F46-L54 HydrophobicContact CE1-CD1 3.84Å; E47-L54 HydrophobicContact CG-CB 3.78Å; E47-L54 WeakPolarHBondContact OE1-CA 3.43Å; E47-L54 VanDerWaalsContact OE1-CB 3.29Å; E47-L54 WeakPolarHBondContact OE1-CB 3.29Å; E47-L54 PolarHBondContact OE1-N 2.63Å; M52-L54 PolarHBondContact O-N 2.98Å
55	T	68.4	Low	70.8	Confident	39 Å²	39	111.7 Å²	111.7	24%	0.239	60%	0.601	C	S	.	*			trans	-112.1	80.6	-179.5	57.7	0	0	0	0	112.5	M43 E47 G57 F58	M43-T55 HydrophobicContact CE-CG2 3.75Å; E47-T55 PolarHBondContact OE1-N 3.21Å; E47-T55 PolarHBondContact OE1-OG1 2.86Å; T55-G57 PolarHBondContact O-N 3.22Å; T55-F58 HydrophobicContact CG2-CB 4.37Å
56	N	58.8	Low	68.6	Low	149 Å²	149	115.9 Å²	115.9	80%	0.797	62%	0.617	S	S	*	*	S	Bend	trans	-72.6	80.4	163.9	-76	-7.9	0	0	0	109.5
57	G	58.2	Low	66.2	Low	70 Å²	70	116.2 Å²	116.2	72%	0.722	63%	0.63	S	S	*	*	S	Bend	trans	118.2	-1.9	167.9	0	0	0	0	0	117.6	T55	T55-G57 PolarHBondContact O-N 3.22Å
58	F	57.3	Low	63.6	Low	157 Å²	157	119.8 Å²	119.8	69%	0.689	66%	0.659	S	S	*	*			trans	-100.2	89.3	174.8	-81.6	-87.5	0	0	0	110.9	T55 F60	T55-F58 HydrophobicContact CG2-CB 4.37Å; F58-F60 VanDerWaalsContact C-N 3.25Å; F58-F60 HydrophobicContact CB-CD2 4.32Å; F58-F60 HydrophobicContact CB-CE2 4.04Å; F58-F60 PolarHBondContact O-N 3.48Å
59	S	54.4	Low	61.2	Low	112 Å²	112	120.4 Å²	120.4	78%	0.783	66%	0.658	S	S	*	*			trans	-72.6	81.6	169.8	49.5	0	0	0	0	110	S61	S59-S61 PolarHBondContact O-N 2.9Å
60	F	56.2	Low	58.6	Low	124 Å²	124	124 Å²	124	54%	0.544	66%	0.661	S	S	.	*			trans	-60.5	109.7	157.6	-71	-83.4	0	0	0	105.6	L40 F58 K62	L40-F60 HydrophobicContact CD2-CD1 4.2Å; L40-F60 HydrophobicContact CD2-CD2 4.05Å; L40-F60 HydrophobicContact CD2-CE1 4.3Å; L40-F60 HydrophobicContact CD2-CE2 4.15Å; L40-F60 HydrophobicContact CD2-CG 4.07Å; L40-F60 HydrophobicContact CD2-CZ 4.28Å; F58-F60 VanDerWaalsContact C-N 3.25Å; F58-F60 HydrophobicContact CB-CD2 4.32Å; F58-F60 HydrophobicContact CB-CE2 4.04Å; F58-F60 PolarHBondContact O-N 3.48Å; F60-K62 PolarHBondContact O-N 3.23Å
61	S	51.5	Low	56.1	Low	122 Å²	122	128.2 Å²	128.2	85%	0.853	68%	0.681	S	S	*	*			trans	-59.1	88.5	172.4	-58.9	0	0	0	0	107.6	S59 K63	S59-S61 PolarHBondContact O-N 2.9Å; S61-K63 VanDerWaalsContact C-N 3.26Å; S61-K63 PolarHBondContact O-N 3.27Å
62	K	52.3	Low	53.7	Low	147 Å²	147	133.1 Å²	133.1	64%	0.639	69%	0.692	S	S	*	*			trans	-62.4	97.3	173.1	-166.2	171.8	-172.7	167.7	0	103.4	F60 R64	F60-K62 PolarHBondContact O-N 3.23Å; K62-R64 HydrophobicContact CB-CG 4.44Å; K62-R64 HydrophobicContact CD-CG 4Å; K62-R64 HydrophobicContact CG-CG 3.83Å; K62-R64 PolarHBondContact O-N 2.92Å
63	K	48.3	Very low	51.5	Low	194 Å²	194	136 Å²	136	84%	0.843	70%	0.704	S	S	*	*			trans	-64.9	81.4	159.8	-170.5	177.3	-176.5	-177	0	104.2	S61 N65	S61-K63 VanDerWaalsContact C-N 3.26Å; S61-K63 PolarHBondContact O-N 3.27Å; K63-N65 PolarHBondContact O-N 2.75Å; K63-N65 PolarHBondContact O-OD1 2.73Å
64	R	44.8	Very low	49.5	Very low	184 Å²	184	139.5 Å²	139.5	69%	0.694	72%	0.721	S	S	*	*			trans	-61.1	96.9	166.5	-73.2	-171.6	-146.8	177.5	4.8	104.2	K62 N66	K62-R64 HydrophobicContact CB-CG 4.44Å; K62-R64 HydrophobicContact CD-CG 4Å; K62-R64 HydrophobicContact CG-CG 3.83Å; K62-R64 PolarHBondContact O-N 2.92Å; R64-N66 PolarHBondContact O-N 2.93Å
65	N	44.5	Very low	47.9	Very low	130 Å²	130	140 Å²	140	70%	0.695	74%	0.738	S	S	*	*			trans	-55.1	93.3	145.4	40.4	-24.1	0	0	0	106	K63 S67	K63-N65 PolarHBondContact O-N 2.75Å; K63-N65 PolarHBondContact O-OD1 2.73Å; N65-S67 PolarHBondContact O-N 3.17Å; N65-S67 PolarHBondContact O-OG 2.86Å
66	N	43.9	Very low	47.2	Very low	137 Å²	137	143.2 Å²	143.2	73%	0.733	76%	0.762	S	S	*	*			trans	-55.6	86.6	163.5	-65.7	-20.8	0	0	0	106.8	R64	R64-N66 PolarHBondContact O-N 2.93Å
67	S	43.1	Very low	46.8	Very low	95 Å²	95	143.5 Å²	143.5	66%	0.664	76%	0.761	S	S	*	*			trans	-127.6	8.2	172.8	52.8	0	0	0	0	111.2	N65 E69	N65-S67 PolarHBondContact O-N 3.17Å; N65-S67 PolarHBondContact O-OG 2.86Å; S67-E69 VanDerWaalsContact C-N 3.31Å
68	C	38.3	Very low	46.4	Very low	119 Å²	119	148.3 Å²	148.3	80%	0.804	77%	0.769	S	S	*	*			trans	-99.9	65.9	157	-162	0	0	0	0	107.5
69	E	38.4	Very low	45.5	Very low	153 Å²	153	152.9 Å²	152.9	72%	0.715	79%	0.792	S	S	*	*			trans	-67.4	125.5	158.2	-105.3	-179.2	113.8	0	0	107.8	S67	S67-E69 VanDerWaalsContact C-N 3.31Å
70	R	40.4	Very low	45.1	Very low	206 Å²	206	154.9 Å²	154.9	78%	0.777	79%	0.793	S	S	*	*			trans	64.3	72.2	143.1	-53.7	-176.1	75.9	-168	1	118.4
71	L	41.5	Very low	44.5	Very low	156 Å²	156	156.5 Å²	156.5	82%	0.817	81%	0.806	S	S	*	*	S	Bend	trans	-127.9	9.3	158.8	-72.9	179.8	0	0	0	115.5
72	N	38.8	Very low	44.1	Very low	163 Å²	163	158.4 Å²	158.4	87%	0.872	80%	0.803	S	S	*	*	S	Bend	trans	-128.4	31.4	-175.6	-68.7	-29.5	0	0	0	114.7
73	E	40.8	Very low	43.6	Very low	183 Å²	183	159.1 Å²	159.1	86%	0.855	81%	0.813	S	S	*	*	S	Bend	trans	-128.5	27.8	-179.3	-132.2	165.2	152.6	0	0	114.1
74	E	40.8	Very low	43.3	Very low	202 Å²	202	156.9 Å²	156.9	94%	0.944	81%	0.811	S	S	*	*	S	Bend	trans	-131	25.8	172.6	-98.5	-175.2	115.4	0	0	113.3
75	A	46.1	Very low	43.2	Very low	99 Å²	99	155.1 Å²	155.1	82%	0.818	82%	0.819	S	S	*	*	S	Bend	trans	-106.6	19	174.4	0	0	0	0	0	114
76	S	52.6	Low	43.2	Very low	105 Å²	105	156.9 Å²	156.9	73%	0.734	83%	0.828	S	S	*	*	S	Bend	trans	-135.4	132.6	175	-76.3	0	0	0	0	110.5
77	I	49.6	Very low	43.1	Very low	155 Å²	155	158.5 Å²	158.5	80%	0.795	84%	0.835	S	S	*	*			trans	97.1	87.5	174.6	-46.7	156.8	0	0	0	113.5
78	I	50.3	Low	43.1	Very low	172 Å²	172	163.8 Å²	163.8	88%	0.882	85%	0.849	S	S	*	*			trans	-121.6	122	139.3	-59.4	178.7	0	0	0	105.5
79	Q	39.5	Very low	43.5	Very low	252 Å²	252	167.8 Å²	167.8	100%	1.178	85%	0.853	S	S	*	*			trans	-66.6	0	175.4	-81.4	178.5	-89.6	0	0	112.2

Retrieved 79 of 79 residues in 62.8 ms (Link to these results)

U.S. Privacy Notice - Disclaimer / Registrations / Copyright Statement - Linking Policy - Notice of Privacy Practices (HIPAA) - Notice of Non‑Discrimination
© Copyright 2026 St. Jude Children's Research Hospital, a not-for-profit, section 501(c)(3).